LOCUS       NZ_JXBY01000000      2079016 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lactobacillus kullabergensis strain Biut2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JXBY00000000
VERSION     NZ_JXBY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03271965
            Assembly: GCF_000967195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactobacillus kullabergensis
  ORGANISM  Lactobacillus kullabergensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (bases 1 to 2079016)
  AUTHORS   Ellegaard,K.M., Tamarit,D., Javelind,E., Olofsson,T.,
            Andersson,S.G. and Vasquez,A.
  TITLE     Comparative genomics of the lactic acid bacteria isolated from the
            honey bee gut
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2079016)
  AUTHORS   Ellegaard,K.M., Tamarit,D., Javelind,E., Olofsson,T.,
            Andersson,S.G. and Vasquez,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2014) Institute of Cell and Molecular Biology,
            Husargatan 3, Uppsala 75236, Sweden
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JXBY00000000.1.
            The Lactobacillus kullabergensis whole genome shotgun (WGS) project
            has the project accession NZ_JXBY00000000.  This version of the
            project (01) has the accession number NZ_JXBY01000000, and consists
            of sequences JXBY01000001-JXBY01000037.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 2013
            Assembly Method       :: Newbler v. 2.6
            Genome Coverage       :: 142.0x
            Sequencing Technology :: 454; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000967195.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 09:57:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,011
            CDSs (total)                      :: 1,955
            Genes (coding)                    :: 1,936
            CDSs (with protein)               :: 1,936
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 50
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 19
            CDSs (without protein)            :: 19
            Pseudo Genes (ambiguous residues) :: 0 of 19
            Pseudo Genes (frameshifted)       :: 6 of 19
            Pseudo Genes (incomplete)         :: 14 of 19
            Pseudo Genes (internal stop)      :: 6 of 19
            Pseudo Genes (multiple problems)  :: 5 of 19
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2079016
                     /organism="Lactobacillus kullabergensis"
                     /mol_type="genomic DNA"
                     /strain="Biut2"
                     /isolation_source="gut"
                     /host="Apis mellifera"
                     /db_xref="taxon:1218493"
                     /geo_loc_name="Sweden: Jonstorp"
                     /collection_date="2008"
                     /collected_by="Alejandra Vasquez, Tobias Olofsson"
WGS         JXBY01000001-JXBY01000037
WGS_SCAFLD  NZ_KQ033870-NZ_KQ033876
//
LOCUS       NZ_CBBCFY010000000   3153199 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Hyphomonas sp. isolate
            PELAGICS-MAG-m2-bin112852-MEDDE-SM-14jul20., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBBCFY000000000
VERSION     NZ_CBBCFY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117450868
            Assembly: GCF_964851755.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Hyphomonas sp. (freshwater metagenome)
  ORGANISM  Hyphomonas sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomonadales; Hyphomonadaceae; Hyphomonas.
REFERENCE   1  (bases 1 to 3153199)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-JAN-2025) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBBCFY000000000.1.
            The Hyphomonas sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBBCFY000000000.  This version of the project
            (01) has the accession number NZ_CBBCFY010000000, and consists of
            sequences CBBCFY010000001-CBBCFY010000227.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964851755.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 02:14:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,270
            CDSs (total)                      :: 3,225
            Genes (coding)                    :: 3,151
            CDSs (with protein)               :: 3,151
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 5 of 74
            Pseudo Genes (incomplete)         :: 63 of 74
            Pseudo Genes (internal stop)      :: 9 of 74
            Pseudo Genes (multiple problems)  :: 3 of 74
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3153199
                     /organism="Hyphomonas sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-m2-bin112852-MEDDE-SM-14jul20."
                     /isolation_source="Medard lake"
                     /db_xref="taxon:87"
                     /environmental_sample
                     /geo_loc_name="Czechia"
                     /collection_date="2020-07-14"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBBCFY010000001-CBBCFY010000227
WGS_SCAFLD  NZ_CBBCFY010000001-NZ_CBBCFY010000227
//
LOCUS       NZ_ABYT01000000      2415920 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Holdemanella biformis DSM 3989, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ABYT00000000
VERSION     NZ_ABYT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00008825
            Assembly: GCF_000156655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Holdemanella biformis DSM 3989
  ORGANISM  Holdemanella biformis DSM 3989
            Bacteria; Bacillati; Bacillota; Erysipelotrichia;
            Erysipelotrichales; Erysipelotrichaceae; Holdemanella.
REFERENCE   1  (bases 1 to 2415920)
  AUTHORS   Sudarsanam,P., Ley,R., Guruge,J., Turnbaugh,P.J., Mahowald,M.,
            Liep,D. and Gordon,J.
  TITLE     Draft genome sequence of Eubacterium biforme (DSM 3989)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2415920)
  AUTHORS   Fulton,L., Clifton,S., Fulton,B., Xu,J., Minx,P., Pepin,K.H.,
            Johnson,M., Bhonagiri,V., Nash,W.E., Mardis,E.R. and Wilson,R.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-OCT-2008) Genome Sequencing Center, Washington
            University School of Medicine, 4444 Forest Park, St. Louis, MO
            63108, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ABYT00000000.1.
            The Holdemanella biformis DSM 3989 whole genome shotgun (WGS)
            project has the project accession NZ_ABYT00000000.  This version of
            the project (01) has the accession number NZ_ABYT01000000, and
            consists of sequences ABYT01000001-ABYT01000161.
            Eubacterium biforme (GenBank Accession Number for 16S rDNA gene:
            M59230) is a member of the Firmicutes division of the domain
            bacteria and has been isolated from human feces. The sequenced
            strain was obtained from the Deutsche Sammlung von Mikroorganismen
            und Zellkulturen GmbH (DSMZ) (DSM 3989).
            
            This is a Newbler assembly
            (http://www.454.com/enabling-technology/the-software.asp) comprised
            of 1/2 plate FLX PE 454 DATA with a Q20 coverage of 31.7X.
            
            This sequenced strain is part of a comprehensive, sequence-based
            survey of members of the normal human gut microbiota.  A joint
            effort of the WU-GSC and the Center for Genome Sciences at
            Washington University School of Medicine, the purpose of this
            survey is to provide the general scientific community with a broad
            view of the gene content of 100 representatives of the major
            divisions represented in the intestine's microbial community. This
            information should provide a frame of reference for analyzing
            metagenomic studies of the human gut microbiome. Further details of
            this effort are described in a white paper entitled 'Extending Our
            View of Self: the Human Gut Microbiome Initiative (HGMI)'
            (http://www.genome.gov/Pages/Research/Sequencing/SeqProposals/HGMIS
            eq.pdf). These studies are supported by National Human Genome
            Research Institute.
            
            Coding sequences were predicted using GeneMark v3.3 and Glimmer2
            v2.13. Intergenic regions not spanned by GeneMark and Glimmer2 were
            blasted against NCBI's non-redundant (NR)  database and predictions
            generated based on protein alignments. tRNA genes were determined
            using tRNAscan-SE 1.23 and non-coding RNA genes by RNAmmer-1.2 and
            Rfam v8.0. Gene names are generated at the contig level and may not
            necessarily reflect any known order or orientation between contigs.
            
            For answers to your questions regarding this assembly or project,
            or any other GSC genome project, please visit our Genome Groups web
            page (http://genome.wustl.edu/genome_group_index.cgi) and email the
            designated contact person.
            
            Annotation was added to the contigs in December 2008.
            
            This is a reference genome for the Human Microbiome Project. This
            project is co-owned with the Human Microbiome Project DACC.
            Product names were updated in June 2013.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000156655.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 09:53:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,481
            CDSs (total)                      :: 2,431
            Genes (coding)                    :: 2,401
            CDSs (with protein)               :: 2,401
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 30
            CDSs (without protein)            :: 30
            Pseudo Genes (ambiguous residues) :: 0 of 30
            Pseudo Genes (frameshifted)       :: 3 of 30
            Pseudo Genes (incomplete)         :: 26 of 30
            Pseudo Genes (internal stop)      :: 2 of 30
            Pseudo Genes (multiple problems)  :: 1 of 30
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2415920
                     /organism="Holdemanella biformis DSM 3989"
                     /mol_type="genomic DNA"
                     /strain="DSM 3989"
                     /isolation_source="biological product [ENVO:02000043]"
                     /host="Homo sapiens"
                     /culture_collection="DSM:3989"
                     /type_material="type strain of Eubacterium biforme"
                     /db_xref="taxon:518637"
WGS         ABYT01000001-ABYT01000161
WGS_SCAFLD  NZ_DS996836-NZ_DS996879
//
LOCUS       NZ_AHOC02000000      4317431 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira kirschneri serovar Valbuzzi str. 200702274, whole genome
            shotgun sequencing project.
ACCESSION   NZ_AHOC00000000
VERSION     NZ_AHOC00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02436380
            Assembly: GCF_000244515.1
KEYWORDS    WGS; HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Leptospira kirschneri serovar Valbuzzi str. 200702274
  ORGANISM  Leptospira kirschneri serovar Valbuzzi str. 200702274
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4317431)
  AUTHORS   Harkins,D.M., Durkin,A.S., Brinkac,L.M., Selengut,J.D., Sanka,R.,
            DePew,J., Purushe,J., Picardeau,M., Werts,C., Goarant,C.,
            Vinetz,J.M., Sutton,G.G., Nelson,W.C. and Fouts,D.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-OCT-2012) J. Craig Venter Institute, 9704 Medical
            Center Drive, Rockville, MD 20850, USA
REFERENCE   2  (bases 1 to 4317431)
  AUTHORS   Picardeau,M., Werts,C., Goarant,C., Harkins,D.M., Purushe,J.,
            Sanka,R.K., Selengut,J., Sutton,G., Vinetz,J.M. and Fouts,D.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-OCT-2011) The J. Craig Venter Institute, 9704 Medical
            Center Dr., Rockville, MD 20850, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHOC00000000.2.
            The Leptospira kirschneri serovar Valbuzzi str. 200702274 whole
            genome shotgun (WGS) project has the project accession
            NZ_AHOC00000000.  This version of the project (02) has the
            accession number NZ_AHOC02000000, and consists of sequences
            AHOC02000001-AHOC02000022.
            This strain is part of the Leptospira Genomics and Human Health
            project as part of the Genome Sequencing Centers for Infectious
            Diseases contract.
            http://gsc.jcvi.org/projects/gsc/leptospira/index.shtml.
            
            Source DNA and/or bacteria are available from the BEI Resource
            repository.  http://beiresources.org
            
            This project has been funded in whole or in part with federal funds
            from the National Institute of Allergy and Infectious Diseases,
            National Institutes of Health, Department of Health and Human
            Services through the Genomic Sequencing Centers for Infectious
            Diseases under contract number HHSN272200900007C.
            
            Annotation was updated on the contigs in March 2013.
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: High-Quality Draft
            Current Finishing Status :: High-Quality Draft
            Assembly Method          :: Celera Assembler v. 7.0
            Assembly Name            :: Lkirs200702274v2.0
            Genome Coverage          :: 61x
            Sequencing Technology    :: 454; Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000244515.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:01:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,605
            CDSs (total)                      :: 3,561
            Genes (coding)                    :: 3,375
            CDSs (with protein)               :: 3,375
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 2, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 37
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 128 of 186
            Pseudo Genes (incomplete)         :: 74 of 186
            Pseudo Genes (internal stop)      :: 30 of 186
            Pseudo Genes (multiple problems)  :: 42 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4317431
                     /organism="Leptospira kirschneri serovar Valbuzzi str.
                     200702274"
                     /mol_type="genomic DNA"
                     /strain="200702274"
                     /serovar="Valbuzzi"
                     /host="Homo sapiens"
                     /db_xref="taxon:1049968"
                     /geo_loc_name="France"
WGS         AHOC02000001-AHOC02000022
WGS_SCAFLD  NZ_AHOC02000001-NZ_AHOC02000022
//
LOCUS       NZ_ACCF01000000      3803745 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Holdemania filiformis DSM 12042, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ACCF00000000
VERSION     NZ_ACCF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00008830
            Assembly: GCF_000157995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Holdemania filiformis DSM 12042
  ORGANISM  Holdemania filiformis DSM 12042
            Bacteria; Bacillati; Bacillota; Erysipelotrichia;
            Erysipelotrichales; Erysipelotrichaceae; Holdemania.
REFERENCE   1  (bases 1 to 3803745)
  AUTHORS   Sudarsanam,P., Ley,R., Guruge,J., Turnbaugh,P.J., Mahowald,M.,
            Liep,D. and Gordon,J.
  TITLE     Draft genome sequence of Holdemania filiformis DSM 12042
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3803745)
  AUTHORS   Fulton,L., Clifton,S., Fulton,B., Xu,J., Minx,P., Pepin,K.H.,
            Johnson,M., Bhonagiri,V., Nash,W.E., Mardis,E.R. and Wilson,R.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-DEC-2008) Genome Sequencing Center, Washington
            University School of Medicine, 4444 Forest Park, St. Louis, MO
            63108, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ACCF00000000.1.
            The Holdemania filiformis DSM 12042 whole genome shotgun (WGS)
            project has the project accession NZ_ACCF00000000.  This version of
            the project (01) has the accession number NZ_ACCF01000000, and
            consists of sequences ACCF01000001-ACCF01000289.
            Holdemania filiformis (GenBank Accession Number for 16S rDNA gene:
            Y11466) is a member of the Firmicutes division of the domain
            bacteria and has been isolated from human feces. The sequenced
            strain was obtained from Deutsche Sammlung von Mikroorganismen und
            Zellkulturen GmbH (DSMZ) (DSM 12042).
            
            This is a Newbler assembly
            (http://www.454.com/enabling-technology/the-software.asp) comprised
            of 1/2 plate FLX PE 454 Data with a Q20 coverage of 18.2X.
            
            This sequenced strain is part of a comprehensive, sequence-based
            survey of members of the normal human gut microbiota.  A joint
            effort of the WU-GSC and the Center for Genome Sciences at
            Washington University School of Medicine, the purpose of this
            survey is to provide the general scientific community with a broad
            view of the gene content of 100 representatives of the major
            divisions represented in the intestine's microbial community. This
            information should provide a frame of reference for analyzing
            metagenomic studies of the human gut microbiome. Further details of
            this effort are described in a white paper entitled 'Extending Our
            View of Self: the Human Gut Microbiome Initiative (HGMI)'
            (http://www.genome.gov/Pages/Research/Sequencing/SeqProposals/HGMIS
            eq.pdf). These studies are supported by National Human Genome
            Research Institute.
            
            Coding sequences were predicted using GeneMark v3.3 and Glimmer2
            v2.13. Intergenic regions not spanned by GeneMark and Glimmer2 were
            blasted against NCBI's non-redundant (NR) database and predictions
            generated based on protein alignments. tRNA genes were determined
            using tRNAscan-SE 1.23 and non-coding RNA genes by RNAmmer-1.2 and
            Rfam v8.0. Gene names are generated at the contig level and may not
            necessarily reflect any known order or orientation between contigs.
            
            For answers to your questions regarding this assembly or project,
            or any other GSC genome project, please visit our Genome Groups web
            page (http://genome.wustl.edu/genome_group_index.cgi) and email the
            designated contact person.
            
            This is a reference genome for the Human Microbiome Project. This
            project is co-owned with the Human Microbiome Project DACC.
            Product names were updated in June 2013.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000157995.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 09:57:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,686
            CDSs (total)                      :: 3,634
            Genes (coding)                    :: 3,586
            CDSs (with protein)               :: 3,586
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 6 of 48
            Pseudo Genes (incomplete)         :: 42 of 48
            Pseudo Genes (internal stop)      :: 4 of 48
            Pseudo Genes (multiple problems)  :: 4 of 48
            CRISPR Arrays                     :: 6
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3803745
                     /organism="Holdemania filiformis DSM 12042"
                     /mol_type="genomic DNA"
                     /strain="DSM 12042"
                     /isolation_source="biological product [ENVO:02000043]"
                     /host="Homo sapiens"
                     /culture_collection="DSM:12042"
                     /type_material="type strain of Holdemania filiformis"
                     /db_xref="taxon:545696"
WGS         ACCF01000001-ACCF01000289
WGS_SCAFLD  NZ_GG657551-NZ_GG657585
//
LOCUS       NZ_AHMT02000000      4223825 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira alexanderi serovar Manhao 3 str. L 60, whole genome
            shotgun sequencing project.
ACCESSION   NZ_AHMT00000000
VERSION     NZ_AHMT00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02436435
            Assembly: GCF_000243815.2
KEYWORDS    WGS; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Leptospira alexanderi serovar Manhao 3 str. L 60
  ORGANISM  Leptospira alexanderi serovar Manhao 3 str. L 60
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4223825)
  AUTHORS   Harkins,D.M., Durkin,A.S., Brinkac,L.M., Haft,D.H., Selengut,J.D.,
            Sanka,R., DePew,J., Purushe,J., Hartskeerl,R.A., Ahmed,A., van der
            Linden,H., Goris,M.G.A., Vinetz,J.M., Sutton,G.G., Nierman,W.C. and
            Fouts,D.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2013) J. Craig Venter Institute, 9704 Medical
            Center Drive, Rockville, MD 20850, USA
REFERENCE   2  (bases 1 to 4223825)
  AUTHORS   Hartskeerl,R.A., Ahmed,A., Linden,H., Goris,M., Harkins,D.M.,
            Purushe,J., Sanka,R.K., Selengut,J., Sutton,G., Vinetz,J.M. and
            Fouts,D.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-OCT-2011) The J. Craig Venter Institute, 9704 Medical
            Center Dr., Rockville, MD 20850, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHMT00000000.2.
            
            On Sep 3, 2013 this sequence version replaced NZ_AHMT00000000.1.
            The Leptospira alexanderi serovar Manhao 3 str. L 60 whole genome
            shotgun (WGS) project has the project accession NZ_AHMT00000000.
            This version of the project (02) has the accession number
            NZ_AHMT02000000, and consists of sequences
            AHMT02000001-AHMT02000065.
            This strain is part of the Leptospira Genomics and Human Health
            project as part of the Genome Sequencing Centers for Infectious
            Diseases contract.
            http://gsc.jcvi.org/projects/gsc/leptospira/index.shtml.
            
            Source DNA and/or bacteria are available from the BEI Resource
            repository.  http://beiresources.org
            
            This project has been funded in whole or in part with federal funds
            from the National Institute of Allergy and Infectious Diseases,
            National Institutes of Health, Department of Health and Human
            Services through the Genomic Sequencing Centers for Infectious
            Diseases under contract number HHSN272200900007C.
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: Celera Assembler v. 7.0
            Assembly Name            :: gls454062v02
            Long Assembly Name       :: Leptospira alexanderi serovar Manhao 3
                                        str. L 60 v02
            Genome Coverage          :: 58.1x
            Sequencing Technology    :: 454 GS-FLX Titanium; Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000243815.2-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:09:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,949
            CDSs (total)                      :: 3,904
            Genes (coding)                    :: 3,438
            CDSs (with protein)               :: 3,438
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 466
            CDSs (without protein)            :: 466
            Pseudo Genes (ambiguous residues) :: 0 of 466
            Pseudo Genes (frameshifted)       :: 339 of 466
            Pseudo Genes (incomplete)         :: 227 of 466
            Pseudo Genes (internal stop)      :: 78 of 466
            Pseudo Genes (multiple problems)  :: 150 of 466
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4223825
                     /organism="Leptospira alexanderi serovar Manhao 3 str. L
                     60"
                     /mol_type="genomic DNA"
                     /strain="L 60"
                     /serovar="Manhao 3"
                     /host="Homo sapiens"
                     /type_material="type strain of Leptospira alexanderi"
                     /db_xref="taxon:1049759"
                     /geo_loc_name="China: Yunnan provice"
WGS         AHMT02000001-AHMT02000065
WGS_SCAFLD  NZ_AHMT02000001-NZ_AHMT02000065
//
LOCUS       NZ_AKPF01000000      1623667 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Helicobacter pylori Hp H-21, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AKPF00000000
VERSION     NZ_AKPF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00778855
            Assembly: GCF_000274185.2
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori Hp H-21
  ORGANISM  Helicobacter pylori Hp H-21
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1623667)
  AUTHORS   Blanchard,T.G., Czinn,S.J., Correa,P., Nakazawa,T., Keelan,M.,
            Morningstar,L., Santana-Cruz,I., Maroo,A., McCracken,C.,
            Shefchek,K., Daugherty,S., Song,Y., Fraser,C.M. and Fricke,W.F.
  TITLE     Genome sequences of 65 Helicobacter pylori strains isolated from
            asymptomatic individuals and patients with gastric cancer, peptic
            ulcer disease, or gastritis
  JOURNAL   Pathog Dis 68 (2), 39-43 (2013)
   PUBMED   23661595
REFERENCE   2  (bases 1 to 1623667)
  AUTHORS   Blanchard,T.G., Czinn,S.J., McCracken,C., Abolude,K., Maroo,A.,
            Santana-Cruz,I., Tallon,L.J. and Ficke,F.W.F.
  TITLE     Genome sequence of Helicobacter pylori Hp H-21
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 1623667)
  AUTHORS   Blanchard,T.G., Czinn,S.J., McCracken,C.L., Abolude,K., Maroo,A.,
            Santana-Cruz,I., Tallon,L.J. and Ficke,F.W.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2012) Institute for Genome Sciences, University
            of Maryland School of Medicine, 801 W. Baltimore St, Baltimore, MD
            21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AKPF00000000.1.
            
            On Nov 9, 2015 this sequence version replaced gi:420476467.
            The Helicobacter pylori Hp H-21 whole genome shotgun (WGS) project
            has the project accession NZ_AKPF00000000.  This version of the
            project (01) has the accession number NZ_AKPF01000000, and consists
            of sequences AKPF01000001-AKPF01000006.
            Samples deposited at Biodefense and  Emerging Infections Research
            Resources Repository (BEI resources).
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Celera Assembler v. 6.1
            Genome Coverage       :: 63.92x
            Sequencing Technology :: Illumina;454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000274185.2-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 09:55:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,564
            CDSs (total)                      :: 1,516
            Genes (coding)                    :: 1,447
            CDSs (with protein)               :: 1,447
            Genes (RNA)                       :: 48
            rRNAs                             :: 3, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 44 of 69
            Pseudo Genes (incomplete)         :: 20 of 69
            Pseudo Genes (internal stop)      :: 17 of 69
            Pseudo Genes (multiple problems)  :: 11 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1623667
                     /organism="Helicobacter pylori Hp H-21"
                     /mol_type="genomic DNA"
                     /strain="Hp H-21"
                     /host="Homo sapiens"
                     /db_xref="taxon:992067"
                     /geo_loc_name="USA: Cleveland, OH"
WGS         AKPF01000001-AKPF01000006
WGS_SCAFLD  NZ_AKPF01000001-NZ_AKPF01000006
//
LOCUS       NZ_JDFQ01000000      2897032 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus rhamnosus PEL5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JDFQ00000000
VERSION     NZ_JDFQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02602920
            Assembly: GCF_000712505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus PEL5
  ORGANISM  Lacticaseibacillus rhamnosus PEL5
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 2897032)
  AUTHORS   Kant,R., Rintahaka,J., Yu,X., Sigvart-Mattila,P., Paulin,L.,
            Mecklin,J.P., Saarela,M., Palva,A. and von Ossowski,I.
  TITLE     A comparative pan-genome perspective of niche-adaptable
            cell-surface protein phenotypes in Lactobacillus rhamnosus
  JOURNAL   PLoS One 9 (7), e102762 (2014)
   PUBMED   25032833
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2897032)
  AUTHORS   Kant,R., Paulin,L., Palva,A. and Ossowski,Iv.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-FEB-2014) Department of Veterinary Biosciences,
            Faculty of Veterinary Medicine, Helsinki University, Mustialankatu
            1, Helsinki, Helsinki 00014, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JDFQ00000000.1.
            The Lacticaseibacillus rhamnosus PEL5 whole genome shotgun (WGS)
            project has the project accession NZ_JDFQ00000000.  This version of
            the project (01) has the accession number NZ_JDFQ01000000, and
            consists of sequences JDFQ01000001-JDFQ01000071.
            Bacteria and source DNA available from: Airi Palva, Department of
            Veterinary Biosciences, Faculty of Veterinary Medicine, Helsinki
            University, Mustialankatu 1, Helsinki, Helsinki 00014, Finland.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Newbler v. 2.8
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000712505.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:08:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,729
            CDSs (total)                      :: 2,681
            Genes (coding)                    :: 2,619
            CDSs (with protein)               :: 2,619
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 38 of 62
            Pseudo Genes (incomplete)         :: 21 of 62
            Pseudo Genes (internal stop)      :: 7 of 62
            Pseudo Genes (multiple problems)  :: 3 of 62
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2897032
                     /organism="Lacticaseibacillus rhamnosus PEL5"
                     /mol_type="genomic DNA"
                     /strain="PEL5"
                     /db_xref="taxon:1457395"
WGS         JDFQ01000001-JDFQ01000071
WGS_SCAFLD  NZ_JDFQ01000001-NZ_JDFQ01000071
//
LOCUS       NZ_AFNK01000000      2143543 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus sputorum CCUG 13788, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AFNK00000000
VERSION     NZ_AFNK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02393707
            Assembly: GCF_000238795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus sputorum CCUG 13788
  ORGANISM  Haemophilus sputorum CCUG 13788
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (bases 1 to 2143543)
  AUTHORS   Norskov-Lauritsen,N., Gupta,V., Fenger,M.G. and Hansen,L.H.
  TITLE     Draft genome of Haemophilus sputorum sp. nov. reveals a complete
            capsule biosynthesis gene cluster with high similarity to the
            capsule polysaccharide locus present in encapsulated strains of
            Haemophilus influenzae
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2143543)
  AUTHORS   Norskov-Lauritsen,N. and Gupta,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-APR-2011) Bioinformatics Research Center, Aarhus
            University, C.F. Mollers Alle 8, Aarhus 8000, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AFNK00000000.1.
            The Haemophilus sputorum CCUG 13788 whole genome shotgun (WGS)
            project has the project accession NZ_AFNK00000000.  This version of
            the project (01) has the accession number NZ_AFNK01000000, and
            consists of sequences AFNK01000001-AFNK01000087.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler Metrics v. 2.3
            Genome Coverage       :: 77x
            Sequencing Technology :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000238795.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 09:51:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,123
            CDSs (total)                      :: 2,068
            Genes (coding)                    :: 2,034
            CDSs (with protein)               :: 2,034
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 7 of 34
            Pseudo Genes (incomplete)         :: 25 of 34
            Pseudo Genes (internal stop)      :: 3 of 34
            Pseudo Genes (multiple problems)  :: 1 of 34
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143543
                     /organism="Haemophilus sputorum CCUG 13788"
                     /mol_type="genomic DNA"
                     /strain="CCUG 13788"
                     /host="Homo sapiens"
                     /type_material="type strain of Haemophilus sputorum"
                     /db_xref="taxon:1035839"
                     /geo_loc_name="Denmark: Aarhus University Hospital Skejby"
WGS         AFNK01000001-AFNK01000087
WGS_SCAFLD  NZ_AFNK01000001-NZ_AFNK01000087
//
LOCUS       NZ_AMOV01000000      1632757 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Helicobacter pylori R038b, whole genome shotgun sequencing project.
ACCESSION   NZ_AMOV00000000
VERSION     NZ_AMOV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00997709
            Assembly: GCF_000299755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori R038b
  ORGANISM  Helicobacter pylori R038b
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1632757)
  AUTHORS   Blanchard,T.G., Czinn,S.J., Correa,P., Nakazawa,T., Keelan,M.,
            Morningstar,L., Santana-Cruz,I., Maroo,A., McCracken,C.,
            Shefchek,K., Daugherty,S., Song,Y., Fraser,C.M. and Fricke,W.F.
  TITLE     Genome sequences of 65 Helicobacter pylori strains isolated from
            asymptomatic individuals and patients with gastric cancer, peptic
            ulcer disease, or gastritis
  JOURNAL   Pathog Dis 68 (2), 39-43 (2013)
   PUBMED   23661595
REFERENCE   2  (bases 1 to 1632757)
  AUTHORS   Blanchard,T.G., Czinn,S.J., McCracken,C.M., Abolude,K.A.,
            Shefchek,K.S., Maroo,A.M., Santana-Cruz,I.S., Tallon,L.J. and
            Ficke,F.W.F.
  TITLE     Comparative Sequence Analysis of H. pylori isolates
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 1632757)
  AUTHORS   Blanchard,T.G., Czinn,S.J., McCracken,C.M., Abolude,K.A.,
            Shefchek,K.S., Maroo,A.M., Santana-Cruz,I.C., Tallon,L.J. and
            Ficke,F.W.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-AUG-2012) Institute for Genome Sciences, University
            of Maryland School of Medicine, 801 W. Baltimore St, Baltimore, MD
            21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AMOV00000000.1.
            The Helicobacter pylori R038b whole genome shotgun (WGS) project
            has the project accession NZ_AMOV00000000.  This version of the
            project (01) has the accession number NZ_AMOV01000000, and consists
            of sequences AMOV01000001-AMOV01000014.
            Bacterial source available from the Biodefense and Emerging
            Infections Research Resources Repository.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Celera Assembler v. 7.0
            Genome Coverage       :: 46x 454; 20x Illumina
            Sequencing Technology :: Illumina; 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000299755.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 09:53:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,561
            CDSs (total)                      :: 1,512
            Genes (coding)                    :: 1,441
            CDSs (with protein)               :: 1,441
            Genes (RNA)                       :: 49
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 44 of 71
            Pseudo Genes (incomplete)         :: 26 of 71
            Pseudo Genes (internal stop)      :: 7 of 71
            Pseudo Genes (multiple problems)  :: 6 of 71
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1632757
                     /organism="Helicobacter pylori R038b"
                     /mol_type="genomic DNA"
                     /strain="R038b"
                     /host="Homo sapiens"
                     /db_xref="taxon:1145115"
                     /geo_loc_name="Canada"
WGS         AMOV01000001-AMOV01000014
WGS_SCAFLD  NZ_AMOV01000001-NZ_AMOV01000014
//
LOCUS       NZ_AHMP02000000      4418431 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira kmetyi serovar Malaysia str. Bejo-Iso9, whole genome
            shotgun sequencing project.
ACCESSION   NZ_AHMP00000000
VERSION     NZ_AHMP00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02436507
            Assembly: GCF_000243735.2
KEYWORDS    WGS; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Leptospira kmetyi serovar Malaysia str. Bejo-Iso9
  ORGANISM  Leptospira kmetyi serovar Malaysia str. Bejo-Iso9
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4418431)
  AUTHORS   Harkins,D.M., Durkin,A.S., Selengut,J.D., Sanka,R., DePew,J.,
            Purushe,J., Ahmed,A., van der Linden,H., Goris,M.G.A.,
            Hartskeerl,R.A., Vinetz,J.M., Sutton,G.G., Nelson,W.C. and
            Fouts,D.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2013) J. Craig Venter Institute, 9704 Medical
            Center Drive, Rockville, MD 20850, USA
REFERENCE   2  (bases 1 to 4418431)
  AUTHORS   Hartskeerl,R.A., Ahmed,A., Linden,H., Goris,M., Harkins,D.M.,
            Purushe,J., Sanka,R.K., Selengut,J., Sutton,G., Vinetz,J.M. and
            Fouts,D.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-OCT-2011) The J. Craig Venter Institute, 9704 Medical
            Center Dr., Rockville, MD 20850, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHMP00000000.2.
            
            On Sep 3, 2013 this sequence version replaced NZ_AHMP00000000.1.
            The Leptospira kmetyi serovar Malaysia str. Bejo-Iso9 whole genome
            shotgun (WGS) project has the project accession NZ_AHMP00000000.
            This version of the project (02) has the accession number
            NZ_AHMP02000000, and consists of sequences
            AHMP02000001-AHMP02000004.
            This strain is part of the Leptospira Genomics and Human Health
            project as part of the Genome Sequencing Centers for Infectious
            Diseases contract.
            http://gsc.jcvi.org/projects/gsc/leptospira/index.shtml.
            
            This project has been funded in whole or in part with federal funds
            from the National Institute of Allergy and Infectious Diseases,
            National Institutes of Health, Department of Health and Human
            Services through the Genomic Sequencing Centers for Infectious
            Diseases under contract number HHSN272200900007C.
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: Celera Assembler v. 7.0
            Assembly Name            :: gls454052v1.0
            Long Assembly Name       :: Leptospira kmetyi str. Bejo-Iso9 v1.0
            Genome Coverage          :: 57.2x
            Sequencing Technology    :: 454 GS-FLX Titanium; Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000243735.2-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:20:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,044
            CDSs (total)                      :: 3,997
            Genes (coding)                    :: 3,933
            CDSs (with protein)               :: 3,933
            Genes (RNA)                       :: 47
            rRNAs                             :: 2, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 23 of 64
            Pseudo Genes (incomplete)         :: 38 of 64
            Pseudo Genes (internal stop)      :: 13 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4418431
                     /organism="Leptospira kmetyi serovar Malaysia str.
                     Bejo-Iso9"
                     /mol_type="genomic DNA"
                     /strain="Bejo-Iso9"
                     /serovar="Malaysia"
                     /type_material="type strain of Leptospira kmetyi"
                     /db_xref="taxon:1049970"
                     /geo_loc_name="Malaysia: Johor"
WGS         AHMP02000001-AHMP02000004
WGS_SCAFLD  NZ_AHMP02000001-NZ_AHMP02000004
//
LOCUS       NZ_CALK01000000      3757316 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Holdemania massiliensis AP2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CALK00000000
VERSION     NZ_CALK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2272076
            Assembly: GCF_000327285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Holdemania massiliensis AP2
  ORGANISM  Holdemania massiliensis AP2
            Bacteria; Bacillati; Bacillota; Erysipelotrichia;
            Erysipelotrichales; Erysipelotrichaceae; Holdemania.
REFERENCE   1
  AUTHORS   Roux,V. and Raoult,D.
  TITLE     Holdemania massiliensis genome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3757316)
  AUTHORS   GENOMES,U.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JUL-2012) Fac de Medecine, URMITE, 27 Bd J Moulin,
            Marseille Cedex 05, F-13385, FRANCE
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CALK00000000.1.
            The Holdemania massiliensis AP2 whole genome shotgun (WGS) project
            has the project accession NZ_CALK00000000.  This version of the
            project (01) has the accession number NZ_CALK01000000, and consists
            of sequences CALK01000001-CALK01000066.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000327285.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:04:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,526
            CDSs (total)                      :: 3,473
            Genes (coding)                    :: 3,455
            CDSs (with protein)               :: 3,455
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 18
            CDSs (without protein)            :: 18
            Pseudo Genes (ambiguous residues) :: 0 of 18
            Pseudo Genes (frameshifted)       :: 5 of 18
            Pseudo Genes (incomplete)         :: 14 of 18
            Pseudo Genes (internal stop)      :: 1 of 18
            Pseudo Genes (multiple problems)  :: 2 of 18
            CRISPR Arrays                     :: 6
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3757316
                     /organism="Holdemania massiliensis AP2"
                     /mol_type="genomic DNA"
                     /strain="AP2"
                     /type_material="type strain of Holdemania massiliensis"
                     /db_xref="taxon:1211819"
WGS         CALK01000001-CALK01000066
WGS_SCAFLD  NZ_HE998567-NZ_HE998583
//
LOCUS       NZ_LDEJ01000000      2924051 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus paracasei strain Lc1542, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LDEJ00000000
VERSION     NZ_LDEJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03702539
            Assembly: GCF_001540885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 2924051)
  AUTHORS   Bouchard,D.S., Seridan,B., Saraoui,T., Rault,L., Germon,P.,
            Gonzalez-Moreno,C., Nader-Macias,F.M., Baud,D., Francois,P.,
            Chuat,V., Chain,F., Langella,P., Nicoli,J., Le Loir,Y. and Even,S.
  TITLE     Lactic Acid Bacteria Isolated from Bovine Mammary Microbiota:
            Potential Allies against Bovine Mastitis
  JOURNAL   PLoS One 10 (12), e0144831 (2015)
   PUBMED   26713450
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2924051)
  AUTHORS   Baud,D.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAY-2015) Genomic Research Laboratory Division of
            Infectious Diseases, Geneva University Hospitals, Rue
            Gabrielle-Perret-Gentil 4, Geneva, GE 1211, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LDEJ00000000.1.
            The Lacticaseibacillus paracasei whole genome shotgun (WGS) project
            has the project accession NZ_LDEJ00000000.  This version of the
            project (01) has the accession number NZ_LDEJ01000000, and consists
            of sequences LDEJ01000001-LDEJ01000086.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            The organism was changed from 'Lactobacillus casei' to
            'Lactobacillus paracasei' in October 2018.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_001540885.1
            Current Name        :: Lactobacillus paracasei
            Previous Name       :: Lactobacillus casei
            Date Updated        :: 2018-10-11
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_000829035.1
            A1 Name             :: Lactobacillus paracasei
            A1 ANI              :: 98.7635%
            A1 Query Coverage   :: 86.07%
            A1 Subject Coverage :: 83.4%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_000829055.1
            A2 Name             :: Lactobacillus casei
            A2 ANI              :: 83.31664%
            A2 Query Coverage   :: 19.51%
            A2 Subject Coverage :: 19.32%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2014
            Assembly Method        :: Edena v. OCT-2013
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 600.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001540885.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:01:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,889
            CDSs (total)                      :: 2,810
            Genes (coding)                    :: 2,711
            CDSs (with protein)               :: 2,711
            Genes (RNA)                       :: 79
            rRNAs                             :: 5, 5, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 5, 7 (16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 99
            CDSs (without protein)            :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 21 of 99
            Pseudo Genes (incomplete)         :: 76 of 99
            Pseudo Genes (internal stop)      :: 10 of 99
            Pseudo Genes (multiple problems)  :: 8 of 99
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2924051
                     /organism="Lacticaseibacillus paracasei"
                     /mol_type="genomic DNA"
                     /strain="Lc1542"
                     /isolation_source="teat canal"
                     /host="bovine"
                     /db_xref="taxon:1597"
                     /geo_loc_name="France"
                     /collection_date="2012"
WGS         LDEJ01000001-LDEJ01000086
WGS_SCAFLD  NZ_LDEJ01000001-NZ_LDEJ01000086
//
LOCUS       NZ_CBSQ010000000     1912114 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Kingella kingae Vir5453, whole genome shotgun sequencing project.
ACCESSION   NZ_CBSQ000000000
VERSION     NZ_CBSQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2272475
            Assembly: GCF_000470375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kingella kingae Vir5453
  ORGANISM  Kingella kingae Vir5453
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Kingella.
REFERENCE   1
  AUTHORS   Rouli,L., Yagupsky,P., Robert,C. and Raoult,D.
  TITLE     Pan-genome of Kingella kingae shows a lack of correlation between
            strains and pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1912114)
  AUTHORS   GENOMES,U.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2013) Fac de medecine, URMITE, 27 Bd J Moulin,
            13385 Marseille Cedex 05, FRANCE
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBSQ000000000.1.
            The Kingella kingae Vir5453 whole genome shotgun (WGS) project has
            the project accession NZ_CBSQ000000000.  This version of the
            project (01) has the accession number NZ_CBSQ010000000, and
            consists of sequences CBSQ010000001-CBSQ010000655.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000470375.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:06:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,991
            CDSs (total)                      :: 1,938
            Genes (coding)                    :: 1,806
            CDSs (with protein)               :: 1,806
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 132
            CDSs (without protein)            :: 132
            Pseudo Genes (ambiguous residues) :: 0 of 132
            Pseudo Genes (frameshifted)       :: 49 of 132
            Pseudo Genes (incomplete)         :: 90 of 132
            Pseudo Genes (internal stop)      :: 14 of 132
            Pseudo Genes (multiple problems)  :: 21 of 132
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1912114
                     /organism="Kingella kingae Vir5453"
                     /mol_type="genomic DNA"
                     /strain="Vir5453"
                     /db_xref="taxon:1305785"
WGS         CBSQ010000001-CBSQ010000655
WGS_SCAFLD  NZ_HG427488
//
LOCUS       NZ_MUXX01000000      2057182 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus paraphrohaemolyticus strain CCUG 3718, whole genome
            shotgun sequencing project.
ACCESSION   NZ_MUXX00000000
VERSION     NZ_MUXX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06308708
            Assembly: GCF_002015045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus paraphrohaemolyticus
  ORGANISM  Haemophilus paraphrohaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (bases 1 to 2057182)
  AUTHORS   Engstrom-Jakobsson,H., Salva-Serra,F., Thorell,K.,
            Gonzales-Siles,L., Karlsson,R., Boulund,F., Engstrand,L.,
            Kristiansson,E. and Moore,E.
  TITLE     Draft genome sequence of Haemophilus paraphrohaemolyticus CCUG 3718
            type strain
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2057182)
  AUTHORS   Engstrom-Jakobsson,H., Salva-Serra,F., Thorell,K.,
            Gonzales-Siles,L., Karlsson,R., Boulund,F., Engstrand,L.,
            Kristiansson,E. and Moore,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-FEB-2017) Infectious Diseases, University of
            Gothenburg - CCUG, Guldhedsgatan 10, Box 7193, Gothenburg, Vastra
            Gotaland 40234, Sweden
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MUXX00000000.1.
            The Haemophilus paraphrohaemolyticus whole genome shotgun (WGS)
            project has the project accession NZ_MUXX00000000.  This version of
            the project (01) has the accession number NZ_MUXX01000000, and
            consists of sequences MUXX01000001-MUXX01000029.
            Bacteria and source DNA available from CCUG.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 11-JAN-2017
            Assembly Method        :: CLC Genomic Workbench v. 9.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 83.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002015045.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:38:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,091
            CDSs (total)                      :: 2,032
            Genes (coding)                    :: 1,978
            CDSs (with protein)               :: 1,978
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 19 of 54
            Pseudo Genes (incomplete)         :: 37 of 54
            Pseudo Genes (internal stop)      :: 12 of 54
            Pseudo Genes (multiple problems)  :: 11 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2057182
                     /organism="Haemophilus paraphrohaemolyticus"
                     /mol_type="genomic DNA"
                     /strain="CCUG 3718"
                     /isolation_source="Sputum"
                     /host="Homo sapiens"
                     /culture_collection="CCUG:3718"
                     /type_material="type strain of Haemophilus
                     paraphrohaemolyticus"
                     /db_xref="taxon:736"
                     /geo_loc_name="United Kingdom: Leeds"
                     /collection_date="1970"
WGS         MUXX01000001-MUXX01000029
WGS_SCAFLD  NZ_MUXX01000001-NZ_MUXX01000029
//
LOCUS       NZ_NBTX02000000      4564423 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Legionella anisa strain FDAARGOS_200, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NBTX00000000
VERSION     NZ_NBTX00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04875537
            Assembly: GCF_002082905.2
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella anisa
  ORGANISM  Legionella anisa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 4564423)
  AUTHORS   Kerrigan,L., Tallon,L.J., Sadzewicz,L., Sengamalay,N., Ott,S.,
            Godinez,A., Nagaraj,S., Vavikolanu,K., Aluvathingal,J., Nadendla,S.
            and Sichtig,H.
  TITLE     FDA dAtabase for Regulatory Grade micrObial Sequences (FDA-ARGOS):
            Supporting development and validation of Infectious Disease Dx
            tests
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4564423)
  AUTHORS   Kerrigan,L., Tallon,L.J., Sadzewicz,L., Sengamalay,N., Ott,S.,
            Godinez,A., Nagaraj,S., Vavikolanu,K., Aluvathingal,J., Nadendla,S.
            and Sichtig,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-DEC-2017) Center for Devices and Radiological Health,
            US Food and Drug Administration, 10903 New Hampshire Avenue, Silver
            Spring, MD 20993-0002, USA
REFERENCE   3  (bases 1 to 4564423)
  AUTHORS   Kerrigan,L., Tallon,L., Sadzewicz,L., Sengamalay,N., Ott,S.,
            Godinez,A., Nagaraj,S., Nadendla,S., Geyer,C. and Sichtig,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2016) Institute for Genome Sciences, University
            of Maryland, 801 W.Baltimore Street, Baltimore, MD 21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NBTX00000000.2.
            
            On Jan 24, 2018 this sequence version replaced NZ_NBTX00000000.1.
            The Legionella anisa whole genome shotgun (WGS) project has the
            project accession NZ_NBTX00000000.  This version of the project
            (02) has the accession number NZ_NBTX02000000, and consists of
            sequences NBTX02000001-NBTX02000004.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CA v. 8.2
            Genome Coverage       :: 528x
            Sequencing Technology :: PacBio; Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002082905.2-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:20:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,145
            CDSs (total)                      :: 4,087
            Genes (coding)                    :: 4,018
            CDSs (with protein)               :: 4,018
            Genes (RNA)                       :: 58
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 25 of 69
            Pseudo Genes (incomplete)         :: 41 of 69
            Pseudo Genes (internal stop)      :: 10 of 69
            Pseudo Genes (multiple problems)  :: 7 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4564423
                     /organism="Legionella anisa"
                     /mol_type="genomic DNA"
                     /strain="FDAARGOS_200"
                     /isolation_source="Tap water from hospital sink"
                     /culture_collection="ATCC:35292D-5"
                     /culture_collection="FDA:FDAARGOS_200"
                     /type_material="type strain of Legionella anisa"
                     /db_xref="taxon:28082"
                     /geo_loc_name="USA: CA"
                     /collection_date="1980"
                     /collected_by="ATCC, GW Gorman"
WGS         NBTX02000001-NBTX02000004
WGS_SCAFLD  NZ_NBTX02000001-NZ_NBTX02000004
//
LOCUS       NZ_LQHH01000000      6148332 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella michiganensis strain UCD-JA29, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LQHH00000000
VERSION     NZ_LQHH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04378714
            Assembly: GCF_001583485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 6148332)
  AUTHORS   Alexiev,A., Coil,D.A., Jospin,G., Eisen,J.A. and Adams,J.Y.
  TITLE     Draft Genome Sequence of Klebsiella pneumoniae UCD-JA29 Isolated
            from a Patient with Sepsis
  JOURNAL   Genome Announc 4 (3), e00234-16 (2016)
   PUBMED   27151785
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6148332)
  AUTHORS   Adams,J.Y., Coil,D.A., Jospin,G., Eisen,J.A. and Alexiev,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JAN-2016) Genome Center, UC Davis, 451 Health Science
            Drive, Davis, CA 95616, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LQHH00000000.1.
            The Klebsiella michiganensis whole genome shotgun (WGS) project has
            the project accession NZ_LQHH00000000.  This version of the project
            (01) has the accession number NZ_LQHH01000000, and consists of
            sequences LQHH01000001-LQHH01000133.
            The organism was changed from 'Klebsiella pneumoniae' to
            'Klebsiella michiganensis' in July 2016.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_001583485.1
            Current Name        :: Klebsiella michiganensis
            Previous Name       :: Klebsiella pneumoniae
            Date Updated        :: 2016-07-08
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. PROXYTYPE genome for current name
            A1 Genome (subject) :: GCA_000633235.1
            A1 Name             :: Klebsiella michiganensis
            A1 ANI              :: 99.30924%
            A1 Query Coverage   :: 88%
            A1 Subject Coverage :: 93%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_000163455.1
            A2 Name             :: Klebsiella pneumoniae
            A2 ANI              :: 84.90063%
            A2 Query Coverage   :: 53%
            A2 Subject Coverage :: 62%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: A5 Assembly Pipeline v. June-2014
            Assembly Name          :: KlebPneuJA29
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 37.9x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001583485.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:44:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,908
            CDSs (total)                      :: 5,831
            Genes (coding)                    :: 5,722
            CDSs (with protein)               :: 5,722
            Genes (RNA)                       :: 77
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 38 of 109
            Pseudo Genes (incomplete)         :: 78 of 109
            Pseudo Genes (internal stop)      :: 14 of 109
            Pseudo Genes (multiple problems)  :: 17 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6148332
                     /organism="Klebsiella michiganensis"
                     /mol_type="genomic DNA"
                     /strain="UCD-JA29"
                     /host="Homo sapiens"
                     /db_xref="taxon:1134687"
                     /geo_loc_name="USA: Sacramento, CA"
                     /collection_date="2014"
WGS         LQHH01000001-LQHH01000133
WGS_SCAFLD  NZ_LQHH01000001-NZ_LQHH01000133
//
LOCUS       NZ_NPDL01000000      4051706 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira hartskeerlii strain MCA2-B-A3, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NPDL00000000
VERSION     NZ_NPDL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07411431
            Assembly: GCF_002811475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira hartskeerlii
  ORGANISM  Leptospira hartskeerlii
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4051706)
  AUTHORS   Thibeaux,R., Iraola,G., Ferres,I., Bierque,E., Girault,D.,
            Soupe-Gilbert,M.-E., Picardeau,M. and Goarant,C.
  TITLE     Leptospira spp. isolated from tropical soils
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4051706)
  AUTHORS   Thibeaux,R., Iraola,G., Ferres,I., Bierque,E., Girault,D.,
            Soupe-Gilbert,M.-E., Picardeau,M. and Goarant,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JUL-2017) Unidad de Bioinformatica, Institut Pasteur
            Montevideo, Mataojo 2020, Montevideo, Montevideo 11400, Uruguay
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NPDL00000000.1.
            The Leptospira hartskeerlii whole genome shotgun (WGS) project has
            the project accession NZ_NPDL00000000.  This version of the project
            (01) has the accession number NZ_NPDL01000000, and consists of
            sequences NPDL01000001-NPDL01000030.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.5
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 65x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002811475.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:23:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,757
            CDSs (total)                      :: 3,714
            Genes (coding)                    :: 3,697
            CDSs (with protein)               :: 3,697
            Genes (RNA)                       :: 43
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 17
            CDSs (without protein)            :: 17
            Pseudo Genes (ambiguous residues) :: 0 of 17
            Pseudo Genes (frameshifted)       :: 0 of 17
            Pseudo Genes (incomplete)         :: 17 of 17
            Pseudo Genes (internal stop)      :: 0 of 17
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4051706
                     /organism="Leptospira hartskeerlii"
                     /mol_type="genomic DNA"
                     /strain="MCA2-B-A3"
                     /isolation_source="soil"
                     /type_material="type strain of Leptospira hartskeerlii"
                     /db_xref="taxon:2023177"
                     /geo_loc_name="New Caledonia"
                     /collection_date="2016"
WGS         NPDL01000001-NPDL01000030
WGS_SCAFLD  NZ_NPDL01000001-NZ_NPDL01000030
//
LOCUS       NZ_NPDR01000000      4083319 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira saintgironsiae strain FH4-C-A2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NPDR00000000
VERSION     NZ_NPDR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07411425
            Assembly: GCF_002811765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira saintgironsiae
  ORGANISM  Leptospira saintgironsiae
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4083319)
  AUTHORS   Thibeaux,R., Iraola,G., Ferres,I., Bierque,E., Girault,D.,
            Soupe-Gilbert,M.-E., Picardeau,M. and Goarant,C.
  TITLE     Leptospira spp. isolated from tropical soils
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4083319)
  AUTHORS   Thibeaux,R., Iraola,G., Ferres,I., Bierque,E., Girault,D.,
            Soupe-Gilbert,M.-E., Picardeau,M. and Goarant,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JUL-2017) Unidad de Bioinformatica, Institut Pasteur
            Montevideo, Mataojo 2020, Montevideo, Montevideo 11400, Uruguay
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NPDR00000000.1.
            The Leptospira saintgironsiae whole genome shotgun (WGS) project
            has the project accession NZ_NPDR00000000.  This version of the
            project (01) has the accession number NZ_NPDR01000000, and consists
            of sequences NPDR01000001-NPDR01000042.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.5
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 33x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002811765.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:21:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,795
            CDSs (total)                      :: 3,754
            Genes (coding)                    :: 3,735
            CDSs (with protein)               :: 3,735
            Genes (RNA)                       :: 41
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 19
            CDSs (without protein)            :: 19
            Pseudo Genes (ambiguous residues) :: 0 of 19
            Pseudo Genes (frameshifted)       :: 3 of 19
            Pseudo Genes (incomplete)         :: 15 of 19
            Pseudo Genes (internal stop)      :: 2 of 19
            Pseudo Genes (multiple problems)  :: 1 of 19
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4083319
                     /organism="Leptospira saintgironsiae"
                     /mol_type="genomic DNA"
                     /strain="FH4-C-A2"
                     /isolation_source="soil"
                     /type_material="type strain of Leptospira saintgironsiae"
                     /db_xref="taxon:2023183"
                     /geo_loc_name="New Caledonia"
                     /collection_date="2016"
WGS         NPDR01000001-NPDR01000042
WGS_SCAFLD  NZ_NPDR01000001-NZ_NPDR01000042
//
LOCUS       NZ_JNBY01000000      8035179 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Kitasatospora cheerisanensis KCTC 2395, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JNBY00000000
VERSION     NZ_JNBY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02796068
            Assembly: GCF_000696185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kitasatospora cheerisanensis KCTC 2395
  ORGANISM  Kitasatospora cheerisanensis KCTC 2395
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Kitasatospora.
REFERENCE   1  (bases 1 to 8035179)
  AUTHORS   Hwang,J.Y., Kim,S.H., Oh,H.R., Cho,Y.J., Chun,J., Chung,Y.R. and
            Nam,D.H.
  TITLE     Draft Genome Sequence of Kitasatospora cheerisanensis KCTC 2395,
            Which Produces Plecomacrolide against Phytopathogenic Fungi
  JOURNAL   Genome Announc 2 (3), e00604-14 (2014)
   PUBMED   24948770
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8035179)
  AUTHORS   Hwang,J.Y., Kim,S.H., Cho,Y.-J. and Nam,D.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAY-2014) Chunlab Inc., Bldg 105-1, Suite #307, SNU,
            1 Gwanak-Ro, Gwanak-Gu, Seoul 151-742, Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JNBY00000000.1.
            The Kitasatospora cheerisanensis KCTC 2395 whole genome shotgun
            (WGS) project has the project accession NZ_JNBY00000000.  This
            version of the project (01) has the accession number
            NZ_JNBY01000000, and consists of sequences
            JNBY01000001-JNBY01000178.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 2014
            Assembly Method       :: Newbler v. 2.6; CLC Genomics Workbench v.
                                     6.5; PacBio SMRT Analysis v. 2.0
            Genome Coverage       :: 1056.0x
            Sequencing Technology :: Illumina MiSeq; 454; PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000696185.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:49:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,612
            CDSs (total)                      :: 7,521
            Genes (coding)                    :: 7,042
            CDSs (with protein)               :: 7,042
            Genes (RNA)                       :: 91
            rRNAs                             :: 5, 9 (5S, 16S)
            complete rRNAs                    :: 5, 9 (5S, 16S)
            tRNAs                             :: 74
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 479
            CDSs (without protein)            :: 479
            Pseudo Genes (ambiguous residues) :: 0 of 479
            Pseudo Genes (frameshifted)       :: 249 of 479
            Pseudo Genes (incomplete)         :: 248 of 479
            Pseudo Genes (internal stop)      :: 2 of 479
            Pseudo Genes (multiple problems)  :: 19 of 479
            CRISPR Arrays                     :: 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8035179
                     /organism="Kitasatospora cheerisanensis KCTC 2395"
                     /mol_type="genomic DNA"
                     /strain="KCTC 2395"
                     /isolation_source="soil"
                     /type_material="type strain of Kitasatospora
                     cheerisanensis"
                     /db_xref="taxon:1348663"
                     /geo_loc_name="South Korea: Mt. Cheeri"
                     /collection_date="1999"
WGS         JNBY01000001-JNBY01000178
WGS_SCAFLD  NZ_KK853997-NZ_KK854001
//
LOCUS       NZ_NPEG01000000      4191261 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira haakeii strain ATI7-C-A4, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NPEG00000000
VERSION     NZ_NPEG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07411410
            Assembly: GCF_002812045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira haakeii
  ORGANISM  Leptospira haakeii
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4191261)
  AUTHORS   Thibeaux,R., Iraola,G., Ferres,I., Bierque,E., Girault,D.,
            Soupe-Gilbert,M.-E., Picardeau,M. and Goarant,C.
  TITLE     Leptospira spp. isolated from tropical soils
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4191261)
  AUTHORS   Thibeaux,R., Iraola,G., Ferres,I., Bierque,E., Girault,D.,
            Soupe-Gilbert,M.-E., Picardeau,M. and Goarant,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JUL-2017) Unidad de Bioinformatica, Institut Pasteur
            Montevideo, Mataojo 2020, Montevideo, Montevideo 11400, Uruguay
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NPEG00000000.1.
            The Leptospira haakeii whole genome shotgun (WGS) project has the
            project accession NZ_NPEG00000000.  This version of the project
            (01) has the accession number NZ_NPEG01000000, and consists of
            sequences NPEG01000001-NPEG01000039.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.5
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 17x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002812045.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:26:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,872
            CDSs (total)                      :: 3,830
            Genes (coding)                    :: 3,803
            CDSs (with protein)               :: 3,803
            Genes (RNA)                       :: 42
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 1 of 27
            Pseudo Genes (incomplete)         :: 26 of 27
            Pseudo Genes (internal stop)      :: 0 of 27
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4191261
                     /organism="Leptospira haakeii"
                     /mol_type="genomic DNA"
                     /strain="ATI7-C-A4"
                     /isolation_source="soil"
                     /type_material="type strain of Leptospira haakeii"
                     /db_xref="taxon:2023198"
                     /geo_loc_name="New Caledonia"
                     /collection_date="2016"
WGS         NPEG01000001-NPEG01000039
WGS_SCAFLD  NZ_NPEG01000001-NZ_NPEG01000039
//
LOCUS       NZ_FOSB01000000      4137056 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Halobacillus dabanensis strain CGMCC 1.3704, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOSB00000000
VERSION     NZ_FOSB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04487936
            Assembly: GCF_900114165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Halobacillus dabanensis
  ORGANISM  Halobacillus dabanensis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Halobacillus.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOSB00000000.1.
            The Halobacillus dabanensis whole genome shotgun (WGS) project has
            the project accession NZ_FOSB00000000.  This version of the project
            (01) has the accession number NZ_FOSB01000000, and consists of
            sequences FOSB01000001-FOSB01000024.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900114165.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:05:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,167
            CDSs (total)                      :: 4,079
            Genes (coding)                    :: 4,025
            CDSs (with protein)               :: 4,025
            Genes (RNA)                       :: 88
            rRNAs                             :: 7, 6, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 2, 6, 4 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 30 of 54
            Pseudo Genes (incomplete)         :: 16 of 54
            Pseudo Genes (internal stop)      :: 13 of 54
            Pseudo Genes (multiple problems)  :: 5 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4137056
                     /organism="Halobacillus dabanensis"
                     /mol_type="genomic DNA"
                     /strain="CGMCC 1.3704"
                     /type_material="type strain of Halobacillus dabanensis"
                     /db_xref="taxon:240302"
WGS         FOSB01000001-FOSB01000024
WGS_SCAFLD  NZ_FOSB01000001-NZ_FOSB01000024
//
LOCUS       NZ_FOHM01000000      2948684 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Halanaerobium congolense strain WG6, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOHM00000000
VERSION     NZ_FOHM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04515653
            Assembly: GCF_900111505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Halanaerobium congolense
  ORGANISM  Halanaerobium congolense
            Bacteria; Bacillati; Bacillota; Clostridia; Halanaerobiales;
            Halanaerobiaceae; Halanaerobium.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOHM00000000.1.
            The Halanaerobium congolense whole genome shotgun (WGS) project has
            the project accession NZ_FOHM00000000.  This version of the project
            (01) has the accession number NZ_FOHM01000000, and consists of
            sequences FOHM01000001-FOHM01000056.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900111505.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:05:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,906
            CDSs (total)                      :: 2,840
            Genes (coding)                    :: 2,785
            CDSs (with protein)               :: 2,785
            Genes (RNA)                       :: 66
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 1, 4 (16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 55
            CDSs (without protein)            :: 55
            Pseudo Genes (ambiguous residues) :: 0 of 55
            Pseudo Genes (frameshifted)       :: 14 of 55
            Pseudo Genes (incomplete)         :: 44 of 55
            Pseudo Genes (internal stop)      :: 6 of 55
            Pseudo Genes (multiple problems)  :: 7 of 55
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2948684
                     /organism="Halanaerobium congolense"
                     /mol_type="genomic DNA"
                     /strain="WG6"
                     /db_xref="taxon:54121"
WGS         FOHM01000001-FOHM01000056
WGS_SCAFLD  NZ_FOHM01000001-NZ_FOHM01000056
//
LOCUS       NZ_QNXB01000000      1742687 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lactobacillus delbrueckii strain TJA31, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QNXB00000000
VERSION     NZ_QNXB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09604021
            Assembly: GCF_003545935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactobacillus delbrueckii
  ORGANISM  Lactobacillus delbrueckii
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (bases 1 to 1742687)
  AUTHORS   Cho,G.S., Cappello,C., Schrader,K., Fagbemigum,O.,
            Oguntoyinbo,F.A., Csovcsics,C., Rosch,N., Kabisch,J., Neve,H.,
            Bockelmann,W., Briviba,K., Modesto,M., Cilli,E., Mattarelli,P. and
            Franz,C.M.A.P.
  TITLE     Isolation and Characterization of Lactic Acid Bacteria from
            Fermented Goat Milk in Tajikistan
  JOURNAL   J Microbiol Biotechnol 28 (11), 1834-1845 (2018)
   PUBMED   30562882
REFERENCE   2  (bases 1 to 1742687)
  AUTHORS   Cho,G.-S., Cappello,C., Schrader,K., Fagbemigun,O.,
            Oguntoyinbo,F.A., Csovcsics,C., Roesch,N., Kabisch,J., Neve,H.,
            Bockelmann,W., Briviba,K., Modesto,M., Cilli,E., Mattarelli,P. and
            Franz,C.M.A.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUL-2018) Microbiology and Biotechnology, Max
            Rubner-Institut, Hermann-Weigmann-Str. 1, Kiel 24103, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QNXB00000000.1.
            The Lactobacillus delbrueckii whole genome shotgun (WGS) project
            has the project accession NZ_QNXB00000000.  This version of the
            project (01) has the accession number NZ_QNXB01000000, and consists
            of sequences QNXB01000001-QNXB01000054.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 101x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003545935.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:52:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,866
            CDSs (total)                      :: 1,788
            Genes (coding)                    :: 1,628
            CDSs (with protein)               :: 1,628
            Genes (RNA)                       :: 78
            rRNAs                             :: 3, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 160
            CDSs (without protein)            :: 160
            Pseudo Genes (ambiguous residues) :: 0 of 160
            Pseudo Genes (frameshifted)       :: 84 of 160
            Pseudo Genes (incomplete)         :: 80 of 160
            Pseudo Genes (internal stop)      :: 43 of 160
            Pseudo Genes (multiple problems)  :: 43 of 160
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1742687
                     /organism="Lactobacillus delbrueckii"
                     /mol_type="genomic DNA"
                     /strain="TJA31"
                     /isolation_source="fermented goat milk"
                     /db_xref="taxon:1584"
                     /geo_loc_name="Tajikistan"
                     /collection_date="2014-09-01"
                     /collected_by="Prof. Antonio Panaino"
WGS         QNXB01000001-QNXB01000054
WGS_SCAFLD  NZ_QNXB01000001-NZ_QNXB01000054
//
LOCUS       NZ_RBFG01000000      3346080 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Legionella pneumophila strain NMB001740, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RBFG00000000
VERSION     NZ_RBFG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10142137
            Assembly: GCF_004169765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella pneumophila
  ORGANISM  Legionella pneumophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3346080)
  AUTHORS   Wuthrich,D., Gautsch,S., Spieler-Denz,R., Dubuis,O., Gaia,V.,
            Moran-Gilad,J., Hinic,V., Seth-Smith,H.M., Nickel,C.H.,
            Tschudin-Sutter,S., Bassetti,S., Haenggi,M., Brodmann,P., Fuchs,S.
            and Egli,A.
  TITLE     Air-conditioner cooling towers as complex reservoirs and continuous
            source of Legionella pneumophila infection evidenced by a genomic
            analysis study in 2017, Switzerland
  JOURNAL   Euro Surveill 24 (4) (2019)
   PUBMED   30696527
REFERENCE   2  (bases 1 to 3346080)
  AUTHORS   Wuthrich,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2018) Clinical Microbiology, University Hospital
            Basel, Petersgraben 4, Basel 4031, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RBFG00000000.1.
            The Legionella pneumophila whole genome shotgun (WGS) project has
            the project accession NZ_RBFG00000000.  This version of the project
            (01) has the accession number NZ_RBFG01000000, and consists of
            sequences RBFG01000001-RBFG01000030.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 188x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004169765.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:08:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,004
            CDSs (total)                      :: 2,953
            Genes (coding)                    :: 2,934
            CDSs (with protein)               :: 2,934
            Genes (RNA)                       :: 51
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 19
            CDSs (without protein)            :: 19
            Pseudo Genes (ambiguous residues) :: 0 of 19
            Pseudo Genes (frameshifted)       :: 6 of 19
            Pseudo Genes (incomplete)         :: 15 of 19
            Pseudo Genes (internal stop)      :: 1 of 19
            Pseudo Genes (multiple problems)  :: 2 of 19
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3346080
                     /organism="Legionella pneumophila"
                     /mol_type="genomic DNA"
                     /strain="NMB001740"
                     /isolation_source="clinical sample"
                     /db_xref="taxon:446"
                     /geo_loc_name="Switzerland: Basel"
                     /lat_lon="47.55839 N 7.57327 E"
                     /collection_date="2017"
                     /collected_by="USB"
WGS         RBFG01000001-RBFG01000030
WGS_SCAFLD  NZ_RBFG01000001-NZ_RBFG01000030
//
LOCUS       NZ_RBHA01000000      3338524 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Legionella pneumophila strain NMB001861, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RBHA00000000
VERSION     NZ_RBHA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10142091
            Assembly: GCF_004169875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella pneumophila
  ORGANISM  Legionella pneumophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3338524)
  AUTHORS   Wuthrich,D., Gautsch,S., Spieler-Denz,R., Dubuis,O., Gaia,V.,
            Moran-Gilad,J., Hinic,V., Seth-Smith,H.M., Nickel,C.H.,
            Tschudin-Sutter,S., Bassetti,S., Haenggi,M., Brodmann,P., Fuchs,S.
            and Egli,A.
  TITLE     Air-conditioner cooling towers as complex reservoirs and continuous
            source of Legionella pneumophila infection evidenced by a genomic
            analysis study in 2017, Switzerland
  JOURNAL   Euro Surveill 24 (4) (2019)
   PUBMED   30696527
REFERENCE   2  (bases 1 to 3338524)
  AUTHORS   Wuthrich,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2018) Clinical Microbiology, University Hospital
            Basel, Petersgraben 4, Basel 4031, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RBHA00000000.1.
            The Legionella pneumophila whole genome shotgun (WGS) project has
            the project accession NZ_RBHA00000000.  This version of the project
            (01) has the accession number NZ_RBHA01000000, and consists of
            sequences RBHA01000001-RBHA01000028.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 269x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004169875.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:17:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,992
            CDSs (total)                      :: 2,942
            Genes (coding)                    :: 2,922
            CDSs (with protein)               :: 2,922
            Genes (RNA)                       :: 50
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 7 of 20
            Pseudo Genes (incomplete)         :: 16 of 20
            Pseudo Genes (internal stop)      :: 1 of 20
            Pseudo Genes (multiple problems)  :: 3 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3338524
                     /organism="Legionella pneumophila"
                     /mol_type="genomic DNA"
                     /strain="NMB001861"
                     /isolation_source="clinical sample"
                     /db_xref="taxon:446"
                     /geo_loc_name="Switzerland: Basel"
                     /lat_lon="47.55839 N 7.57327 E"
                     /collection_date="2003"
                     /collected_by="USB"
WGS         RBHA01000001-RBHA01000028
WGS_SCAFLD  NZ_RBHA01000001-NZ_RBHA01000028
//
LOCUS       NZ_FXWP01000000      4956546 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Kosakonia pseudosacchari strain JM-387, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FXWP00000000
VERSION     NZ_FXWP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA104072116
            Assembly: GCF_900184035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kosakonia pseudosacchari
  ORGANISM  Kosakonia pseudosacchari
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Kosakonia.
REFERENCE   1
  AUTHORS   Doijad PRAKASH,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-MAY-2017) JUSTUS LIEBIG UNIVERSITY, Biomedizinisches
            Forschungszentrum Seltersberg, Schubertstr. 81, Giessen 35392,
            Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FXWP00000000.1.
            The Kosakonia pseudosacchari whole genome shotgun (WGS) project has
            the project accession NZ_FXWP00000000.  This version of the project
            (01) has the accession number NZ_FXWP01000000, and consists of
            sequences FXWP01000001-FXWP01000029.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900184035.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:12:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,796
            CDSs (total)                      :: 4,690
            Genes (coding)                    :: 4,647
            CDSs (with protein)               :: 4,647
            Genes (RNA)                       :: 106
            rRNAs                             :: 8, 5, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 5 (16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 17 of 43
            Pseudo Genes (incomplete)         :: 34 of 43
            Pseudo Genes (internal stop)      :: 8 of 43
            Pseudo Genes (multiple problems)  :: 14 of 43
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4956546
                     /organism="Kosakonia pseudosacchari"
                     /mol_type="genomic DNA"
                     /strain="JM-387"
                     /type_material="type strain of Kosakonia pseudosacchari"
                     /db_xref="taxon:1646340"
WGS         FXWP01000001-FXWP01000029
WGS_SCAFLD  NZ_FXWP01000001-NZ_FXWP01000029
//
LOCUS       NZ_UEWV01000000      1824161 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus influenzae isolate PTHi-6916, whole genome shotgun
            sequencing project.
ACCESSION   NZ_UEWV00000000
VERSION     NZ_UEWV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA4643458
            Assembly: GCF_900408145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1
  CONSRTM   Bioinformatics Unit on Microbial Genomics of the Portuguese NIH
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAY-2018) NATIONAL INSTITUTE OF HEALTH DR. RICARDO
            JORGE, Bioinformatics Unit, Avenida Padre Cruz, 1649-016 Lisboa,
            Portugal, Portugal
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            UEWV00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_UEWV00000000.  This version of the project
            (01) has the accession number NZ_UEWV01000000, and consists of
            sequences UEWV01000001-UEWV01000029.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900408145.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:29:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,826
            CDSs (total)                      :: 1,756
            Genes (coding)                    :: 1,705
            CDSs (with protein)               :: 1,705
            Genes (RNA)                       :: 70
            rRNAs                             :: 7, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 23S)
            partial rRNAs                     :: 4, 1 (16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 26 of 51
            Pseudo Genes (incomplete)         :: 29 of 51
            Pseudo Genes (internal stop)      :: 9 of 51
            Pseudo Genes (multiple problems)  :: 12 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1824161
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /serotype="NT"
                     /isolate="PTHi-6916"
                     /db_xref="taxon:727"
WGS         UEWV01000001-UEWV01000029
WGS_SCAFLD  NZ_UEWV01000001-NZ_UEWV01000029
//
LOCUS       NZ_NKKT01000000      2322358 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lactobacillus crispatus strain RL30, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NKKT00000000
VERSION     NZ_NKKT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07213210
            Assembly: GCF_004361455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactobacillus crispatus
  ORGANISM  Lactobacillus crispatus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (bases 1 to 2322358)
  AUTHORS   Swanenburg,J. and Kort,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-JUN-2017) Microbiology and Systems Biology, TNO,
            Utrechtseweg 48, Zeist 3704 HE, Netherlands
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NKKT00000000.1.
            The Lactobacillus crispatus whole genome shotgun (WGS) project has
            the project accession NZ_NKKT00000000.  This version of the project
            (01) has the accession number NZ_NKKT01000000, and consists of
            sequences NKKT01000001-NKKT01000407.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 25-FEB-2017
            Assembly Method        :: SPAdes v. 3.5.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 59x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004361455.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:26:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,638
            CDSs (total)                      :: 2,562
            Genes (coding)                    :: 2,338
            CDSs (with protein)               :: 2,338
            Genes (RNA)                       :: 76
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 224
            CDSs (without protein)            :: 224
            Pseudo Genes (ambiguous residues) :: 0 of 224
            Pseudo Genes (frameshifted)       :: 54 of 224
            Pseudo Genes (incomplete)         :: 158 of 224
            Pseudo Genes (internal stop)      :: 26 of 224
            Pseudo Genes (multiple problems)  :: 13 of 224
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2322358
                     /organism="Lactobacillus crispatus"
                     /mol_type="genomic DNA"
                     /strain="RL30"
                     /isolation_source="mucosa of vagina [UBERON:0004983]"
                     /host="Homo sapiens"
                     /db_xref="taxon:47770"
                     /geo_loc_name="Netherlands: Amsterdam"
                     /lat_lon="52.3625 N 4.9087 E"
                     /collection_date="2012-06-01"
WGS         NKKT01000001-NKKT01000407
WGS_SCAFLD  NZ_NKKT01000001-NZ_NKKT01000407
//
LOCUS       NZ_NGFO01000000      5756417 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Gordonia lacunae strain BS2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_NGFO00000000
VERSION     NZ_NGFO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06928587
            Assembly: GCF_002149015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Gordonia lacunae
  ORGANISM  Gordonia lacunae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Gordoniaceae; Gordonia.
REFERENCE   1  (bases 1 to 5756417)
  AUTHORS   Le Roes-Hill,M., Prins,A. and Durrell,K.A.
  TITLE     Biotechnological potential of actinobacteria isolated from South
            African environments
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5756417)
  AUTHORS   Le Roes-Hill,M., Prins,A. and Durrell,K.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAY-2017) Biocatalysis and Technical Biology Research
            Group, Cape Peninsula University of Technology, Symphony Way,
            Bellville 7530, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NGFO00000000.1.
            The Gordonia lacunae whole genome shotgun (WGS) project has the
            project accession NZ_NGFO00000000.  This version of the project
            (01) has the accession number NZ_NGFO01000000, and consists of
            sequences NGFO01000001-NGFO01000090.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 21-FEB-2017
            Assembly Method        :: A5 Miseq v. August-2017
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002149015.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:26:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,235
            CDSs (total)                      :: 5,173
            Genes (coding)                    :: 5,115
            CDSs (with protein)               :: 5,115
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 58
            CDSs (without protein)            :: 58
            Pseudo Genes (ambiguous residues) :: 0 of 58
            Pseudo Genes (frameshifted)       :: 16 of 58
            Pseudo Genes (incomplete)         :: 47 of 58
            Pseudo Genes (internal stop)      :: 0 of 58
            Pseudo Genes (multiple problems)  :: 5 of 58
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5756417
                     /organism="Gordonia lacunae"
                     /mol_type="genomic DNA"
                     /strain="BS2"
                     /isolation_source="Lagoon sediment"
                     /type_material="type strain of Gordonia lacunae"
                     /db_xref="taxon:417102"
                     /geo_loc_name="South Africa: Langebaan"
                     /collection_date="2003-03-01"
                     /collected_by="Candice Goodwin"
                     /identified_by="Marilize Le Roes-Hill"
WGS         NGFO01000001-NGFO01000090
WGS_SCAFLD  NZ_NGFO01000001-NZ_NGFO01000090
//
LOCUS       NZ_RQGH01000000      3964952 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira jelokensis strain 201702451, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RQGH00000000
VERSION     NZ_RQGH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10316405
            Assembly: GCF_004769635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira jelokensis
  ORGANISM  Leptospira jelokensis
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 3964952)
  AUTHORS   Vincent,A.T., Schiettekatte,O., Bourhy,P., Veyrier,F.J. and
            Picardeau,M.
  TITLE     Revisiting the worldwide diversity of Leptospira species in the
            environment
  JOURNAL   PLoS Negl Trop Dis (2019) In press
REFERENCE   2  (bases 1 to 3964952)
  AUTHORS   Vincent,A.T., Schiettekatte,O., Bourhy,P., Veyrier,F.J. and
            Picardeau,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2018) Microbiology, INRS-Institut
            Armand-Frappier, 531 Bd des Prairies, Laval, Quebec H7V1B7, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RQGH00000000.1.
            The Leptospira jelokensis whole genome shotgun (WGS) project has
            the project accession NZ_RQGH00000000.  This version of the project
            (01) has the accession number NZ_RQGH01000000, and consists of
            sequences RQGH01000001-RQGH01000041.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004769635.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:27:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,707
            CDSs (total)                      :: 3,665
            Genes (coding)                    :: 3,641
            CDSs (with protein)               :: 3,641
            Genes (RNA)                       :: 42
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 1 (5S, 16S, 23S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 4 of 24
            Pseudo Genes (incomplete)         :: 20 of 24
            Pseudo Genes (internal stop)      :: 4 of 24
            Pseudo Genes (multiple problems)  :: 3 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3964952
                     /organism="Leptospira jelokensis"
                     /mol_type="genomic DNA"
                     /strain="201702451"
                     /isolation_source="soil"
                     /db_xref="taxon:2484931"
                     /geo_loc_name="Malaysia"
                     /collection_date="2016"
WGS         RQGH01000001-RQGH01000041
WGS_SCAFLD  NZ_RQGH01000001-NZ_RQGH01000041
//
LOCUS       NZ_QSWO01000000      1860012 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus influenzae strain M07659, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QSWO00000000
VERSION     NZ_QSWO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09760374
            Assembly: GCF_003458065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (bases 1 to 1860012)
  AUTHORS   Topaz,N., Boxrud,D., Retchless,A.C., Nichols,M., Chang,H.Y., Hu,F.
            and Wang,X.
  TITLE     BMScan: using whole genome similarity to rapidly and accurately
            identify bacterial meningitis causing species
  JOURNAL   BMC Infect Dis 18 (1), 405 (2018)
   PUBMED   30111301
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1860012)
  AUTHORS   Topaz,N., Retchless,A.C., Chang,H.-Y., Hu,F. and Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-AUG-2018) Bacterial Meningitis Lab, Centers for
            Disease Control and Prevention, 1600 Clifton Rd, Atlanta, GA 30333,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QSWO00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_QSWO00000000.  This version of the project
            (01) has the accession number NZ_QSWO01000000, and consists of
            sequences QSWO01000001-QSWO01000023.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 142.82820113687438x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003458065.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:38:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,877
            CDSs (total)                      :: 1,808
            Genes (coding)                    :: 1,758
            CDSs (with protein)               :: 1,758
            Genes (RNA)                       :: 69
            rRNAs                             :: 8, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 22 of 50
            Pseudo Genes (incomplete)         :: 32 of 50
            Pseudo Genes (internal stop)      :: 10 of 50
            Pseudo Genes (multiple problems)  :: 13 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1860012
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /strain="M07659"
                     /host="Homo sapiens"
                     /db_xref="taxon:727"
                     /collected_by="Centers for Disease Control and Prevention"
WGS         QSWO01000001-QSWO01000023
WGS_SCAFLD  NZ_QSWO01000001-NZ_QSWO01000023
//
LOCUS       NZ_SDGL01000000      1661396 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lactobacillus mulieris strain c10Ua161M, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SDGL00000000
VERSION     NZ_SDGL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10787449
            Assembly: GCF_007095465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactobacillus mulieris
  ORGANISM  Lactobacillus mulieris
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (bases 1 to 1661396)
  AUTHORS   Pimentel,L., Salsinha,S., Rodriguez-Alcala,L. and Pintado,M.
  TITLE     Lactobacillus femina sp. nov., isolated from the female urinary
            tract
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1661396)
  AUTHORS   Rocha,J., Botelho,J., Ksiezarek,M., Ribeiro,T.G., Machado,M.,
            Carrico,J., Perovic,S.U. and Peixe,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JAN-2019) Lab of Microbiology, FFUP, UCIBIO/REQUIMTE,
            Faculty of Pharmacy, University of Porto, Rua Jorge Viterbo
            Ferreira n. 228, Porto 4050-313, Portugal
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SDGL00000000.1.
            The Lactobacillus mulieris whole genome shotgun (WGS) project has
            the project accession NZ_SDGL00000000.  This version of the project
            (01) has the accession number NZ_SDGL01000000, and consists of
            sequences SDGL01000001-SDGL01000044.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 84.5x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007095465.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:28:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,547
            CDSs (total)                      :: 1,485
            Genes (coding)                    :: 1,460
            CDSs (with protein)               :: 1,460
            Genes (RNA)                       :: 62
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 25
            CDSs (without protein)            :: 25
            Pseudo Genes (ambiguous residues) :: 0 of 25
            Pseudo Genes (frameshifted)       :: 11 of 25
            Pseudo Genes (incomplete)         :: 15 of 25
            Pseudo Genes (internal stop)      :: 3 of 25
            Pseudo Genes (multiple problems)  :: 4 of 25
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661396
                     /organism="Lactobacillus mulieris"
                     /mol_type="genomic DNA"
                     /strain="c10Ua161M"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /type_material="type strain of Lactobacillus mulieris"
                     /db_xref="taxon:2508708"
                     /geo_loc_name="Portugal: Porto"
                     /collection_date="2017-03-13"
WGS         SDGL01000001-SDGL01000044
WGS_SCAFLD  NZ_SDGL01000001-NZ_SDGL01000044
//
LOCUS       NZ_QXJF01000000      2091185 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Helicobacter labetoulli strain 48519, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QXJF00000000
VERSION     NZ_QXJF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09951182
            Assembly: GCF_003670275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter labetoulli
  ORGANISM  Helicobacter labetoulli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 2091185)
  AUTHORS   Berthenet,E. and Lehours,P.
  TITLE     Whole-genome sequencing of three strains suspected to belong to new
            Helicobacter species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2091185)
  AUTHORS   Berthenet,E. and Lehours,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2018) CNRCH Laboratoire de Bacteriologie, CHU
            Pellegrin, Place Amelie Raba Leon, Bordeaux 33076, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QXJF00000000.1.
            The Helicobacter labetoulli whole genome shotgun (WGS) project has
            the project accession NZ_QXJF00000000.  This version of the project
            (01) has the accession number NZ_QXJF01000000, and consists of
            sequences QXJF01000001-QXJF01000042.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 350x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003670275.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:47:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,227
            CDSs (total)                      :: 2,182
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 45
            CDSs (without protein)            :: 45
            Pseudo Genes (ambiguous residues) :: 0 of 45
            Pseudo Genes (frameshifted)       :: 12 of 45
            Pseudo Genes (incomplete)         :: 34 of 45
            Pseudo Genes (internal stop)      :: 2 of 45
            Pseudo Genes (multiple problems)  :: 3 of 45
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2091185
                     /organism="Helicobacter labetoulli"
                     /mol_type="genomic DNA"
                     /strain="48519"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /type_material="type strain of Helicobacter labetoulli"
                     /db_xref="taxon:2315333"
                     /geo_loc_name="France: Paris"
                     /collection_date="2017-11"
                     /collected_by="Cochin Hospital Paris"
WGS         QXJF01000001-QXJF01000042
WGS_SCAFLD  NZ_QXJF01000001-NZ_QXJF01000042
//
LOCUS       NZ_RQHT01000000      4027579 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira bandrabouensis strain 201601111, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RQHT00000000
VERSION     NZ_RQHT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10316367
            Assembly: GCF_004770905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira bandrabouensis
  ORGANISM  Leptospira bandrabouensis
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4027579)
  AUTHORS   Vincent,A.T., Schiettekatte,O., Bourhy,P., Veyrier,F.J. and
            Picardeau,M.
  TITLE     Revisiting the worldwide diversity of Leptospira species in the
            environment
  JOURNAL   PLoS Negl Trop Dis (2019) In press
REFERENCE   2  (bases 1 to 4027579)
  AUTHORS   Vincent,A.T., Schiettekatte,O., Bourhy,P., Veyrier,F.J. and
            Picardeau,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2018) Microbiology, INRS-Institut
            Armand-Frappier, 531 Bd des Prairies, Laval, Quebec H7V1B7, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RQHT00000000.1.
            The Leptospira bandrabouensis whole genome shotgun (WGS) project
            has the project accession NZ_RQHT00000000.  This version of the
            project (01) has the accession number NZ_RQHT01000000, and consists
            of sequences RQHT01000001-RQHT01000019.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004770905.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:33:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,809
            CDSs (total)                      :: 3,767
            Genes (coding)                    :: 3,748
            CDSs (with protein)               :: 3,748
            Genes (RNA)                       :: 42
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 19
            CDSs (without protein)            :: 19
            Pseudo Genes (ambiguous residues) :: 0 of 19
            Pseudo Genes (frameshifted)       :: 2 of 19
            Pseudo Genes (incomplete)         :: 14 of 19
            Pseudo Genes (internal stop)      :: 3 of 19
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4027579
                     /organism="Leptospira bandrabouensis"
                     /mol_type="genomic DNA"
                     /strain="201601111"
                     /isolation_source="water"
                     /db_xref="taxon:2484903"
                     /geo_loc_name="Mayotte"
                     /collection_date="2016"
WGS         RQHT01000001-RQHT01000019
WGS_SCAFLD  NZ_RQHT01000001-NZ_RQHT01000019
//
LOCUS       NZ_MVVP01000000      1580589 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Helicobacter pylori strain HP13050, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MVVP00000000
VERSION     NZ_MVVP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06329526
            Assembly: GCF_003637115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori
  ORGANISM  Helicobacter pylori
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1580589)
  AUTHORS   Lamichhane,B., Chua,E.G. and Tay,C.Y.
  TITLE     Genome analysis of clinical strains of Helicobacter pylori from
            Australia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1580589)
  AUTHORS   Lamichhane,B., Chua,E.G. and Tay,C.Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2017) Marshall Center for Infectious Diseases
            Research and Training, University of Western Australia, Stirling
            Highway, Crawley 6009, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MVVP00000000.1.
            The Helicobacter pylori whole genome shotgun (WGS) project has the
            project accession NZ_MVVP00000000.  This version of the project
            (01) has the accession number NZ_MVVP01000000, and consists of
            sequences MVVP01000001-MVVP01000031.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 106x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003637115.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:46:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,551
            CDSs (total)                      :: 1,509
            Genes (coding)                    :: 1,439
            CDSs (with protein)               :: 1,439
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 44 of 70
            Pseudo Genes (incomplete)         :: 28 of 70
            Pseudo Genes (internal stop)      :: 11 of 70
            Pseudo Genes (multiple problems)  :: 12 of 70
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1580589
                     /organism="Helicobacter pylori"
                     /mol_type="genomic DNA"
                     /strain="HP13050"
                     /host="Homo sapiens"
                     /db_xref="taxon:210"
                     /geo_loc_name="Australia: Perth"
                     /collection_date="2013"
                     /collected_by="Barry Marshall"
WGS         MVVP01000001-MVVP01000031
WGS_SCAFLD  NZ_MVVP01000001-NZ_MVVP01000031
//
LOCUS       NZ_QQJZ01000000      1843746 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus influenzae strain M24593, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QQJZ00000000
VERSION     NZ_QQJZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09704925
            Assembly: GCF_003493625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (bases 1 to 1843746)
  AUTHORS   Topaz,N., Boxrud,D., Retchless,A.C., Nichols,M., Chang,H.Y., Hu,F.
            and Wang,X.
  TITLE     BMScan: using whole genome similarity to rapidly and accurately
            identify bacterial meningitis causing species
  JOURNAL   BMC Infect Dis 18 (1), 405 (2018)
   PUBMED   30111301
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843746)
  AUTHORS   Topaz,N., Retchless,A.C., Chang,H.-Y., Hu,F. and Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUL-2018) Bacterial Meningitis Lab, Centers for
            Disease Control and Prevention, 1600 Clifton Rd, Atlanta, GA 30333,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QQJZ00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_QQJZ00000000.  This version of the project
            (01) has the accession number NZ_QQJZ01000000, and consists of
            sequences QQJZ01000001-QQJZ01000018.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 159.74182787108424x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003493625.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:49:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,854
            CDSs (total)                      :: 1,774
            Genes (coding)                    :: 1,721
            CDSs (with protein)               :: 1,721
            Genes (RNA)                       :: 80
            rRNAs                             :: 7, 7, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 7, 8 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 21 of 53
            Pseudo Genes (incomplete)         :: 37 of 53
            Pseudo Genes (internal stop)      :: 7 of 53
            Pseudo Genes (multiple problems)  :: 11 of 53
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843746
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /strain="M24593"
                     /host="Homo sapiens"
                     /db_xref="taxon:727"
                     /collected_by="Centers for Disease Control and Prevention"
WGS         QQJZ01000001-QQJZ01000018
WGS_SCAFLD  NZ_QQJZ01000001-NZ_QQJZ01000018
//
LOCUS       NZ_QQJA01000000      1816971 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus influenzae strain M18770, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QQJA00000000
VERSION     NZ_QQJA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09704912
            Assembly: GCF_003490225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (bases 1 to 1816971)
  AUTHORS   Topaz,N., Boxrud,D., Retchless,A.C., Nichols,M., Chang,H.Y., Hu,F.
            and Wang,X.
  TITLE     BMScan: using whole genome similarity to rapidly and accurately
            identify bacterial meningitis causing species
  JOURNAL   BMC Infect Dis 18 (1), 405 (2018)
   PUBMED   30111301
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816971)
  AUTHORS   Topaz,N., Retchless,A.C., Chang,H.-Y., Hu,F. and Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUL-2018) Bacterial Meningitis Lab, Centers for
            Disease Control and Prevention, 1600 Clifton Rd, Atlanta, GA 30333,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QQJA00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_QQJA00000000.  This version of the project
            (01) has the accession number NZ_QQJA01000000, and consists of
            sequences QQJA01000001-QQJA01000021.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 171.64078293577148x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003490225.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,827
            CDSs (total)                      :: 1,753
            Genes (coding)                    :: 1,706
            CDSs (with protein)               :: 1,706
            Genes (RNA)                       :: 74
            rRNAs                             :: 7, 7, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 6 (16S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 47
            CDSs (without protein)            :: 47
            Pseudo Genes (ambiguous residues) :: 0 of 47
            Pseudo Genes (frameshifted)       :: 20 of 47
            Pseudo Genes (incomplete)         :: 27 of 47
            Pseudo Genes (internal stop)      :: 13 of 47
            Pseudo Genes (multiple problems)  :: 12 of 47
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816971
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /strain="M18770"
                     /host="Homo sapiens"
                     /db_xref="taxon:727"
                     /collected_by="Centers for Disease Control and Prevention"
WGS         QQJA01000001-QQJA01000021
WGS_SCAFLD  NZ_QQJA01000001-NZ_QQJA01000021
//
LOCUS       NZ_RQGQ01000000      4003841 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira congkakensis strain 201702421, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RQGQ00000000
VERSION     NZ_RQGQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10316396
            Assembly: GCF_004770265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira congkakensis
  ORGANISM  Leptospira congkakensis
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4003841)
  AUTHORS   Vincent,A.T., Schiettekatte,O., Bourhy,P., Veyrier,F.J. and
            Picardeau,M.
  TITLE     Revisiting the worldwide diversity of Leptospira species in the
            environment
  JOURNAL   PLoS Negl Trop Dis (2019) In press
REFERENCE   2  (bases 1 to 4003841)
  AUTHORS   Vincent,A.T., Schiettekatte,O., Bourhy,P., Veyrier,F.J. and
            Picardeau,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2018) Microbiology, INRS-Institut
            Armand-Frappier, 531 Bd des Prairies, Laval, Quebec H7V1B7, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RQGQ00000000.1.
            The Leptospira congkakensis whole genome shotgun (WGS) project has
            the project accession NZ_RQGQ00000000.  This version of the project
            (01) has the accession number NZ_RQGQ01000000, and consists of
            sequences RQGQ01000001-RQGQ01000024.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004770265.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:33:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,705
            CDSs (total)                      :: 3,664
            Genes (coding)                    :: 3,653
            CDSs (with protein)               :: 3,653
            Genes (RNA)                       :: 41
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4003841
                     /organism="Leptospira congkakensis"
                     /mol_type="genomic DNA"
                     /strain="201702421"
                     /isolation_source="soil"
                     /db_xref="taxon:2484932"
                     /geo_loc_name="Malaysia"
                     /collection_date="2016"
WGS         RQGQ01000001-RQGQ01000024
WGS_SCAFLD  NZ_RQGQ01000001-NZ_RQGQ01000024
//
LOCUS       NZ_MVSX01000000      1600967 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Helicobacter pylori strain HP99647, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MVSX00000000
VERSION     NZ_MVSX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06329596
            Assembly: GCF_003635615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori
  ORGANISM  Helicobacter pylori
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1600967)
  AUTHORS   Lamichhane,B., Chua,E.G. and Tay,C.Y.
  TITLE     Genome analysis of clinical strains of Helicobacter pylori from
            Australia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1600967)
  AUTHORS   Lamichhane,B., Chua,E.G. and Tay,C.Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2017) Marshall Center for Infectious Diseases
            Research and Training, University of Western Australia, Stirling
            Highway, Crawley 6009, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MVSX00000000.1.
            The Helicobacter pylori whole genome shotgun (WGS) project has the
            project accession NZ_MVSX00000000.  This version of the project
            (01) has the accession number NZ_MVSX01000000, and consists of
            sequences MVSX01000001-MVSX01000030.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003635615.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:45:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,549
            CDSs (total)                      :: 1,507
            Genes (coding)                    :: 1,445
            CDSs (with protein)               :: 1,445
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 37 of 62
            Pseudo Genes (incomplete)         :: 24 of 62
            Pseudo Genes (internal stop)      :: 11 of 62
            Pseudo Genes (multiple problems)  :: 9 of 62
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600967
                     /organism="Helicobacter pylori"
                     /mol_type="genomic DNA"
                     /strain="HP99647"
                     /host="Homo sapiens"
                     /db_xref="taxon:210"
                     /geo_loc_name="Australia: Perth"
                     /collection_date="1999"
                     /collected_by="Barry Marshall"
WGS         MVSX01000001-MVSX01000030
WGS_SCAFLD  NZ_MVSX01000001-NZ_MVSX01000030
//
LOCUS       NZ_QQKG01000000      1876170 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus influenzae strain M23174, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QQKG00000000
VERSION     NZ_QQKG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09704920
            Assembly: GCF_003493485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (bases 1 to 1876170)
  AUTHORS   Topaz,N., Boxrud,D., Retchless,A.C., Nichols,M., Chang,H.Y., Hu,F.
            and Wang,X.
  TITLE     BMScan: using whole genome similarity to rapidly and accurately
            identify bacterial meningitis causing species
  JOURNAL   BMC Infect Dis 18 (1), 405 (2018)
   PUBMED   30111301
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1876170)
  AUTHORS   Topaz,N., Retchless,A.C., Chang,H.-Y., Hu,F. and Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUL-2018) Bacterial Meningitis Lab, Centers for
            Disease Control and Prevention, 1600 Clifton Rd, Atlanta, GA 30333,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QQKG00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_QQKG00000000.  This version of the project
            (01) has the accession number NZ_QQKG01000000, and consists of
            sequences QQKG01000001-QQKG01000014.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 151.99660154570216x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003493485.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:48:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,885
            CDSs (total)                      :: 1,806
            Genes (coding)                    :: 1,754
            CDSs (with protein)               :: 1,754
            Genes (RNA)                       :: 79
            rRNAs                             :: 7, 7, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 16S)
            partial rRNAs                     :: 1, 6, 10 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 26 of 52
            Pseudo Genes (incomplete)         :: 33 of 52
            Pseudo Genes (internal stop)      :: 8 of 52
            Pseudo Genes (multiple problems)  :: 10 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1876170
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /strain="M23174"
                     /host="Homo sapiens"
                     /db_xref="taxon:727"
                     /collected_by="Centers for Disease Control and Prevention"
WGS         QQKG01000001-QQKG01000014
WGS_SCAFLD  NZ_QQKG01000001-NZ_QQKG01000014
//
LOCUS       NZ_RQGG01000000      3769371 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira kemamanensis strain 201702454, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RQGG00000000
VERSION     NZ_RQGG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10316406
            Assembly: GCF_004769665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira kemamanensis
  ORGANISM  Leptospira kemamanensis
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 3769371)
  AUTHORS   Vincent,A.T., Schiettekatte,O., Bourhy,P., Veyrier,F.J. and
            Picardeau,M.
  TITLE     Revisiting the worldwide diversity of Leptospira species in the
            environment
  JOURNAL   PLoS Negl Trop Dis (2019) In press
REFERENCE   2  (bases 1 to 3769371)
  AUTHORS   Vincent,A.T., Schiettekatte,O., Bourhy,P., Veyrier,F.J. and
            Picardeau,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2018) Microbiology, INRS-Institut
            Armand-Frappier, 531 Bd des Prairies, Laval, Quebec H7V1B7, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RQGG00000000.1.
            The Leptospira kemamanensis whole genome shotgun (WGS) project has
            the project accession NZ_RQGG00000000.  This version of the project
            (01) has the accession number NZ_RQGG01000000, and consists of
            sequences RQGG01000001-RQGG01000052.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004769665.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:34:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,551
            CDSs (total)                      :: 3,509
            Genes (coding)                    :: 3,481
            CDSs (with protein)               :: 3,481
            Genes (RNA)                       :: 42
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 4 of 28
            Pseudo Genes (incomplete)         :: 22 of 28
            Pseudo Genes (internal stop)      :: 2 of 28
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3769371
                     /organism="Leptospira kemamanensis"
                     /mol_type="genomic DNA"
                     /strain="201702454"
                     /isolation_source="Environment"
                     /db_xref="taxon:2484942"
                     /geo_loc_name="Malaysia"
                     /collection_date="2016"
WGS         RQGG01000001-RQGG01000052
WGS_SCAFLD  NZ_RQGG01000001-NZ_RQGG01000052
//
LOCUS       NZ_QUAE01000000      4112483 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Halobacillus trueperi strain KCTC 3686, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QUAE00000000
VERSION     NZ_QUAE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09770327
            Assembly: GCF_003386945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Halobacillus trueperi
  ORGANISM  Halobacillus trueperi
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Halobacillus.
REFERENCE   1  (bases 1 to 4112483)
  AUTHORS   Cho,K.H., Kwak,M.-J., Kim,B.-Y. and Chun,J.
  TITLE     Genome sequence of Halobacillus trueperi KCTC 3686
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4112483)
  AUTHORS   Cho,K.H., Kwak,M.-J., Kim,B.-Y. and Chun,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-AUG-2018) Research, ChunLab, 2477, Nambusunhwan-ro,
            Seocho-gu, Seoul 06725, South Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QUAE00000000.1.
            The Halobacillus trueperi whole genome shotgun (WGS) project has
            the project accession NZ_QUAE00000000.  This version of the project
            (01) has the accession number NZ_QUAE01000000, and consists of
            sequences QUAE01000001-QUAE01000066.
            Bacteria and source DNA available from Byung-Yong Kim.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 71.26x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003386945.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:52:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,129
            CDSs (total)                      :: 4,025
            Genes (coding)                    :: 3,993
            CDSs (with protein)               :: 3,993
            Genes (RNA)                       :: 104
            rRNAs                             :: 9, 13, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 12, 8 (16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 11 of 32
            Pseudo Genes (incomplete)         :: 21 of 32
            Pseudo Genes (internal stop)      :: 8 of 32
            Pseudo Genes (multiple problems)  :: 7 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4112483
                     /organism="Halobacillus trueperi"
                     /mol_type="genomic DNA"
                     /strain="KCTC 3686"
                     /culture_collection="DSM:10404"
                     /type_material="type strain of Halobacillus trueperi"
                     /db_xref="taxon:156205"
WGS         QUAE01000001-QUAE01000066
WGS_SCAFLD  NZ_QUAE01000001-NZ_QUAE01000066
//
LOCUS       NZ_RQGL01000000      4300252 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira yasudae strain 201702446, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RQGL00000000
VERSION     NZ_RQGL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10316401
            Assembly: GCF_004769735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira yasudae
  ORGANISM  Leptospira yasudae
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4300252)
  AUTHORS   Vincent,A.T., Schiettekatte,O., Bourhy,P., Veyrier,F.J. and
            Picardeau,M.
  TITLE     Revisiting the worldwide diversity of Leptospira species in the
            environment
  JOURNAL   PLoS Negl Trop Dis (2019) In press
REFERENCE   2  (bases 1 to 4300252)
  AUTHORS   Vincent,A.T., Schiettekatte,O., Bourhy,P., Veyrier,F.J. and
            Picardeau,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2018) Microbiology, INRS-Institut
            Armand-Frappier, 531 Bd des Prairies, Laval, Quebec H7V1B7, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RQGL00000000.1.
            The Leptospira yasudae whole genome shotgun (WGS) project has the
            project accession NZ_RQGL00000000.  This version of the project
            (01) has the accession number NZ_RQGL01000000, and consists of
            sequences RQGL01000001-RQGL01000038.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004769735.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:34:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,946
            CDSs (total)                      :: 3,902
            Genes (coding)                    :: 3,821
            CDSs (with protein)               :: 3,821
            Genes (RNA)                       :: 44
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 26 of 81
            Pseudo Genes (incomplete)         :: 59 of 81
            Pseudo Genes (internal stop)      :: 8 of 81
            Pseudo Genes (multiple problems)  :: 11 of 81
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4300252
                     /organism="Leptospira yasudae"
                     /mol_type="genomic DNA"
                     /strain="201702446"
                     /isolation_source="water"
                     /db_xref="taxon:2202201"
                     /geo_loc_name="Malaysia"
                     /collection_date="2016"
WGS         RQGL01000001-RQGL01000038
WGS_SCAFLD  NZ_RQGL01000001-NZ_RQGL01000038
//
LOCUS       NZ_RQGA01000000      4001979 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira perdikensis strain 201702692, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RQGA00000000
VERSION     NZ_RQGA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10316412
            Assembly: GCF_004769575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira perdikensis
  ORGANISM  Leptospira perdikensis
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4001979)
  AUTHORS   Vincent,A.T., Schiettekatte,O., Bourhy,P., Veyrier,F.J. and
            Picardeau,M.
  TITLE     Revisiting the worldwide diversity of Leptospira species in the
            environment
  JOURNAL   PLoS Negl Trop Dis (2019) In press
REFERENCE   2  (bases 1 to 4001979)
  AUTHORS   Vincent,A.T., Schiettekatte,O., Bourhy,P., Veyrier,F.J. and
            Picardeau,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2018) Microbiology, INRS-Institut
            Armand-Frappier, 531 Bd des Prairies, Laval, Quebec H7V1B7, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RQGA00000000.1.
            The Leptospira perdikensis whole genome shotgun (WGS) project has
            the project accession NZ_RQGA00000000.  This version of the project
            (01) has the accession number NZ_RQGA01000000, and consists of
            sequences RQGA01000001-RQGA01000021.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004769575.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:38:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,738
            CDSs (total)                      :: 3,697
            Genes (coding)                    :: 3,684
            CDSs (with protein)               :: 3,684
            Genes (RNA)                       :: 41
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 0 of 13
            Pseudo Genes (incomplete)         :: 13 of 13
            Pseudo Genes (internal stop)      :: 0 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4001979
                     /organism="Leptospira perdikensis"
                     /mol_type="genomic DNA"
                     /strain="201702692"
                     /isolation_source="soil"
                     /db_xref="taxon:2484948"
                     /geo_loc_name="Malaysia"
                     /collection_date="2017"
WGS         RQGA01000001-RQGA01000021
WGS_SCAFLD  NZ_RQGA01000001-NZ_RQGA01000021
//
LOCUS       NZ_QQJG01000000      1856457 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus influenzae strain M23254, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QQJG00000000
VERSION     NZ_QQJG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09704921
            Assembly: GCF_003493945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (bases 1 to 1856457)
  AUTHORS   Topaz,N., Boxrud,D., Retchless,A.C., Nichols,M., Chang,H.Y., Hu,F.
            and Wang,X.
  TITLE     BMScan: using whole genome similarity to rapidly and accurately
            identify bacterial meningitis causing species
  JOURNAL   BMC Infect Dis 18 (1), 405 (2018)
   PUBMED   30111301
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1856457)
  AUTHORS   Topaz,N., Retchless,A.C., Chang,H.-Y., Hu,F. and Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUL-2018) Bacterial Meningitis Lab, Centers for
            Disease Control and Prevention, 1600 Clifton Rd, Atlanta, GA 30333,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QQJG00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_QQJG00000000.  This version of the project
            (01) has the accession number NZ_QQJG01000000, and consists of
            sequences QQJG01000001-QQJG01000019.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 167.5342133887292x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003493945.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:54:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,879
            CDSs (total)                      :: 1,808
            Genes (coding)                    :: 1,755
            CDSs (with protein)               :: 1,755
            Genes (RNA)                       :: 71
            rRNAs                             :: 5, 7, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            partial rRNAs                     :: 6, 5 (16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 20 of 53
            Pseudo Genes (incomplete)         :: 37 of 53
            Pseudo Genes (internal stop)      :: 7 of 53
            Pseudo Genes (multiple problems)  :: 8 of 53
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1856457
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /strain="M23254"
                     /host="Homo sapiens"
                     /db_xref="taxon:727"
                     /collected_by="Centers for Disease Control and Prevention"
WGS         QQJG01000001-QQJG01000019
WGS_SCAFLD  NZ_QQJG01000001-NZ_QQJG01000019
//
LOCUS       NZ_RJHZ01000000      1597851 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Helicobacter pylori strain ZH113, whole genome shotgun sequencing
            project.
ACCESSION   NZ_RJHZ00000000
VERSION     NZ_RJHZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10340299
            Assembly: GCF_004014185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori
  ORGANISM  Helicobacter pylori
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1597851)
  AUTHORS   Wagner,K.
  TITLE     Genetic determinants and prediction of antibiotic resistance
            phenotypes in Helicobacter pylori
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1597851)
  AUTHORS   Wagner,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2018) Infection Diagnostics, University Hospital
            Basel, Petersplatz 10, Basel 4051, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RJHZ00000000.1.
            The Helicobacter pylori whole genome shotgun (WGS) project has the
            project accession NZ_RJHZ00000000.  This version of the project
            (01) has the accession number NZ_RJHZ01000000, and consists of
            sequences RJHZ01000001-RJHZ01000025.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.6.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004014185.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:00:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,548
            CDSs (total)                      :: 1,506
            Genes (coding)                    :: 1,437
            CDSs (with protein)               :: 1,437
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 44 of 69
            Pseudo Genes (incomplete)         :: 22 of 69
            Pseudo Genes (internal stop)      :: 9 of 69
            Pseudo Genes (multiple problems)  :: 6 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1597851
                     /organism="Helicobacter pylori"
                     /mol_type="genomic DNA"
                     /strain="ZH113"
                     /isolation_source="gastric biopsy"
                     /host="Homo sapiens"
                     /db_xref="taxon:210"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.36667 N 8.55 E"
                     /collection_date="2017-11-11"
                     /collected_by="K Wagner"
WGS         RJHZ01000001-RJHZ01000025
WGS_SCAFLD  NZ_RJHZ01000001-NZ_RJHZ01000025
//
LOCUS       NZ_RQFY01000000      4319728 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira koniambonensis strain 201800265, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RQFY00000000
VERSION     NZ_RQFY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10316414
            Assembly: GCF_004769555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira koniambonensis
  ORGANISM  Leptospira koniambonensis
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4319728)
  AUTHORS   Vincent,A.T., Schiettekatte,O., Bourhy,P., Veyrier,F.J. and
            Picardeau,M.
  TITLE     Revisiting the worldwide diversity of Leptospira species in the
            environment
  JOURNAL   PLoS Negl Trop Dis (2019) In press
REFERENCE   2  (bases 1 to 4319728)
  AUTHORS   Vincent,A.T., Schiettekatte,O., Bourhy,P., Veyrier,F.J. and
            Picardeau,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2018) Microbiology, INRS-Institut
            Armand-Frappier, 531 Bd des Prairies, Laval, Quebec H7V1B7, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RQFY00000000.1.
            The Leptospira koniambonensis whole genome shotgun (WGS) project
            has the project accession NZ_RQFY00000000.  This version of the
            project (01) has the accession number NZ_RQFY01000000, and consists
            of sequences RQFY01000001-RQFY01000012.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004769555.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:38:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,000
            CDSs (total)                      :: 3,959
            Genes (coding)                    :: 3,944
            CDSs (with protein)               :: 3,944
            Genes (RNA)                       :: 41
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 15
            CDSs (without protein)            :: 15
            Pseudo Genes (ambiguous residues) :: 0 of 15
            Pseudo Genes (frameshifted)       :: 3 of 15
            Pseudo Genes (incomplete)         :: 13 of 15
            Pseudo Genes (internal stop)      :: 1 of 15
            Pseudo Genes (multiple problems)  :: 1 of 15
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4319728
                     /organism="Leptospira koniambonensis"
                     /mol_type="genomic DNA"
                     /strain="201800265"
                     /isolation_source="soil"
                     /db_xref="taxon:2484950"
                     /geo_loc_name="New Caledonia"
                     /collection_date="2017"
WGS         RQFY01000001-RQFY01000012
WGS_SCAFLD  NZ_RQFY01000001-NZ_RQFY01000012
//
LOCUS       NZ_RJFM01000000      1632814 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Helicobacter pylori strain ZH39, whole genome shotgun sequencing
            project.
ACCESSION   NZ_RJFM00000000
VERSION     NZ_RJFM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10335781
            Assembly: GCF_004012755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori
  ORGANISM  Helicobacter pylori
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1632814)
  AUTHORS   Wagner,K.
  TITLE     Genetic determinants and prediction of antibiotic resistance
            phenotypes in Helicobacter pylori
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1632814)
  AUTHORS   Wagner,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2018) Infection Diagnostics, University Hospital
            Basel, Petersplatz 10, Basel 4051, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RJFM00000000.1.
            The Helicobacter pylori whole genome shotgun (WGS) project has the
            project accession NZ_RJFM00000000.  This version of the project
            (01) has the accession number NZ_RJFM01000000, and consists of
            sequences RJFM01000001-RJFM01000031.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.6.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004012755.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:01:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,574
            CDSs (total)                      :: 1,532
            Genes (coding)                    :: 1,464
            CDSs (with protein)               :: 1,464
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 45 of 68
            Pseudo Genes (incomplete)         :: 21 of 68
            Pseudo Genes (internal stop)      :: 5 of 68
            Pseudo Genes (multiple problems)  :: 3 of 68
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1632814
                     /organism="Helicobacter pylori"
                     /mol_type="genomic DNA"
                     /strain="ZH39"
                     /isolation_source="gastric biopsy"
                     /host="Homo sapiens"
                     /db_xref="taxon:210"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.36667 N 8.55 E"
                     /collection_date="2017-11-11"
                     /collected_by="K Wagner"
WGS         RJFM01000001-RJFM01000031
WGS_SCAFLD  NZ_RJFM01000001-NZ_RJFM01000031
//
LOCUS       NZ_RQFG01000000      4138228 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira kanakyensis strain 201800292, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RQFG00000000
VERSION     NZ_RQFG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10316432
            Assembly: GCF_004769235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira kanakyensis
  ORGANISM  Leptospira kanakyensis
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4138228)
  AUTHORS   Vincent,A.T., Schiettekatte,O., Bourhy,P., Veyrier,F.J. and
            Picardeau,M.
  TITLE     Revisiting the worldwide diversity of Leptospira species in the
            environment
  JOURNAL   PLoS Negl Trop Dis (2019) In press
REFERENCE   2  (bases 1 to 4138228)
  AUTHORS   Vincent,A.T., Schiettekatte,O., Bourhy,P., Veyrier,F.J. and
            Picardeau,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2018) Microbiology, INRS-Institut
            Armand-Frappier, 531 Bd des Prairies, Laval, Quebec H7V1B7, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RQFG00000000.1.
            The Leptospira kanakyensis whole genome shotgun (WGS) project has
            the project accession NZ_RQFG00000000.  This version of the project
            (01) has the accession number NZ_RQFG01000000, and consists of
            sequences RQFG01000001-RQFG01000028.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004769235.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:36:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,887
            CDSs (total)                      :: 3,846
            Genes (coding)                    :: 3,832
            CDSs (with protein)               :: 3,832
            Genes (RNA)                       :: 41
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 14
            CDSs (without protein)            :: 14
            Pseudo Genes (ambiguous residues) :: 0 of 14
            Pseudo Genes (frameshifted)       :: 3 of 14
            Pseudo Genes (incomplete)         :: 12 of 14
            Pseudo Genes (internal stop)      :: 2 of 14
            Pseudo Genes (multiple problems)  :: 2 of 14
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4138228
                     /organism="Leptospira kanakyensis"
                     /mol_type="genomic DNA"
                     /strain="201800292"
                     /isolation_source="soil"
                     /db_xref="taxon:2484968"
                     /geo_loc_name="New Caledonia"
                     /collection_date="2017"
WGS         RQFG01000001-RQFG01000028
WGS_SCAFLD  NZ_RQFG01000001-NZ_RQFG01000028
//
LOCUS       NZ_AGSB02000000      4123637 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Holophaga foetida DSM 6591, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AGSB00000000
VERSION     NZ_AGSB00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02256516
            Assembly: GCF_000242615.2
KEYWORDS    WGS; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Holophaga foetida DSM 6591
  ORGANISM  Holophaga foetida DSM 6591
            Bacteria; Pseudomonadati; Acidobacteriota; Holophagae;
            Holophagales; Holophagaceae; Holophaga.
REFERENCE   1  (bases 1 to 4123637)
  AUTHORS   Anderson,I., Held,B., Lapidus,A., Nolan,M., Lucas,S., Tice,H., Del
            Rio,T.G., Cheng,J.F., Han,C., Tapia,R., Goodwin,L.A., Pitluck,S.,
            Liolios,K., Mavromatis,K., Pagani,I., Ivanova,N., Mikhailova,N.,
            Pati,A., Chen,A., Palaniappan,K., Land,M., Brambilla,E.M.,
            Rohde,M., Spring,S., Goker,M., Detter,J.C., Woyke,T., Bristow,J.,
            Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.P. and
            Kyrpides,N.C.
  TITLE     Genome sequence of the homoacetogenic bacterium Holophaga foetida
            type strain (TMBS4(T))
  JOURNAL   Stand Genomic Sci 6 (2), 174-184 (2012)
   PUBMED   22768361
REFERENCE   2  (bases 1 to 4123637)
  AUTHORS   Eisen,J., Huntemann,M., Han,J., Chen,A., Kyrpides,N.,
            Mavromatis,K., Markowitz,V., Palaniappan,K., Ivanova,N.,
            Schaumberg,A., Pati,A., Liolios,K., Nordberg,H.P., Cantor,M.N.,
            Hua,S.X. and Woyke,T.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2013) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
REFERENCE   3  (bases 1 to 4123637)
  AUTHORS   Lucas,S., Copeland,A., Lapidus,A., Bruce,D., Goodwin,L.,
            Pitluck,S., Peters,L., Kyrpides,N., Mavromatis,K., Detter,J.C.,
            Han,C., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F.,
            Hugenholtz,P., Woyke,T., Wu,D., Spring,S., Schroeder,M.,
            Brambilla,E., Klenk,H.-P. and Eisen,J.A.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Direct Submission
  JOURNAL   Submitted (27-SEP-2011) US DOE Joint Genome Institute, 2800
            Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AGSB00000000.2.
            
            On Jun 11, 2014 this sequence version replaced NZ_AGSB00000000.1.
            The Holophaga foetida DSM 6591 whole genome shotgun (WGS) project
            has the project accession NZ_AGSB00000000.  This version of the
            project (02) has the accession number NZ_AGSB02000000, and consists
            of sequences AGSB02000001-AGSB02000039.
            URL -- http://www.jgi.doe.gov
            JGI Project ID: 401063
            Source DNA and organism available from Hans-Peter Klenk at the
            German Collection of Microorganisms and Cell Cultures (DSMZ)
            (hans-peter.klenk@dsmz.de)
            Contacts: Jonathan  Eisen (jaeisen@ucdavis.edu)
                      Tanja Woyke (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI
            Annotation by JGI
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376)
            Full annotations are available from IMG.
            
            ##MIGS-Data-START##
            collection_date          :: 1989 or earlier
            country                  :: Germany
            environment              :: Aquatic; Mud
            investigation_type       :: bacteria_archaea
            isol_growth_condt        :: 8085918
            lat_lon                  :: 47.663 9.175
            project_name             :: Holophaga foetida TMBS4, DSM 6591
            sequencing_meth          :: WGS
            ref_biomaterial          :: DSM 6591
            biotic_relationship      :: Free living
            rel_to_oxygen            :: Obligate anaerobe
            trophic_level            :: Chemoautotroph
            GOLD Stamp ID            :: Gi05348
            Current Finishing Status :: Level 3: Improved-High-Quality Draft
            Type Strain              :: Yes
            Funding Program          :: DOE-GEBA 2009
            Gene Calling Method      :: Prodigal 1.4, GenePRIMP
            Isolation Site           :: Black anoxic freshwater mud; Germany
            Cell Shape               :: Rod-shaped
            Motility                 :: Nonmotile
            Sporulation              :: Nonsporulating
            Temperature Range        :: Mesophile
            Temperature Optimum      :: 30C
            Gram Staining            :: Gram-
            ##MIGS-Data-END##
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: Unknown program v. before 2011-05-04
            Genome Coverage          :: Unknown
            Sequencing Technology    :: 454-GS-FLX-Titanium; Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000242615.2-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:09:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,652
            CDSs (total)                      :: 3,595
            Genes (coding)                    :: 3,545
            CDSs (with protein)               :: 3,545
            Genes (RNA)                       :: 57
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 18 of 50
            Pseudo Genes (incomplete)         :: 32 of 50
            Pseudo Genes (internal stop)      :: 2 of 50
            Pseudo Genes (multiple problems)  :: 2 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4123637
                     /organism="Holophaga foetida DSM 6591"
                     /mol_type="genomic DNA"
                     /strain="DSM 6591"
                     /isolation_source="black anoxic freshwater mud; Germany"
                     /culture_collection="DSM:6591"
                     /type_material="type strain of Holophaga foetida"
                     /db_xref="taxon:903818"
                     /geo_loc_name="Germany"
WGS         AGSB02000001-AGSB02000039
WGS_SCAFLD  NZ_AGSB02000039
WGS_SCAFLD  NZ_KI912268-NZ_KI912269
//
LOCUS       NZ_RQFK01000000      4108400 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira noumeaensis strain 201800287, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RQFK00000000
VERSION     NZ_RQFK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10316428
            Assembly: GCF_004770765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira noumeaensis
  ORGANISM  Leptospira noumeaensis
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4108400)
  AUTHORS   Vincent,A.T., Schiettekatte,O., Bourhy,P., Veyrier,F.J. and
            Picardeau,M.
  TITLE     Revisiting the worldwide diversity of Leptospira species in the
            environment
  JOURNAL   PLoS Negl Trop Dis (2019) In press
REFERENCE   2  (bases 1 to 4108400)
  AUTHORS   Vincent,A.T., Schiettekatte,O., Bourhy,P., Veyrier,F.J. and
            Picardeau,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2018) Microbiology, INRS-Institut
            Armand-Frappier, 531 Bd des Prairies, Laval, Quebec H7V1B7, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RQFK00000000.1.
            The Leptospira noumeaensis whole genome shotgun (WGS) project has
            the project accession NZ_RQFK00000000.  This version of the project
            (01) has the accession number NZ_RQFK01000000, and consists of
            sequences RQFK01000001-RQFK01000040.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004770765.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:41:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,857
            CDSs (total)                      :: 3,816
            Genes (coding)                    :: 3,796
            CDSs (with protein)               :: 3,796
            Genes (RNA)                       :: 41
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 3 of 20
            Pseudo Genes (incomplete)         :: 17 of 20
            Pseudo Genes (internal stop)      :: 4 of 20
            Pseudo Genes (multiple problems)  :: 3 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4108400
                     /organism="Leptospira noumeaensis"
                     /mol_type="genomic DNA"
                     /strain="201800287"
                     /isolation_source="soil"
                     /db_xref="taxon:2484964"
                     /geo_loc_name="New Caledonia"
                     /collection_date="2017"
WGS         RQFK01000001-RQFK01000040
WGS_SCAFLD  NZ_RQFK01000001-NZ_RQFK01000040
//
LOCUS       NZ_RKQG01000000      8578249 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Kitasatospora cineracea strain DSM 44781, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RKQG00000000
VERSION     NZ_RKQG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10363102
            Assembly: GCF_003814885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kitasatospora cineracea
  ORGANISM  Kitasatospora cineracea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Kitasatospora.
REFERENCE   1  (bases 1 to 8578249)
  AUTHORS   Klenk,H.-P.
  TITLE     Sequencing the genomes of 1000 actinobacteria strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8578249)
  AUTHORS   Klenk,H.-P., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-NOV-2018) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RKQG00000000.1.
            The Kitasatospora cineracea whole genome shotgun (WGS) project has
            the project accession NZ_RKQG00000000.  This version of the project
            (01) has the accession number NZ_RKQG01000000, and consists of
            sequences RKQG01000001-RKQG01000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. smrtanalysis/2.3.0_p5, HGAP 3
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 149.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003814885.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:59:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,726
            CDSs (total)                      :: 7,624
            Genes (coding)                    :: 7,509
            CDSs (with protein)               :: 7,509
            Genes (RNA)                       :: 102
            rRNAs                             :: 9, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 34 of 115
            Pseudo Genes (incomplete)         :: 93 of 115
            Pseudo Genes (internal stop)      :: 4 of 115
            Pseudo Genes (multiple problems)  :: 15 of 115
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8578249
                     /organism="Kitasatospora cineracea"
                     /mol_type="genomic DNA"
                     /strain="DSM 44781"
                     /culture_collection="DSM:44781"
                     /type_material="type strain of Kitasatospora niigatensis"
                     /db_xref="taxon:88074"
WGS         RKQG01000001-RKQG01000007
WGS_SCAFLD  NZ_RKQG01000001-NZ_RKQG01000007
//
LOCUS       NZ_JAGFWS010000000   2284292 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lactobacillus crispatus strain Lc-G22, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAGFWS000000000
VERSION     NZ_JAGFWS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN18395719
            Assembly: GCF_017599225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactobacillus crispatus
  ORGANISM  Lactobacillus crispatus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (bases 1 to 2284292)
  AUTHORS   Xu,Y., Song,J. and Han,D.
  TITLE     Draft Genome Sequence of Lactobacillus crispatus Lc-G22, a
            Commercialization Strain (Biogrowing Co., Ltd)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2284292)
  AUTHORS   Xu,Y., Song,J. and Han,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-MAR-2021) Basic Research Basic Research Department,
            Research and Development Center, Biogrowing Co., Ltd., No. 10666
            Songze Road, Shanghai 201700, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGFWS000000000.1.
            The Lactobacillus crispatus whole genome shotgun (WGS) project has
            the project accession NZ_JAGFWS000000000.  This version of the
            project (01) has the accession number NZ_JAGFWS010000000, and
            consists of sequences JAGFWS010000001-JAGFWS010000255.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 633.82x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017599225.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:56:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,509
            CDSs (total)                      :: 2,431
            Genes (coding)                    :: 2,225
            CDSs (with protein)               :: 2,225
            Genes (RNA)                       :: 78
            rRNAs                             :: 6, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 3, 2 (5S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 206
            CDSs (without protein)            :: 206
            Pseudo Genes (ambiguous residues) :: 0 of 206
            Pseudo Genes (frameshifted)       :: 46 of 206
            Pseudo Genes (incomplete)         :: 148 of 206
            Pseudo Genes (internal stop)      :: 27 of 206
            Pseudo Genes (multiple problems)  :: 15 of 206
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2284292
                     /organism="Lactobacillus crispatus"
                     /mol_type="genomic DNA"
                     /strain="Lc-G22"
                     /isolation_source="feces"
                     /db_xref="taxon:47770"
                     /geo_loc_name="China"
                     /collection_date="2017-04"
WGS         JAGFWS010000001-JAGFWS010000255
WGS_SCAFLD  NZ_JAGFWS010000001-NZ_JAGFWS010000255
//
LOCUS       NZ_JAKTCH010000000   2182257 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lactococcus petauri strain LSSP153, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAKTCH000000000
VERSION     NZ_JAKTCH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN26111052
            Assembly: GCF_022427765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactococcus petauri
  ORGANISM  Lactococcus petauri
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Lactococcus.
REFERENCE   1  (bases 1 to 2182257)
  AUTHORS   Li,J.
  TITLE     The Streptococcus suis genomes of diseased pigs in China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2182257)
  AUTHORS   Li,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2022) College of Food Sciences & Technology,
            Huazhong Agricultural University, No. 1, Shizishan Street, Wuhan,
            Hubei 430070, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKTCH000000000.1.
            The Lactococcus petauri whole genome shotgun (WGS) project has the
            project accession NZ_JAKTCH000000000.  This version of the project
            (01) has the accession number NZ_JAKTCH010000000, and consists of
            sequences JAKTCH010000001-JAKTCH010000030.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 500x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022427765.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:11:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,205
            CDSs (total)                      :: 2,146
            Genes (coding)                    :: 2,112
            CDSs (with protein)               :: 2,112
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 18 of 34
            Pseudo Genes (incomplete)         :: 16 of 34
            Pseudo Genes (internal stop)      :: 4 of 34
            Pseudo Genes (multiple problems)  :: 3 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2182257
                     /organism="Lactococcus petauri"
                     /mol_type="genomic DNA"
                     /strain="LSSP153"
                     /isolation_source="joint"
                     /host="Sus scrofa"
                     /db_xref="taxon:1940789"
                     /geo_loc_name="China: Guangdong"
                     /lat_lon="39.56 N 116.20 E"
                     /collection_date="2017-08"
                     /collected_by="Huazhong Agricultural University"
WGS         JAKTCH010000001-JAKTCH010000030
WGS_SCAFLD  NZ_JAKTCH010000001-NZ_JAKTCH010000030
//
LOCUS       NZ_JACOAE020000000   1938307 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lactobacillus paragasseri strain UBLG-36, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JACOAE000000000
VERSION     NZ_JACOAE000000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15733757
            Assembly: GCF_014269295.2
KEYWORDS    WGS; RefSeq.
SOURCE      Lactobacillus paragasseri
  ORGANISM  Lactobacillus paragasseri
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (bases 1 to 1938307)
  AUTHORS   Mehra,Y. and Viswanathan,P.
  TITLE     Draft genome sequence of Lactobacillus paragasseri UBLG-36
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1938307)
  AUTHORS   Mehra,Y. and Viswanathan,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-OCT-2020) Renal Research Laboratory, School of
            BioScience and Technology, Vellore Institute of Technology, VIT,
            Vellore Campus, Tiruvalam Rd, Katpadi, Vellore, Tamil Nadu 632014,
            India
REFERENCE   3  (bases 1 to 1938307)
  AUTHORS   Mehra,Y. and Viswanathan,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-AUG-2020) Department of Bioscience, Vellore Institute
            of Technology, VIT, Vellore Campus, Tiruvalam Rd, Katpadi, Vellore,
            Tamil nadu 632014, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JACOAE000000000.2.
            
            On Apr 3, 2021 this sequence version replaced NZ_JACOAE000000000.1.
            The Lactobacillus paragasseri whole genome shotgun (WGS) project
            has the project accession NZ_JACOAE000000000.  This version of the
            project (02) has the accession number NZ_JACOAE020000000, and
            consists of sequences JACOAE020000001-JACOAE020000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Prof Pragasam Viswanathan,
            Renal Research Lab, School of Bio Sciences and Technology, Vellore
            Institute of Technology, Vellore -632014, Tamil Nadu, India. Email
            id: pragasam.v@vit.ac.in.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 21-MAR-2021
            Assembly Method       :: Unicycler v. 0.4.8.0
            Genome Coverage       :: 339x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_014269295.2-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:08:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,935
            CDSs (total)                      :: 1,877
            Genes (coding)                    :: 1,814
            CDSs (with protein)               :: 1,814
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 32 of 63
            Pseudo Genes (incomplete)         :: 28 of 63
            Pseudo Genes (internal stop)      :: 13 of 63
            Pseudo Genes (multiple problems)  :: 10 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1938307
                     /organism="Lactobacillus paragasseri"
                     /mol_type="genomic DNA"
                     /strain="UBLG-36"
                     /isolation_source="gut"
                     /host="Homo sapiens"
                     /db_xref="taxon:2107999"
                     /geo_loc_name="India: Hyderabad"
                     /collection_date="2015-07-02"
                     /collected_by="Vellore Institute of Technology"
WGS         JACOAE020000001-JACOAE020000005
WGS_SCAFLD  NZ_JACOAE020000001-NZ_JACOAE020000005
//
LOCUS       NZ_JAGGCP010000000   4587633 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira interrogans serovar Copenhageni strain S199/4, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JAGGCP000000000
VERSION     NZ_JAGGCP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN18471242
            Assembly: GCF_017653755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira interrogans serovar Copenhageni
  ORGANISM  Leptospira interrogans serovar Copenhageni
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4587633)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Comparative genomic analysis of European sttrains of Leptospira
            interrogans serovars Copenhageni and Icterohaemorrhagiae
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4587633)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAR-2021) Center for Experimental and Innovative
            Medicine, University of Agriculture in Krakow, Mickiewicza 21,
            Krakow 31-120, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGGCP000000000.1.
            The Leptospira interrogans serovar Copenhageni whole genome shotgun
            (WGS) project has the project accession NZ_JAGGCP000000000.  This
            version of the project (01) has the accession number
            NZ_JAGGCP010000000, and consists of sequences
            JAGGCP010000001-JAGGCP010000120.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 61x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017653755.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:07:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,798
            CDSs (total)                      :: 3,756
            Genes (coding)                    :: 3,641
            CDSs (with protein)               :: 3,641
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 73 of 115
            Pseudo Genes (incomplete)         :: 67 of 115
            Pseudo Genes (internal stop)      :: 22 of 115
            Pseudo Genes (multiple problems)  :: 37 of 115
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4587633
                     /organism="Leptospira interrogans serovar Copenhageni"
                     /mol_type="genomic DNA"
                     /strain="S199/4"
                     /serovar="Copenhageni"
                     /isolation_source="kidney"
                     /host="rat"
                     /db_xref="taxon:44275"
                     /geo_loc_name="United Kingdom"
                     /collection_date="1977"
WGS         JAGGCP010000001-JAGGCP010000120
WGS_SCAFLD  NZ_JAGGCP010000001-NZ_JAGGCP010000120
//
LOCUS       NZ_JAGGCJ010000000   4577904 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira interrogans serovar Copenhageni strain B167, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JAGGCJ000000000
VERSION     NZ_JAGGCJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN18471236
            Assembly: GCF_017653985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira interrogans serovar Copenhageni
  ORGANISM  Leptospira interrogans serovar Copenhageni
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4577904)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Comparative genomic analysis of European sttrains of Leptospira
            interrogans serovars Copenhageni and Icterohaemorrhagiae
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4577904)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAR-2021) Center for Experimental and Innovative
            Medicine, University of Agriculture in Krakow, Mickiewicza 21,
            Krakow 31-120, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGGCJ000000000.1.
            The Leptospira interrogans serovar Copenhageni whole genome shotgun
            (WGS) project has the project accession NZ_JAGGCJ000000000.  This
            version of the project (01) has the accession number
            NZ_JAGGCJ010000000, and consists of sequences
            JAGGCJ010000001-JAGGCJ010000120.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 93x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017653985.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:14:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,778
            CDSs (total)                      :: 3,736
            Genes (coding)                    :: 3,618
            CDSs (with protein)               :: 3,618
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 77 of 118
            Pseudo Genes (incomplete)         :: 68 of 118
            Pseudo Genes (internal stop)      :: 22 of 118
            Pseudo Genes (multiple problems)  :: 39 of 118
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4577904
                     /organism="Leptospira interrogans serovar Copenhageni"
                     /mol_type="genomic DNA"
                     /strain="B167"
                     /serovar="Copenhageni"
                     /isolation_source="kidney"
                     /host="badger"
                     /db_xref="taxon:44275"
                     /geo_loc_name="United Kingdom"
                     /collection_date="1981"
WGS         JAGGCJ010000001-JAGGCJ010000120
WGS_SCAFLD  NZ_JAGGCJ010000001-NZ_JAGGCJ010000120
//
LOCUS       NZ_JAGGCC010000000   4586699 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira interrogans serovar Icterohaemorrhagiae strain B126,
            whole genome shotgun sequencing project.
ACCESSION   NZ_JAGGCC000000000
VERSION     NZ_JAGGCC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN18471229
            Assembly: GCF_017654005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira interrogans serovar Icterohaemorrhagiae
  ORGANISM  Leptospira interrogans serovar Icterohaemorrhagiae
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4586699)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Comparative genomic analysis of European sttrains of Leptospira
            interrogans serovars Copenhageni and Icterohaemorrhagiae
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4586699)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAR-2021) Center for Experimental and Innovative
            Medicine, University of Agriculture in Krakow, Mickiewicza 21,
            Krakow 31-120, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGGCC000000000.1.
            The Leptospira interrogans serovar Icterohaemorrhagiae whole genome
            shotgun (WGS) project has the project accession NZ_JAGGCC000000000.
            This version of the project (01) has the accession number
            NZ_JAGGCC010000000, and consists of sequences
            JAGGCC010000001-JAGGCC010000131.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 65x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017654005.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:11:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,789
            CDSs (total)                      :: 3,747
            Genes (coding)                    :: 3,625
            CDSs (with protein)               :: 3,625
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 122
            CDSs (without protein)            :: 122
            Pseudo Genes (ambiguous residues) :: 0 of 122
            Pseudo Genes (frameshifted)       :: 78 of 122
            Pseudo Genes (incomplete)         :: 70 of 122
            Pseudo Genes (internal stop)      :: 22 of 122
            Pseudo Genes (multiple problems)  :: 38 of 122
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4586699
                     /organism="Leptospira interrogans serovar
                     Icterohaemorrhagiae"
                     /mol_type="genomic DNA"
                     /strain="B126"
                     /serovar="Icterohaemorrhagiae"
                     /isolation_source="kidney"
                     /host="badger"
                     /db_xref="taxon:90062"
                     /geo_loc_name="United Kingdom"
                     /collection_date="1977"
WGS         JAGGCC010000001-JAGGCC010000131
WGS_SCAFLD  NZ_JAGGCC010000001-NZ_JAGGCC010000131
//
LOCUS       NZ_JAGGCE010000000   4588004 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira interrogans serovar Copenhageni strain S199/12, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JAGGCE000000000
VERSION     NZ_JAGGCE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN18471231
            Assembly: GCF_017654085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira interrogans serovar Copenhageni
  ORGANISM  Leptospira interrogans serovar Copenhageni
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4588004)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Comparative genomic analysis of European sttrains of Leptospira
            interrogans serovars Copenhageni and Icterohaemorrhagiae
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4588004)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAR-2021) Center for Experimental and Innovative
            Medicine, University of Agriculture in Krakow, Mickiewicza 21,
            Krakow 31-120, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGGCE000000000.1.
            The Leptospira interrogans serovar Copenhageni whole genome shotgun
            (WGS) project has the project accession NZ_JAGGCE000000000.  This
            version of the project (01) has the accession number
            NZ_JAGGCE010000000, and consists of sequences
            JAGGCE010000001-JAGGCE010000129.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 66x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017654085.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:16:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,798
            CDSs (total)                      :: 3,756
            Genes (coding)                    :: 3,637
            CDSs (with protein)               :: 3,637
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 75 of 119
            Pseudo Genes (incomplete)         :: 70 of 119
            Pseudo Genes (internal stop)      :: 23 of 119
            Pseudo Genes (multiple problems)  :: 39 of 119
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4588004
                     /organism="Leptospira interrogans serovar Copenhageni"
                     /mol_type="genomic DNA"
                     /strain="S199/12"
                     /serovar="Copenhageni"
                     /isolation_source="kidney"
                     /host="rat"
                     /db_xref="taxon:44275"
                     /geo_loc_name="United Kingdom"
                     /collection_date="1977"
WGS         JAGGCE010000001-JAGGCE010000129
WGS_SCAFLD  NZ_JAGGCE010000001-NZ_JAGGCE010000129
//
LOCUS       NZ_JAGGCI010000000   4588840 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira interrogans serovar Copenhageni strain S199/3, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JAGGCI000000000
VERSION     NZ_JAGGCI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN18471235
            Assembly: GCF_017654025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira interrogans serovar Copenhageni
  ORGANISM  Leptospira interrogans serovar Copenhageni
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4588840)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Comparative genomic analysis of European sttrains of Leptospira
            interrogans serovars Copenhageni and Icterohaemorrhagiae
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4588840)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAR-2021) Center for Experimental and Innovative
            Medicine, University of Agriculture in Krakow, Mickiewicza 21,
            Krakow 31-120, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGGCI000000000.1.
            The Leptospira interrogans serovar Copenhageni whole genome shotgun
            (WGS) project has the project accession NZ_JAGGCI000000000.  This
            version of the project (01) has the accession number
            NZ_JAGGCI010000000, and consists of sequences
            JAGGCI010000001-JAGGCI010000121.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 67x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017654025.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:16:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,789
            CDSs (total)                      :: 3,747
            Genes (coding)                    :: 3,631
            CDSs (with protein)               :: 3,631
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 116
            CDSs (without protein)            :: 116
            Pseudo Genes (ambiguous residues) :: 0 of 116
            Pseudo Genes (frameshifted)       :: 73 of 116
            Pseudo Genes (incomplete)         :: 68 of 116
            Pseudo Genes (internal stop)      :: 23 of 116
            Pseudo Genes (multiple problems)  :: 38 of 116
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4588840
                     /organism="Leptospira interrogans serovar Copenhageni"
                     /mol_type="genomic DNA"
                     /strain="S199/3"
                     /serovar="Copenhageni"
                     /isolation_source="kidney"
                     /host="rat"
                     /db_xref="taxon:44275"
                     /geo_loc_name="United Kingdom"
                     /collection_date="1977"
WGS         JAGGCI010000001-JAGGCI010000121
WGS_SCAFLD  NZ_JAGGCI010000001-NZ_JAGGCI010000121
//
LOCUS       NZ_CACRTK010000000   2917453 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus rhamnosus isolate LrhamnosusLFYP97, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CACRTK000000000
VERSION     NZ_CACRTK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6160282
            Assembly: GCF_902652215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1
  AUTHORS   Feng,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-NOV-2019) The Edison Family Center of Genome Sciences
            and Systems Biology, Dr. Jeffrey I. Gordon, 4523 Clayton Avenue,
            Campus Box 8510, St. Louis, MO 63110, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CACRTK000000000.1.
            The Lacticaseibacillus rhamnosus whole genome shotgun (WGS) project
            has the project accession NZ_CACRTK000000000.  This version of the
            project (01) has the accession number NZ_CACRTK010000000, and
            consists of sequences CACRTK010000001-CACRTK010000063.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902652215.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:47:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,691
            Genes (coding)                    :: 2,633
            CDSs (with protein)               :: 2,633
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 58
            CDSs (without protein)            :: 58
            Pseudo Genes (ambiguous residues) :: 0 of 58
            Pseudo Genes (frameshifted)       :: 19 of 58
            Pseudo Genes (incomplete)         :: 36 of 58
            Pseudo Genes (internal stop)      :: 7 of 58
            Pseudo Genes (multiple problems)  :: 3 of 58
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2917453
                     /organism="Lacticaseibacillus rhamnosus"
                     /mol_type="genomic DNA"
                     /isolate="LrhamnosusLFYP97"
                     /db_xref="taxon:47715"
WGS         CACRTK010000001-CACRTK010000063
WGS_SCAFLD  NZ_CACRTK010000001-NZ_CACRTK010000063
//
LOCUS       NZ_JAGGCK010000000   4589463 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira interrogans serovar Icterohaemorrhagiae strain X240,
            whole genome shotgun sequencing project.
ACCESSION   NZ_JAGGCK000000000
VERSION     NZ_JAGGCK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN18471237
            Assembly: GCF_017653925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira interrogans serovar Icterohaemorrhagiae
  ORGANISM  Leptospira interrogans serovar Icterohaemorrhagiae
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4589463)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Comparative genomic analysis of European sttrains of Leptospira
            interrogans serovars Copenhageni and Icterohaemorrhagiae
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4589463)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAR-2021) Center for Experimental and Innovative
            Medicine, University of Agriculture in Krakow, Mickiewicza 21,
            Krakow 31-120, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGGCK000000000.1.
            The Leptospira interrogans serovar Icterohaemorrhagiae whole genome
            shotgun (WGS) project has the project accession NZ_JAGGCK000000000.
            This version of the project (01) has the accession number
            NZ_JAGGCK010000000, and consists of sequences
            JAGGCK010000001-JAGGCK010000126.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 54x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017653925.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:16:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,787
            CDSs (total)                      :: 3,745
            Genes (coding)                    :: 3,628
            CDSs (with protein)               :: 3,628
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 75 of 117
            Pseudo Genes (incomplete)         :: 69 of 117
            Pseudo Genes (internal stop)      :: 22 of 117
            Pseudo Genes (multiple problems)  :: 39 of 117
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4589463
                     /organism="Leptospira interrogans serovar
                     Icterohaemorrhagiae"
                     /mol_type="genomic DNA"
                     /strain="X240"
                     /serovar="Icterohaemorrhagiae"
                     /isolation_source="eye"
                     /host="dog"
                     /db_xref="taxon:90062"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2000"
WGS         JAGGCK010000001-JAGGCK010000126
WGS_SCAFLD  NZ_JAGGCK010000001-NZ_JAGGCK010000126
//
LOCUS       NZ_JAGGCD010000000   4584815 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira interrogans serovar Copenhageni strain S1006, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JAGGCD000000000
VERSION     NZ_JAGGCD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN18471230
            Assembly: GCF_017654105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira interrogans serovar Copenhageni
  ORGANISM  Leptospira interrogans serovar Copenhageni
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4584815)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Comparative genomic analysis of European sttrains of Leptospira
            interrogans serovars Copenhageni and Icterohaemorrhagiae
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4584815)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAR-2021) Center for Experimental and Innovative
            Medicine, University of Agriculture in Krakow, Mickiewicza 21,
            Krakow 31-120, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGGCD000000000.1.
            The Leptospira interrogans serovar Copenhageni whole genome shotgun
            (WGS) project has the project accession NZ_JAGGCD000000000.  This
            version of the project (01) has the accession number
            NZ_JAGGCD010000000, and consists of sequences
            JAGGCD010000001-JAGGCD010000124.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 78x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017654105.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:17:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,795
            CDSs (total)                      :: 3,753
            Genes (coding)                    :: 3,632
            CDSs (with protein)               :: 3,632
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 121
            Pseudo Genes (ambiguous residues) :: 0 of 121
            Pseudo Genes (frameshifted)       :: 76 of 121
            Pseudo Genes (incomplete)         :: 71 of 121
            Pseudo Genes (internal stop)      :: 22 of 121
            Pseudo Genes (multiple problems)  :: 38 of 121
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4584815
                     /organism="Leptospira interrogans serovar Copenhageni"
                     /mol_type="genomic DNA"
                     /strain="S1006"
                     /serovar="Copenhageni"
                     /isolation_source="kidney"
                     /host="badger"
                     /db_xref="taxon:44275"
                     /geo_loc_name="United Kingdom"
                     /collection_date="1975"
WGS         JAGGCD010000001-JAGGCD010000124
WGS_SCAFLD  NZ_JAGGCD010000001-NZ_JAGGCD010000124
//
LOCUS       NZ_JAGGCQ010000000   4586956 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira interrogans serovar Copenhageni strain B42, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JAGGCQ000000000
VERSION     NZ_JAGGCQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN18471243
            Assembly: GCF_017653785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira interrogans serovar Copenhageni
  ORGANISM  Leptospira interrogans serovar Copenhageni
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4586956)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Comparative genomic analysis of European sttrains of Leptospira
            interrogans serovars Copenhageni and Icterohaemorrhagiae
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4586956)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAR-2021) Center for Experimental and Innovative
            Medicine, University of Agriculture in Krakow, Mickiewicza 21,
            Krakow 31-120, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGGCQ000000000.1.
            The Leptospira interrogans serovar Copenhageni whole genome shotgun
            (WGS) project has the project accession NZ_JAGGCQ000000000.  This
            version of the project (01) has the accession number
            NZ_JAGGCQ010000000, and consists of sequences
            JAGGCQ010000001-JAGGCQ010000119.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 55x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017653785.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:16:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,784
            CDSs (total)                      :: 3,742
            Genes (coding)                    :: 3,627
            CDSs (with protein)               :: 3,627
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 76 of 115
            Pseudo Genes (incomplete)         :: 66 of 115
            Pseudo Genes (internal stop)      :: 22 of 115
            Pseudo Genes (multiple problems)  :: 39 of 115
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4586956
                     /organism="Leptospira interrogans serovar Copenhageni"
                     /mol_type="genomic DNA"
                     /strain="B42"
                     /serovar="Copenhageni"
                     /isolation_source="kidney"
                     /host="badger"
                     /db_xref="taxon:44275"
                     /geo_loc_name="United Kingdom"
                     /collection_date="1977"
WGS         JAGGCQ010000001-JAGGCQ010000119
WGS_SCAFLD  NZ_JAGGCQ010000001-NZ_JAGGCQ010000119
//
LOCUS       NZ_RJVJ01000000      8759731 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Kitasatospora cineracea strain DSM 44780, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RJVJ00000000
VERSION     NZ_RJVJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10363103
            Assembly: GCF_003751605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kitasatospora cineracea
  ORGANISM  Kitasatospora cineracea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Kitasatospora.
REFERENCE   1  (bases 1 to 8759731)
  AUTHORS   Klenk,H.-P.
  TITLE     Sequencing the genomes of 1000 actinobacteria strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8759731)
  AUTHORS   Klenk,H.-P., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-NOV-2018) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RJVJ00000000.1.
            The Kitasatospora cineracea whole genome shotgun (WGS) project has
            the project accession NZ_RJVJ00000000.  This version of the project
            (01) has the accession number NZ_RJVJ01000000, and consists of
            sequences RJVJ01000001-RJVJ01000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. smrtanalysis/2.3.0_p5, HGAP 3
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 52.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003751605.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:10:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,808
            CDSs (total)                      :: 7,704
            Genes (coding)                    :: 7,518
            CDSs (with protein)               :: 7,518
            Genes (RNA)                       :: 104
            rRNAs                             :: 9, 9, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 8 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 73
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 74 of 186
            Pseudo Genes (incomplete)         :: 127 of 186
            Pseudo Genes (internal stop)      :: 8 of 186
            Pseudo Genes (multiple problems)  :: 21 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8759731
                     /organism="Kitasatospora cineracea"
                     /mol_type="genomic DNA"
                     /strain="DSM 44780"
                     /culture_collection="DSM:44780"
                     /type_material="type strain of Kitasatospora cineracea"
                     /db_xref="taxon:88074"
WGS         RJVJ01000001-RJVJ01000005
WGS_SCAFLD  NZ_RJVJ01000001-NZ_RJVJ01000005
//
LOCUS       NZ_JAGGCH010000000   4590762 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira interrogans serovar Copenhageni strain S199/5, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JAGGCH000000000
VERSION     NZ_JAGGCH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN18471234
            Assembly: GCF_017654055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira interrogans serovar Copenhageni
  ORGANISM  Leptospira interrogans serovar Copenhageni
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4590762)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Comparative genomic analysis of European sttrains of Leptospira
            interrogans serovars Copenhageni and Icterohaemorrhagiae
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4590762)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAR-2021) Center for Experimental and Innovative
            Medicine, University of Agriculture in Krakow, Mickiewicza 21,
            Krakow 31-120, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGGCH000000000.1.
            The Leptospira interrogans serovar Copenhageni whole genome shotgun
            (WGS) project has the project accession NZ_JAGGCH000000000.  This
            version of the project (01) has the accession number
            NZ_JAGGCH010000000, and consists of sequences
            JAGGCH010000001-JAGGCH010000124.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 73x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017654055.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:18:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,800
            CDSs (total)                      :: 3,758
            Genes (coding)                    :: 3,640
            CDSs (with protein)               :: 3,640
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 74 of 118
            Pseudo Genes (incomplete)         :: 71 of 118
            Pseudo Genes (internal stop)      :: 22 of 118
            Pseudo Genes (multiple problems)  :: 39 of 118
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4590762
                     /organism="Leptospira interrogans serovar Copenhageni"
                     /mol_type="genomic DNA"
                     /strain="S199/5"
                     /serovar="Copenhageni"
                     /isolation_source="kidney"
                     /host="rat"
                     /db_xref="taxon:44275"
                     /geo_loc_name="United Kingdom"
                     /collection_date="1977"
WGS         JAGGCH010000001-JAGGCH010000124
WGS_SCAFLD  NZ_JAGGCH010000001-NZ_JAGGCH010000124
//
LOCUS       NZ_JAGGCO010000000   4589348 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira interrogans serovar Icterohaemorrhagiae strain S199/2,
            whole genome shotgun sequencing project.
ACCESSION   NZ_JAGGCO000000000
VERSION     NZ_JAGGCO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN18471241
            Assembly: GCF_017653805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira interrogans serovar Icterohaemorrhagiae
  ORGANISM  Leptospira interrogans serovar Icterohaemorrhagiae
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4589348)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Comparative genomic analysis of European sttrains of Leptospira
            interrogans serovars Copenhageni and Icterohaemorrhagiae
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4589348)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAR-2021) Center for Experimental and Innovative
            Medicine, University of Agriculture in Krakow, Mickiewicza 21,
            Krakow 31-120, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGGCO000000000.1.
            The Leptospira interrogans serovar Icterohaemorrhagiae whole genome
            shotgun (WGS) project has the project accession NZ_JAGGCO000000000.
            This version of the project (01) has the accession number
            NZ_JAGGCO010000000, and consists of sequences
            JAGGCO010000001-JAGGCO010000130.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 62x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017653805.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:20:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,801
            CDSs (total)                      :: 3,759
            Genes (coding)                    :: 3,638
            CDSs (with protein)               :: 3,638
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 121
            Pseudo Genes (ambiguous residues) :: 0 of 121
            Pseudo Genes (frameshifted)       :: 76 of 121
            Pseudo Genes (incomplete)         :: 71 of 121
            Pseudo Genes (internal stop)      :: 22 of 121
            Pseudo Genes (multiple problems)  :: 38 of 121
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4589348
                     /organism="Leptospira interrogans serovar
                     Icterohaemorrhagiae"
                     /mol_type="genomic DNA"
                     /strain="S199/2"
                     /serovar="Icterohaemorrhagiae"
                     /isolation_source="kidney"
                     /host="rat"
                     /db_xref="taxon:90062"
                     /geo_loc_name="United Kingdom"
                     /collection_date="1977"
WGS         JAGGCO010000001-JAGGCO010000130
WGS_SCAFLD  NZ_JAGGCO010000001-NZ_JAGGCO010000130
//
LOCUS       NZ_JAKYNL010000000   1627397 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Helicobacter pylori strain A81C(1), whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAKYNL000000000
VERSION     NZ_JAKYNL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN26012817
            Assembly: GCF_037862315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori
  ORGANISM  Helicobacter pylori
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1627397)
  AUTHORS   Das,B., Mehrotra,T., Kumar,S., Talukdar,D., Karmakar,B.C., Paul,S.,
            Ramamurthy,T. and Mukhopadyay,A.K.
  TITLE     Molecular Insights into the Evolution of Multidrug-Resistant
            Helicobacter pylori
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1627397)
  AUTHORS   Das,B., Mehrotra,T., Kumar,S., Talukdar,D., Karmakar,B.C., Paul,S.,
            Ramamurthy,T. and Mukhopadyay,A.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-FEB-2022) Infection and Immunology, Translational
            Health Science and Technology Institute, Gurgaon-Faridabad
            Expressway, Faridabad, Haryana 121001, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKYNL000000000.1.
            The Helicobacter pylori whole genome shotgun (WGS) project has the
            project accession NZ_JAKYNL000000000.  This version of the project
            (01) has the accession number NZ_JAKYNL010000000, and consists of
            sequences JAKYNL010000001-JAKYNL010000031.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-OCT-2020
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 87x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037862315.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:43:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,578
            CDSs (total)                      :: 1,536
            Genes (coding)                    :: 1,470
            CDSs (with protein)               :: 1,470
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 40 of 66
            Pseudo Genes (incomplete)         :: 26 of 66
            Pseudo Genes (internal stop)      :: 12 of 66
            Pseudo Genes (multiple problems)  :: 12 of 66
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627397
                     /organism="Helicobacter pylori"
                     /mol_type="genomic DNA"
                     /strain="A81C(1)"
                     /isolation_source="Gastrointestinal tract Biopsy"
                     /host="Homo sapiens"
                     /db_xref="taxon:210"
                     /geo_loc_name="India: Kolkata, AMRI Hospital, Saltlake"
                     /lat_lon="22.30 N 88.22 E"
                     /collection_date="2019-06-12"
                     /collected_by="Department of Gastroenterology, AMRI
                     Hospital, Saltlake, Kolkata"
WGS         JAKYNL010000001-JAKYNL010000031
WGS_SCAFLD  NZ_JAKYNL010000001-NZ_JAKYNL010000031
//
LOCUS       NZ_JAGGCL010000000   4589111 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leptospira interrogans serovar Copenhageni strain W26, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JAGGCL000000000
VERSION     NZ_JAGGCL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN18471238
            Assembly: GCF_017653845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leptospira interrogans serovar Copenhageni
  ORGANISM  Leptospira interrogans serovar Copenhageni
            Bacteria; Pseudomonadati; Spirochaetota; Leptospiria;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4589111)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Comparative genomic analysis of European sttrains of Leptospira
            interrogans serovars Copenhageni and Icterohaemorrhagiae
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4589111)
  AUTHORS   Arent,Z., Gurgul,A., Jasielczuk,I. and Pardyak,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAR-2021) Center for Experimental and Innovative
            Medicine, University of Agriculture in Krakow, Mickiewicza 21,
            Krakow 31-120, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGGCL000000000.1.
            The Leptospira interrogans serovar Copenhageni whole genome shotgun
            (WGS) project has the project accession NZ_JAGGCL000000000.  This
            version of the project (01) has the accession number
            NZ_JAGGCL010000000, and consists of sequences
            JAGGCL010000001-JAGGCL010000126.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 59x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017653845.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:23:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,795
            CDSs (total)                      :: 3,753
            Genes (coding)                    :: 3,641
            CDSs (with protein)               :: 3,641
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 73 of 112
            Pseudo Genes (incomplete)         :: 66 of 112
            Pseudo Genes (internal stop)      :: 22 of 112
            Pseudo Genes (multiple problems)  :: 39 of 112
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4589111
                     /organism="Leptospira interrogans serovar Copenhageni"
                     /mol_type="genomic DNA"
                     /strain="W26"
                     /serovar="Copenhageni"
                     /isolation_source="kidney"
                     /host="hedgehog"
                     /db_xref="taxon:44275"
                     /geo_loc_name="United Kingdom"
                     /collection_date="1990"
WGS         JAGGCL010000001-JAGGCL010000126
WGS_SCAFLD  NZ_JAGGCL010000001-NZ_JAGGCL010000126
//
LOCUS       NZ_VNTC01000000      6147693 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella michiganensis strain 620278998915, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VNTC00000000
VERSION     NZ_VNTC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12212086
            Assembly: GCF_020117535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 6147693)
  AUTHORS   Cuenod,A., Wuthrich,D., Seth-Smith,H.M.B., Ott,C., Gehringer,C.,
            Foucault,F., Mouchet,R., Kassim,A., Revathi,G., Vogt,D.R., von
            Felten,S., Bassetti,S., Tschudin-Sutter,S., Hettich,T.,
            Schlotterbeck,G., Homberger,C., Casanova,C., Moran-Gilad,J.,
            Sagi,O., Rodriguez-Sanchez,B., Muller,F., Aerni,M., Gaia,V., van
            Dessel,H., Kampinga,G.A., Muller,C., Daubenberger,C., Pfluger,V.
            and Egli,A.
  TITLE     Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal
            importance of Klebsiella oxytoca group in invasive infections: a
            retrospective clinical study
  JOURNAL   Genome Med 13 (1), 150 (2021)
   PUBMED   34517886
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6147693)
  AUTHORS   Cuenod,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2019) Department of Biomedicine, University of
            Basel, Hebelstrasse 20, Basel, BS 4051, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VNTC00000000.1.
            The Klebsiella michiganensis whole genome shotgun (WGS) project has
            the project accession NZ_VNTC00000000.  This version of the project
            (01) has the accession number NZ_VNTC01000000, and consists of
            sequences VNTC01000001-VNTC01000089.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 60x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_020117535.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:38:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,853
            CDSs (total)                      :: 5,763
            Genes (coding)                    :: 5,650
            CDSs (with protein)               :: 5,650
            Genes (RNA)                       :: 90
            rRNAs                             :: 2, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4 (23S)
            tRNAs                             :: 75
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 113
            CDSs (without protein)            :: 113
            Pseudo Genes (ambiguous residues) :: 0 of 113
            Pseudo Genes (frameshifted)       :: 35 of 113
            Pseudo Genes (incomplete)         :: 90 of 113
            Pseudo Genes (internal stop)      :: 8 of 113
            Pseudo Genes (multiple problems)  :: 18 of 113
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6147693
                     /organism="Klebsiella michiganensis"
                     /mol_type="genomic DNA"
                     /strain="620278998915"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:1134687"
                     /geo_loc_name="Switzerland"
                     /lat_lon="47.591077 N 7.652974 E"
                     /collection_date="2017"
WGS         VNTC01000001-VNTC01000089
WGS_SCAFLD  NZ_VNTC01000001-NZ_VNTC01000089
//
LOCUS       NZ_JAJPDM010000000   2943370 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus rhamnosus strain Mo2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJPDM000000000
VERSION     NZ_JAJPDM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23708205
            Assembly: GCF_028878125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 2943370)
  AUTHORS   Colautti,A., Rossi,N., Piazza,C., Comi,G. and Iacumin,L.
  TITLE     Draft genome sequences of 14 Lacticaseibacilli, representatives of
            a collection of 200 strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2943370)
  AUTHORS   Colautti,A., Rossi,N. and Iacumin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-DEC-2021) DI4A, University of Udine, Via Sondrio 2/A,
            Udine 33100, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJPDM000000000.1.
            The Lacticaseibacillus rhamnosus whole genome shotgun (WGS) project
            has the project accession NZ_JAJPDM000000000.  This version of the
            project (01) has the accession number NZ_JAJPDM010000000, and
            consists of sequences JAJPDM010000001-JAJPDM010000063.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_028878125.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:45:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,778
            CDSs (total)                      :: 2,711
            Genes (coding)                    :: 2,652
            CDSs (with protein)               :: 2,652
            Genes (RNA)                       :: 67
            rRNAs                             :: 4, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 56
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 20 of 59
            Pseudo Genes (incomplete)         :: 37 of 59
            Pseudo Genes (internal stop)      :: 7 of 59
            Pseudo Genes (multiple problems)  :: 4 of 59
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2943370
                     /organism="Lacticaseibacillus rhamnosus"
                     /mol_type="genomic DNA"
                     /strain="Mo2"
                     /host="Homo sapiens"
                     /db_xref="taxon:47715"
                     /geo_loc_name="Italy"
                     /collection_date="2012-01-30"
WGS         JAJPDM010000001-JAJPDM010000063
WGS_SCAFLD  NZ_JAJPDM010000001-NZ_JAJPDM010000063
//
LOCUS       NZ_JBBNTU010000000   5839542 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella variicola strain S2023380, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBNTU000000000
VERSION     NZ_JBBNTU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40181870
            Assembly: GCF_038374995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella variicola
  ORGANISM  Klebsiella variicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5839542)
  AUTHORS   Yan,W.
  TITLE     Etiologic characteristic of hypervirulent Klebsiella pneumoniae
            based on whole genome sequencing analysis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5839542)
  AUTHORS   Yan,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-FEB-2024) Microbiological laboratory, Huzhou CDC, 999
            Changxing Road, Huzhou, Zhejiang 313000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBNTU000000000.1.
            The Klebsiella variicola whole genome shotgun (WGS) project has the
            project accession NZ_JBBNTU000000000.  This version of the project
            (01) has the accession number NZ_JBBNTU010000000, and consists of
            sequences JBBNTU010000001-JBBNTU010000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038374995.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:07:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,708
            CDSs (total)                      :: 5,611
            Genes (coding)                    :: 5,503
            CDSs (with protein)               :: 5,503
            Genes (RNA)                       :: 97
            rRNAs                             :: 6, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 3, 1, 3 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 45 of 108
            Pseudo Genes (incomplete)         :: 61 of 108
            Pseudo Genes (internal stop)      :: 26 of 108
            Pseudo Genes (multiple problems)  :: 21 of 108
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5839542
                     /organism="Klebsiella variicola"
                     /mol_type="genomic DNA"
                     /strain="S2023380"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:244366"
                     /geo_loc_name="China: Huzhou"
                     /lat_lon="30.58 N 119.63 E"
                     /collection_date="2023"
                     /collected_by="Huzhou CDC"
WGS         JBBNTU010000001-JBBNTU010000026
WGS_SCAFLD  NZ_JBBNTU010000001-NZ_JBBNTU010000026
//
LOCUS       NZ_JARWLJ010000000   5071708 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Gordonia alkanivorans strain 134, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARWLJ000000000
VERSION     NZ_JARWLJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34194813
            Assembly: GCF_029853965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Gordonia alkanivorans
  ORGANISM  Gordonia alkanivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Gordoniaceae; Gordonia.
REFERENCE   1  (bases 1 to 5071708)
  AUTHORS   Frantsuzova,E., Bogun,A., Vetrova,A. and Delegan,Y.
  TITLE     Pangenome analysis and physiological characterization of Gordonia
            alkanivorans strains capable of utilizing persistent organic
            pollutants
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5071708)
  AUTHORS   Frantsuzova,E., Bogun,A., Vetrova,A. and Delegan,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-APR-2023) Laboratory of Physiology of Microrganisms,
            Ibpm Ras, Prospekt Nauki 5, Puschino, Moscow Region 142290, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARWLJ000000000.1.
            The Gordonia alkanivorans whole genome shotgun (WGS) project has
            the project accession NZ_JARWLJ000000000.  This version of the
            project (01) has the accession number NZ_JARWLJ010000000, and
            consists of sequences JARWLJ010000001-JARWLJ010000075.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: DEC-2022
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 328x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029853965.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:10:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,648
            CDSs (total)                      :: 4,592
            Genes (coding)                    :: 4,492
            CDSs (with protein)               :: 4,492
            Genes (RNA)                       :: 56
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 44 of 100
            Pseudo Genes (incomplete)         :: 62 of 100
            Pseudo Genes (internal stop)      :: 7 of 100
            Pseudo Genes (multiple problems)  :: 13 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5071708
                     /organism="Gordonia alkanivorans"
                     /mol_type="genomic DNA"
                     /strain="134"
                     /isolation_source="crude oil-contaminated soil"
                     /culture_collection="IEGM:IEGM134"
                     /db_xref="taxon:84096"
                     /geo_loc_name="Ukraine: Lvov"
                     /collection_date="1980"
WGS         JARWLJ010000001-JARWLJ010000075
WGS_SCAFLD  NZ_JARWLJ010000001-NZ_JARWLJ010000075
//
LOCUS       NZ_JALKXZ010000000   5567535 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella variicola strain JS-47, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JALKXZ000000000
VERSION     NZ_JALKXZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN26241685
            Assembly: GCF_029525685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella variicola
  ORGANISM  Klebsiella variicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5567535)
  AUTHORS   Zhou,J.
  TITLE     Molecular characteristic of Klebsiella spp. causing invasive
            infection in hospital patients in China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5567535)
  AUTHORS   Li,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-FEB-2022) State Key Laboratory of Infectious Disease
            Prevention and Control, Institute for Communicable Disease Control
            and Prevention, Chinese Center for Disease Control and Pr, Changbai
            road 155, Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALKXZ000000000.1.
            The Klebsiella variicola whole genome shotgun (WGS) project has the
            project accession NZ_JALKXZ000000000.  This version of the project
            (01) has the accession number NZ_JALKXZ010000000, and consists of
            sequences JALKXZ010000001-JALKXZ010000022.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029525685.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:17:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,402
            CDSs (total)                      :: 5,308
            Genes (coding)                    :: 5,196
            CDSs (with protein)               :: 5,196
            Genes (RNA)                       :: 94
            rRNAs                             :: 7, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 44 of 112
            Pseudo Genes (incomplete)         :: 65 of 112
            Pseudo Genes (internal stop)      :: 24 of 112
            Pseudo Genes (multiple problems)  :: 18 of 112
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5567535
                     /organism="Klebsiella variicola"
                     /mol_type="genomic DNA"
                     /strain="JS-47"
                     /isolation_source="bile"
                     /host="Homo sapiens"
                     /db_xref="taxon:244366"
                     /geo_loc_name="China: JiangSu"
                     /collection_date="2019"
                     /collected_by="Institute for Communicable Disease Control
                     and Prevention, Chinese Center for Disease Control and
                     Prevention"
WGS         JALKXZ010000001-JALKXZ010000022
WGS_SCAFLD  NZ_JALKXZ010000001-NZ_JALKXZ010000022
//
LOCUS       NZ_AEAW01000000      2018630 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Limosilactobacillus reuteri subsp. pararodentium strain mlc3, whole
            genome shotgun sequencing project.
ACCESSION   NZ_AEAW00000000
VERSION     NZ_AEAW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02471903
            Assembly: GCF_000179435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Limosilactobacillus reuteri subsp. pararodentium
  ORGANISM  Limosilactobacillus reuteri subsp. pararodentium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Limosilactobacillus.
REFERENCE   1  (bases 1 to 2018630)
  AUTHORS   Frese,S.A., Benson,A.K., Tannock,G.W., Loach,D.M., Kim,J.,
            Zhang,M., Oh,P.L., Heng,N.C., Patil,P.B., Juge,N., Mackenzie,D.A.,
            Pearson,B.M., Lapidus,A., Dalin,E., Tice,H., Goltsman,E., Land,M.,
            Hauser,L., Ivanova,N., Kyrpides,N.C. and Walter,J.
  TITLE     The evolution of host specialization in the vertebrate gut symbiont
            Lactobacillus reuteri
  JOURNAL   PLoS Genet 7 (2), e1001314 (2011)
   PUBMED   21379339
REFERENCE   2  (bases 1 to 2018630)
  AUTHORS   Frese,S.A., Benson,A.K., Tannock,G.W., Loach,D.M., Kim,J.,
            Zhang,M., Oh,P.L., Patil,P.B., Lapidus,A., Heng,N.C.K., Dalin,E.,
            Tice,H., Goltsman,E., Land,M., Hauser,L., Ivanova,N., Kyrpides,N.C.
            and Walter,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2010) Department of Food Science and Technology,
            University of Nebraska - Lincoln, 143 Food Industry Complex,
            Lincoln, NE 68583-0919, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AEAW00000000.1.
            The Limosilactobacillus reuteri subsp. pararodentium whole genome
            shotgun (WGS) project has the project accession NZ_AEAW00000000.
            This version of the project (01) has the accession number
            NZ_AEAW01000000, and consists of sequences
            AEAW01000001-AEAW01000126.
            Source DNA available from Dr. Jens Walter, Department of Food
            Science and Technology, University of Nebraska Lincoln.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: gsAssembler v. 2.3
            Genome Coverage       :: 20x
            Sequencing Technology :: 454 Titanium
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000179435.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 09:53:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,040
            CDSs (total)                      :: 1,959
            Genes (coding)                    :: 1,891
            CDSs (with protein)               :: 1,891
            Genes (RNA)                       :: 81
            rRNAs                             :: 1, 9, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 9, 3 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 30 of 68
            Pseudo Genes (incomplete)         :: 21 of 68
            Pseudo Genes (internal stop)      :: 24 of 68
            Pseudo Genes (multiple problems)  :: 7 of 68
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2018630
                     /organism="Limosilactobacillus reuteri subsp.
                     pararodentium"
                     /mol_type="genomic DNA"
                     /strain="mlc3"
                     /host="rodent"
                     /sub_species="pararodentium"
                     /type_material="type strain of Limosilactobacillus reuteri
                     subsp. pararodentium"
                     /db_xref="taxon:863369"
WGS         AEAW01000001-AEAW01000126
WGS_SCAFLD  NZ_AEAW01000001-NZ_AEAW01000126
//
LOCUS       NZ_AEBA01000000      2044602 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Ligilactobacillus salivarius ACS-116-V-Col5a, whole genome shotgun
            sequencing project.
ACCESSION   NZ_AEBA00000000
VERSION     NZ_AEBA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00017035
            Assembly: GCF_000179475.1
KEYWORDS    WGS; HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Ligilactobacillus salivarius ACS-116-V-Col5a
  ORGANISM  Ligilactobacillus salivarius ACS-116-V-Col5a
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 2044602)
  AUTHORS   Durkin,A.S., Madupu,R., Torralba,M., Methe,B., Sutton,G. and
            Nelson,K.E.
  TITLE     Genome Sequence of Lactobacillus salivarius ACS-116-V-Col5a
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2044602)
  AUTHORS   Durkin,A.S., Madupu,R., Torralba,M., Methe,B., Sutton,G. and
            Nelson,K.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2010) The J. Craig Venter Institute, 9704 Medical
            Center Dr., Rockville, MD 20850, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AEBA00000000.1.
            The Ligilactobacillus salivarius ACS-116-V-Col5a whole genome
            shotgun (WGS) project has the project accession NZ_AEBA00000000.
            This version of the project (01) has the accession number
            NZ_AEBA01000000, and consists of sequences
            AEBA01000001-AEBA01000154.
            This is a reference genome for the Human Microbiome Project. This
            project is co-owned with the Human Microbiome Project DACC.
            Product names were updated in June 2013.
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: High-Quality Draft
            Current Finishing Status :: High-Quality Draft
            Assembly Method          :: Newbler v. 2.3
            Genome Coverage          :: 28x
            Sequencing Technology    :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000179475.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 09:56:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,137
            CDSs (total)                      :: 2,076
            Genes (coding)                    :: 1,972
            CDSs (with protein)               :: 1,972
            Genes (RNA)                       :: 61
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 104
            CDSs (without protein)            :: 104
            Pseudo Genes (ambiguous residues) :: 0 of 104
            Pseudo Genes (frameshifted)       :: 69 of 104
            Pseudo Genes (incomplete)         :: 31 of 104
            Pseudo Genes (internal stop)      :: 13 of 104
            Pseudo Genes (multiple problems)  :: 9 of 104
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2044602
                     /organism="Ligilactobacillus salivarius ACS-116-V-Col5a"
                     /mol_type="genomic DNA"
                     /strain="ACS-116-V-Col5a"
                     /isolation_source="biological product [ENVO:02000043]"
                     /host="Homo sapiens"
                     /db_xref="taxon:768728"
WGS         AEBA01000001-AEBA01000154
WGS_SCAFLD  NZ_AEBA01000001-NZ_AEBA01000154
//
LOCUS       NZ_AODK01000000      3216749 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Listeria rocourtiae FSL F6-920, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AODK00000000
VERSION     NZ_AODK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02671250
            Assembly: GCF_000525975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria rocourtiae FSL F6-920
  ORGANISM  Listeria rocourtiae FSL F6-920
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Listeriaceae; Paenilisteria.
REFERENCE   1  (bases 1 to 3216749)
  AUTHORS   den Bakker,H.C., Allred,A., Warchocki,S., Wright,E.M., Burrell,A.,
            Nightingale,K.K., Kephart,D. and Wiedmann,M.
  TITLE     Novel taxa of Listeriaceae from agricultural environments in the
            United States
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3216749)
  AUTHORS   den Bakker,H.C., Allred,A., Warchocki,S., Wright,E.M., Burrell,A.,
            Nightingale,K.K., Kephart,D. and Wiedmann,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-DEC-2012) Food Science, Cornell University, Stocking
            Hall, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AODK00000000.1.
            The Listeria rocourtiae FSL F6-920 whole genome shotgun (WGS)
            project has the project accession NZ_AODK00000000.  This version of
            the project (01) has the accession number NZ_AODK01000000, and
            consists of sequences AODK01000001-AODK01000126.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 3.4.1
            Genome Coverage       :: 45.0x
            Sequencing Technology :: IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000525975.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:10:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,405
            CDSs (total)                      :: 3,330
            Genes (coding)                    :: 2,930
            CDSs (with protein)               :: 2,930
            Genes (RNA)                       :: 75
            rRNAs                             :: 6, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 2 (5S, 16S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 400
            CDSs (without protein)            :: 400
            Pseudo Genes (ambiguous residues) :: 0 of 400
            Pseudo Genes (frameshifted)       :: 348 of 400
            Pseudo Genes (incomplete)         :: 59 of 400
            Pseudo Genes (internal stop)      :: 7 of 400
            Pseudo Genes (multiple problems)  :: 14 of 400
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3216749
                     /organism="Listeria rocourtiae FSL F6-920"
                     /mol_type="genomic DNA"
                     /strain="FSL F6-920"
                     /culture_collection="CIP:109804"
                     /type_material="type strain of Listeria rocourtiae"
                     /db_xref="taxon:1265846"
WGS         AODK01000001-AODK01000126
WGS_SCAFLD  NZ_AODK01000001-NZ_AODK01000126
//
LOCUS       NZ_LDTQ01000000      2890421 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mammaliicoccus sciuri strain RSA37, whole genome shotgun sequencing
            project.
ACCESSION   NZ_LDTQ00000000
VERSION     NZ_LDTQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03401361
            Assembly: GCF_001476585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (bases 1 to 2890421)
  AUTHORS   Midha,S., Bansal,K., Sharma,S., Kumar,N., Patil,P.P., Chaudhry,V.
            and Patil,P.B.
  TITLE     Genomic Resource of Rice Seed Associated Bacteria
  JOURNAL   Front Microbiol 6, 1551 (2016)
   PUBMED   26793183
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2890421)
  AUTHORS   Midha,S., Bansal,K., Chaudhry,V., Sharma,S., Kumar,N., Patil,P.P.
            and Patil,P.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2015) Bacterial Genomics and Evolution
            Laboratory, CSIR-Institute of Microbial Technology, Sector 39A,
            Chandigarh, Chandigarh 160036, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LDTQ00000000.1.
            The Mammaliicoccus sciuri whole genome shotgun (WGS) project has
            the project accession NZ_LDTQ00000000.  This version of the project
            (01) has the accession number NZ_LDTQ01000000, and consists of
            sequences LDTQ01000001-LDTQ01000072.
            Source DNA available from Bacterial Genomics and Evolutionary
            Laboratory, CSIR-Institute of Microbial Technology, Chandigarh,
            India.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 7.5
            Genome Coverage       :: 130x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001476585.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:06:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,983
            CDSs (total)                      :: 2,922
            Genes (coding)                    :: 2,890
            CDSs (with protein)               :: 2,890
            Genes (RNA)                       :: 61
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 13 of 32
            Pseudo Genes (incomplete)         :: 19 of 32
            Pseudo Genes (internal stop)      :: 10 of 32
            Pseudo Genes (multiple problems)  :: 8 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2890421
                     /organism="Mammaliicoccus sciuri"
                     /mol_type="genomic DNA"
                     /strain="RSA37"
                     /host="Oryza sativa"
                     /db_xref="taxon:1296"
                     /geo_loc_name="India"
                     /collection_date="2013"
WGS         LDTQ01000001-LDTQ01000072
WGS_SCAFLD  NZ_LDTQ01000001-NZ_LDTQ01000072
//
LOCUS       NZ_AWXZ01000000      4300776 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lutibaculum baratangense AMV1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AWXZ00000000
VERSION     NZ_AWXZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02469419
            Assembly: GCF_000496075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lutibaculum baratangense AMV1
  ORGANISM  Lutibaculum baratangense AMV1
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Tepidamorphaceae; Lutibaculum.
REFERENCE   1  (bases 1 to 4300776)
  AUTHORS   Singh,A., Sreenivas,A., Sathyanarayana Reddy,G., Pinnaka,A.K. and
            Shivaji,S.
  TITLE     Draft Genome Sequence of Lutibaculum baratangense Strain AMV1T,
            Isolated from a Mud Volcano in Andamans, India
  JOURNAL   Genome Announc 2 (4), e00735-14 (2014)
   PUBMED   25059877
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4300776)
  AUTHORS   Singh,A., Shivaji,S. and Pinnaka,A.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-SEP-2013) Microbiology, Center for Cellular and
            Molecular Biology, Uppal Road, Hyderabad, Andhra Pradesh 500007,
            India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AWXZ00000000.1.
            The Lutibaculum baratangense AMV1 whole genome shotgun (WGS)
            project has the project accession NZ_AWXZ00000000.  This version of
            the project (01) has the accession number NZ_AWXZ01000000, and
            consists of sequences AWXZ01000001-AWXZ01000044.
            Bacteria available from Sisinthy Shivaji, Centre for Cellular &
            Molecular Biology, Habsiguda, Uppal Road, Hyderabad - 500007,
            Andhra Pradesh, India. Source DNA available from Sisinthy Shivaji,
            Centre for Cellular & Molecular Biology, Habsiguda, Uppal Road,
            Hyderabad - 500007, Andhra Pradesh, India.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: GS De Novo Assembler v. 2.8
            Assembly Name         :: LuBa1.0
            Long Assembly Name    :: Lutibaculum baratangense AMV1 1.0
            Genome Coverage       :: 16.0x
            Sequencing Technology :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000496075.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:22:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,144
            CDSs (total)                      :: 4,086
            Genes (coding)                    :: 4,032
            CDSs (with protein)               :: 4,032
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 55
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 55
            Pseudo Genes (frameshifted)       :: 19 of 55
            Pseudo Genes (incomplete)         :: 38 of 55
            Pseudo Genes (internal stop)      :: 5 of 55
            Pseudo Genes (multiple problems)  :: 7 of 55
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4300776
                     /organism="Lutibaculum baratangense AMV1"
                     /mol_type="genomic DNA"
                     /strain="AMV1"
                     /isolation_source="mud volcano"
                     /type_material="type strain of Lutibaculum baratangense"
                     /db_xref="taxon:631454"
                     /geo_loc_name="India: Baratang Island, Andamans"
WGS         AWXZ01000001-AWXZ01000044
WGS_SCAFLD  NZ_AWXZ01000001-NZ_AWXZ01000044
//
LOCUS       NZ_FYBQ01000000      2891166 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Listeria goaensis strain ILCC801, whole genome shotgun sequencing
            project.
ACCESSION   NZ_FYBQ00000000
VERSION     NZ_FYBQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA104121265
            Assembly: GCF_900186125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria goaensis
  ORGANISM  Listeria goaensis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Listeriaceae; Listeria.
REFERENCE   1
  AUTHORS   Doijad,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JUN-2017) JUSTUS LIEBIG UNIVERSITY, Biomedizinisches
            Forschungszentrum Seltersberg, Schubertstr. 81, Giessen 35392,
            Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FYBQ00000000.1.
            The Listeria goaensis whole genome shotgun (WGS) project has the
            project accession NZ_FYBQ00000000.  This version of the project
            (01) has the accession number NZ_FYBQ01000000, and consists of
            sequences FYBQ01000001-FYBQ01000024.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900186125.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:03:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,925
            CDSs (total)                      :: 2,866
            Genes (coding)                    :: 2,837
            CDSs (with protein)               :: 2,837
            Genes (RNA)                       :: 59
            rRNAs                             :: 5, 1 (5S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 10 of 29
            Pseudo Genes (incomplete)         :: 18 of 29
            Pseudo Genes (internal stop)      :: 4 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2891166
                     /organism="Listeria goaensis"
                     /mol_type="genomic DNA"
                     /strain="ILCC801"
                     /type_material="type strain of Listeria goaensis"
                     /db_xref="taxon:1649188"
WGS         FYBQ01000001-FYBQ01000024
WGS_SCAFLD  NZ_FYBQ01000001-NZ_FYBQ01000024
//
LOCUS       NZ_MWIJ01000000      2148567 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Limosilactobacillus reuteri strain LR0, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MWIJ00000000
VERSION     NZ_MWIJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06364940
            Assembly: GCF_002156605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Limosilactobacillus reuteri
  ORGANISM  Limosilactobacillus reuteri
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Limosilactobacillus.
REFERENCE   1  (bases 1 to 2148567)
  AUTHORS   Di Rienzi,S., Jacobson,J., Kennedy,E., Bell,M., Lawrence,P.,
            Brenna,J. and Ley,R.
  TITLE     Resistance to soybean oil unsaturated fatty acids in Lactobacilli
            evolved within and outside a host
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2148567)
  AUTHORS   Di Rienzi,S., Jacobson,J., Kennedy,E., Bell,M., Lawrence,P.,
            Brenna,J. and Ley,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-FEB-2017) Molecular Biology and Genetics, Cornell
            University, 526 Campus Rd., Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MWIJ00000000.1.
            The Limosilactobacillus reuteri whole genome shotgun (WGS) project
            has the project accession NZ_MWIJ00000000.  This version of the
            project (01) has the accession number NZ_MWIJ01000000, and consists
            of sequences MWIJ01000001-MWIJ01000075.
            Bacteria and source DNA available from Ruth Ley.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method           :: SPAdes v. 3.7.1
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: GCA_000439275.1
            Genome Coverage           :: 850.0x
            Sequencing Technology     :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002156605.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:35:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,148
            CDSs (total)                      :: 2,058
            Genes (coding)                    :: 2,020
            CDSs (with protein)               :: 2,020
            Genes (RNA)                       :: 90
            rRNAs                             :: 6, 5, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 5, 4 (16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 38
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 12 of 39
            Pseudo Genes (incomplete)         :: 19 of 39
            Pseudo Genes (internal stop)      :: 12 of 39
            Pseudo Genes (multiple problems)  :: 5 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148567
                     /organism="Limosilactobacillus reuteri"
                     /mol_type="genomic DNA"
                     /strain="LR0"
                     /isolation_source="jejunum from mouse on 7% by weight (16%
                     by calorie) soybean oil diet"
                     /host="Mus musculus"
                     /db_xref="taxon:1598"
                     /geo_loc_name="USA: New York"
                     /collection_date="2015-02-15"
                     /collected_by="Sara Di Rienzi"
WGS         MWIJ01000001-MWIJ01000075
WGS_SCAFLD  NZ_MWIJ01000001-NZ_MWIJ01000075
//
LOCUS       NZ_FQZT01000000      3961631 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Malonomonas rubra DSM 5091, whole genome shotgun sequencing
            project.
ACCESSION   NZ_FQZT00000000
VERSION     NZ_FQZT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02745165
            Assembly: GCF_900142125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Malonomonas rubra DSM 5091
  ORGANISM  Malonomonas rubra DSM 5091
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Desulfuromonadales; Geopsychrobacteraceae;
            Malonomonas.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FQZT00000000.1.
            The Malonomonas rubra DSM 5091 whole genome shotgun (WGS) project
            has the project accession NZ_FQZT00000000.  This version of the
            project (01) has the accession number NZ_FQZT01000000, and consists
            of sequences FQZT01000001-FQZT01000042.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900142125.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:39:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,718
            CDSs (total)                      :: 3,663
            Genes (coding)                    :: 3,627
            CDSs (with protein)               :: 3,627
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 4 of 36
            Pseudo Genes (incomplete)         :: 29 of 36
            Pseudo Genes (internal stop)      :: 4 of 36
            Pseudo Genes (multiple problems)  :: 1 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3961631
                     /organism="Malonomonas rubra DSM 5091"
                     /mol_type="genomic DNA"
                     /strain="DSM 5091"
                     /type_material="type strain of Malonomonas rubra"
                     /db_xref="taxon:1122189"
                     /geo_loc_name="Italy:Canal Grande, Venice"
WGS         FQZT01000001-FQZT01000042
WGS_SCAFLD  NZ_FQZT01000001-NZ_FQZT01000042
//
LOCUS       NZ_PZGY01000000      2764091 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mammaliicoccus sciuri strain SNUC 3899, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PZGY00000000
VERSION     NZ_PZGY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06173138
            Assembly: GCF_003041895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (bases 1 to 2764091)
  AUTHORS   Naushad,S., Barkema,H.W., Luby,C., Condas,L.A., Nobrega,D.B.,
            Carson,D.A. and De Buck,J.
  TITLE     Comprehensive Phylogenetic Analysis of Bovine Non-aureus
            Staphylococci Species Based on Whole-Genome Sequencing
  JOURNAL   Front Microbiol 7, 1990 (2016)
   PUBMED   28066335
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2764091)
  AUTHORS   Naushad,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAR-2018) Production Animal Health, University of
            Calgary, 3330 Hospital Drive NW, Calgary, Alberta T2N 4N1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PZGY00000000.1.
            The Mammaliicoccus sciuri whole genome shotgun (WGS) project has
            the project accession NZ_PZGY00000000.  This version of the project
            (01) has the accession number NZ_PZGY01000000, and consists of
            sequences PZGY01000001-PZGY01000165.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 31x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003041895.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:39:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,883
            CDSs (total)                      :: 2,809
            Genes (coding)                    :: 2,774
            CDSs (with protein)               :: 2,774
            Genes (RNA)                       :: 74
            rRNAs                             :: 4, 6, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5 (16S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 2 of 35
            Pseudo Genes (incomplete)         :: 32 of 35
            Pseudo Genes (internal stop)      :: 2 of 35
            Pseudo Genes (multiple problems)  :: 1 of 35
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2764091
                     /organism="Mammaliicoccus sciuri"
                     /mol_type="genomic DNA"
                     /strain="SNUC 3899"
                     /isolation_source="Herd 209"
                     /host="Bos taurus"
                     /db_xref="taxon:1296"
                     /geo_loc_name="Canada: Ontario"
                     /collection_date="2007-08-05"
                     /collected_by="Canadian Bovine Mastitis Research Network
                     (CBMRN)"
WGS         PZGY01000001-PZGY01000165
WGS_SCAFLD  NZ_PZGY01000001-NZ_PZGY01000165
//
LOCUS       NZ_QYIW01000000      2887103 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mammaliicoccus sciuri strain SNUC 3363, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QYIW00000000
VERSION     NZ_QYIW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06173137
            Assembly: GCF_003580365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (bases 1 to 2887103)
  AUTHORS   Naushad,S., Barkema,H.W., Luby,C., Condas,L.A., Nobrega,D.B.,
            Carson,D.A. and De Buck,J.
  TITLE     Comprehensive Phylogenetic Analysis of Bovine Non-aureus
            Staphylococci Species Based on Whole-Genome Sequencing
  JOURNAL   Front Microbiol 7, 1990 (2016)
   PUBMED   28066335
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2887103)
  AUTHORS   Naushad,S. and De Buck,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2018) Production Animal Health, University of
            Calgary, 3330 Hospital Drive NW, Calgary, Alberta T2N 4N1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QYIW00000000.1.
            The Mammaliicoccus sciuri whole genome shotgun (WGS) project has
            the project accession NZ_QYIW00000000.  This version of the project
            (01) has the accession number NZ_QYIW01000000, and consists of
            sequences QYIW01000001-QYIW01000131.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 54x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003580365.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:59:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,964
            CDSs (total)                      :: 2,886
            Genes (coding)                    :: 2,852
            CDSs (with protein)               :: 2,852
            Genes (RNA)                       :: 78
            rRNAs                             :: 6, 7, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 6, 2 (16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 6 of 34
            Pseudo Genes (incomplete)         :: 30 of 34
            Pseudo Genes (internal stop)      :: 1 of 34
            Pseudo Genes (multiple problems)  :: 3 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2887103
                     /organism="Mammaliicoccus sciuri"
                     /mol_type="genomic DNA"
                     /strain="SNUC 3363"
                     /isolation_source="Herd 318"
                     /host="Bos taurus"
                     /db_xref="taxon:1296"
                     /geo_loc_name="Canada: Quebec"
                     /collection_date="2007-05-07"
                     /collected_by="Canadian Bovine Mastitis Research Network
                     (CBMRN)"
WGS         QYIW01000001-QYIW01000131
WGS_SCAFLD  NZ_QYIW01000001-NZ_QYIW01000131
//
LOCUS       NZ_PXXX01000000      4574203 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lysinibacillus capsici strain PB300, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PXXX00000000
VERSION     NZ_PXXX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08683512
            Assembly: GCF_003367505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Lysinibacillus.
REFERENCE   1  (bases 1 to 4574203)
  AUTHORS   Dunlap,C., Burkett-Cadena,M. and Cadena,J.
  TITLE     Lysinibacillus capsici sp. nov., isolated from the rhizosphere of
            Chiltepin (Capsicum annuum var. glabriusculum)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4574203)
  AUTHORS   Dunlap,C., Burkett-Cadena,M. and Cadena,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2018) Crop Bioprotection Research Unit,
            NCAUR-ARS-USDA, 1815 N. University st, Peoria, IL 61604, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PXXX00000000.1.
            The Lysinibacillus capsici whole genome shotgun (WGS) project has
            the project accession NZ_PXXX00000000.  This version of the project
            (01) has the accession number NZ_PXXX01000000, and consists of
            sequences PXXX01000001-PXXX01000046.
            Bacteria and source DNA available from NRRL.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 11.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003367505.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:03:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,576
            CDSs (total)                      :: 4,492
            Genes (coding)                    :: 4,465
            CDSs (with protein)               :: 4,465
            Genes (RNA)                       :: 84
            rRNAs                             :: 6, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 23S)
            partial rRNAs                     :: 1, 4, 1 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 13 of 27
            Pseudo Genes (incomplete)         :: 16 of 27
            Pseudo Genes (internal stop)      :: 4 of 27
            Pseudo Genes (multiple problems)  :: 5 of 27
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4574203
                     /organism="Lysinibacillus capsici"
                     /mol_type="genomic DNA"
                     /strain="PB300"
                     /isolation_source="soil"
                     /host="Capsicum annuum"
                     /type_material="type material of Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
                     /geo_loc_name="USA: southern Arizona"
                     /lat_lon="32.6716 N 111.4587 W"
                     /collection_date="1970"
WGS         PXXX01000001-PXXX01000046
WGS_SCAFLD  NZ_PXXX01000001-NZ_PXXX01000046
//
LOCUS       NZ_SDGY01000000      1865044 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leuconostoc litchii strain MB7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_SDGY00000000
VERSION     NZ_SDGY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10786216
            Assembly: GCF_008107645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leuconostoc litchii
  ORGANISM  Leuconostoc litchii
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Leuconostoc.
REFERENCE   1  (bases 1 to 1865044)
  AUTHORS   Wang,L.-T.
  TITLE     Leuconostoc litchii sp. nov., a novel lactic acid bacterium
            isolated from lychee
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1865044)
  AUTHORS   Wang,L.-T.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JAN-2019) Bioresource Collection and Research Center,
            Food Industry Research and Development Institute, 331, Shin-Ping
            Road, P.O. Box 246, Hsinchu 30099, Taiwan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SDGY00000000.1.
            The Leuconostoc litchii whole genome shotgun (WGS) project has the
            project accession NZ_SDGY00000000.  This version of the project
            (01) has the accession number NZ_SDGY01000000, and consists of
            sequences SDGY01000001-SDGY01000013.
            Bacteria and source DNA available from BCRC.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1129.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_008107645.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:28:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,879
            CDSs (total)                      :: 1,826
            Genes (coding)                    :: 1,812
            CDSs (with protein)               :: 1,812
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 14
            CDSs (without protein)            :: 14
            Pseudo Genes (ambiguous residues) :: 0 of 14
            Pseudo Genes (frameshifted)       :: 4 of 14
            Pseudo Genes (incomplete)         :: 12 of 14
            Pseudo Genes (internal stop)      :: 2 of 14
            Pseudo Genes (multiple problems)  :: 3 of 14
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1865044
                     /organism="Leuconostoc litchii"
                     /mol_type="genomic DNA"
                     /strain="MB7"
                     /isolation_source="Lychee"
                     /type_material="type strain of Leuconostoc litchii Chen et
                     al."
                     /db_xref="taxon:1981069"
                     /geo_loc_name="Taiwan: Taoyuan city"
                     /collection_date="2016-08-18"
WGS         SDGY01000001-SDGY01000013
WGS_SCAFLD  NZ_SDGY01000001-NZ_SDGY01000013
//
LOCUS       NZ_VSVK01000000      1921759 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Ligilactobacillus salivarius strain FJLHD25M7, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VSVK00000000
VERSION     NZ_VSVK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12616916
            Assembly: GCF_009863605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ligilactobacillus salivarius
  ORGANISM  Ligilactobacillus salivarius
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 1921759)
  AUTHORS   Zhai,Q., Shen,X., Cen,S., Zhang,C., Tian,F., Zhao,J., Zhang,H.,
            Xue,Y. and Chen,W.
  TITLE     Screening of Lactobacillus salivarius strains from the feces of
            Chinese populations and the evaluation of their effects against
            intestinal inflammation in mice
  JOURNAL   Food Funct 11 (1), 221-235 (2020)
   PUBMED   31915776
REFERENCE   2  (bases 1 to 1921759)
  AUTHORS   Zhai,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-AUG-2019) School of Food Science and Technology,
            Jiangnan University, Jiangnan University, No. 1800 Lihu Ave., Wuxi,
            Jiangsu 214000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VSVK00000000.1.
            The Ligilactobacillus salivarius whole genome shotgun (WGS) project
            has the project accession NZ_VSVK00000000.  This version of the
            project (01) has the accession number NZ_VSVK01000000, and consists
            of sequences VSVK01000001-VSVK01000042.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 20x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009863605.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:47:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,852
            CDSs (total)                      :: 1,816
            Genes (coding)                    :: 1,781
            CDSs (with protein)               :: 1,781
            Genes (RNA)                       :: 36
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 30
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 18 of 35
            Pseudo Genes (incomplete)         :: 12 of 35
            Pseudo Genes (internal stop)      :: 13 of 35
            Pseudo Genes (multiple problems)  :: 6 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1921759
                     /organism="Ligilactobacillus salivarius"
                     /mol_type="genomic DNA"
                     /strain="FJLHD25M7"
                     /host="Homo sapiens"
                     /db_xref="taxon:1624"
                     /geo_loc_name="China"
WGS         VSVK01000001-VSVK01000042
WGS_SCAFLD  NZ_VSVK01000001-NZ_VSVK01000042
//
LOCUS       NZ_SZPT01000000      4505022 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lysinibacillus tabacifolii strain KCTC 33042, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SZPT00000000
VERSION     NZ_SZPT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11535467
            Assembly: GCF_005217585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lysinibacillus tabacifolii
  ORGANISM  Lysinibacillus tabacifolii
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Lysinibacillus.
REFERENCE   1  (bases 1 to 4505022)
  AUTHORS   Dunlap,C.
  TITLE     Lysinibacillus genome sequencing
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4505022)
  AUTHORS   Dunlap,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-APR-2019) Crop Bioprotection Research Unit,
            NCAUR-ARS-USDA, 1815 N. University St., Peoria, IL 61604, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SZPT00000000.1.
            The Lysinibacillus tabacifolii whole genome shotgun (WGS) project
            has the project accession NZ_SZPT00000000.  This version of the
            project (01) has the accession number NZ_SZPT01000000, and consists
            of sequences SZPT01000001-SZPT01000016.
            Bacteria and source DNA available from KCTC.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC Genomics Workbench v. 11.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 75.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005217585.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:45:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,433
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 4,287
            CDSs (with protein)               :: 4,287
            Genes (RNA)                       :: 101
            rRNAs                             :: 9, 2, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 5 (16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 45
            CDSs (without protein)            :: 45
            Pseudo Genes (ambiguous residues) :: 0 of 45
            Pseudo Genes (frameshifted)       :: 13 of 45
            Pseudo Genes (incomplete)         :: 33 of 45
            Pseudo Genes (internal stop)      :: 6 of 45
            Pseudo Genes (multiple problems)  :: 6 of 45
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4505022
                     /organism="Lysinibacillus tabacifolii"
                     /mol_type="genomic DNA"
                     /strain="KCTC 33042"
                     /isolation_source="Nicotiana tabacum"
                     /culture_collection="KCTC:33042"
                     /type_material="type strain of Lysinibacillus tabacifolii"
                     /db_xref="taxon:1173107"
                     /geo_loc_name="China: Yunnan province"
                     /collection_date="2010"
WGS         SZPT01000001-SZPT01000016
WGS_SCAFLD  NZ_SZPT01000001-NZ_SZPT01000016
//
LOCUS       NZ_CBAJWJ010000000   3113264 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Limnohabitans sp. isolate
            PELAGICS-MAG-m2-bin106001-FUNEE-SM-16jul20., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBAJWJ000000000
VERSION     NZ_CBAJWJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117452300
            Assembly: GCF_964727615.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Limnohabitans sp. (freshwater metagenome)
  ORGANISM  Limnohabitans sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Limnohabitans.
REFERENCE   1  (bases 1 to 3113264)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-DEC-2024) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBAJWJ000000000.1.
            The Limnohabitans sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBAJWJ000000000.  This version of the project
            (01) has the accession number NZ_CBAJWJ010000000, and consists of
            sequences CBAJWJ010000001-CBAJWJ010000051.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964727615.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:32:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,100
            CDSs (total)                      :: 3,060
            Genes (coding)                    :: 3,032
            CDSs (with protein)               :: 3,032
            Genes (RNA)                       :: 40
            rRNAs                             :: 1 (5S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 35
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 4 of 28
            Pseudo Genes (incomplete)         :: 25 of 28
            Pseudo Genes (internal stop)      :: 1 of 28
            Pseudo Genes (multiple problems)  :: 2 of 28
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3113264
                     /organism="Limnohabitans sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-m2-bin106001-FUNEE-SM-16jul20."
                     /isolation_source="Grosse Fuchskuhle NE lake"
                     /db_xref="taxon:1907725"
                     /environmental_sample
                     /geo_loc_name="Germany"
                     /collection_date="2020-07-16"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBAJWJ010000001-CBAJWJ010000051
WGS_SCAFLD  NZ_CBAJWJ010000001-NZ_CBAJWJ010000051
//
LOCUS       NZ_VSVV01000000      2008202 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Ligilactobacillus salivarius strain FCQNA25M6, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VSVV00000000
VERSION     NZ_VSVV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12616905
            Assembly: GCF_009863815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ligilactobacillus salivarius
  ORGANISM  Ligilactobacillus salivarius
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 2008202)
  AUTHORS   Zhai,Q., Shen,X., Cen,S., Zhang,C., Tian,F., Zhao,J., Zhang,H.,
            Xue,Y. and Chen,W.
  TITLE     Screening of Lactobacillus salivarius strains from the feces of
            Chinese populations and the evaluation of their effects against
            intestinal inflammation in mice
  JOURNAL   Food Funct 11 (1), 221-235 (2020)
   PUBMED   31915776
REFERENCE   2  (bases 1 to 2008202)
  AUTHORS   Zhai,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-AUG-2019) School of Food Science and Technology,
            Jiangnan University, Jiangnan University, No. 1800 Lihu Ave., Wuxi,
            Jiangsu 214000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VSVV00000000.1.
            The Ligilactobacillus salivarius whole genome shotgun (WGS) project
            has the project accession NZ_VSVV00000000.  This version of the
            project (01) has the accession number NZ_VSVV01000000, and consists
            of sequences VSVV01000001-VSVV01000134.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 20x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009863815.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:54:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,065
            CDSs (total)                      :: 2,015
            Genes (coding)                    :: 1,939
            CDSs (with protein)               :: 1,939
            Genes (RNA)                       :: 50
            rRNAs                             :: 2, 1, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 1, 5 (5S, 16S, 23S)
            tRNAs                             :: 38
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 25 of 76
            Pseudo Genes (incomplete)         :: 47 of 76
            Pseudo Genes (internal stop)      :: 16 of 76
            Pseudo Genes (multiple problems)  :: 11 of 76
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2008202
                     /organism="Ligilactobacillus salivarius"
                     /mol_type="genomic DNA"
                     /strain="FCQNA25M6"
                     /host="Homo sapiens"
                     /db_xref="taxon:1624"
                     /geo_loc_name="China"
WGS         VSVV01000001-VSVV01000134
WGS_SCAFLD  NZ_VSVV01000001-NZ_VSVV01000134
//
LOCUS       NZ_VSUK01000000      1891145 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Ligilactobacillus salivarius strain FXJCJ7_2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VSUK00000000
VERSION     NZ_VSUK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12616943
            Assembly: GCF_009866185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ligilactobacillus salivarius
  ORGANISM  Ligilactobacillus salivarius
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 1891145)
  AUTHORS   Zhai,Q., Shen,X., Cen,S., Zhang,C., Tian,F., Zhao,J., Zhang,H.,
            Xue,Y. and Chen,W.
  TITLE     Screening of Lactobacillus salivarius strains from the feces of
            Chinese populations and the evaluation of their effects against
            intestinal inflammation in mice
  JOURNAL   Food Funct 11 (1), 221-235 (2020)
   PUBMED   31915776
REFERENCE   2  (bases 1 to 1891145)
  AUTHORS   Zhai,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-AUG-2019) School of Food Science and Technology,
            Jiangnan University, Jiangnan University, No. 1800 Lihu Ave., Wuxi,
            Jiangsu 214000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VSUK00000000.1.
            The Ligilactobacillus salivarius whole genome shotgun (WGS) project
            has the project accession NZ_VSUK00000000.  This version of the
            project (01) has the accession number NZ_VSUK01000000, and consists
            of sequences VSUK01000001-VSUK01000039.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 20x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009866185.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,840
            CDSs (total)                      :: 1,799
            Genes (coding)                    :: 1,762
            CDSs (with protein)               :: 1,762
            Genes (RNA)                       :: 41
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 33
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 15 of 37
            Pseudo Genes (incomplete)         :: 19 of 37
            Pseudo Genes (internal stop)      :: 13 of 37
            Pseudo Genes (multiple problems)  :: 8 of 37
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1891145
                     /organism="Ligilactobacillus salivarius"
                     /mol_type="genomic DNA"
                     /strain="FXJCJ7_2"
                     /host="Homo sapiens"
                     /db_xref="taxon:1624"
                     /geo_loc_name="China"
WGS         VSUK01000001-VSUK01000039
WGS_SCAFLD  NZ_VSUK01000001-NZ_VSUK01000039
//
LOCUS       NZ_WQOG01000000      2567422 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Levilactobacillus brevis strain MCC633, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WQOG00000000
VERSION     NZ_WQOG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12147412
            Assembly: GCF_018784425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Levilactobacillus brevis
  ORGANISM  Levilactobacillus brevis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
REFERENCE   1  (bases 1 to 2567422)
  AUTHORS   Perez,M., Ntemiri,A., Tan,H., Harris,H.M.B., Roager,H.M.,
            Ribiere,C. and O'Toole,P.W.
  TITLE     A synthetic consortium of 100 gut commensals modulates the
            composition and function in a colon model of the microbiome of
            elderly subjects
  JOURNAL   Gut Microbes 13 (1), 1-19 (2021)
   PUBMED   33993839
REFERENCE   2  (bases 1 to 2567422)
  AUTHORS   Harris,H.M.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2019) Microbiology Department, University College
            Cork, Western road, Cork, Cork 0000, Ireland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WQOG00000000.1.
            The Levilactobacillus brevis whole genome shotgun (WGS) project has
            the project accession NZ_WQOG00000000.  This version of the project
            (01) has the accession number NZ_WQOG01000000, and consists of
            sequences WQOG01000001-WQOG01000244.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 155.951x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_018784425.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:10:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,660
            CDSs (total)                      :: 2,591
            Genes (coding)                    :: 2,477
            CDSs (with protein)               :: 2,477
            Genes (RNA)                       :: 69
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 114
            CDSs (without protein)            :: 114
            Pseudo Genes (ambiguous residues) :: 0 of 114
            Pseudo Genes (frameshifted)       :: 22 of 114
            Pseudo Genes (incomplete)         :: 90 of 114
            Pseudo Genes (internal stop)      :: 12 of 114
            Pseudo Genes (multiple problems)  :: 10 of 114
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2567422
                     /organism="Levilactobacillus brevis"
                     /mol_type="genomic DNA"
                     /strain="MCC633"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:1580"
                     /geo_loc_name="Ireland"
                     /lat_lon="51.8985 N 8.4756 W"
WGS         WQOG01000001-WQOG01000244
WGS_SCAFLD  NZ_WQOG01000001-NZ_WQOG01000244
//
LOCUS       NZ_JALGPL010000000   2805867 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mammaliicoccus sciuri strain GDQ20D70P_8, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JALGPL000000000
VERSION     NZ_JALGPL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27022992
            Assembly: GCF_022810105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (bases 1 to 2805867)
  AUTHORS   Egyir,B., Owusu-Nyantakyi,C., Amuasi,G.R., Amoa,F.A. and Dsani,E.
  TITLE     Genomic Analysis and Antimicrobial Resistance in Staphylococci
            Isolated from Livestock and Farm Attendants in Northern Ghana
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2805867)
  AUTHORS   Egyir,B., Owusu-Nyantakyi,C., Amuasi,G.R., Amoa,F.A. and Dsani,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-MAR-2022) Bacteriology, Noguchi Memorial Institute
            fir Medical Research, S Legon drive, Accra 00233, Ghana
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALGPL000000000.1.
            The Mammaliicoccus sciuri whole genome shotgun (WGS) project has
            the project accession NZ_JALGPL000000000.  This version of the
            project (01) has the accession number NZ_JALGPL010000000, and
            consists of sequences JALGPL010000001-JALGPL010000056.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 53x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022810105.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:23:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,835
            CDSs (total)                      :: 2,775
            Genes (coding)                    :: 2,742
            CDSs (with protein)               :: 2,742
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 7 of 33
            Pseudo Genes (incomplete)         :: 22 of 33
            Pseudo Genes (internal stop)      :: 8 of 33
            Pseudo Genes (multiple problems)  :: 4 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2805867
                     /organism="Mammaliicoccus sciuri"
                     /mol_type="genomic DNA"
                     /strain="GDQ20D70P_8"
                     /isolation_source="nasal swab"
                     /host="Ovis aries"
                     /db_xref="taxon:1296"
                     /geo_loc_name="Ghana: Northern region"
                     /collection_date="2018"
WGS         JALGPL010000001-JALGPL010000056
WGS_SCAFLD  NZ_JALGPL010000001-NZ_JALGPL010000056
//
LOCUS       NZ_ACDY02000000      1872773 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria cinerea ATCC 14685, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ACDY00000000
VERSION     NZ_ACDY00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00008837
            Assembly: GCF_000173895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria cinerea ATCC 14685
  ORGANISM  Neisseria cinerea ATCC 14685
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1872773)
  AUTHORS   Weinstock,G., Sodergren,E., Clifton,S., Fulton,L., Fulton,B.,
            Courtney,L., Fronick,C., Harrison,M., Strong,C., Farmer,C.,
            Delahaunty,K., Markovic,C., Hall,O., Minx,P., Tomlinson,C.,
            Mitreva,M., Nelson,J., Hou,S., Wollam,A., Pepin,K.H., Johnson,M.,
            Bhonagiri,V., Nash,W.E., Warren,W., Chinwalla,A., Mardis,E.R. and
            Wilson,R.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2009) Genome Sequencing Center, Washington
            University School of Medicine, 4444 Forest Park, St. Louis, MO
            63108, USA
REFERENCE   2  (bases 1 to 1872773)
  AUTHORS   Weinstock,G., Sodergren,E., Clifton,S., Fulton,L., Fulton,B.,
            Courtney,L., Fronick,C., Harrison,M., Strong,C., Farmer,C.,
            Delahaunty,K., Markovic,C., Hall,O., Minx,P., Tomlinson,C.,
            Mitreva,M., Nelson,J., Hou,S., Wollam,A., Pepin,K.H., Johnson,M.,
            Bhonagiri,V., Nash,W.E., Warren,W., Chinwalla,A., Mardis,E.R. and
            Wilson,R.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-SEP-2009) Genome Sequencing Center, Washington
            University School of Medicine, 4444 Forest Park, St. Louis, MO
            63108, USA
REFERENCE   3  (bases 1 to 1872773)
  AUTHORS   Fulton,L., Clifton,S., Chinwalla,A.T., Mitreva,M., Sodergren,E.,
            Weinstock,G., Clifton,S., Dooling,D.J., Fulton,B., Minx,P.,
            Pepin,K.H., Johnson,M., Bhonagiri,V., Nash,W.E., Mardis,E.R. and
            Wilson,R.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JAN-2009) Genome Sequencing Center, Washington
            University School of Medicine, 4444 Forest Park, St. Louis, MO
            63108, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ACDY00000000.2.
            
            On Sep 24, 2009 this sequence version replaced NZ_ACDY00000000.1.
            The Neisseria cinerea ATCC 14685 whole genome shotgun (WGS) project
            has the project accession NZ_ACDY00000000.  This version of the
            project (02) has the accession number NZ_ACDY02000000, and consists
            of sequences ACDY02000001-ACDY02000035.
            Neisseria cinerea (no 16S rDNA gene sequence available) is a member
            of the Proteobacteria division of the domain bacteria and has been
            isolated from the nasopharynx. The sequenced strain was obtained
            from Nathan Weyand ATCC 14685.
            
            We have performed one round of automated sequence improvement
            (pre-finishing), along with manual improvement that includes
            breaking apart any mis-assembly, and making manual joins where
            possible. Manual edits also are made where the consensus appears to
            be incorrect. All low quality data on the ends of contigs is
            removed. Contigs are ordered and oriented where possible.
            
            Coding sequences were predicted using GeneMark v3.3 and Glimmer2
            v2.13. Intergenic regions not spanned by GeneMark and Glimmer2 were
            blasted against NCBI's non-redundant (NR) database and predictions
            generated based on protein alignments. tRNA genes were determined
            using tRNAscan-SE 1.23 and non-coding RNA genes by RNAmmer-1.2 and
            Rfam v8.0. Gene names are generated at the contig level and may not
            necessarily reflect any known order or orientation between contigs.
            
            This work was supported by the National Human Genome Research
            Institute and the NIH Roadmap Human Microbiome Project
            [http://nihroadmap.nih.gov/hmp/].
            
            This is a reference genome for the Human Microbiome Project. This
            project is co-owned with the Human Microbiome Project DACC.
            Genome Coverage: 42.6x
            Sequencing Technology: 454
            
            Annotation was added to the contigs in November 2009.
            Product names were updated in June 2013.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000173895.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 09:50:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,848
            CDSs (total)                      :: 1,781
            Genes (coding)                    :: 1,716
            CDSs (with protein)               :: 1,716
            Genes (RNA)                       :: 67
            rRNAs                             :: 3, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 1 (16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 33 of 65
            Pseudo Genes (incomplete)         :: 35 of 65
            Pseudo Genes (internal stop)      :: 10 of 65
            Pseudo Genes (multiple problems)  :: 12 of 65
            CRISPR Arrays                     :: 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1872773
                     /organism="Neisseria cinerea ATCC 14685"
                     /mol_type="genomic DNA"
                     /strain="ATCC 14685"
                     /isolation_source="biological product [ENVO:02000043]"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:14685"
                     /type_material="type strain of Neisseria cinerea"
                     /db_xref="taxon:546262"
WGS         ACDY02000001-ACDY02000035
WGS_SCAFLD  NZ_ACDY02000001-NZ_ACDY02000035
//
LOCUS       NZ_CMYU01000000      2082823 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria meningitidis strain NM2244, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CMYU00000000
VERSION     NZ_CMYU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA1031636
            Assembly: GCF_001100565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1
  AUTHORS   Informatics,Pathogen.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-MAR-2015) SC, Wellcome Trust Sanger Institute, CB10
            1SA, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CMYU00000000.1.
            The Neisseria meningitidis whole genome shotgun (WGS) project has
            the project accession NZ_CMYU00000000.  This version of the project
            (01) has the accession number NZ_CMYU01000000, and consists of
            sequences CMYU01000001-CMYU01000137.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001100565.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 09:56:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,134
            CDSs (total)                      :: 2,079
            Genes (coding)                    :: 1,908
            CDSs (with protein)               :: 1,908
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 171
            CDSs (without protein)            :: 171
            Pseudo Genes (ambiguous residues) :: 0 of 171
            Pseudo Genes (frameshifted)       :: 66 of 171
            Pseudo Genes (incomplete)         :: 111 of 171
            Pseudo Genes (internal stop)      :: 19 of 171
            Pseudo Genes (multiple problems)  :: 23 of 171
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082823
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /strain="NM2244"
                     /serovar="Serogroup A"
                     /isolation_source="pharynx"
                     /db_xref="taxon:487"
                     /geo_loc_name="Burkina Faso:Nouna Health District"
                     /collection_date="2006"
WGS         CMYU01000001-CMYU01000137
WGS_SCAFLD  NZ_CMYU01000001-NZ_CMYU01000137
//
LOCUS       NZ_AZKE01000000      1843445 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni IOEB_9805, whole genome shotgun sequencing project.
ACCESSION   NZ_AZKE00000000
VERSION     NZ_AZKE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02902408
            Assembly: GCF_000761725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni IOEB_9805
  ORGANISM  Oenococcus oeni IOEB_9805
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 1843445)
  AUTHORS   Dimopoulou,M., Vuillemin,M., Campbell-Sills,H., Lucas,P.M.,
            Ballestra,P., Miot-Sertier,C., Favier,M., Coulon,J., Moine,V.,
            Doco,T., Roques,M., Williams,P., Petrel,M., Gontier,E., Moulis,C.,
            Remaud-Simeon,M. and Dols-Lafargue,M.
  TITLE     Exopolysaccharide (EPS) synthesis by Oenococcus oeni: from genes to
            phenotypes
  JOURNAL   PLoS One 9 (6), e98898 (2014)
   PUBMED   24901216
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843445)
  AUTHORS   Campbell-Sills,H., Favier,M., El Khouri,M., Dols-Lafargue,M. and
            Lucas,P.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2013) Microbiologie du Raisin et du Vin, Institut
            des Sciences de la Vigne et du Vin, 210 Chemin de Leysotte,
            Bordeaux, Aquitaine 33882, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AZKE00000000.1.
            The Oenococcus oeni IOEB_9805 whole genome shotgun (WGS) project
            has the project accession NZ_AZKE00000000.  This version of the
            project (01) has the accession number NZ_AZKE01000000, and consists
            of sequences AZKE01000001-AZKE01000057.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.3
            Assembly Name         :: Oeoe_IOEB_9805_1.0
            Genome Coverage       :: 17.83x
            Sequencing Technology :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000761725.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 09:52:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,926
            CDSs (total)                      :: 1,875
            Genes (coding)                    :: 1,778
            CDSs (with protein)               :: 1,778
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 97
            CDSs (without protein)            :: 97
            Pseudo Genes (ambiguous residues) :: 0 of 97
            Pseudo Genes (frameshifted)       :: 60 of 97
            Pseudo Genes (incomplete)         :: 28 of 97
            Pseudo Genes (internal stop)      :: 17 of 97
            Pseudo Genes (multiple problems)  :: 8 of 97
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843445
                     /organism="Oenococcus oeni IOEB_9805"
                     /mol_type="genomic DNA"
                     /strain="IOEB_9805"
                     /db_xref="taxon:1428420"
                     /geo_loc_name="France"
                     /collection_date="1998"
WGS         AZKE01000001-AZKE01000057
WGS_SCAFLD  NZ_AZKE01000001-NZ_AZKE01000057
//
LOCUS       NZ_JMQM01000000      3551806 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Nitratireductor basaltis strain UMTGB225, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JMQM00000000
VERSION     NZ_JMQM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02739848
            Assembly: GCF_000733725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Nitratireductor basaltis
  ORGANISM  Nitratireductor basaltis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Nitratireductor.
REFERENCE   1  (bases 1 to 3551806)
  AUTHORS   Danish-Daniel,M., Gan,H.Y., Gan,H.M., Saari,N.A. and Usup,G.
  TITLE     Genome Sequence of Nitratireductor basaltis Strain UMTGB225, a
            Marine Bacterium Isolated from a Green Barrel Tunicate in Bidong
            Island, Malaysia
  JOURNAL   Genome Announc 2 (5), e01015-14 (2014)
   PUBMED   25301654
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3551806)
  AUTHORS   Gan,H.Y., Gan,H.M., Abdullah,M.D.-D., Nur-Azna,S. and Usup,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAY-2014) School of Science, Monash University
            Malaysia, Jalan Lagoon Selatan, Bandar Sunway, Selangor 46100,
            Malaysia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JMQM00000000.1.
            The Nitratireductor basaltis whole genome shotgun (WGS) project has
            the project accession NZ_JMQM00000000.  This version of the project
            (01) has the accession number NZ_JMQM01000000, and consists of
            sequences JMQM01000001-JMQM01000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 25-APR-2014
            Assembly Method       :: SPAdes v. 2.5.1
            Genome Coverage       :: 450.0x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000733725.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:14:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,478
            CDSs (total)                      :: 3,423
            Genes (coding)                    :: 3,403
            CDSs (with protein)               :: 3,403
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 7 of 20
            Pseudo Genes (incomplete)         :: 12 of 20
            Pseudo Genes (internal stop)      :: 2 of 20
            Pseudo Genes (multiple problems)  :: 1 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3551806
                     /organism="Nitratireductor basaltis"
                     /mol_type="genomic DNA"
                     /strain="UMTGB225"
                     /host="Didemnum molle (Green Barrel Tunicate)"
                     /db_xref="taxon:472175"
                     /geo_loc_name="Malaysia: Bidong Island, Terengganu"
                     /lat_lon="5.83 N 103.05 E"
                     /collection_date="2012-10"
WGS         JMQM01000001-JMQM01000005
WGS_SCAFLD  NZ_JMQM01000001-NZ_JMQM01000005
//
LOCUS       NZ_ASSZ01000000      4749952 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paenibacillus barengoltzii G22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ASSZ00000000
VERSION     NZ_ASSZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN01730996
            Assembly: GCF_000403375.2
KEYWORDS    WGS; RefSeq.
SOURCE      Paenibacillus barengoltzii G22
  ORGANISM  Paenibacillus barengoltzii G22
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (bases 1 to 4749952)
  AUTHORS   Earl,A., Xavier,R., Elson,C., Duck,W., Walker,B., Young,S.,
            Zeng,Q., Gargeya,S., Fitzgerald,M., Haas,B., Abouelleil,A.,
            Allen,A.W., Alvarado,L., Arachchi,H.M., Berlin,A.M., Chapman,S.B.,
            Gainer-Dewar,J., Goldberg,J., Griggs,A., Gujja,S., Hansen,M.,
            Howarth,C., Imamovic,A., Ireland,A., Larimer,J., McCowan,C.,
            Murphy,C., Pearson,M., Poon,T.W., Priest,M., Roberts,A., Saif,S.,
            Shea,T., Sisk,P., Sykes,S., Wortman,J., Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genomics Platform, The Broad Institute Genome
            Sequencing Center for Infectious Disease
  TITLE     The Genome Sequence of Paenibacillus barengoltzii G22
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4749952)
  AUTHORS   Earl,A., Xavier,R., Elson,C., Duck,W., Walker,B., Young,S.,
            Zeng,Q., Gargeya,S., Fitzgerald,M., Haas,B., Abouelleil,A.,
            Allen,A.W., Alvarado,L., Arachchi,H.M., Berlin,A.M., Chapman,S.B.,
            Gainer-Dewar,J., Goldberg,J., Griggs,A., Gujja,S., Hansen,M.,
            Howarth,C., Imamovic,A., Ireland,A., Larimer,J., McCowan,C.,
            Murphy,C., Pearson,M., Poon,T.W., Priest,M., Roberts,A., Saif,S.,
            Shea,T., Sisk,P., Sykes,S., Wortman,J., Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genomics Platform, The Broad Institute Genome
            Sequencing Center for Infectious Disease
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2013) Broad Institute of MIT and Harvard, 7
            Cambridge Center, Cambridge, MA 02142, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ASSZ00000000.1.
            The Paenibacillus barengoltzii G22 whole genome shotgun (WGS)
            project has the project accession NZ_ASSZ00000000.  This version of
            the project (01) has the accession number NZ_ASSZ01000000, and
            consists of sequences ASSZ01000001-ASSZ01000040.
            Please be aware that the annotation is done automatically with
            little or no manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: allpaths v. R44024
            Assembly Name         :: Paen_bare_G22_V1
            Genome Coverage       :: 267.0x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000403375.2-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:15:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,373
            CDSs (total)                      :: 4,280
            Genes (coding)                    :: 4,236
            CDSs (with protein)               :: 4,236
            Genes (RNA)                       :: 93
            rRNAs                             :: 4, 6, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 2, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 1 (16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 17 of 44
            Pseudo Genes (incomplete)         :: 31 of 44
            Pseudo Genes (internal stop)      :: 3 of 44
            Pseudo Genes (multiple problems)  :: 6 of 44
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4749952
                     /organism="Paenibacillus barengoltzii G22"
                     /mol_type="genomic DNA"
                     /strain="G22"
                     /isolation_source="Ceca"
                     /host="Mouse"
                     /db_xref="taxon:1235795"
                     /geo_loc_name="USA: Birmingham, AL"
WGS         ASSZ01000001-ASSZ01000040
WGS_SCAFLD  NZ_KE159652-NZ_KE159656
//
LOCUS       NZ_MLLV01000000      1986909 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB240, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLLV00000000
VERSION     NZ_MLLV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297035
            Assembly: GCF_001867765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 1986909)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1986909)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLLV00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLLV00000000.  This version of the project
            (01) has the accession number NZ_MLLV01000000, and consists of
            sequences MLLV01000001-MLLV01000185.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 64.66x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001867765.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:37:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,118
            CDSs (total)                      :: 2,049
            Genes (coding)                    :: 1,949
            CDSs (with protein)               :: 1,949
            Genes (RNA)                       :: 69
            rRNAs                             :: 2, 6, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 6, 7 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 15 of 100
            Pseudo Genes (incomplete)         :: 81 of 100
            Pseudo Genes (internal stop)      :: 9 of 100
            Pseudo Genes (multiple problems)  :: 5 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1986909
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB240"
                     /isolation_source="Red wine"
                     /db_xref="taxon:1247"
                     /geo_loc_name="Australia"
                     /collection_date="1996"
WGS         MLLV01000001-MLLV01000185
WGS_SCAFLD  NZ_MLLV01000001-NZ_MLLV01000185
//
LOCUS       NZ_JBVVNO010000000   4434626 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methylomonas sp. CY1, whole genome shotgun sequencing project.
ACCESSION   NZ_JBVVNO000000000
VERSION     NZ_JBVVNO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56315315
            Assembly: GCF_056850255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Methylomonas sp. CY1
  ORGANISM  Methylomonas sp. CY1
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylomonas.
REFERENCE   1  (bases 1 to 4434626)
  AUTHORS   Yu,J. and Yu,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-MAR-2026) College of Urban and Environmental
            Sciences, Peking University, 5 Yiheyuan Road, Shaw Building No. 2,
            Beijing 100871, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVVNO000000000.1.
            The Methylomonas sp. CY1 whole genome shotgun (WGS) project has the
            project accession NZ_JBVVNO000000000.  This version of the project
            (01) has the accession number NZ_JBVVNO010000000, and consists of
            sequences JBVVNO010000001-JBVVNO010000051.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from College of Urban and
            Environmental Sciences, Peking University, Beijing, China; the
            strain is available from the corresponding author upon reasonable
            request.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 282.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056850255.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 01:46:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,088
            CDSs (total)                      :: 4,038
            Genes (coding)                    :: 4,015
            CDSs (with protein)               :: 4,015
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 23
            CDSs (without protein)            :: 23
            Pseudo Genes (ambiguous residues) :: 0 of 23
            Pseudo Genes (frameshifted)       :: 4 of 23
            Pseudo Genes (incomplete)         :: 22 of 23
            Pseudo Genes (internal stop)      :: 2 of 23
            Pseudo Genes (multiple problems)  :: 4 of 23
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4434626
                     /organism="Methylomonas sp. CY1"
                     /mol_type="genomic DNA"
                     /strain="CY1"
                     /isolation_source="intestinal contents"
                     /host="grass carp"
                     /db_xref="taxon:3695397"
                     /geo_loc_name="China: Sichuan Province"
                     /collection_date="2025-07"
WGS         JBVVNO010000001-JBVVNO010000051
WGS_SCAFLD  NZ_JBVVNO010000001-NZ_JBVVNO010000051
//
LOCUS       NZ_ARKD01000000      2329946 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Megamonas rupellensis DSM 19944, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ARKD00000000
VERSION     NZ_ARKD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02441331
            Assembly: GCF_000378365.1
KEYWORDS    WGS; GSC:MIGS:2.1; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Megamonas rupellensis DSM 19944
  ORGANISM  Megamonas rupellensis DSM 19944
            Bacteria; Bacillati; Bacillota; Negativicutes; Selenomonadales;
            Selenomonadaceae; Megamonas.
REFERENCE   1  (bases 1 to 2329946)
  AUTHORS   Kyrpides,N., Huntemann,M., Han,J., Chen,A., Mavromatis,K.,
            Markowitz,V., Palaniappan,K., Ivanova,N., Schaumberg,A., Pati,A.,
            Liolios,K., Nordberg,H.P., Cantor,M.N., Hua,S.X. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2013) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ARKD00000000.1.
            The Megamonas rupellensis DSM 19944 whole genome shotgun (WGS)
            project has the project accession NZ_ARKD00000000.  This version of
            the project (01) has the accession number NZ_ARKD01000000, and
            consists of sequences ARKD01000001-ARKD01000071.
            URL -- http://www.jgi.doe.gov
            JGI Project ID: 405799
            Source DNA and organism available from Hans-Peter Klenk at the
            German Collection of Microorganisms and Cell Cultures (DSMZ)
            (hans-peter.klenk@dsmz.de)
            Contacts: Nikos  Kyrpides (nckyrpides@lbl.gov)
                      Tanja Woyke (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI-PGF
            Annotation by JGI-PGF and JGI-ORNL
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376)
            Full annotations are available from IMG.
            
            ##MIGS-Data-START##
            investigation_type  :: bacteria_archaea
            project_name        :: Megamonas rupellensis DSM 19944
            collection_date     :: 2000
            lat_lon             :: 46.164 -1.151
            depth               :: Missing
            alt_elev            :: Missing
            country             :: France
            num_replicons       :: Missing
            ref_biomaterial     :: DSM 19944
            biotic_relationship :: Missing
            rel_to_oxygen       :: Obligate anaerobe
            isol_growth_condt   :: 19060083
            assembly            :: Velvet v. 1.1.04; ALLPATHS v. r41043
            finishing_strategy  :: Missing
            environment         :: Birds intestinal microflora
            trophic_level       :: Missing
            sequencing_meth     :: WGS
            GOLD Stamp ID       :: Gi11664
            Type Strain         :: Yes
            Funding Program     :: DOE-CSP 2012
            Isolation Site      :: Caecum of a duck
            Host Name           :: Anas platyrhynchos
            Cell Shape          :: Rod-shaped
            Motility            :: Nonmotile
            Sporulation         :: Nonsporulating
            Temperature Range   :: Mesophile
            Temperature Optimum :: 37 C
            pH                  :: 5-9
            Gram Staining       :: Gram-
            Phenotypes          :: Catalase positive
            ##MIGS-Data-END##
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: Velvet v. 1.1.04; ALLPATHS v. r41043
            Genome Coverage          :: Unknown
            Sequencing Technology    :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000378365.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 09:57:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,299
            CDSs (total)                      :: 2,237
            Genes (coding)                    :: 2,221
            CDSs (with protein)               :: 2,221
            Genes (RNA)                       :: 62
            rRNAs                             :: 5, 3 (5S, 16S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 12 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 3 of 16
            CRISPR Arrays                     :: 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2329946
                     /organism="Megamonas rupellensis DSM 19944"
                     /mol_type="genomic DNA"
                     /strain="DSM 19944"
                     /host="Anas platyrhynchos"
                     /culture_collection="DSM:19944"
                     /type_material="type strain of Megamonas rupellensis"
                     /db_xref="taxon:1122217"
                     /geo_loc_name="France"
                     /lat_lon="46.164 N 1.151 W"
                     /collection_date="2000"
WGS         ARKD01000001-ARKD01000071
WGS_SCAFLD  NZ_KB899566-NZ_KB899635
//
LOCUS       NZ_ADNV01000000      6295508 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mycobacterium parascrofulaceum ATCC BAA-614, whole genome shotgun
            sequencing project.
ACCESSION   NZ_ADNV00000000
VERSION     NZ_ADNV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00189881
            Assembly: GCF_000164135.1
KEYWORDS    WGS; HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Mycobacterium parascrofulaceum ATCC BAA-614
  ORGANISM  Mycobacterium parascrofulaceum ATCC BAA-614
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            simiae complex.
REFERENCE   1  (bases 1 to 6295508)
  AUTHORS   Muzny,D., Qin,X., Deng,J., Jiang,H., Liu,Y., Qu,J., Song,X.-Z.,
            Zhang,L., Thornton,R., Coyle,M., Francisco,L., Jackson,L.,
            Javaid,M., Korchina,V., Kovar,C., Mata,R., Mathew,T., Ngo,R.,
            Nguyen,L., Nguyen,N., Okwuonu,G., Ongeri,F., Pham,C., Simmons,D.,
            Wilczek-Boney,K., Hale,W., Jakkamsetti,A., Pham,P., Ruth,R., San
            Lucas,F., Warren,J., Zhang,J., Zhao,Z., Zhou,C., Zhu,D., Lee,S.,
            Bess,C., Blankenburg,K., Forbes,L., Fu,Q., Gubbala,S., Hirani,K.,
            Jayaseelan,J.C., Lara,F., Munidasa,M., Palculict,T., Patil,S.,
            Pu,L.-L., Saada,N., Tang,L., Weissenberger,G., Zhu,Y., Hemphill,L.,
            Shang,Y., Youmans,B., Ayvaz,T., Ross,M., Santibanez,J., Aqrawi,P.,
            Gross,S., Joshi,V., Fowler,G., Nazareth,L., Reid,J., Worley,K.,
            Petrosino,J., Highlander,S. and Gibbs,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-APR-2010) Human Genome Sequencing Center, Baylor
            College of Medicine, One Baylor Plaza, Houston, TX 77030, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADNV00000000.1.
            The Mycobacterium parascrofulaceum ATCC BAA-614 whole genome
            shotgun (WGS) project has the project accession NZ_ADNV00000000.
            This version of the project (01) has the accession number
            NZ_ADNV01000000, and consists of sequences
            ADNV01000001-ADNV01000405.
            Mycobacterium parascrofulaceum ATCC BAA-614
            
             Strain source, body site: urogenital tract, vaginal
            
             Inquiries should be directed to microbe@hgsc.bcm.tmc.edu
            
             This is a reference genome for the Human Microbiome Project. This
            project is co-owned with the Human Microbiome Project DACC.
            
             This sequence is generated as a part of the Human Microbiome
            Project (HMP), funded by the National Institutes of Health (NIH),
            National Human Genome Research Institute (NHGRI) Large-Scale
            Sequencing Research Network and the National Institute of Allergy
            and Infectious Diseases (NIAID) Microbial Genome Sequencing Centers
            Program.  The mission of the HMP is to generate resources to enable
            the characterization of the human microbiota, the microbial
            communities living within human bodies, and analyze the role of
            these organisms in human health and disease.  See
            http://www.hmpdacc.org/ for more information.
            
             The sequenced strain was obtained from ATCC.  The genomic DNA was
            prepared from a single bacterial isolate.  The sequence generated
            included at least 10 fold coverage of Roche/454 Lifesciences FLX
            fragment data and at least 8 fold clone coverage of Roche/454
            Lifesciences paired-end data.  The Roche/454 Lifesciences sequence
            was assembled using the Roche/454 Lifescience Newbler assembler.
            The contigs from the Newbler assembly were aligned with mapping
            tools such as Mosaic and Crossmatch and these data were used for
            error correction for this version of the draft assembly. This draft
            assembly meets the HMP draft quality standards (more than 90% of
            the genome is included in contigs, more than 90% of a core set of
            bacterial genes are found with > 30% identity and > 30% length;
            more than 90% of the bases in the assembly have more than 5 fold
            sequence coverage, the contig N50 length is greater than 5kb, the
            scaffold N50 length is greater than 20kb, and there is less than 1
            gap per 5kb).
            Product names were updated in June 2013.
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: High-Quality Draft
            Current Finishing Status :: High-Quality Draft
            Assembly Method          :: Newbler Assembler v. 2.0-01162009
            Genome Coverage          :: 53x
            Sequencing Technology    :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000164135.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:51:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,248
            CDSs (total)                      :: 6,196
            Genes (coding)                    :: 5,896
            CDSs (with protein)               :: 5,896
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 300
            CDSs (without protein)            :: 300
            Pseudo Genes (ambiguous residues) :: 0 of 300
            Pseudo Genes (frameshifted)       :: 106 of 300
            Pseudo Genes (incomplete)         :: 216 of 300
            Pseudo Genes (internal stop)      :: 19 of 300
            Pseudo Genes (multiple problems)  :: 38 of 300
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6295508
                     /organism="Mycobacterium parascrofulaceum ATCC BAA-614"
                     /mol_type="genomic DNA"
                     /strain="ATCC BAA-614"
                     /isolation_source="biological product [ENVO:02000043]"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:BAA-614"
                     /type_material="type strain of Mycobacterium
                     parascrofulaceum"
                     /db_xref="Greengenes:91680"
                     /db_xref="HMP:0591"
                     /db_xref="taxon:525368"
WGS         ADNV01000001-ADNV01000405
WGS_SCAFLD  NZ_GG770553-NZ_GG770676
//
LOCUS       NZ_FRBO01000000      4015904 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Myroides odoratimimus subsp. xuanwuensis strain DSM 27251, whole
            genome shotgun sequencing project.
ACCESSION   NZ_FRBO00000000
VERSION     NZ_FRBO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05444275
            Assembly: GCF_900142635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Myroides odoratimimus subsp. xuanwuensis
  ORGANISM  Myroides odoratimimus subsp. xuanwuensis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Myroides.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FRBO00000000.1.
            The Myroides odoratimimus subsp. xuanwuensis whole genome shotgun
            (WGS) project has the project accession NZ_FRBO00000000.  This
            version of the project (01) has the accession number
            NZ_FRBO01000000, and consists of sequences
            FRBO01000001-FRBO01000037.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900142635.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:49:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,603
            CDSs (total)                      :: 3,500
            Genes (coding)                    :: 3,476
            CDSs (with protein)               :: 3,476
            Genes (RNA)                       :: 103
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 92
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 7 of 24
            Pseudo Genes (incomplete)         :: 20 of 24
            Pseudo Genes (internal stop)      :: 4 of 24
            Pseudo Genes (multiple problems)  :: 6 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4015904
                     /organism="Myroides odoratimimus subsp. xuanwuensis"
                     /mol_type="genomic DNA"
                     /strain="DSM 27251"
                     /sub_species="xuanwuensis"
                     /type_material="type strain of Myroides xuanwuensis"
                     /db_xref="taxon:1324934"
WGS         FRBO01000001-FRBO01000037
WGS_SCAFLD  NZ_FRBO01000001-NZ_FRBO01000037
//
LOCUS       NZ_ARWA01000000      4235448 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methyloferula stellata AR4 strain AR4T, whole genome shotgun
            sequencing project.
ACCESSION   NZ_ARWA00000000
VERSION     NZ_ARWA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02256400
            Assembly: GCF_000385335.1
KEYWORDS    WGS; GSC:MIGS:2.1; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Methyloferula stellata AR4
  ORGANISM  Methyloferula stellata AR4
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Beijerinckiaceae; Methyloferula.
REFERENCE   1  (bases 1 to 4235448)
  AUTHORS   Dedysh,S.N., Naumoff,D.G., Vorobev,A.V., Kyrpides,N., Woyke,T.,
            Shapiro,N., Crombie,A.T., Murrell,J.C., Kalyuzhnaya,M.G.,
            Smirnova,A.V. and Dunfield,P.F.
  TITLE     Draft Genome Sequence of Methyloferula stellata AR4, an Obligate
            Methanotroph Possessing Only a Soluble Methane Monooxygenase
  JOURNAL   Genome Announc 3 (2), e01555-14 (2015)
   PUBMED   25745010
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4235448)
  AUTHORS   Kalyuzhnaya,M.G., Huntemann,M., Han,J., Chen,A., Kyrpides,N.,
            Mavromatis,K., Markowitz,V., Palaniappan,K., Ivanova,N.,
            Schaumberg,A., Pati,A., Liolios,K., Nordberg,H.P., Cantor,M.N.,
            Hua,S.X. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2013) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ARWA00000000.1.
            The Methyloferula stellata AR4 whole genome shotgun (WGS) project
            has the project accession NZ_ARWA00000000.  This version of the
            project (01) has the accession number NZ_ARWA01000000, and consists
            of sequence ARWA01000001.
            URL -- http://www.jgi.doe.gov
            JGI Project ID: 405011
            Source DNA and Organism available from Marina G Kalyuzhnaya
            (mkalyuzh@u.washington.edu)
            Source DNA available from Marina G Kalyuzhnaya
            (mkalyuzh@u.washington.edu)
            Organism available from Marina G Kalyuzhnaya
            (mkalyuzh@u.washington.edu)
            Contacts: Marina G Kalyuzhnaya (mkalyuzh@u.washington.edu)
                      Tanja Woyke (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI-PGF
            Annotation by JGI-ORNL
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376)
            Full annotations are available from IMG.
            
            ##MIGS-Data-START##
            investigation_type  :: bacteria_archaea
            project_name        :: Methyloferula stellata AR4
            collection_date     :: Missing
            lat_lon             :: Missing
            depth               :: Missing
            alt_elev            :: Missing
            country             :: Missing
            num_replicons       :: Missing
            ref_biomaterial     :: JCM 17579
            biotic_relationship :: Missing
            rel_to_oxygen       :: Missing
            isol_growth_condt   :: Missing
            assembly            :: Velvet v. 1.1.05; ALLPATHS v. r41554; Phrap
                                   v. 4.24
            finishing_strategy  :: Missing
            environment         :: Fresh water; Aquatic
            trophic_level       :: Missing
            sequencing_meth     :: WGS
            GOLD Stamp ID       :: Gi14069
            Type Strain         :: Yes
            Funding Program     :: DOE-CSP 2011
            Isolation Site      :: Lake Washington
            Gram Staining       :: Gram-
            ##MIGS-Data-END##
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: Velvet v. 1.1.05; ALLPATHS v. r41554;
                                        Phrap v. 4.24
            Genome Coverage          :: Unknown
            Sequencing Technology    :: Unknown
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000385335.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:08:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,952
            CDSs (total)                      :: 3,899
            Genes (coding)                    :: 3,873
            CDSs (with protein)               :: 3,873
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 7 of 26
            Pseudo Genes (incomplete)         :: 22 of 26
            Pseudo Genes (internal stop)      :: 2 of 26
            Pseudo Genes (multiple problems)  :: 5 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4235448
                     /organism="Methyloferula stellata AR4"
                     /mol_type="genomic DNA"
                     /strain="AR4T"
                     /isolation_source="Lake Washington"
                     /type_material="type strain of Methyloferula stellata"
                     /db_xref="taxon:876269"
WGS         ARWA01000001
WGS_SCAFLD  NZ_ARWA01000001
//
LOCUS       NZ_JYIU01000000      3558318 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Microbacterium foliorum strain DSM 12966, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JYIU00000000
VERSION     NZ_JYIU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03256325
            Assembly: GCF_000956415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Microbacterium foliorum
  ORGANISM  Microbacterium foliorum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (bases 1 to 3558318)
  AUTHORS   Corretto,E.
  TITLE     Draft genome sequences of ten Microbacterium spp. with emphasis on
            heavy metal contaminated environments
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3558318)
  AUTHORS   Corretto,E., Antonielli,L., Sessitsch,A., Kidd,P., Weyens,N. and
            Brader,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-FEB-2015) Health and Environment Department,
            Bioresources Unit, Austrian Institute of Technology,
            Konrad-Lorenz-Strasse 24, Tulln, Lower Austria 3430, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JYIU00000000.1.
            The Microbacterium foliorum whole genome shotgun (WGS) project has
            the project accession NZ_JYIU00000000.  This version of the project
            (01) has the accession number NZ_JYIU01000000, and consists of
            sequences JYIU01000001-JYIU01000046.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SPAdes v. 3.1.0
            Genome Coverage       :: 75x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000956415.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:11:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,396
            CDSs (total)                      :: 3,342
            Genes (coding)                    :: 3,323
            CDSs (with protein)               :: 3,323
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 19
            CDSs (without protein)            :: 19
            Pseudo Genes (ambiguous residues) :: 0 of 19
            Pseudo Genes (frameshifted)       :: 3 of 19
            Pseudo Genes (incomplete)         :: 17 of 19
            Pseudo Genes (internal stop)      :: 0 of 19
            Pseudo Genes (multiple problems)  :: 1 of 19
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3558318
                     /organism="Microbacterium foliorum"
                     /mol_type="genomic DNA"
                     /strain="DSM 12966"
                     /isolation_source="Phyllosphere"
                     /host="grasses"
                     /culture_collection="DSM:12966"
                     /type_material="type strain of Microbacterium foliorum"
                     /db_xref="taxon:104336"
                     /geo_loc_name="Germany"
WGS         JYIU01000001-JYIU01000046
WGS_SCAFLD  NZ_JYIU01000001-NZ_JYIU01000046
//
LOCUS       NZ_ADVE02000000      4962262 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methylosinus trichosporium OB3b, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ADVE00000000
VERSION     NZ_ADVE00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02441795
            Assembly: GCF_000178815.2
KEYWORDS    WGS; NONCONTIGUOUS_FINISHED; RefSeq.
SOURCE      Methylosinus trichosporium OB3b
  ORGANISM  Methylosinus trichosporium OB3b
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylocystaceae; Methylosinus.
REFERENCE   1  (bases 1 to 4962262)
  AUTHORS   Stein,L.Y., Yoon,S., Semrau,J.D., Dispirito,A.A., Crombie,A.,
            Murrell,J.C., Vuilleumier,S., Kalyuzhnaya,M.G., Op den Camp,H.J.,
            Bringel,F., Bruce,D., Cheng,J.F., Copeland,A., Goodwin,L., Han,S.,
            Hauser,L., Jetten,M.S., Lajus,A., Land,M.L., Lapidus,A., Lucas,S.,
            Medigue,C., Pitluck,S., Woyke,T., Zeytun,A. and Klotz,M.G.
  TITLE     Genome sequence of the obligate methanotroph Methylosinus
            trichosporium strain OB3b
  JOURNAL   J Bacteriol 192 (24), 6497-6498 (2010)
   PUBMED   20952571
REFERENCE   2  (bases 1 to 4962262)
  AUTHORS   Stein,L.Y., Huntemann,M., Han,J., Chen,A., Kyrpides,N.,
            Mavromatis,K., Markowitz,V., Palaniappan,K., Ivanova,N.,
            Schaumberg,A., Pati,A., Liolios,K., Nordberg,H.P., Cantor,M.N.,
            Hua,S.X. and Woyke,T.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (19-DEC-2013) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
REFERENCE   3  (bases 1 to 4962262)
  AUTHORS   Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Bruce,D.,
            Goodwin,L., Pitluck,S., Land,M.L., Hauser,L., Stein,L.Y. and
            Woyke,T.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Direct Submission
  JOURNAL   Submitted (14-APR-2010) US DOE Joint Genome Institute, 2800
            Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADVE00000000.2.
            
            On May 23, 2014 this sequence version replaced NZ_ADVE00000000.1.
            The Methylosinus trichosporium OB3b whole genome shotgun (WGS)
            project has the project accession NZ_ADVE00000000.  This version of
            the project (02) has the accession number NZ_ADVE02000000, and
            consists of sequences ADVE02000001-ADVE02000003.
            URL -- http://www.jgi.doe.gov
            JGI Project ID: 99920
            Source DNA and Organism available from LISA YAEL STEIN
            (lisa.stein@ualberta.ca)
            Source DNA available from LISA YAEL STEIN (lisa.stein@ualberta.ca)
            Organism available from LISA YAEL STEIN (lisa.stein@ualberta.ca)
            Contacts: LISA YAEL STEIN (lisa.stein@ualberta.ca)
                      Tanja Woyke (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI-PGF
            Annotation by JGI-ORNL
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376)
            Full annotations are available from IMG.
            
            ##MIGS-Data-START##
            collection_date          :: 01/01/1974
            environment              :: Soil
            investigation_type       :: bacteria_archaea
            project_name             :: Methylosinus trichosporium OB3b
            sequencing_meth          :: WGS
            ref_biomaterial          :: ATCC 35070
            biotic_relationship      :: Free living
            trophic_level            :: Methanotroph
            GOLD Stamp ID            :: Gi02103
            Current Finishing Status :: Level 5: Non-contiguous Finished
            Type Strain              :: Yes
            Greengenes ID            :: 44508
            Funding Program          :: DOE-CSP 2008
            Gene Calling Method      :: GenePRIMP, Prodigal 1.4
            Isolation Comments       :: isolated by R Whittenbury in 1970
            Temperature Range        :: Mesophile
            Gram Staining            :: Gram-
            Diseases                 :: None
            ##MIGS-Data-END##
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Noncontiguous Finished
            Current Finishing Status :: Noncontiguous Finished
            Assembly Method          :: Unknown program v. before 2011-06-15
            Genome Coverage          :: Unknown
            Sequencing Technology    :: 454-GS-FLX; Illumina GAII
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000178815.2-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:16:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,595
            CDSs (total)                      :: 4,538
            Genes (coding)                    :: 4,434
            CDSs (with protein)               :: 4,434
            Genes (RNA)                       :: 57
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 104
            CDSs (without protein)            :: 104
            Pseudo Genes (ambiguous residues) :: 0 of 104
            Pseudo Genes (frameshifted)       :: 44 of 104
            Pseudo Genes (incomplete)         :: 69 of 104
            Pseudo Genes (internal stop)      :: 8 of 104
            Pseudo Genes (multiple problems)  :: 17 of 104
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4962262
                     /organism="Methylosinus trichosporium OB3b"
                     /mol_type="genomic DNA"
                     /strain="OB3b"
                     /culture_collection="ATCC:35070"
                     /type_material="type strain of Methylosinus trichosporium"
                     /db_xref="taxon:595536"
WGS         ADVE02000001-ADVE02000003
WGS_SCAFLD  NZ_ADVE02000001-NZ_ADVE02000003
//
LOCUS       NZ_ABCP01000000      4413003 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Marinobacter algicola DG893, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ABCP00000000
VERSION     NZ_ABCP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02436149
            Assembly: GCF_000170835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marinobacter algicola DG893
  ORGANISM  Marinobacter algicola DG893
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 4413003)
  AUTHORS   Green,D., Ferriera,S., Johnson,J., Kravitz,S., Beeson,K.,
            Sutton,G., Rogers,Y.-H., Friedman,R., Frazier,M. and Venter,J.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUN-2007) J Craig Venter Institute, 9704 Medical
            Center Drive, Rockville, MD 20850, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ABCP00000000.1.
            The Marinobacter algicola DG893 whole genome shotgun (WGS) project
            has the project accession NZ_ABCP00000000.  This version of the
            project (01) has the accession number NZ_ABCP01000000, and consists
            of sequences ABCP01000001-ABCP01000104.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group.  Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000170835.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:14:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,106
            CDSs (total)                      :: 4,050
            Genes (coding)                    :: 4,010
            CDSs (with protein)               :: 4,010
            Genes (RNA)                       :: 56
            rRNAs                             :: 3, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 40
            CDSs (without protein)            :: 40
            Pseudo Genes (ambiguous residues) :: 0 of 40
            Pseudo Genes (frameshifted)       :: 14 of 40
            Pseudo Genes (incomplete)         :: 30 of 40
            Pseudo Genes (internal stop)      :: 4 of 40
            Pseudo Genes (multiple problems)  :: 8 of 40
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4413003
                     /organism="Marinobacter algicola DG893"
                     /mol_type="genomic DNA"
                     /strain="DG893"
                     /type_material="type strain of Marinobacter algicola"
                     /db_xref="taxon:443152"
WGS         ABCP01000001-ABCP01000104
WGS_SCAFLD  NZ_ABCP01000001-NZ_ABCP01000104
//
LOCUS       NZ_MVIF01000000      6172209 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mycobacterium persicum strain AFPC-000227, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MVIF00000000
VERSION     NZ_MVIF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06064255
            Assembly: GCF_002086675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycobacterium persicum
  ORGANISM  Mycobacterium persicum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (bases 1 to 6172209)
  AUTHORS   Tortoli,E., Trovato,A. and Cirillo,D.M.
  TITLE     The new phylogeny of genus Mycobacterium
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6172209)
  AUTHORS   Tortoli,E., Trovato,A. and Cirillo,D.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-FEB-2017) Emerging Bacterail Pathogens Unit, IRCCS
            San Raffaele Scientific Institute, via Olgettina 58, Milano, MI
            20132, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MVIF00000000.1.
            The Mycobacterium persicum whole genome shotgun (WGS) project has
            the project accession NZ_MVIF00000000.  This version of the project
            (01) has the accession number NZ_MVIF01000000, and consists of
            sequences MVIF01000001-MVIF01000387.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SPAdes v. 3.9.1
            Genome Coverage       :: 11.0x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002086675.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:13:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,846
            CDSs (total)                      :: 5,794
            Genes (coding)                    :: 5,381
            CDSs (with protein)               :: 5,381
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 413
            CDSs (without protein)            :: 413
            Pseudo Genes (ambiguous residues) :: 0 of 413
            Pseudo Genes (frameshifted)       :: 135 of 413
            Pseudo Genes (incomplete)         :: 328 of 413
            Pseudo Genes (internal stop)      :: 25 of 413
            Pseudo Genes (multiple problems)  :: 67 of 413
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6172209
                     /organism="Mycobacterium persicum"
                     /mol_type="genomic DNA"
                     /strain="AFPC-000227"
                     /culture_collection="DSM:104278"
                     /type_material="type strain of Mycobacterium persicum"
                     /db_xref="taxon:1487726"
WGS         MVIF01000001-MVIF01000387
WGS_SCAFLD  NZ_MVIF01000001-NZ_MVIF01000387
//
LOCUS       NZ_CAUM01000000      6232533 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mesorhizobium metallidurans STM 2683, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CAUM00000000
VERSION     NZ_CAUM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2272539
            Assembly: GCF_000350085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mesorhizobium metallidurans STM 2683
  ORGANISM  Mesorhizobium metallidurans STM 2683
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (bases 1 to 6232533)
  AUTHORS   Genoscope -,C.E.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-FEB-2013) Genoscope / CEA (Commissariat # l'energie
            atomique et aux energies alternatives): BP 191 91006 EVRY cedex -
            FRANCE (E-mail: seqref@genoscope.cns.fr - Web:
            www.genoscope.cns.fr)
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAUM00000000.1.
            The Mesorhizobium metallidurans STM 2683 whole genome shotgun (WGS)
            project has the project accession NZ_CAUM00000000.  This version of
            the project (01) has the accession number NZ_CAUM01000000, and
            consists of sequences CAUM01000001-CAUM01000191.
            Annotation results relative to BLAST similarities, COG
            assignations, enzymatic function prediction (PRIAM software),
            TMHMM, PsortB and SignalP predictions, and synteny conservation
            (Syntonizer software) are available in the MicroScope annotation
            platform
            http://www.genoscope.cns.fr/agc/microscope.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000350085.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:22:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,163
            CDSs (total)                      :: 6,108
            Genes (coding)                    :: 5,853
            CDSs (with protein)               :: 5,853
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 255
            CDSs (without protein)            :: 255
            Pseudo Genes (ambiguous residues) :: 0 of 255
            Pseudo Genes (frameshifted)       :: 121 of 255
            Pseudo Genes (incomplete)         :: 186 of 255
            Pseudo Genes (internal stop)      :: 17 of 255
            Pseudo Genes (multiple problems)  :: 61 of 255
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6232533
                     /organism="Mesorhizobium metallidurans STM 2683"
                     /mol_type="genomic DNA"
                     /strain="STM 2683"
                     /type_material="type strain of Mesorhizobium
                     metallidurans"
                     /db_xref="taxon:1297569"
WGS         CAUM01000001-CAUM01000191
WGS_SCAFLD  NZ_CAUM01000001-NZ_CAUM01000191
//
LOCUS       NZ_AJTV01000000      4475912 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methylocystis parvus OBBP, whole genome shotgun sequencing project.
ACCESSION   NZ_AJTV00000000
VERSION     NZ_AJTV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02469457
            Assembly: GCF_000283235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Methylocystis parvus OBBP
  ORGANISM  Methylocystis parvus OBBP
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylocystaceae; Methylocystis.
REFERENCE   1  (bases 1 to 4475912)
  AUTHORS   del Cerro,C., Garcia,J.M., Rojas,A., Tortajada,M., Ramon,D.,
            Galan,B., Prieto,M.A. and Garcia,J.L.
  TITLE     Genome sequence of the methanotrophic poly-beta-hydroxybutyrate
            producer Methylocystis parvus OBBP
  JOURNAL   J Bacteriol 194 (20), 5709-5710 (2012)
   PUBMED   23012286
REFERENCE   2  (bases 1 to 4475912)
  AUTHORS   del Cerro,C., Garcia,J.M., Torres,B., Rojas,A., Tortajada,M.,
            Ramon,D., Galan,B., Prieto,M.A. and Garcia,J.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JAN-2012) Environmental Biology, Centro de
            Investigaciones Biologicas, Ramiro de Maeztu 9, Madrid, Madrid
            28040, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AJTV00000000.1.
            The Methylocystis parvus OBBP whole genome shotgun (WGS) project
            has the project accession NZ_AJTV00000000.  This version of the
            project (01) has the accession number NZ_AJTV01000000, and consists
            of sequences AJTV01000001-AJTV01000108.
            Bacteria available from the National Collections of Industrial Food
            and Marine Bacteria (incorporating the NCFB) (NCIMB 11129).
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: JAN-2012
            Assembly Method       :: Newbler v. 2.5.3
            Assembly Name         :: MetPar_1.0
            Genome Coverage       :: 33x
            Sequencing Technology :: 454 GS-FLX Titanium
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000283235.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:30:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,408
            CDSs (total)                      :: 4,354
            Genes (coding)                    :: 4,264
            CDSs (with protein)               :: 4,264
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 90
            CDSs (without protein)            :: 90
            Pseudo Genes (ambiguous residues) :: 0 of 90
            Pseudo Genes (frameshifted)       :: 33 of 90
            Pseudo Genes (incomplete)         :: 63 of 90
            Pseudo Genes (internal stop)      :: 8 of 90
            Pseudo Genes (multiple problems)  :: 14 of 90
            CRISPR Arrays                     :: 6
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4475912
                     /organism="Methylocystis parvus OBBP"
                     /mol_type="genomic DNA"
                     /strain="OBBP"
                     /culture_collection="NCIMB:11129"
                     /type_material="type strain of Methylocystis parvus"
                     /db_xref="taxon:1134912"
WGS         AJTV01000001-AJTV01000108
WGS_SCAFLD  NZ_AJTV01000001-NZ_AJTV01000108
//
LOCUS       NZ_MVHL01000000      5897311 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mycobacterium bouchedurhonense strain DSM 45439, whole genome
            shotgun sequencing project.
ACCESSION   NZ_MVHL00000000
VERSION     NZ_MVHL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06064234
            Assembly: GCF_002086165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycobacterium bouchedurhonense
  ORGANISM  Mycobacterium bouchedurhonense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            avium complex (MAC).
REFERENCE   1  (bases 1 to 5897311)
  AUTHORS   Tortoli,E., Trovato,A. and Cirillo,D.M.
  TITLE     The new phylogeny of genus Mycobacterium
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5897311)
  AUTHORS   Tortoli,E., Trovato,A. and Cirillo,D.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2017) Emerging Bacterial Pathogens Unit, IRCCS
            San Raffaele Scientific Institute, via Olgettina 58, Milano, MI
            20132, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MVHL00000000.1.
            The Mycobacterium bouchedurhonense whole genome shotgun (WGS)
            project has the project accession NZ_MVHL00000000.  This version of
            the project (01) has the accession number NZ_MVHL01000000, and
            consists of sequences MVHL01000001-MVHL01000230.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SPAdes v. 3.9.1
            Genome Coverage       :: 18.1x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002086165.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:20:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,787
            CDSs (total)                      :: 5,704
            Genes (coding)                    :: 5,484
            CDSs (with protein)               :: 5,484
            Genes (RNA)                       :: 83
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 220
            CDSs (without protein)            :: 220
            Pseudo Genes (ambiguous residues) :: 0 of 220
            Pseudo Genes (frameshifted)       :: 75 of 220
            Pseudo Genes (incomplete)         :: 156 of 220
            Pseudo Genes (internal stop)      :: 11 of 220
            Pseudo Genes (multiple problems)  :: 22 of 220
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5897311
                     /organism="Mycobacterium bouchedurhonense"
                     /mol_type="genomic DNA"
                     /strain="DSM 45439"
                     /culture_collection="DSM:45439"
                     /type_material="type strain of Mycobacterium
                     bouchedurhonense"
                     /db_xref="taxon:701041"
WGS         MVHL01000001-MVHL01000230
WGS_SCAFLD  NZ_MVHL01000001-NZ_MVHL01000230
//
LOCUS       NZ_FMIB01000000      6683691 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micromonospora chersina strain DSM 44151, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FMIB00000000
VERSION     NZ_FMIB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04488485
            Assembly: GCF_900091475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micromonospora chersina
  ORGANISM  Micromonospora chersina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1
  AUTHORS   Varghese,Neha. and Submissions,Spin.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-JUN-2016) DOE - JOINT GENOME INSTITUTE, 2800 Mitchell
            Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FMIB00000000.1.
            The Micromonospora chersina whole genome shotgun (WGS) project has
            the project accession NZ_FMIB00000000.  This version of the project
            (01) has the accession number NZ_FMIB01000000, and consists of
            sequences FMIB01000001-FMIB01000002.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900091475.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:59:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,259
            CDSs (total)                      :: 6,188
            Genes (coding)                    :: 6,098
            CDSs (with protein)               :: 6,098
            Genes (RNA)                       :: 71
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 90
            CDSs (without protein)            :: 90
            Pseudo Genes (ambiguous residues) :: 0 of 90
            Pseudo Genes (frameshifted)       :: 30 of 90
            Pseudo Genes (incomplete)         :: 66 of 90
            Pseudo Genes (internal stop)      :: 3 of 90
            Pseudo Genes (multiple problems)  :: 7 of 90
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6683691
                     /organism="Micromonospora chersina"
                     /mol_type="genomic DNA"
                     /strain="DSM 44151"
                     /type_material="type strain of Micromonospora chersina"
                     /db_xref="taxon:47854"
WGS         FMIB01000001-FMIB01000002
WGS_SCAFLD  NZ_FMIB01000001-NZ_FMIB01000002
//
LOCUS       NZ_FNAJ01000000      9233965 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Myxococcus virescens strain DSM 2260, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNAJ00000000
VERSION     NZ_FNAJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04488504
            Assembly: GCF_900101905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Myxococcus virescens
  ORGANISM  Myxococcus virescens
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Myxococcus.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNAJ00000000.1.
            The Myxococcus virescens whole genome shotgun (WGS) project has the
            project accession NZ_FNAJ00000000.  This version of the project
            (01) has the accession number NZ_FNAJ01000000, and consists of
            sequences FNAJ01000001-FNAJ01000057.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900101905.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:14:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,614
            CDSs (total)                      :: 7,544
            Genes (coding)                    :: 7,471
            CDSs (with protein)               :: 7,471
            Genes (RNA)                       :: 70
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 73
            CDSs (without protein)            :: 73
            Pseudo Genes (ambiguous residues) :: 0 of 73
            Pseudo Genes (frameshifted)       :: 12 of 73
            Pseudo Genes (incomplete)         :: 69 of 73
            Pseudo Genes (internal stop)      :: 5 of 73
            Pseudo Genes (multiple problems)  :: 12 of 73
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9233965
                     /organism="Myxococcus virescens"
                     /mol_type="genomic DNA"
                     /strain="DSM 2260"
                     /type_material="type strain of Myxococcus virescens"
                     /db_xref="taxon:83456"
WGS         FNAJ01000001-FNAJ01000057
WGS_SCAFLD  NZ_FNAJ01000001-NZ_FNAJ01000057
//
LOCUS       NZ_AGSN01000000      7293571 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mesorhizobium amorphae CCNWGS0123, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AGSN00000000
VERSION     NZ_AGSN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02471575
            Assembly: GCF_000233995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mesorhizobium amorphae CCNWGS0123
  ORGANISM  Mesorhizobium amorphae CCNWGS0123
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (bases 1 to 7293571)
  AUTHORS   Hao,X., Lin,Y., Johnstone,L., Baltrus,D.A., Miller,S.J., Wei,G. and
            Rensing,C.
  TITLE     Draft genome sequence of plant growth-promoting rhizobium
            Mesorhizobium amorphae, isolated from zinc-lead mine tailings
  JOURNAL   J Bacteriol 194 (3), 736-737 (2012)
   PUBMED   22247533
REFERENCE   2  (bases 1 to 7293571)
  AUTHORS   Hao,X., Lin,Y., Johnstone,L., Miller,S., Wei,G. and Rensing,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-OCT-2011) Soil, Water and Environmental Science,
            University of Arizona, P.O. Box 210038, Tucson, AZ 85721, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AGSN00000000.1.
            The Mesorhizobium amorphae CCNWGS0123 whole genome shotgun (WGS)
            project has the project accession NZ_AGSN00000000.  This version of
            the project (01) has the accession number NZ_AGSN01000000, and
            consists of sequences AGSN01000001-AGSN01000274.
            Genome was manually curated based on annotation generated by the
            NCBI Prokaryotic Genomes Automatic Annotation Pipeline Group.
            Information about the Pipeline can be found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html.
            Bacteria available from College of Life Sciences, State Key
            Laboratory of Crop Stress Biology in Arid Areas, Northwest A & F
            University, Yangling, Shaanxi 712100, P. R. China and from
            Department of Soil, Water and Environmental Science, University of
            Arizona, AZ 85721 USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 21-DEC-2010
            Assembly Method       :: Newbler v. 2.3
            Genome Coverage       :: 18x
            Sequencing Technology :: 454 GS FLX Titanium
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000233995.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:58:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,095
            CDSs (total)                      :: 7,039
            Genes (coding)                    :: 6,755
            CDSs (with protein)               :: 6,755
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 284
            CDSs (without protein)            :: 284
            Pseudo Genes (ambiguous residues) :: 0 of 284
            Pseudo Genes (frameshifted)       :: 129 of 284
            Pseudo Genes (incomplete)         :: 221 of 284
            Pseudo Genes (internal stop)      :: 36 of 284
            Pseudo Genes (multiple problems)  :: 83 of 284
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7293571
                     /organism="Mesorhizobium amorphae CCNWGS0123"
                     /mol_type="genomic DNA"
                     /strain="CCNWGS0123"
                     /isolation_source="nodules of Robinia pseudoacacia in mine
                     tailing"
                     /host="Robinia pseudoacacia"
                     /db_xref="taxon:1082933"
WGS         AGSN01000001-AGSN01000274
WGS_SCAFLD  NZ_AGSN01000001-NZ_AGSN01000274
//
LOCUS       NZ_LQPH01000000      6727177 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mycobacterium nebraskense strain DSM 44803, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LQPH00000000
VERSION     NZ_LQPH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04216938
            Assembly: GCF_002102255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycobacterium nebraskense
  ORGANISM  Mycobacterium nebraskense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (bases 1 to 6727177)
  AUTHORS   Tarcisio,F., Conor,M., Antonella,G., Elisabetta,G., Giulia,F.S.,
            Sara,T., Anna,F., Clotilde,B., Roberto,B., Veronica,D.S., Fabio,R.,
            Monica,P., Olivier,J., Enrico,T. and Nicola,S.
  TITLE     The new phylogeny of the genus Mycobacterium
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6727177)
  AUTHORS   Tarcisio,F., Conor,M., Antonella,G., Elisabetta,G., Giulia,F.S.,
            Sara,T., Anna,F., Clotilde,B., Roberto,B., Veronica,D.S., Fabio,R.,
            Monica,P., Olivier,J., Enrico,T. and Nicola,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JAN-2016) Centre for Integrative Biology, University
            of Trento, via Sommarive, 9, Trento 38123, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LQPH00000000.1.
            The Mycobacterium nebraskense whole genome shotgun (WGS) project
            has the project accession NZ_LQPH00000000.  This version of the
            project (01) has the accession number NZ_LQPH01000000, and consists
            of sequences LQPH01000001-LQPH01000189.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Spades v. 3.5.0
            Genome Coverage       :: 90x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002102255.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:24:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,410
            CDSs (total)                      :: 6,356
            Genes (coding)                    :: 6,084
            CDSs (with protein)               :: 6,084
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 272
            CDSs (without protein)            :: 272
            Pseudo Genes (ambiguous residues) :: 0 of 272
            Pseudo Genes (frameshifted)       :: 114 of 272
            Pseudo Genes (incomplete)         :: 210 of 272
            Pseudo Genes (internal stop)      :: 19 of 272
            Pseudo Genes (multiple problems)  :: 64 of 272
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6727177
                     /organism="Mycobacterium nebraskense"
                     /mol_type="genomic DNA"
                     /strain="DSM 44803"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /culture_collection="DSM:44803"
                     /type_material="type strain of Mycobacterium nebraskense"
                     /db_xref="taxon:244292"
                     /geo_loc_name="USA: Omaha, Nebraska"
                     /collection_date="2002-09-14"
                     /collected_by="Nebraska Medical Center"
WGS         LQPH01000001-LQPH01000189
WGS_SCAFLD  NZ_LQPH01000001-NZ_LQPH01000189
//
LOCUS       NZ_NEFY01000000      3836576 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Marinobacter vinifirmus strain FB1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_NEFY00000000
VERSION     NZ_NEFY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06827974
            Assembly: GCF_002258215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marinobacter vinifirmus
  ORGANISM  Marinobacter vinifirmus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 3836576)
  AUTHORS   Stepanov,V.G., Roberts,D.J. and Fox,G.E.
  TITLE     Draft genome sequence of the halophilic bacterium Marinobacter
            vinifirmus FB1
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3836576)
  AUTHORS   Stepanov,V.G., Roberts,D.J. and Fox,G.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2017) Department of Biology & Biochemistry,
            University of Houston, 3369 Cullen Blvd, Houston, TX 77204, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NEFY00000000.1.
            The Marinobacter vinifirmus whole genome shotgun (WGS) project has
            the project accession NZ_NEFY00000000.  This version of the project
            (01) has the accession number NZ_NEFY01000000, and consists of
            sequences NEFY01000001-NEFY01000060.
            Bacteria and source DNA available from DSM:17747. Annotation was
            added by the NCBI Prokaryotic Genome Annotation Pipeline (released
            2013). Information about the Pipeline can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-APR-2017
            Assembly Method        :: ABySS v. 2.0.2; SPAdes v. 3.9.0; Ray v.
                                      2.3.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 61x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002258215.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:22:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,595
            CDSs (total)                      :: 3,534
            Genes (coding)                    :: 3,488
            CDSs (with protein)               :: 3,488
            Genes (RNA)                       :: 61
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 14 of 46
            Pseudo Genes (incomplete)         :: 38 of 46
            Pseudo Genes (internal stop)      :: 4 of 46
            Pseudo Genes (multiple problems)  :: 7 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3836576
                     /organism="Marinobacter vinifirmus"
                     /mol_type="genomic DNA"
                     /strain="FB1"
                     /isolation_source="wine wastewater of evaporation pond
                     after decalcification of the tanks"
                     /culture_collection="DSM:17747"
                     /type_material="type strain of Marinobacter vinifirmus"
                     /db_xref="taxon:355591"
                     /geo_loc_name="France"
                     /collection_date="2006"
                     /collected_by="Liebgott P. P. et al."
WGS         NEFY01000001-NEFY01000060
WGS_SCAFLD  NZ_NEFY01000001-NZ_NEFY01000060
//
LOCUS       NZ_QQGF01000000      2100405 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria meningitidis strain M29016, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QQGF00000000
VERSION     NZ_QQGF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09704727
            Assembly: GCF_003490915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2100405)
  AUTHORS   Topaz,N., Boxrud,D., Retchless,A.C., Nichols,M., Chang,H.Y., Hu,F.
            and Wang,X.
  TITLE     BMScan: using whole genome similarity to rapidly and accurately
            identify bacterial meningitis causing species
  JOURNAL   BMC Infect Dis 18 (1), 405 (2018)
   PUBMED   30111301
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2100405)
  AUTHORS   Topaz,N., Retchless,A.C., Chang,H.-Y., Hu,F. and Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUL-2018) Bacterial Meningitis Lab, Centers for
            Disease Control and Prevention, 1600 Clifton Rd, Atlanta, GA 30333,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QQGF00000000.1.
            The Neisseria meningitidis whole genome shotgun (WGS) project has
            the project accession NZ_QQGF00000000.  This version of the project
            (01) has the accession number NZ_QQGF01000000, and consists of
            sequences QQGF01000001-QQGF01000230.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 229.3130223531177x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003490915.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:49:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,168
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 1,947
            CDSs (with protein)               :: 1,947
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 167
            CDSs (without protein)            :: 167
            Pseudo Genes (ambiguous residues) :: 0 of 167
            Pseudo Genes (frameshifted)       :: 53 of 167
            Pseudo Genes (incomplete)         :: 121 of 167
            Pseudo Genes (internal stop)      :: 17 of 167
            Pseudo Genes (multiple problems)  :: 23 of 167
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2100405
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /strain="M29016"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collected_by="Centers for Disease Control and Prevention"
WGS         QQGF01000001-QQGF01000230
WGS_SCAFLD  NZ_QQGF01000001-NZ_QQGF01000230
//
LOCUS       NZ_PXNO01000000      4171270 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Marinobacter shengliensis strain SL013A34A2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PXNO00000000
VERSION     NZ_PXNO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08661774
            Assembly: GCF_003007715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marinobacter shengliensis
  ORGANISM  Marinobacter shengliensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 4171270)
  AUTHORS   Cheng,H., Wu,Y.-H., Xamxidin,M. and Xu,X.-W.
  TITLE     Marinobacter brunus sp. nov., a marine bacterium of
            Gamma-proteobacteria isolated from the surface seawater of the
            South China Sea
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4171270)
  AUTHORS   Cheng,H., Wu,Y.-H., Xamxidin,M. and Xu,X.-W.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAR-2018) Key Laboratory of Marine Ecosystem and
            Biogeochemistry, Second Institute of Oceanography, State Oceanic
            Administration, 36th Baochu Bei Road, Hangzhou, Zhejiang 310012,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PXNO00000000.1.
            The Marinobacter shengliensis whole genome shotgun (WGS) project
            has the project accession NZ_PXNO00000000.  This version of the
            project (01) has the accession number NZ_PXNO01000000, and consists
            of sequences PXNO01000001-PXNO01000028.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: JAN-2018
            Assembly Method        :: ABySS v. 1.9.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 267x
            Sequencing Technology  :: Illumina HiSeq X-Ten
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003007715.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:28:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,816
            CDSs (total)                      :: 3,743
            Genes (coding)                    :: 3,726
            CDSs (with protein)               :: 3,726
            Genes (RNA)                       :: 73
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 17
            CDSs (without protein)            :: 17
            Pseudo Genes (ambiguous residues) :: 0 of 17
            Pseudo Genes (frameshifted)       :: 1 of 17
            Pseudo Genes (incomplete)         :: 14 of 17
            Pseudo Genes (internal stop)      :: 2 of 17
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4171270
                     /organism="Marinobacter shengliensis"
                     /mol_type="genomic DNA"
                     /strain="SL013A34A2"
                     /isolation_source="oil and salt contaminated soil"
                     /type_material="type strain of Marinobacter shengliensis"
                     /db_xref="taxon:1389223"
                     /geo_loc_name="China: Shengli Oilfield"
                     /lat_lon="37.883 N 118.833 E"
WGS         PXNO01000001-PXNO01000028
WGS_SCAFLD  NZ_PXNO01000001-NZ_PXNO01000028
//
LOCUS       NZ_LQOX01000000      5816659 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mycobacterium gastri strain DSM 43505, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LQOX00000000
VERSION     NZ_LQOX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04216928
            Assembly: GCF_002102175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycobacterium gastri
  ORGANISM  Mycobacterium gastri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (bases 1 to 5816659)
  AUTHORS   Tarcisio,F., Conor,M., Antonella,G., Elisabetta,G., Giulia,F.S.,
            Sara,T., Anna,F., Clotilde,B., Roberto,B., Veronica,D.S., Fabio,R.,
            Monica,P., Olivier,J., Enrico,T. and Nicola,S.
  TITLE     The new phylogeny of the genus Mycobacterium
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5816659)
  AUTHORS   Tarcisio,F., Conor,M., Antonella,G., Elisabetta,G., Giulia,F.S.,
            Sara,T., Anna,F., Clotilde,B., Roberto,B., Veronica,D.S., Fabio,R.,
            Monica,P., Olivier,J., Enrico,T. and Nicola,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JAN-2016) Centre for Integrative Biology, University
            of Trento, via Sommarive, 9, Trento 38123, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LQOX00000000.1.
            The Mycobacterium gastri whole genome shotgun (WGS) project has the
            project accession NZ_LQOX00000000.  This version of the project
            (01) has the accession number NZ_LQOX01000000, and consists of
            sequences LQOX01000001-LQOX01000154.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Spades v. 3.5.0
            Genome Coverage       :: 105x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002102175.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:51:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,298
            CDSs (total)                      :: 5,246
            Genes (coding)                    :: 4,875
            CDSs (with protein)               :: 4,875
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 371
            CDSs (without protein)            :: 371
            Pseudo Genes (ambiguous residues) :: 0 of 371
            Pseudo Genes (frameshifted)       :: 144 of 371
            Pseudo Genes (incomplete)         :: 289 of 371
            Pseudo Genes (internal stop)      :: 23 of 371
            Pseudo Genes (multiple problems)  :: 76 of 371
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5816659
                     /organism="Mycobacterium gastri"
                     /mol_type="genomic DNA"
                     /strain="DSM 43505"
                     /isolation_source="gastric lavage"
                     /host="Homo sapiens"
                     /culture_collection="DSM:43505"
                     /type_material="type strain of Mycobacterium gastri"
                     /db_xref="taxon:1777"
                     /collected_by="L. G. Wayne"
WGS         LQOX01000001-LQOX01000154
WGS_SCAFLD  NZ_LQOX01000001-NZ_LQOX01000154
//
LOCUS       NZ_QRDH01000000      4462136 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Marinobacter flavimaris strain KCTC 12185, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QRDH00000000
VERSION     NZ_QRDH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09748093
            Assembly: GCF_003363485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marinobacter flavimaris
  ORGANISM  Marinobacter flavimaris
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 4462136)
  AUTHORS   Chun,J., Kim,B.-Y., Choi,S.-B. and Kwak,M.-J.
  TITLE     Genome sequence of Marinobacter flavimaris KCTC 12185
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4462136)
  AUTHORS   Chun,J., Kim,B.-Y., Choi,S.-B. and Kwak,M.-J.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-AUG-2018) Research, Chunlab, JW Tower, 2477,
            Nambusunhwan-ro, Seocho-gu, Seoul 06725, South Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QRDH00000000.1.
            The Marinobacter flavimaris whole genome shotgun (WGS) project has
            the project accession NZ_QRDH00000000.  This version of the project
            (01) has the accession number NZ_QRDH01000000, and consists of
            sequences QRDH01000001-QRDH01000041.
            Bacteria and source DNA available from Byung-Yong Kim,
            byungyong.kim@chunlab.com.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 229.78x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003363485.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:48:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,142
            CDSs (total)                      :: 4,082
            Genes (coding)                    :: 4,050
            CDSs (with protein)               :: 4,050
            Genes (RNA)                       :: 60
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 6 of 32
            Pseudo Genes (incomplete)         :: 27 of 32
            Pseudo Genes (internal stop)      :: 2 of 32
            Pseudo Genes (multiple problems)  :: 3 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4462136
                     /organism="Marinobacter flavimaris"
                     /mol_type="genomic DNA"
                     /strain="KCTC 12185"
                     /isolation_source="sea water"
                     /type_material="type strain of Marinobacter flavimaris"
                     /db_xref="taxon:262076"
WGS         QRDH01000001-QRDH01000041
WGS_SCAFLD  NZ_QRDH01000001-NZ_QRDH01000041
//
LOCUS       NZ_QPCG01000000      7513085 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mucilaginibacter endophyticus strain RS1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QPCG00000000
VERSION     NZ_QPCG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09658938
            Assembly: GCF_003351025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mucilaginibacter endophyticus
  ORGANISM  Mucilaginibacter endophyticus
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
REFERENCE   1  (bases 1 to 7513085)
  AUTHORS   Zhang,Z.D. and Chen,Z.J.
  TITLE     A draft genome of strain RS1, a new species of Mucilaginibacter
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7513085)
  AUTHORS   Zhang,Z.D. and Chen,Z.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2018) Deparment of Food Science and Engineering,
            Hubei University of Arts and Science, No. 296 Longzhong Road,
            Xiangyang, Hubei 0086-441053, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QPCG00000000.1.
            The Mucilaginibacter endophyticus whole genome shotgun (WGS)
            project has the project accession NZ_QPCG00000000.  This version of
            the project (01) has the accession number NZ_QPCG01000000, and
            consists of sequences QPCG01000001-QPCG01000030.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 1.05
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003351025.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:55:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,302
            CDSs (total)                      :: 6,240
            Genes (coding)                    :: 6,219
            CDSs (with protein)               :: 6,219
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 1 of 21
            Pseudo Genes (incomplete)         :: 17 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7513085
                     /organism="Mucilaginibacter endophyticus"
                     /mol_type="genomic DNA"
                     /strain="RS1"
                     /isolation_source="stem of Chinese silvergrass grass"
                     /type_material="type material of Mucilaginibacter
                     endophyticus"
                     /db_xref="taxon:2675003"
                     /geo_loc_name="China"
                     /collection_date="2017-10-08"
WGS         QPCG01000001-QPCG01000030
WGS_SCAFLD  NZ_QPCG01000001-NZ_QPCG01000030
//
LOCUS       NZ_JWNA01000000      2083945 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria meningitidis strain Nm310822, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JWNA00000000
VERSION     NZ_JWNA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03267131
            Assembly: GCF_003995905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2083945)
  AUTHORS   Zhu,B.
  TITLE     Subtyping of N. meningitidis based on genome sequence
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2083945)
  AUTHORS   Zhu,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2014) Department of Respiratory Infectious
            Diseases, National Institute for Communicable Disease Control and
            Prevention, Chinese Center for Disease Control and Prevention, 155,
            Changbai Road, Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWNA00000000.1.
            The Neisseria meningitidis whole genome shotgun (WGS) project has
            the project accession NZ_JWNA00000000.  This version of the project
            (01) has the accession number NZ_JWNA01000000, and consists of
            sequences JWNA01000001-JWNA01000099.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003995905.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:02:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,140
            CDSs (total)                      :: 2,081
            Genes (coding)                    :: 1,915
            CDSs (with protein)               :: 1,915
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 46 of 166
            Pseudo Genes (incomplete)         :: 125 of 166
            Pseudo Genes (internal stop)      :: 19 of 166
            Pseudo Genes (multiple problems)  :: 20 of 166
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2083945
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /strain="Nm310822"
                     /isolation_source="Cerebro-Spinal Fluid"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="China: Shanghai City"
                     /lat_lon="31.2 N 121.5 E"
                     /collection_date="2007-04-09"
                     /collected_by="Shanghai CDC"
WGS         JWNA01000001-JWNA01000099
WGS_SCAFLD  NZ_JWNA01000001-NZ_JWNA01000099
//
LOCUS       NZ_QCZD01000000      4564035 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Maribacter litoralis strain SDRB-Phe2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QCZD00000000
VERSION     NZ_QCZD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08954522
            Assembly: GCF_003075045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Maribacter litoralis
  ORGANISM  Maribacter litoralis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Maribacter.
REFERENCE   1  (bases 1 to 4564035)
  AUTHORS   Lee,D.W., Kim,B.S. and Kim,J.-J.
  TITLE     Maribacter litoralis sp. nov. an aromatic hydrocarbon-degrading
            bacterium from marine sediment
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4564035)
  AUTHORS   Lee,D.W., Kim,B.S. and Kim,J.-J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-APR-2018) Division of Environmental Science &
            Ecological Engineering, Korea University, 145 Anam-ro, Seongbuk-gu,
            Seoul 02841, Korea, Republic of
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QCZD00000000.1.
            The Maribacter litoralis whole genome shotgun (WGS) project has the
            project accession NZ_QCZD00000000.  This version of the project
            (01) has the accession number NZ_QCZD01000000, and consists of
            sequences QCZD01000001-QCZD01000035.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes genome assembler v. 3.10.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 310.7x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003075045.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:41:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,044
            CDSs (total)                      :: 3,992
            Genes (coding)                    :: 3,975
            CDSs (with protein)               :: 3,975
            Genes (RNA)                       :: 52
            rRNAs                             :: 4, 5, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (16S)
            tRNAs                             :: 38
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 17
            CDSs (without protein)            :: 17
            Pseudo Genes (ambiguous residues) :: 0 of 17
            Pseudo Genes (frameshifted)       :: 4 of 17
            Pseudo Genes (incomplete)         :: 13 of 17
            Pseudo Genes (internal stop)      :: 1 of 17
            Pseudo Genes (multiple problems)  :: 1 of 17
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4564035
                     /organism="Maribacter litoralis"
                     /mol_type="genomic DNA"
                     /strain="SDRB-Phe2"
                     /isolation_source="marine sediment"
                     /type_material="type strain of Maribacter litoralis"
                     /db_xref="taxon:2059726"
                     /geo_loc_name="South Korea: Taean beach"
                     /collection_date="2014-07-09"
WGS         QCZD01000001-QCZD01000035
WGS_SCAFLD  NZ_QCZD01000001-NZ_QCZD01000035
//
LOCUS       NZ_QJSW01000000      6259714 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paenibacillus barcinonensis strain CECT 7022, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QJSW00000000
VERSION     NZ_QJSW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09074971
            Assembly: GCF_003217495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paenibacillus barcinonensis
  ORGANISM  Paenibacillus barcinonensis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (bases 1 to 6259714)
  AUTHORS   Whitman,W.
  TITLE     Genomic Encyclopedia of Type Strains, Phase III (KMG-III): the
            genomes of soil and plant-associated and newly described type
            strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6259714)
  AUTHORS   Whitman,W., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2018) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QJSW00000000.1.
            The Paenibacillus barcinonensis whole genome shotgun (WGS) project
            has the project accession NZ_QJSW00000000.  This version of the
            project (01) has the accession number NZ_QJSW01000000, and consists
            of sequences QJSW01000001-QJSW01000071.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10.1
            Expected Final Version :: No
            Genome Coverage        :: 217.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003217495.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:04:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,784
            CDSs (total)                      :: 5,662
            Genes (coding)                    :: 5,593
            CDSs (with protein)               :: 5,593
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 13, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 23S)
            partial rRNAs                     :: 1, 13, 7 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 9 of 69
            Pseudo Genes (incomplete)         :: 66 of 69
            Pseudo Genes (internal stop)      :: 1 of 69
            Pseudo Genes (multiple problems)  :: 7 of 69
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6259714
                     /organism="Paenibacillus barcinonensis"
                     /mol_type="genomic DNA"
                     /strain="CECT 7022"
                     /type_material="type strain of Paenibacillus
                     barcinonensis"
                     /db_xref="taxon:198119"
WGS         QJSW01000001-QJSW01000071
WGS_SCAFLD  NZ_QJSW01000001-NZ_QJSW01000071
//
LOCUS       NZ_PYAC01000000      7230291 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micromonospora noduli strain MED15, whole genome shotgun sequencing
            project.
ACCESSION   NZ_PYAC00000000
VERSION     NZ_PYAC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08715671
            Assembly: GCF_003264475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micromonospora noduli
  ORGANISM  Micromonospora noduli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (bases 1 to 7230291)
  AUTHORS   Riesco,R. and Trujillo,M.E.
  TITLE     Defining the species Micromonospora saelicesensis and
            Micromonospora noduli under the framework of genomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7230291)
  AUTHORS   Riesco,R. and Trujillo,M.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-MAR-2018) Dpto. Microbiologia y Genetica, Universidad
            de Salamanca, Edificio Departamental, Lab. 214 Campus Unamuno,
            Salamanca, Salamanca 37007, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PYAC00000000.1.
            The Micromonospora noduli whole genome shotgun (WGS) project has
            the project accession NZ_PYAC00000000.  This version of the project
            (01) has the accession number NZ_PYAC01000000, and consists of
            sequences PYAC01000001-PYAC01000043.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2016
            Assembly Method        :: SPAdes v. 3.10.1
            Expected Final Version :: yes
            Genome Coverage        :: 191.18x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003264475.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:05:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,645
            CDSs (total)                      :: 6,582
            Genes (coding)                    :: 6,514
            CDSs (with protein)               :: 6,514
            Genes (RNA)                       :: 63
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 15 of 68
            Pseudo Genes (incomplete)         :: 57 of 68
            Pseudo Genes (internal stop)      :: 3 of 68
            Pseudo Genes (multiple problems)  :: 7 of 68
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7230291
                     /organism="Micromonospora noduli"
                     /mol_type="genomic DNA"
                     /strain="MED15"
                     /isolation_source="nodules"
                     /host="Medicago sp."
                     /db_xref="taxon:709876"
                     /geo_loc_name="Spain: Salamanca"
                     /collection_date="2014"
WGS         PYAC01000001-PYAC01000043
WGS_SCAFLD  NZ_PYAC01000001-NZ_PYAC01000043
//
LOCUS       NZ_UPHQ01000000      6187059 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mycobacterium innocens strain MK13 isolate MK13, whole genome
            shotgun sequencing project.
ACCESSION   NZ_UPHQ00000000
VERSION     NZ_UPHQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA4938327
            Assembly: GCF_900566055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycobacterium innocens
  ORGANISM  Mycobacterium innocens
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1
  AUTHORS   Tagini,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-SEP-2018) CHUV-UNIL, Institute of Microbiology, Rue
            du Bugnon 48, 1011 Lausanne Suisse, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            UPHQ00000000.1.
            The Mycobacterium innocens whole genome shotgun (WGS) project has
            the project accession NZ_UPHQ00000000.  This version of the project
            (01) has the accession number NZ_UPHQ01000000, and consists of
            sequences UPHQ01000001-UPHQ01000361.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900566055.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:39:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,949
            CDSs (total)                      :: 5,894
            Genes (coding)                    :: 5,334
            CDSs (with protein)               :: 5,334
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 560
            CDSs (without protein)            :: 560
            Pseudo Genes (ambiguous residues) :: 0 of 560
            Pseudo Genes (frameshifted)       :: 209 of 560
            Pseudo Genes (incomplete)         :: 424 of 560
            Pseudo Genes (internal stop)      :: 37 of 560
            Pseudo Genes (multiple problems)  :: 102 of 560
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6187059
                     /organism="Mycobacterium innocens"
                     /mol_type="genomic DNA"
                     /strain="MK13"
                     /isolate="MK13"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /type_material="type strain of Mycobacterium innocens"
                     /db_xref="taxon:2341083"
                     /geo_loc_name="Switzerland"
                     /collection_date="2009-01-15"
WGS         UPHQ01000001-UPHQ01000361
WGS_SCAFLD  NZ_UPHQ01000001-NZ_UPHQ01000361
//
LOCUS       NZ_PYBV01000000      7291543 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micromonospora arborensis strain NRRL 8041, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PYBV00000000
VERSION     NZ_PYBV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08683763
            Assembly: GCF_003205615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micromonospora arborensis
  ORGANISM  Micromonospora arborensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (bases 1 to 7291543)
  AUTHORS   Schwalen,C.J., Hudson,G.A. and Mitchell,D.A.
  TITLE     Bioinformatic expansion and discovery of thiopeptide antibiotics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7291543)
  AUTHORS   Schwalen,C.J., Hudson,G.A. and Mitchell,D.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2018) Chemistry, University of Illinois at
            Urbana-Champaign, Roger Adams Laboratory 600 S. Mathews Ave,
            Urbana, IL 61801, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PYBV00000000.1.
            The Micromonospora arborensis whole genome shotgun (WGS) project
            has the project accession NZ_PYBV00000000.  This version of the
            project (01) has the accession number NZ_PYBV01000000, and consists
            of sequences PYBV01000001-PYBV01000203.
            Bacteria and source DNA available from NRRL.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 36.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003205615.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:12:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,707
            CDSs (total)                      :: 6,643
            Genes (coding)                    :: 6,501
            CDSs (with protein)               :: 6,501
            Genes (RNA)                       :: 64
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 142
            CDSs (without protein)            :: 142
            Pseudo Genes (ambiguous residues) :: 1 of 142
            Pseudo Genes (frameshifted)       :: 12 of 142
            Pseudo Genes (incomplete)         :: 134 of 142
            Pseudo Genes (internal stop)      :: 5 of 142
            Pseudo Genes (multiple problems)  :: 9 of 142
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7291543
                     /organism="Micromonospora arborensis"
                     /mol_type="genomic DNA"
                     /strain="NRRL 8041"
                     /isolation_source="obtained from ARS culture collection"
                     /culture_collection="NRRL:8041"
                     /db_xref="taxon:2116518"
                     /geo_loc_name="USA: Michigan"
WGS         PYBV01000001-PYBV01000203
WGS_SCAFLD  NZ_PYBV01000001-NZ_PYBV01000203
//
LOCUS       NZ_QGTL01000000      7322646 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Nocardia neocaledoniensis strain DSM 44717, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QGTL00000000
VERSION     NZ_QGTL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09074699
            Assembly: GCF_003182135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Nocardia neocaledoniensis
  ORGANISM  Nocardia neocaledoniensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (bases 1 to 7322646)
  AUTHORS   Goeker,M.
  TITLE     Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing
            the most valuable type-strain genomes for metagenomic binning,
            comparative biology and taxonomic classification
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7322646)
  AUTHORS   Goeker,M., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2018) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QGTL00000000.1.
            The Nocardia neocaledoniensis whole genome shotgun (WGS) project
            has the project accession NZ_QGTL00000000.  This version of the
            project (01) has the accession number NZ_QGTL01000000, and consists
            of sequences QGTL01000001-QGTL01000029.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10.1
            Expected Final Version :: No
            Genome Coverage        :: 147.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003182135.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:47:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,843
            CDSs (total)                      :: 6,777
            Genes (coding)                    :: 6,718
            CDSs (with protein)               :: 6,718
            Genes (RNA)                       :: 66
            rRNAs                             :: 6, 5, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 6, 4 (5S, 16S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 13 of 59
            Pseudo Genes (incomplete)         :: 48 of 59
            Pseudo Genes (internal stop)      :: 0 of 59
            Pseudo Genes (multiple problems)  :: 2 of 59
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7322646
                     /organism="Nocardia neocaledoniensis"
                     /mol_type="genomic DNA"
                     /strain="DSM 44717"
                     /culture_collection="DSM:44717"
                     /type_material="type strain of Nocardia neocaledoniensis"
                     /db_xref="taxon:236511"
WGS         QGTL01000001-QGTL01000029
WGS_SCAFLD  NZ_QGTL01000001-NZ_QGTL01000029
//
LOCUS       NZ_QGSZ01000000      7748575 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micromonospora inaquosa strain LB39, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QGSZ00000000
VERSION     NZ_QGSZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09254133
            Assembly: GCF_003857055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micromonospora inaquosa
  ORGANISM  Micromonospora inaquosa
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (bases 1 to 7748575)
  AUTHORS   Carro,L., Goodfellow,M. and Klenk,H.-P.
  TITLE     Micromonospora from Atacama Desert
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7748575)
  AUTHORS   Carro,L., Goodfellow,M. and Klenk,H.-P.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2018) School of Natural and Environmental
            Sciences, Newcastle University, Devonshire Building 5th Floor,
            Newcastle-Upon-Tyne NE1 7RU, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QGSZ00000000.1.
            The Micromonospora inaquosa whole genome shotgun (WGS) project has
            the project accession NZ_QGSZ00000000.  This version of the project
            (01) has the accession number NZ_QGSZ01000000, and consists of
            sequences QGSZ01000001-QGSZ01000408.
            Bacteria and source DNA available from Lorena Carro.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. FEB-2016
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 29.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003857055.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:46:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,269
            CDSs (total)                      :: 7,208
            Genes (coding)                    :: 7,021
            CDSs (with protein)               :: 7,021
            Genes (RNA)                       :: 61
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 187
            CDSs (without protein)            :: 187
            Pseudo Genes (ambiguous residues) :: 0 of 187
            Pseudo Genes (frameshifted)       :: 26 of 187
            Pseudo Genes (incomplete)         :: 174 of 187
            Pseudo Genes (internal stop)      :: 4 of 187
            Pseudo Genes (multiple problems)  :: 16 of 187
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7748575
                     /organism="Micromonospora inaquosa"
                     /mol_type="genomic DNA"
                     /strain="LB39"
                     /isolation_source="Atacama Desert soil"
                     /type_material="type strain of Micromonospora inaquosa"
                     /db_xref="taxon:2203716"
                     /geo_loc_name="Chile: Lomas Bayas"
                     /collection_date="2014"
WGS         QGSZ01000001-QGSZ01000408
WGS_SCAFLD  NZ_QGSZ01000001-NZ_QGSZ01000408
//
LOCUS       NZ_CBBFXB010000000   3582452 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Novosphingobium sp. isolate
            PELAGICS-MAG-mu-bin018030-GOSKE-SM-21jul20., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBBFXB000000000
VERSION     NZ_CBBFXB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117451251
            Assembly: GCF_964876445.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Novosphingobium sp. (freshwater metagenome)
  ORGANISM  Novosphingobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Novosphingobium.
REFERENCE   1  (bases 1 to 3582452)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JAN-2025) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBBFXB000000000.1.
            The Novosphingobium sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBBFXB000000000.  This version of the project
            (01) has the accession number NZ_CBBFXB010000000, and consists of
            sequences CBBFXB010000001-CBBFXB010000149.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964876445.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:38:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,463
            CDSs (total)                      :: 3,419
            Genes (coding)                    :: 3,350
            CDSs (with protein)               :: 3,350
            Genes (RNA)                       :: 44
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 4 of 69
            Pseudo Genes (incomplete)         :: 64 of 69
            Pseudo Genes (internal stop)      :: 10 of 69
            Pseudo Genes (multiple problems)  :: 7 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3582452
                     /organism="Novosphingobium sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-mu-bin018030-GOSKE-SM-21jul20."
                     /isolation_source="Gossenkollesee lake"
                     /db_xref="taxon:1874826"
                     /environmental_sample
                     /geo_loc_name="Austria"
                     /collection_date="2020-07-21"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBBFXB010000001-CBBFXB010000149
WGS_SCAFLD  NZ_CBBFXB010000001-NZ_CBBFXB010000149
//
LOCUS       NZ_QGSY01000000      7149450 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micromonospora arida strain LB32, whole genome shotgun sequencing
            project.
ACCESSION   NZ_QGSY00000000
VERSION     NZ_QGSY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09254037
            Assembly: GCF_003857035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micromonospora arida
  ORGANISM  Micromonospora arida
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (bases 1 to 7149450)
  AUTHORS   Carro,L., Goodfellow,M. and Klenk,H.-P.
  TITLE     Micromonospora from Atacama Desert
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7149450)
  AUTHORS   Carro,L., Goodfellow,M. and Klenk,H.-P.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2018) School of Natural and Environmental
            Sciences, Newcastle University, Devonshire Building 5th Floor,
            Newcastle-Upon-Tyne NE1 7RU, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QGSY00000000.1.
            The Micromonospora arida whole genome shotgun (WGS) project has the
            project accession NZ_QGSY00000000.  This version of the project
            (01) has the accession number NZ_QGSY01000000, and consists of
            sequences QGSY01000001-QGSY01000345.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Lorena Carro.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. FEB-2016
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 31.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003857035.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:44:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,757
            CDSs (total)                      :: 6,697
            Genes (coding)                    :: 6,560
            CDSs (with protein)               :: 6,560
            Genes (RNA)                       :: 60
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 137
            CDSs (without protein)            :: 137
            Pseudo Genes (ambiguous residues) :: 0 of 137
            Pseudo Genes (frameshifted)       :: 12 of 137
            Pseudo Genes (incomplete)         :: 127 of 137
            Pseudo Genes (internal stop)      :: 3 of 137
            Pseudo Genes (multiple problems)  :: 5 of 137
            CRISPR Arrays                     :: 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7149450
                     /organism="Micromonospora arida"
                     /mol_type="genomic DNA"
                     /strain="LB32"
                     /isolation_source="Atacama Desert soil"
                     /type_material="type strain of Micromonospora arida"
                     /db_xref="taxon:2203715"
                     /geo_loc_name="Chile: Lomas Bayas"
                     /collection_date="2014"
WGS         QGSY01000001-QGSY01000345
WGS_SCAFLD  NZ_QGSY01000001-NZ_QGSY01000345
//
LOCUS       NZ_SHKK01000000      7139733 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micromonospora violae strain DSM 45888, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SHKK00000000
VERSION     NZ_SHKK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10865970
            Assembly: GCF_004217135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micromonospora violae
  ORGANISM  Micromonospora violae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (bases 1 to 7139733)
  AUTHORS   Klenk,H.-P.
  TITLE     Sequencing the genomes of 1000 actinobacteria strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7139733)
  AUTHORS   Klenk,H.-P., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2019) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SHKK00000000.1.
            The Micromonospora violae whole genome shotgun (WGS) project has
            the project accession NZ_SHKK00000000.  This version of the project
            (01) has the accession number NZ_SHKK01000000, and consists of
            sequence SHKK01000001.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. smrtlink/6.0.0.45580, HGAP 4
                                      (0.2.1)
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 255.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004217135.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:45:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,521
            CDSs (total)                      :: 6,447
            Genes (coding)                    :: 6,362
            CDSs (with protein)               :: 6,362
            Genes (RNA)                       :: 74
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 85
            CDSs (without protein)            :: 85
            Pseudo Genes (ambiguous residues) :: 0 of 85
            Pseudo Genes (frameshifted)       :: 30 of 85
            Pseudo Genes (incomplete)         :: 68 of 85
            Pseudo Genes (internal stop)      :: 7 of 85
            Pseudo Genes (multiple problems)  :: 16 of 85
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7139733
                     /organism="Micromonospora violae"
                     /mol_type="genomic DNA"
                     /strain="DSM 45888"
                     /culture_collection="DSM:45888"
                     /type_material="type strain of Micromonospora violae"
                     /db_xref="taxon:1278207"
WGS         SHKK01000001
WGS_SCAFLD  NZ_SHKK01000001
//
LOCUS       NZ_VMBE01000000      3795762 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Marinobacter vulgaris strain F01, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VMBE00000000
VERSION     NZ_VMBE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12325361
            Assembly: GCF_007559285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marinobacter vulgaris
  ORGANISM  Marinobacter vulgaris
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 3795762)
  AUTHORS   Zhang,Y., Zhong,X.-C., Xu,W., Lu,D.-C., Zhao,J.-X. and Du,Z.-J.
  TITLE     Marinobacter sediminis sp. nov., a moderately halophilic bacterium
            isolated from marine solar saltern
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3795762)
  AUTHORS   Zhang,Y., Zhong,X.-C., Xu,W., Lu,D.-C., Zhao,J.-X. and Du,Z.-J.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JUL-2019) Marine Colloge, Shandong University at
            Weihai, 180 Wen Hua Xi Lu, Weihai, Shandong 264200, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VMBE00000000.1.
            The Marinobacter vulgaris whole genome shotgun (WGS) project has
            the project accession NZ_VMBE00000000.  This version of the project
            (01) has the accession number NZ_VMBE01000000, and consists of
            sequences VMBE01000001-VMBE01000024.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: ABySS v. 2.0.2; GapCloser v. 1.12
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007559285.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:51:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,542
            CDSs (total)                      :: 3,487
            Genes (coding)                    :: 3,454
            CDSs (with protein)               :: 3,454
            Genes (RNA)                       :: 55
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 7 of 33
            Pseudo Genes (incomplete)         :: 28 of 33
            Pseudo Genes (internal stop)      :: 5 of 33
            Pseudo Genes (multiple problems)  :: 7 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3795762
                     /organism="Marinobacter vulgaris"
                     /mol_type="genomic DNA"
                     /strain="F01"
                     /isolation_source="marine solar saltern"
                     /type_material="type strain of Marinobacter vulgaris"
                     /db_xref="taxon:1928331"
                     /geo_loc_name="China"
                     /collection_date="2018-10-01"
WGS         VMBE01000001-VMBE01000024
WGS_SCAFLD  NZ_VMBE01000001-NZ_VMBE01000024
//
LOCUS       NZ_CBBUNR010000000   3471449 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Mycobacterium sp. isolate
            PELAGICS-MAG-m2-bin116091-PLESE-LM-06aug20., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBBUNR000000000
VERSION     NZ_CBBUNR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117452310
            Assembly: GCF_964975385.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Mycobacterium sp. (freshwater metagenome)
  ORGANISM  Mycobacterium sp.
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (bases 1 to 3471449)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JAN-2025) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBBUNR000000000.1.
            The Mycobacterium sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBBUNR000000000.  This version of the project
            (01) has the accession number NZ_CBBUNR010000000, and consists of
            sequences CBBUNR010000001-CBBUNR010000242.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964975385.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:43:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,420
            CDSs (total)                      :: 3,368
            Genes (coding)                    :: 3,234
            CDSs (with protein)               :: 3,234
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 134
            CDSs (without protein)            :: 134
            Pseudo Genes (ambiguous residues) :: 0 of 134
            Pseudo Genes (frameshifted)       :: 7 of 134
            Pseudo Genes (incomplete)         :: 128 of 134
            Pseudo Genes (internal stop)      :: 2 of 134
            Pseudo Genes (multiple problems)  :: 3 of 134
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3471449
                     /organism="Mycobacterium sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-m2-bin116091-PLESE-LM-06aug20."
                     /isolation_source="Plesne lake"
                     /db_xref="taxon:1785"
                     /environmental_sample
                     /geo_loc_name="Czechia"
                     /collection_date="2020-08-06"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBBUNR010000001-CBBUNR010000242
WGS_SCAFLD  NZ_CBBUNR010000001-NZ_CBBUNR010000242
//
LOCUS       NZ_VIRL01000000      7852810 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Microbispora bryophytorum strain DSM 46710, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VIRL00000000
VERSION     NZ_VIRL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12189191
            Assembly: GCF_006874465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Microbispora bryophytorum
  ORGANISM  Microbispora bryophytorum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Microbispora.
REFERENCE   1  (bases 1 to 7852810)
  AUTHORS   Thawai,C.
  TITLE     Microbispora bryophytorum DSM 46710
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7852810)
  AUTHORS   Thawai,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-JUL-2019) Biology, King Mongkut's Institute of
            Technology Ladkrabang, Chalongkrung, Ladkrabang, Bangkok 10520,
            Thailand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VIRL00000000.1.
            The Microbispora bryophytorum whole genome shotgun (WGS) project
            has the project accession NZ_VIRL00000000.  This version of the
            project (01) has the accession number NZ_VIRL01000000, and consists
            of sequences VIRL01000001-VIRL01000138.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 15-JAN-2019
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 118.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006874465.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:55:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,271
            CDSs (total)                      :: 7,195
            Genes (coding)                    :: 7,094
            CDSs (with protein)               :: 7,094
            Genes (RNA)                       :: 76
            rRNAs                             :: 6, 5, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 1 (16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 101
            CDSs (without protein)            :: 101
            Pseudo Genes (ambiguous residues) :: 0 of 101
            Pseudo Genes (frameshifted)       :: 17 of 101
            Pseudo Genes (incomplete)         :: 91 of 101
            Pseudo Genes (internal stop)      :: 7 of 101
            Pseudo Genes (multiple problems)  :: 12 of 101
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7852810
                     /organism="Microbispora bryophytorum"
                     /mol_type="genomic DNA"
                     /strain="DSM 46710"
                     /host="moss"
                     /culture_collection="DSM:46710"
                     /type_material="type strain of Microbispora bryophytorum"
                     /db_xref="taxon:1460882"
                     /geo_loc_name="China"
                     /collection_date="2014-03-12"
WGS         VIRL01000001-VIRL01000138
WGS_SCAFLD  NZ_VIRL01000001-NZ_VIRL01000138
//
LOCUS       NZ_SMVK01000000      2513136 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micrococcus aloeverae strain BCRC 80870, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SMVK00000000
VERSION     NZ_SMVK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11110189
            Assembly: GCF_004462915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micrococcus aloeverae
  ORGANISM  Micrococcus aloeverae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
REFERENCE   1  (bases 1 to 2513136)
  AUTHORS   Huang,C.-H.
  TITLE     Genome-based reclassification of Micrococcus aloeverae and
            Micrococcus yunnanensis as later heterotypic synonyms of
            Micrococcus luteus
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2513136)
  AUTHORS   Huang,C.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2019) Bioresource Collection and Research Center,
            Food Industry Research and Development Institute, Bioresource
            Collection and Research Center, Food Industry Research and
            Development Institute, 331 Sh, Hsinchu, Taiwan 30062, Taiwan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SMVK00000000.1.
            The Micrococcus aloeverae whole genome shotgun (WGS) project has
            the project accession NZ_SMVK00000000.  This version of the project
            (01) has the accession number NZ_SMVK01000000, and consists of
            sequences SMVK01000001-SMVK01000044.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 500.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004462915.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:44:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,351
            CDSs (total)                      :: 2,296
            Genes (coding)                    :: 2,242
            CDSs (with protein)               :: 2,242
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 20 of 54
            Pseudo Genes (incomplete)         :: 32 of 54
            Pseudo Genes (internal stop)      :: 7 of 54
            Pseudo Genes (multiple problems)  :: 5 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2513136
                     /organism="Micrococcus aloeverae"
                     /mol_type="genomic DNA"
                     /strain="BCRC 80870"
                     /isolation_source="leaf"
                     /db_xref="taxon:1391911"
                     /geo_loc_name="India"
                     /collection_date="2016-10-20"
WGS         SMVK01000001-SMVK01000044
WGS_SCAFLD  NZ_SMVK01000001-NZ_SMVK01000044
//
LOCUS       NZ_CBASJJ010000000   3842032 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Novosphingobium sp. isolate
            PELAGICS-MAG-m2-bin106307-FUSWE-LM-16jul20., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBASJJ000000000
VERSION     NZ_CBASJJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117452368
            Assembly: GCF_964785015.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Novosphingobium sp. (freshwater metagenome)
  ORGANISM  Novosphingobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Novosphingobium.
REFERENCE   1  (bases 1 to 3842032)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-DEC-2024) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBASJJ000000000.1.
            The Novosphingobium sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBASJJ000000000.  This version of the project
            (01) has the accession number NZ_CBASJJ010000000, and consists of
            sequences CBASJJ010000001-CBASJJ010000157.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964785015.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:06:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,564
            CDSs (total)                      :: 3,518
            Genes (coding)                    :: 3,488
            CDSs (with protein)               :: 3,488
            Genes (RNA)                       :: 46
            rRNAs                             :: 1 (5S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 42
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 30
            CDSs (without protein)            :: 30
            Pseudo Genes (ambiguous residues) :: 0 of 30
            Pseudo Genes (frameshifted)       :: 1 of 30
            Pseudo Genes (incomplete)         :: 29 of 30
            Pseudo Genes (internal stop)      :: 0 of 30
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3842032
                     /organism="Novosphingobium sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-m2-bin106307-FUSWE-LM-16jul20."
                     /isolation_source="Grosse Fuchskuhle SW lake"
                     /db_xref="taxon:1874826"
                     /environmental_sample
                     /geo_loc_name="Germany"
                     /collection_date="2020-07-16"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBASJJ010000001-CBASJJ010000157
WGS_SCAFLD  NZ_CBASJJ010000001-NZ_CBASJJ010000157
//
LOCUS       NZ_JADIAJ010000000   3962521 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Morganella morganii subsp. morganii strain 1606-21164, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JADIAJ000000000
VERSION     NZ_JADIAJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16534577
            Assembly: GCF_018475425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Morganella morganii subsp. morganii
  ORGANISM  Morganella morganii subsp. morganii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Morganella.
REFERENCE   1  (bases 1 to 3962521)
  AUTHORS   Zhou,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-OCT-2020) State Key Laboratory of Pathogen and
            Biosecurity, Beijing Institute of Microbiology and Epidemiology,
            No. 20, Dongdajie, Fengtai, Beijing 10071, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADIAJ000000000.1.
            The Morganella morganii subsp. morganii whole genome shotgun (WGS)
            project has the project accession NZ_JADIAJ000000000.  This version
            of the project (01) has the accession number NZ_JADIAJ010000000,
            and consists of sequences JADIAJ010000001-JADIAJ010000075.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_018475425.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:15:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,855
            CDSs (total)                      :: 3,762
            Genes (coding)                    :: 3,695
            CDSs (with protein)               :: 3,695
            Genes (RNA)                       :: 93
            rRNAs                             :: 7, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 6, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 17 of 67
            Pseudo Genes (incomplete)         :: 52 of 67
            Pseudo Genes (internal stop)      :: 11 of 67
            Pseudo Genes (multiple problems)  :: 11 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3962521
                     /organism="Morganella morganii subsp. morganii"
                     /mol_type="genomic DNA"
                     /strain="1606-21164"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /sub_species="morganii"
                     /db_xref="taxon:180434"
                     /geo_loc_name="China:Beijing"
                     /collection_date="2016"
WGS         JADIAJ010000001-JADIAJ010000075
WGS_SCAFLD  NZ_JADIAJ010000001-NZ_JADIAJ010000075
//
LOCUS       NZ_VIRM01000000      8717787 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Microbispora hainanensis strain DSM 45428, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VIRM00000000
VERSION     NZ_VIRM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12189528
            Assembly: GCF_006874475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Microbispora hainanensis
  ORGANISM  Microbispora hainanensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Microbispora.
REFERENCE   1  (bases 1 to 8717787)
  AUTHORS   Thawai,C.
  TITLE     Microbispora hainanensis DSM 45428
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8717787)
  AUTHORS   Thawai,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-JUL-2019) Biology, King Mongkut's Institute of
            Technology Ladkrabang, Chalongkrung, Ladkrabang, Bangkok 10520,
            Thailand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VIRM00000000.1.
            The Microbispora hainanensis whole genome shotgun (WGS) project has
            the project accession NZ_VIRM00000000.  This version of the project
            (01) has the accession number NZ_VIRM01000000, and consists of
            sequences VIRM01000001-VIRM01000251.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 15-JAN-2019
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 95.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006874475.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:58:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,156
            CDSs (total)                      :: 8,091
            Genes (coding)                    :: 7,952
            CDSs (with protein)               :: 7,952
            Genes (RNA)                       :: 65
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 58
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 139
            CDSs (without protein)            :: 139
            Pseudo Genes (ambiguous residues) :: 0 of 139
            Pseudo Genes (frameshifted)       :: 16 of 139
            Pseudo Genes (incomplete)         :: 130 of 139
            Pseudo Genes (internal stop)      :: 5 of 139
            Pseudo Genes (multiple problems)  :: 12 of 139
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8717787
                     /organism="Microbispora hainanensis"
                     /mol_type="genomic DNA"
                     /strain="DSM 45428"
                     /isolation_source="soil"
                     /culture_collection="DSM:45428"
                     /type_material="type strain of Microbispora hainanensis"
                     /db_xref="taxon:568844"
                     /geo_loc_name="China"
                     /collection_date="2011-02-01"
WGS         VIRM01000001-VIRM01000251
WGS_SCAFLD  NZ_VIRM01000001-NZ_VIRM01000251
//
LOCUS       NZ_JADWVE010000000   2169037 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria gonorrhoeae strain 14601, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JADWVE000000000
VERSION     NZ_JADWVE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16967569
            Assembly: GCF_022575815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2169037)
  AUTHORS   Mitchev,N.
  TITLE     Neisseria gonorrhoeae genome sequencing and assembly
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2169037)
  AUTHORS   Mitchev,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-DEC-2020) Medical Microbiology, University of
            KwaZulu-Natal, 719 Umbilo Road, Durban, KwaZulu-Natal 4001, South
            Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADWVE000000000.1.
            The Neisseria gonorrhoeae whole genome shotgun (WGS) project has
            the project accession NZ_JADWVE000000000.  This version of the
            project (01) has the accession number NZ_JADWVE010000000, and
            consists of sequences JADWVE010000001-JADWVE010000150.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022575815.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:14:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,242
            Genes (coding)                    :: 2,003
            CDSs (with protein)               :: 2,003
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 239
            CDSs (without protein)            :: 239
            Pseudo Genes (ambiguous residues) :: 0 of 239
            Pseudo Genes (frameshifted)       :: 115 of 239
            Pseudo Genes (incomplete)         :: 133 of 239
            Pseudo Genes (internal stop)      :: 36 of 239
            Pseudo Genes (multiple problems)  :: 44 of 239
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2169037
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /strain="14601"
                     /isolation_source="Urethral"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="South Africa: KwaZulu-Natal"
                     /lat_lon="29.6006 S 30.3794 E"
                     /collection_date="2013"
                     /collected_by="UKZN"
WGS         JADWVE010000001-JADWVE010000150
WGS_SCAFLD  NZ_JADWVE010000001-NZ_JADWVE010000150
//
LOCUS       NZ_CAXEDV010000000   2138808 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria gonorrhoeae strain FF05-02-108 isolate FF05_02-108, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CAXEDV000000000
VERSION     NZ_CAXEDV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA114565900
            Sequence Read Archive: ERR12188082
            Assembly: GCF_963994935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2138808)
  AUTHORS   Kelvin,L.Sarenje., Marco van,Zwetselaar., Owen,Ngalamika.,
            Happiness,Kumburu., Margaret,C.Maimbolwa., Amon,Siame.,
            Sody,M.Munsaka. and Geoffrey,Kwenda.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2024) School of Health Sciences, University of
            Zambia, Lusaka, Zambia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAXEDV000000000.1.
            The Neisseria gonorrhoeae whole genome shotgun (WGS) project has
            the project accession NZ_CAXEDV000000000.  This version of the
            project (01) has the accession number NZ_CAXEDV010000000, and
            consists of sequences CAXEDV010000001-CAXEDV010000159.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_963994935.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:44:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,265
            CDSs (total)                      :: 2,209
            Genes (coding)                    :: 1,968
            CDSs (with protein)               :: 1,968
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 241
            CDSs (without protein)            :: 241
            Pseudo Genes (ambiguous residues) :: 0 of 241
            Pseudo Genes (frameshifted)       :: 117 of 241
            Pseudo Genes (incomplete)         :: 133 of 241
            Pseudo Genes (internal stop)      :: 38 of 241
            Pseudo Genes (multiple problems)  :: 45 of 241
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2138808
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /strain="FF05-02-108"
                     /isolate="FF05_02-108"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Zambia"
                     /collection_date="2020-01-30"
                     /collected_by="Chipata Hospital"
WGS         CAXEDV010000001-CAXEDV010000159
WGS_SCAFLD  NZ_CAXEDV010000001-NZ_CAXEDV010000159
//
LOCUS       NZ_JBJZQZ010000000   4102275 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Morganella morganii strain GK07, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJZQZ000000000
VERSION     NZ_JBJZQZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45903629
            Assembly: GCF_049191085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Morganella morganii (Proteus morganii)
  ORGANISM  Morganella morganii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Morganella.
REFERENCE   1  (bases 1 to 4102275)
  AUTHORS   Zhang,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-DEC-2024) Department of Clinical Laboratory, Weifang
            People's Hospital, 151 Guangwen Street, Weifang 261041, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJZQZ000000000.1.
            The Morganella morganii whole genome shotgun (WGS) project has the
            project accession NZ_JBJZQZ000000000.  This version of the project
            (01) has the accession number NZ_JBJZQZ010000000, and consists of
            sequences JBJZQZ010000001-JBJZQZ010000059.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049191085.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:01:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,973
            CDSs (total)                      :: 3,888
            Genes (coding)                    :: 3,827
            CDSs (with protein)               :: 3,827
            Genes (RNA)                       :: 85
            rRNAs                             :: 2, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 14 of 61
            Pseudo Genes (incomplete)         :: 46 of 61
            Pseudo Genes (internal stop)      :: 13 of 61
            Pseudo Genes (multiple problems)  :: 11 of 61
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4102275
                     /organism="Morganella morganii"
                     /mol_type="genomic DNA"
                     /strain="GK07"
                     /isolation_source="secretion"
                     /host="Homo sapiens"
                     /db_xref="taxon:582"
                     /geo_loc_name="China: Shandong"
                     /lat_lon="36.62 N 119.00 E"
                     /collection_date="2021-08"
                     /collected_by="Cong Zhang"
WGS         JBJZQZ010000001-JBJZQZ010000059
WGS_SCAFLD  NZ_JBJZQZ010000001-NZ_JBJZQZ010000059
//
LOCUS       NZ_VIWZ01000000      7208813 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micromonospora taraxaci strain DSM 45885, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VIWZ00000000
VERSION     NZ_VIWZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12024906
            Assembly: GCF_007830095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micromonospora taraxaci
  ORGANISM  Micromonospora taraxaci
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (bases 1 to 7208813)
  AUTHORS   Klenk,H.-P.
  TITLE     Sequencing the genomes of 1000 actinobacteria strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7208813)
  AUTHORS   Klenk,H.-P., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JUN-2019) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VIWZ00000000.1.
            The Micromonospora taraxaci whole genome shotgun (WGS) project has
            the project accession NZ_VIWZ00000000.  This version of the project
            (01) has the accession number NZ_VIWZ01000000, and consists of
            sequences VIWZ01000001-VIWZ01000002.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. smrtlink/6.0.0.47835, HGAP 4
                                      (0.2.1)
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 362.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007830095.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:15:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,565
            CDSs (total)                      :: 6,497
            Genes (coding)                    :: 6,415
            CDSs (with protein)               :: 6,415
            Genes (RNA)                       :: 68
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 30 of 82
            Pseudo Genes (incomplete)         :: 60 of 82
            Pseudo Genes (internal stop)      :: 5 of 82
            Pseudo Genes (multiple problems)  :: 12 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7208813
                     /organism="Micromonospora taraxaci"
                     /mol_type="genomic DNA"
                     /strain="DSM 45885"
                     /culture_collection="DSM:45885"
                     /type_material="type strain of Micromonospora taraxaci"
                     /db_xref="taxon:1316803"
WGS         VIWZ01000001-VIWZ01000002
WGS_SCAFLD  NZ_VIWZ01000001-NZ_VIWZ01000002
//
LOCUS       NZ_JBJZQW010000000   4115604 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Morganella morganii strain GK04, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJZQW000000000
VERSION     NZ_JBJZQW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45903626
            Assembly: GCF_049191175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Morganella morganii (Proteus morganii)
  ORGANISM  Morganella morganii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Morganella.
REFERENCE   1  (bases 1 to 4115604)
  AUTHORS   Zhang,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-DEC-2024) Department of Clinical Laboratory, Weifang
            People's Hospital, 151 Guangwen Street, Weifang 261041, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJZQW000000000.1.
            The Morganella morganii whole genome shotgun (WGS) project has the
            project accession NZ_JBJZQW000000000.  This version of the project
            (01) has the accession number NZ_JBJZQW010000000, and consists of
            sequences JBJZQW010000001-JBJZQW010000084.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049191175.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:03:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,990
            CDSs (total)                      :: 3,907
            Genes (coding)                    :: 3,845
            CDSs (with protein)               :: 3,845
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 1, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 5 (5S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 14 of 62
            Pseudo Genes (incomplete)         :: 50 of 62
            Pseudo Genes (internal stop)      :: 7 of 62
            Pseudo Genes (multiple problems)  :: 9 of 62
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4115604
                     /organism="Morganella morganii"
                     /mol_type="genomic DNA"
                     /strain="GK04"
                     /isolation_source="puncture fluid"
                     /host="Homo sapiens"
                     /db_xref="taxon:582"
                     /geo_loc_name="China: Shandong"
                     /lat_lon="36.62 N 119.00 E"
                     /collection_date="2018-11"
                     /collected_by="Cong Zhang"
WGS         JBJZQW010000001-JBJZQW010000084
WGS_SCAFLD  NZ_JBJZQW010000001-NZ_JBJZQW010000084
//
LOCUS       NZ_JAFEPD010000000   2876430 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mammaliicoccus sciuri strain GDK8D4P, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAFEPD000000000
VERSION     NZ_JAFEPD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17386212
            Assembly: GCF_016893185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (bases 1 to 2876430)
  AUTHORS   Chen,L.
  TITLE     optrA-positive Staphylococcus spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2876430)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JAN-2021) College of Veterinary Medicine, South China
            Agricultural University, Wushan, Guangzhou, Guangdong 510642, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAFEPD000000000.1.
            The Mammaliicoccus sciuri whole genome shotgun (WGS) project has
            the project accession NZ_JAFEPD000000000.  This version of the
            project (01) has the accession number NZ_JAFEPD010000000, and
            consists of sequences JAFEPD010000001-JAFEPD010000031.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: CLC NGS Cell v. 10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1006x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_016893185.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:24:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,948
            CDSs (total)                      :: 2,885
            Genes (coding)                    :: 2,842
            CDSs (with protein)               :: 2,842
            Genes (RNA)                       :: 63
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 7 of 43
            Pseudo Genes (incomplete)         :: 34 of 43
            Pseudo Genes (internal stop)      :: 8 of 43
            Pseudo Genes (multiple problems)  :: 6 of 43
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2876430
                     /organism="Mammaliicoccus sciuri"
                     /mol_type="genomic DNA"
                     /strain="GDK8D4P"
                     /host="duck"
                     /db_xref="taxon:1296"
                     /geo_loc_name="China: Guangdong"
                     /collection_date="2018-05-31"
WGS         JAFEPD010000001-JAFEPD010000031
WGS_SCAFLD  NZ_JAFEPD010000001-NZ_JAFEPD010000031
//
LOCUS       NZ_JBNCKN010000000   6919307 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micromonospora zamorensis strain DT64, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNCKN000000000
VERSION     NZ_JBNCKN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN46229774
            Assembly: GCF_049841555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micromonospora zamorensis
  ORGANISM  Micromonospora zamorensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (bases 1 to 6919307)
  AUTHORS   Tellatin,D. and Rigali,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2025) InBioS - CIP, University of Liege, Allee du
            Six Aout, 13, Liege 4000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCKN000000000.1.
            The Micromonospora zamorensis whole genome shotgun (WGS) project
            has the project accession NZ_JBNCKN000000000.  This version of the
            project (01) has the accession number NZ_JBNCKN010000000, and
            consists of sequences JBNCKN010000001-JBNCKN010000049.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 53x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049841555.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:08:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,366
            CDSs (total)                      :: 6,281
            Genes (coding)                    :: 6,187
            CDSs (with protein)               :: 6,187
            Genes (RNA)                       :: 85
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 94
            CDSs (without protein)            :: 94
            Pseudo Genes (ambiguous residues) :: 0 of 94
            Pseudo Genes (frameshifted)       :: 20 of 94
            Pseudo Genes (incomplete)         :: 83 of 94
            Pseudo Genes (internal stop)      :: 6 of 94
            Pseudo Genes (multiple problems)  :: 14 of 94
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6919307
                     /organism="Micromonospora zamorensis"
                     /mol_type="genomic DNA"
                     /strain="DT64"
                     /isolation_source="Pollen beehive"
                     /db_xref="taxon:709883"
                     /geo_loc_name="Belgium: Comblain-au-Pont"
                     /collection_date="2021-05-14"
WGS         JBNCKN010000001-JBNCKN010000049
WGS_SCAFLD  NZ_JBNCKN010000001-NZ_JBNCKN010000049
//
LOCUS       NZ_JARWSH010000000   4755259 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mycobacterium avium subsp. paratuberculosis strain VIEV_2020, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JARWSH000000000
VERSION     NZ_JARWSH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34228878
            Assembly: GCF_038419985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycobacterium avium subsp. paratuberculosis
  ORGANISM  Mycobacterium avium subsp. paratuberculosis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            avium complex (MAC).
REFERENCE   1  (bases 1 to 4755259)
  AUTHORS   Krasnikov,N.Y., Iskandarov,M.I., Fedorov,A.I., Iskandarova,S.,
            Naimanov,A.K., Tolstenko,N.G., Vangeli,E.P., Myasoedov,Y.M.,
            Mukovnin,A. and Gulyukin,A.M.
  TITLE     First full genome of M. avium paratuberculosis in Russia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4755259)
  AUTHORS   Krasnikov,N.Y., Iskandarov,M.I., Fedorov,A.I., Iskandarova,S.,
            Naimanov,A.K., Tolstenko,N.G., Vangeli,E.P., Myasoedov,Y.M.,
            Mukovnin,A. and Gulyukin,A.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-APR-2023) Molecular Biology and Biochmistry, FSC
            VIEV, Ryazansky Prospect, Moscow 109428, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARWSH000000000.1.
            The Mycobacterium avium subsp. paratuberculosis whole genome
            shotgun (WGS) project has the project accession NZ_JARWSH000000000.
            This version of the project (01) has the accession number
            NZ_JARWSH010000000, and consists of sequences
            JARWSH010000001-JARWSH010000097.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038419985.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:12:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,542
            CDSs (total)                      :: 4,490
            Genes (coding)                    :: 4,287
            CDSs (with protein)               :: 4,287
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 203
            CDSs (without protein)            :: 203
            Pseudo Genes (ambiguous residues) :: 0 of 203
            Pseudo Genes (frameshifted)       :: 129 of 203
            Pseudo Genes (incomplete)         :: 64 of 203
            Pseudo Genes (internal stop)      :: 21 of 203
            Pseudo Genes (multiple problems)  :: 11 of 203
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4755259
                     /organism="Mycobacterium avium subsp. paratuberculosis"
                     /mol_type="genomic DNA"
                     /strain="VIEV_2020"
                     /host="Bos taurus"
                     /sub_species="paratuberculosis"
                     /db_xref="taxon:1770"
                     /geo_loc_name="Russia: Udmurt Republic"
                     /collection_date="2020"
                     /collected_by="VIEV"
WGS         JARWSH010000001-JARWSH010000097
WGS_SCAFLD  NZ_JARWSH010000001-NZ_JARWSH010000097
//
LOCUS       NZ_VDFY01000000      6898708 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micromonospora orduensis strain S2509, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VDFY00000000
VERSION     NZ_VDFY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11940237
            Assembly: GCF_006228125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micromonospora orduensis
  ORGANISM  Micromonospora orduensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (bases 1 to 6898708)
  AUTHORS   Veyisoglu,A., Carro,L., Klenk,H.-P. and Sahin,N.
  TITLE     Micromonospora ordensis sp. nov., isolated from deep marine
            sediment
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6898708)
  AUTHORS   Veyisoglu,A., Carro,L., Klenk,H.-P. and Sahin,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-JUN-2019) School of Natural and Environmental
            Sciences, Newcastle University, Devonshire building 5th floor,
            Newcastle-upon-Tyne NE1 7RU, United Kingdom (Great Britain)
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VDFY00000000.1.
            The Micromonospora orduensis whole genome shotgun (WGS) project has
            the project accession NZ_VDFY00000000.  This version of the project
            (01) has the accession number NZ_VDFY01000000, and consists of
            sequences VDFY01000001-VDFY01000321.
            Bacteria and source DNA available from DSM 45926, KCTC 29201.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2016
            Assembly Method        :: SPAdes v. 2016
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 34.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006228125.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:17:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,585
            CDSs (total)                      :: 6,525
            Genes (coding)                    :: 6,317
            CDSs (with protein)               :: 6,317
            Genes (RNA)                       :: 60
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 208
            CDSs (without protein)            :: 208
            Pseudo Genes (ambiguous residues) :: 0 of 208
            Pseudo Genes (frameshifted)       :: 42 of 208
            Pseudo Genes (incomplete)         :: 179 of 208
            Pseudo Genes (internal stop)      :: 7 of 208
            Pseudo Genes (multiple problems)  :: 19 of 208
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6898708
                     /organism="Micromonospora orduensis"
                     /mol_type="genomic DNA"
                     /strain="S2509"
                     /isolation_source="marine sediment, black sea"
                     /culture_collection="DSM:45926"
                     /culture_collection="KCTC:29201"
                     /type_material="type strain of Micromonospora orduensis"
                     /db_xref="taxon:1420891"
                     /geo_loc_name="Turkey: offshore of the Melet river"
                     /collection_date="2015"
WGS         VDFY01000001-VDFY01000321
WGS_SCAFLD  NZ_VDFY01000001-NZ_VDFY01000321
//
LOCUS       NZ_JBNCNT010000000   7369129 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micromonospora zamorensis strain DT189, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNCNT000000000
VERSION     NZ_JBNCNT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47951517
            Assembly: GCF_049847125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micromonospora zamorensis
  ORGANISM  Micromonospora zamorensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (bases 1 to 7369129)
  AUTHORS   Tellatin,D. and Rigali,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2025) InBioS - CIP, University of Liege, Allee du
            Six Aout, 13, Liege 4000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCNT000000000.1.
            The Micromonospora zamorensis whole genome shotgun (WGS) project
            has the project accession NZ_JBNCNT000000000.  This version of the
            project (01) has the accession number NZ_JBNCNT010000000, and
            consists of sequences JBNCNT010000001-JBNCNT010000051.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 53x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049847125.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:41:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,755
            CDSs (total)                      :: 6,662
            Genes (coding)                    :: 6,566
            CDSs (with protein)               :: 6,566
            Genes (RNA)                       :: 93
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 96
            CDSs (without protein)            :: 96
            Pseudo Genes (ambiguous residues) :: 0 of 96
            Pseudo Genes (frameshifted)       :: 26 of 96
            Pseudo Genes (incomplete)         :: 82 of 96
            Pseudo Genes (internal stop)      :: 6 of 96
            Pseudo Genes (multiple problems)  :: 17 of 96
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7369129
                     /organism="Micromonospora zamorensis"
                     /mol_type="genomic DNA"
                     /strain="DT189"
                     /isolation_source="Propolis Beehive"
                     /db_xref="taxon:709883"
                     /geo_loc_name="Belgium: Comblain-au-Pont"
                     /collection_date="2021-05-14"
WGS         JBNCNT010000001-JBNCNT010000051
WGS_SCAFLD  NZ_JBNCNT010000001-NZ_JBNCNT010000051
//
LOCUS       NZ_JAGFVM010000000   2618466 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Marinilactibacillus kalidii strain M4U5P12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAGFVM000000000
VERSION     NZ_JAGFVM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN18384568
            Assembly: GCF_017599325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marinilactibacillus kalidii
  ORGANISM  Marinilactibacillus kalidii
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Marinilactibacillus.
REFERENCE   1  (bases 1 to 2618466)
  AUTHORS   Sun,J.-Q., Xu,L. and Huang,X.-X.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAR-2021) School of Ecology and Environment, Inner
            Mongolia University, No. 235 Daxuexijie St., Hohhot, Inner Mongolia
            010021, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGFVM000000000.1.
            The Marinilactibacillus kalidii whole genome shotgun (WGS) project
            has the project accession NZ_JAGFVM000000000.  This version of the
            project (01) has the accession number NZ_JAGFVM010000000, and
            consists of sequences JAGFVM010000001-JAGFVM010000055.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. JAN-2020
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 500.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017599325.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:02:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,542
            CDSs (total)                      :: 2,460
            Genes (coding)                    :: 2,439
            CDSs (with protein)               :: 2,439
            Genes (RNA)                       :: 82
            rRNAs                             :: 6, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 2 (5S, 16S)
            partial rRNAs                     :: 1, 5 (5S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 11 of 21
            Pseudo Genes (internal stop)      :: 7 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2618466
                     /organism="Marinilactibacillus kalidii"
                     /mol_type="genomic DNA"
                     /strain="M4U5P12"
                     /type_material="type strain of Marinilactibacillus
                     kalidii"
                     /db_xref="taxon:2820274"
                     /geo_loc_name="China"
                     /collection_date="2018-09"
WGS         JAGFVM010000001-JAGFVM010000055
WGS_SCAFLD  NZ_JAGFVM010000001-NZ_JAGFVM010000055
//
LOCUS       NZ_JBNCLU010000000   7871088 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Nocardia salmonicida strain DT191, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBNCLU000000000
VERSION     NZ_JBNCLU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN46229735
            Assembly: GCF_049844835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Nocardia salmonicida
  ORGANISM  Nocardia salmonicida
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (bases 1 to 7871088)
  AUTHORS   Tellatin,D. and Rigali,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2025) InBioS - CIP, University of Liege, Allee du
            Six Aout, 13, Liege 4000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCLU000000000.1.
            The Nocardia salmonicida whole genome shotgun (WGS) project has the
            project accession NZ_JBNCLU000000000.  This version of the project
            (01) has the accession number NZ_JBNCLU010000000, and consists of
            sequences JBNCLU010000001-JBNCLU010000053.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 52x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049844835.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:48:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,362
            CDSs (total)                      :: 7,298
            Genes (coding)                    :: 7,198
            CDSs (with protein)               :: 7,198
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 4 (16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 23 of 100
            Pseudo Genes (incomplete)         :: 90 of 100
            Pseudo Genes (internal stop)      :: 2 of 100
            Pseudo Genes (multiple problems)  :: 13 of 100
            CRISPR Arrays                     :: 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7871088
                     /organism="Nocardia salmonicida"
                     /mol_type="genomic DNA"
                     /strain="DT191"
                     /isolation_source="Propolis beehive"
                     /db_xref="taxon:53431"
                     /geo_loc_name="Belgium: Comblain-au-Pont"
                     /collection_date="2021-05-14"
WGS         JBNCLU010000001-JBNCLU010000053
WGS_SCAFLD  NZ_JBNCLU010000001-NZ_JBNCLU010000053
//
LOCUS       NZ_JBNCKK010000000   7279243 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micromonospora trifolii strain DT57, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNCKK000000000
VERSION     NZ_JBNCKK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN46229777
            Assembly: GCF_049841495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micromonospora trifolii
  ORGANISM  Micromonospora trifolii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (bases 1 to 7279243)
  AUTHORS   Tellatin,D. and Rigali,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2025) InBioS - CIP, University of Liege, Allee du
            Six Aout, 13, Liege 4000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCKK000000000.1.
            The Micromonospora trifolii whole genome shotgun (WGS) project has
            the project accession NZ_JBNCKK000000000.  This version of the
            project (01) has the accession number NZ_JBNCKK010000000, and
            consists of sequences JBNCKK010000001-JBNCKK010000020.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 53x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049841495.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:05:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,779
            CDSs (total)                      :: 6,687
            Genes (coding)                    :: 6,627
            CDSs (with protein)               :: 6,627
            Genes (RNA)                       :: 92
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 10 of 60
            Pseudo Genes (incomplete)         :: 51 of 60
            Pseudo Genes (internal stop)      :: 2 of 60
            Pseudo Genes (multiple problems)  :: 3 of 60
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7279243
                     /organism="Micromonospora trifolii"
                     /mol_type="genomic DNA"
                     /strain="DT57"
                     /isolation_source="Pollen beehive"
                     /db_xref="taxon:2911208"
                     /geo_loc_name="Belgium: Comblain-au-Pont"
                     /collection_date="2021-05-14"
WGS         JBNCKK010000001-JBNCKK010000020
WGS_SCAFLD  NZ_JBNCKK010000001-NZ_JBNCKK010000020
//
LOCUS       NZ_JBNCKY010000000   7189161 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micromonospora echinospora strain DT3, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNCKY000000000
VERSION     NZ_JBNCKY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN46229763
            Assembly: GCF_049841755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micromonospora echinospora
  ORGANISM  Micromonospora echinospora
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (bases 1 to 7189161)
  AUTHORS   Tellatin,D. and Rigali,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2025) InBioS - CIP, University of Liege, Allee du
            Six Aout, 13, Liege 4000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCKY000000000.1.
            The Micromonospora echinospora whole genome shotgun (WGS) project
            has the project accession NZ_JBNCKY000000000.  This version of the
            project (01) has the accession number NZ_JBNCKY010000000, and
            consists of sequences JBNCKY010000001-JBNCKY010000084.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 55x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049841755.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:10:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,547
            CDSs (total)                      :: 6,469
            Genes (coding)                    :: 6,382
            CDSs (with protein)               :: 6,382
            Genes (RNA)                       :: 78
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 70
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 87
            CDSs (without protein)            :: 87
            Pseudo Genes (ambiguous residues) :: 0 of 87
            Pseudo Genes (frameshifted)       :: 25 of 87
            Pseudo Genes (incomplete)         :: 72 of 87
            Pseudo Genes (internal stop)      :: 3 of 87
            Pseudo Genes (multiple problems)  :: 13 of 87
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7189161
                     /organism="Micromonospora echinospora"
                     /mol_type="genomic DNA"
                     /strain="DT3"
                     /isolation_source="Bee beehive"
                     /db_xref="taxon:1877"
                     /geo_loc_name="Belgium: Comblain-au-Pont"
                     /collection_date="2021-05-14"
WGS         JBNCKY010000001-JBNCKY010000084
WGS_SCAFLD  NZ_JBNCKY010000001-NZ_JBNCKY010000084
//
LOCUS       NZ_JBNCKL010000000   7309274 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micromonospora vinacea strain DT65, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBNCKL000000000
VERSION     NZ_JBNCKL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN46229776
            Assembly: GCF_049841515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micromonospora vinacea
  ORGANISM  Micromonospora vinacea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (bases 1 to 7309274)
  AUTHORS   Tellatin,D. and Rigali,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2025) InBioS - CIP, University of Liege, Allee du
            Six Aout, 13, Liege 4000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCKL000000000.1.
            The Micromonospora vinacea whole genome shotgun (WGS) project has
            the project accession NZ_JBNCKL000000000.  This version of the
            project (01) has the accession number NZ_JBNCKL010000000, and
            consists of sequences JBNCKL010000001-JBNCKL010000042.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 59x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049841515.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:11:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,851
            CDSs (total)                      :: 6,793
            Genes (coding)                    :: 6,707
            CDSs (with protein)               :: 6,707
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 86
            CDSs (without protein)            :: 86
            Pseudo Genes (ambiguous residues) :: 0 of 86
            Pseudo Genes (frameshifted)       :: 20 of 86
            Pseudo Genes (incomplete)         :: 75 of 86
            Pseudo Genes (internal stop)      :: 3 of 86
            Pseudo Genes (multiple problems)  :: 11 of 86
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7309274
                     /organism="Micromonospora vinacea"
                     /mol_type="genomic DNA"
                     /strain="DT65"
                     /isolation_source="Pollen beehive"
                     /db_xref="taxon:709878"
                     /geo_loc_name="Belgium: Comblain-au-Pont"
                     /collection_date="2021-05-14"
WGS         JBNCKL010000001-JBNCKL010000042
WGS_SCAFLD  NZ_JBNCKL010000001-NZ_JBNCKL010000042
//
LOCUS       NZ_JBNCMB010000000   2335857 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micrococcus porci strain DT36, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBNCMB000000000
VERSION     NZ_JBNCMB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN46229728
            Assembly: GCF_049844975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micrococcus porci
  ORGANISM  Micrococcus porci
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
REFERENCE   1  (bases 1 to 2335857)
  AUTHORS   Tellatin,D. and Rigali,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2025) InBioS - CIP, University of Liege, Allee du
            Six Aout, 13, Liege 4000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCMB000000000.1.
            The Micrococcus porci whole genome shotgun (WGS) project has the
            project accession NZ_JBNCMB000000000.  This version of the project
            (01) has the accession number NZ_JBNCMB010000000, and consists of
            sequences JBNCMB010000001-JBNCMB010000099.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 62x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049844975.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:13:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,247
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 2,126
            CDSs (with protein)               :: 2,126
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 19 of 66
            Pseudo Genes (incomplete)         :: 57 of 66
            Pseudo Genes (internal stop)      :: 1 of 66
            Pseudo Genes (multiple problems)  :: 10 of 66
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2335857
                     /organism="Micrococcus porci"
                     /mol_type="genomic DNA"
                     /strain="DT36"
                     /isolation_source="Bee beehive"
                     /db_xref="taxon:2856555"
                     /geo_loc_name="Belgium: Comblain-au-Pont"
                     /collection_date="2021-05-14"
WGS         JBNCMB010000001-JBNCMB010000099
WGS_SCAFLD  NZ_JBNCMB010000001-NZ_JBNCMB010000099
//
LOCUS       NZ_JBNCKI010000000   7012198 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micromonospora arida strain DT42, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBNCKI000000000
VERSION     NZ_JBNCKI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN46229779
            Assembly: GCF_049841435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micromonospora arida
  ORGANISM  Micromonospora arida
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (bases 1 to 7012198)
  AUTHORS   Tellatin,D. and Rigali,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2025) InBioS - CIP, University of Liege, Allee du
            Six Aout, 13, Liege 4000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCKI000000000.1.
            The Micromonospora arida whole genome shotgun (WGS) project has the
            project accession NZ_JBNCKI000000000.  This version of the project
            (01) has the accession number NZ_JBNCKI010000000, and consists of
            sequences JBNCKI010000001-JBNCKI010000053.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 54x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049841435.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:18:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,496
            CDSs (total)                      :: 6,430
            Genes (coding)                    :: 6,345
            CDSs (with protein)               :: 6,345
            Genes (RNA)                       :: 66
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 85
            CDSs (without protein)            :: 85
            Pseudo Genes (ambiguous residues) :: 0 of 85
            Pseudo Genes (frameshifted)       :: 14 of 85
            Pseudo Genes (incomplete)         :: 77 of 85
            Pseudo Genes (internal stop)      :: 6 of 85
            Pseudo Genes (multiple problems)  :: 10 of 85
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7012198
                     /organism="Micromonospora arida"
                     /mol_type="genomic DNA"
                     /strain="DT42"
                     /isolation_source="Pollen beehive"
                     /db_xref="taxon:2203715"
                     /geo_loc_name="Belgium: Comblain-au-Pont"
                     /collection_date="2021-05-14"
WGS         JBNCKI010000001-JBNCKI010000053
WGS_SCAFLD  NZ_JBNCKI010000001-NZ_JBNCKI010000053
//
LOCUS       NZ_JBNCKX010000000   7054000 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micromonospora chalcea strain DT26, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBNCKX000000000
VERSION     NZ_JBNCKX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN46229764
            Assembly: GCF_049841775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micromonospora chalcea
  ORGANISM  Micromonospora chalcea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (bases 1 to 7054000)
  AUTHORS   Tellatin,D. and Rigali,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2025) InBioS - CIP, University of Liege, Allee du
            Six Aout, 13, Liege 4000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCKX000000000.1.
            The Micromonospora chalcea whole genome shotgun (WGS) project has
            the project accession NZ_JBNCKX000000000.  This version of the
            project (01) has the accession number NZ_JBNCKX010000000, and
            consists of sequences JBNCKX010000001-JBNCKX010000062.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 54x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049841775.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:20:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,397
            CDSs (total)                      :: 6,337
            Genes (coding)                    :: 6,263
            CDSs (with protein)               :: 6,263
            Genes (RNA)                       :: 60
            rRNAs                             :: 3, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2, 2 (5S, 16S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 17 of 74
            Pseudo Genes (incomplete)         :: 62 of 74
            Pseudo Genes (internal stop)      :: 2 of 74
            Pseudo Genes (multiple problems)  :: 6 of 74
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7054000
                     /organism="Micromonospora chalcea"
                     /mol_type="genomic DNA"
                     /strain="DT26"
                     /isolation_source="Pollen beehive"
                     /db_xref="taxon:1874"
                     /geo_loc_name="Belgium: Comblain-au-Pont"
                     /collection_date="2021-05-14"
WGS         JBNCKX010000001-JBNCKX010000062
WGS_SCAFLD  NZ_JBNCKX010000001-NZ_JBNCKX010000062
//
LOCUS       NZ_JBNCKH010000000   7405995 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micromonospora saelicesensis strain DT132, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNCKH000000000
VERSION     NZ_JBNCKH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN46229780
            Assembly: GCF_049841445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micromonospora saelicesensis
  ORGANISM  Micromonospora saelicesensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (bases 1 to 7405995)
  AUTHORS   Tellatin,D. and Rigali,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2025) InBioS - CIP, University of Liege, Allee du
            Six Aout, 13, Liege 4000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCKH000000000.1.
            The Micromonospora saelicesensis whole genome shotgun (WGS) project
            has the project accession NZ_JBNCKH000000000.  This version of the
            project (01) has the accession number NZ_JBNCKH010000000, and
            consists of sequences JBNCKH010000001-JBNCKH010000034.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 54x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049841445.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:21:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,903
            CDSs (total)                      :: 6,827
            Genes (coding)                    :: 6,732
            CDSs (with protein)               :: 6,732
            Genes (RNA)                       :: 76
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 68
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 95
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 31 of 95
            Pseudo Genes (incomplete)         :: 75 of 95
            Pseudo Genes (internal stop)      :: 1 of 95
            Pseudo Genes (multiple problems)  :: 12 of 95
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7405995
                     /organism="Micromonospora saelicesensis"
                     /mol_type="genomic DNA"
                     /strain="DT132"
                     /isolation_source="Propolis beehive"
                     /db_xref="taxon:285676"
                     /geo_loc_name="Belgium: Comblain-au-Pont"
                     /collection_date="2021-05-14"
WGS         JBNCKH010000001-JBNCKH010000034
WGS_SCAFLD  NZ_JBNCKH010000001-NZ_JBNCKH010000034
//
LOCUS       NZ_JBNCOC010000000   7400839 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micromonospora arida strain DT56, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBNCOC000000000
VERSION     NZ_JBNCOC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47951508
            Assembly: GCF_049847305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micromonospora arida
  ORGANISM  Micromonospora arida
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (bases 1 to 7400839)
  AUTHORS   Tellatin,D. and Rigali,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2025) InBioS - CIP, University of Liege, Allee du
            Six Aout, 13, Liege 4000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCOC000000000.1.
            The Micromonospora arida whole genome shotgun (WGS) project has the
            project accession NZ_JBNCOC000000000.  This version of the project
            (01) has the accession number NZ_JBNCOC010000000, and consists of
            sequences JBNCOC010000001-JBNCOC010000036.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 52x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049847305.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:30:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,879
            CDSs (total)                      :: 6,814
            Genes (coding)                    :: 6,719
            CDSs (with protein)               :: 6,719
            Genes (RNA)                       :: 65
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 58
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 95
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 19 of 95
            Pseudo Genes (incomplete)         :: 84 of 95
            Pseudo Genes (internal stop)      :: 6 of 95
            Pseudo Genes (multiple problems)  :: 12 of 95
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7400839
                     /organism="Micromonospora arida"
                     /mol_type="genomic DNA"
                     /strain="DT56"
                     /isolation_source="Pollen Beehive"
                     /db_xref="taxon:2203715"
                     /geo_loc_name="Belgium: Comblain-au-Pont"
                     /collection_date="2021-05-14"
WGS         JBNCOC010000001-JBNCOC010000036
WGS_SCAFLD  NZ_JBNCOC010000001-NZ_JBNCOC010000036
//
LOCUS       NZ_JBNCOA010000000   7066024 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micromonospora chalcea strain DT66, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBNCOA000000000
VERSION     NZ_JBNCOA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47951510
            Assembly: GCF_049847265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micromonospora chalcea
  ORGANISM  Micromonospora chalcea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (bases 1 to 7066024)
  AUTHORS   Tellatin,D. and Rigali,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2025) InBioS - CIP, University of Liege, Allee du
            Six Aout, 13, Liege 4000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCOA000000000.1.
            The Micromonospora chalcea whole genome shotgun (WGS) project has
            the project accession NZ_JBNCOA000000000.  This version of the
            project (01) has the accession number NZ_JBNCOA010000000, and
            consists of sequences JBNCOA010000001-JBNCOA010000047.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 54x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049847265.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:45:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,404
            CDSs (total)                      :: 6,346
            Genes (coding)                    :: 6,262
            CDSs (with protein)               :: 6,262
            Genes (RNA)                       :: 58
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 50
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 84
            CDSs (without protein)            :: 84
            Pseudo Genes (ambiguous residues) :: 0 of 84
            Pseudo Genes (frameshifted)       :: 25 of 84
            Pseudo Genes (incomplete)         :: 66 of 84
            Pseudo Genes (internal stop)      :: 7 of 84
            Pseudo Genes (multiple problems)  :: 13 of 84
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7066024
                     /organism="Micromonospora chalcea"
                     /mol_type="genomic DNA"
                     /strain="DT66"
                     /isolation_source="Pollen Beehive"
                     /db_xref="taxon:1874"
                     /geo_loc_name="Belgium: Comblain-au-Pont"
                     /collection_date="2021-05-14"
WGS         JBNCOA010000001-JBNCOA010000047
WGS_SCAFLD  NZ_JBNCOA010000001-NZ_JBNCOA010000047
//
LOCUS       NZ_JRKO01000000      5500748 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paracoccus versutus strain DSM 582, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JRKO00000000
VERSION     NZ_JRKO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02927209
            Assembly: GCF_000763885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paracoccus versutus
  ORGANISM  Paracoccus versutus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paracoccus.
REFERENCE   1  (bases 1 to 5500748)
  AUTHORS   Mingle,L.A., Cole,J.A., Lapierre,P. and Musser,K.A.
  TITLE     Paracoccus sanguinis sp. nov., isolated from clinical specimens of
            New York State patients
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5500748)
  AUTHORS   McGinnis,J.M. and Wolfgang,W.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2014) Infectious Disease, New York State
            Department of Health, 120 New Scotland Avenue, Albany, NY 12208,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JRKO00000000.1.
            The Paracoccus versutus whole genome shotgun (WGS) project has the
            project accession NZ_JRKO00000000.  This version of the project
            (01) has the accession number NZ_JRKO01000000, and consists of
            sequences JRKO01000001-JRKO01000187.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.0
            Expected Final Version :: Yes
            Genome Coverage        :: 20.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000763885.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:13:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,544
            CDSs (total)                      :: 5,490
            Genes (coding)                    :: 5,339
            CDSs (with protein)               :: 5,339
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 151
            CDSs (without protein)            :: 151
            Pseudo Genes (ambiguous residues) :: 0 of 151
            Pseudo Genes (frameshifted)       :: 38 of 151
            Pseudo Genes (incomplete)         :: 128 of 151
            Pseudo Genes (internal stop)      :: 15 of 151
            Pseudo Genes (multiple problems)  :: 27 of 151
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5500748
                     /organism="Paracoccus versutus"
                     /mol_type="genomic DNA"
                     /strain="DSM 582"
                     /isolation_source="soil"
                     /culture_collection="DSM:582"
                     /type_material="type strain of Thiobacillus versutus"
                     /db_xref="taxon:34007"
WGS         JRKO01000001-JRKO01000187
WGS_SCAFLD  NZ_JRKO01000001-NZ_JRKO01000187
//
LOCUS       NZ_LIPT01000000      4170000 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pannonibacter indicus strain DSM 23407, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LIPT00000000
VERSION     NZ_LIPT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03801379
            Assembly: GCF_001418225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pannonibacter indicus
  ORGANISM  Pannonibacter indicus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Pannonibacter.
REFERENCE   1  (bases 1 to 4170000)
  AUTHORS   Klenk,H.-P., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Ngan,C.Y.,
            Daum,C., Shapiro,N., Markowitz,V., Ivanova,N., Kyrpides,N. and
            Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-AUG-2015) Prokaryote Super Program, Joint Genome
            Institute, 2800 Mitchell Dr., B100, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LIPT00000000.1.
            The Pannonibacter indicus whole genome shotgun (WGS) project has
            the project accession NZ_LIPT00000000.  This version of the project
            (01) has the accession number NZ_LIPT01000000, and consists of
            sequences LIPT01000001-LIPT01000036.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2015
            Assembly Method        :: Allpaths v. April-2015; Velvet v.
                                      April-2015
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 359.0x
            Sequencing Technology  :: Illumina HiSeq 2500-1TB
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001418225.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:18:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,886
            CDSs (total)                      :: 3,825
            Genes (coding)                    :: 3,765
            CDSs (with protein)               :: 3,765
            Genes (RNA)                       :: 61
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 24 of 60
            Pseudo Genes (incomplete)         :: 44 of 60
            Pseudo Genes (internal stop)      :: 7 of 60
            Pseudo Genes (multiple problems)  :: 15 of 60
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4170000
                     /organism="Pannonibacter indicus"
                     /mol_type="genomic DNA"
                     /strain="DSM 23407"
                     /isolation_source="hot spring sediment"
                     /culture_collection="DSM:23407"
                     /type_material="type strain of Pannonibacter indicus"
                     /db_xref="taxon:466044"
                     /geo_loc_name="India: Orissa, Athamallik"
WGS         LIPT01000001-LIPT01000036
WGS_SCAFLD  NZ_LIPT01000001-NZ_LIPT01000036
//
LOCUS       NZ_CYHE01000000      4170000 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pannonibacter indicus strain DSM 23407, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CYHE00000000
VERSION     NZ_CYHE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03801379
            Assembly: GCF_001517385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pannonibacter indicus
  ORGANISM  Pannonibacter indicus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Pannonibacter.
REFERENCE   1
  AUTHORS   Varghese,Neha.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2015) DOE - Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CYHE00000000.1.
            The Pannonibacter indicus whole genome shotgun (WGS) project has
            the project accession NZ_CYHE00000000.  This version of the project
            (01) has the accession number NZ_CYHE01000000, and consists of
            sequences CYHE01000001-CYHE01000036.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001517385.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:16:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,886
            CDSs (total)                      :: 3,825
            Genes (coding)                    :: 3,765
            CDSs (with protein)               :: 3,765
            Genes (RNA)                       :: 61
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 24 of 60
            Pseudo Genes (incomplete)         :: 44 of 60
            Pseudo Genes (internal stop)      :: 7 of 60
            Pseudo Genes (multiple problems)  :: 15 of 60
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4170000
                     /organism="Pannonibacter indicus"
                     /mol_type="genomic DNA"
                     /strain="DSM 23407"
                     /isolation_source="hot spring sediment"
                     /culture_collection="DSM:23407"
                     /type_material="type strain of Pannonibacter indicus"
                     /db_xref="taxon:466044"
                     /geo_loc_name="India: Orissa, Athamallik"
WGS         CYHE01000001-CYHE01000036
WGS_SCAFLD  NZ_CYHE01000001-NZ_CYHE01000036
//
LOCUS       NZ_CCDG010000000     6933827 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paenibacillus camerounensis strain G4, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CCDG000000000
VERSION     NZ_CCDG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3139052
            Assembly: GCF_000723885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paenibacillus camerounensis
  ORGANISM  Paenibacillus camerounensis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1
  AUTHORS   Bittar,F. and Raoult,D.
  TITLE     Non-contiguous finished genome sequence and description of
            Paenibacillus camerounensis sp. nov
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6933827)
  AUTHORS   Urmite Genomes,U.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAR-2014) URMITE, 27 Bd J Moulin, 13385 Marseille
            Cedex 05, FRANCE
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CCDG000000000.1.
            The Paenibacillus camerounensis whole genome shotgun (WGS) project
            has the project accession NZ_CCDG000000000.  This version of the
            project (01) has the accession number NZ_CCDG010000000, and
            consists of sequences CCDG010000001-CCDG010000154.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000723885.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:28:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,109
            CDSs (total)                      :: 6,009
            Genes (coding)                    :: 5,955
            CDSs (with protein)               :: 5,955
            Genes (RNA)                       :: 100
            rRNAs                             :: 8, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1 (5S, 23S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 12 of 54
            Pseudo Genes (incomplete)         :: 44 of 54
            Pseudo Genes (internal stop)      :: 2 of 54
            Pseudo Genes (multiple problems)  :: 4 of 54
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6933827
                     /organism="Paenibacillus camerounensis"
                     /mol_type="genomic DNA"
                     /strain="G4"
                     /db_xref="taxon:1243663"
WGS         CCDG010000001-CCDG010000154
WGS_SCAFLD  NZ_CCDG010000001-NZ_CCDG010000154
//
LOCUS       NZ_FOJS01000000      3445748 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Parageobacillus thermantarcticus strain M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOJS00000000
VERSION     NZ_FOJS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05192569
            Assembly: GCF_900111865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Parageobacillus thermantarcticus
  ORGANISM  Parageobacillus thermantarcticus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Anoxybacillaceae; Parageobacillus.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOJS00000000.1.
            The Parageobacillus thermantarcticus whole genome shotgun (WGS)
            project has the project accession NZ_FOJS00000000.  This version of
            the project (01) has the accession number NZ_FOJS01000000, and
            consists of sequences FOJS01000001-FOJS01000106.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900111865.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:54:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,718
            CDSs (total)                      :: 3,618
            Genes (coding)                    :: 3,455
            CDSs (with protein)               :: 3,455
            Genes (RNA)                       :: 100
            rRNAs                             :: 7, 6, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 1, 6, 4 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 163
            CDSs (without protein)            :: 163
            Pseudo Genes (ambiguous residues) :: 0 of 163
            Pseudo Genes (frameshifted)       :: 50 of 163
            Pseudo Genes (incomplete)         :: 131 of 163
            Pseudo Genes (internal stop)      :: 16 of 163
            Pseudo Genes (multiple problems)  :: 30 of 163
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3445748
                     /organism="Parageobacillus thermantarcticus"
                     /mol_type="genomic DNA"
                     /strain="M1"
                     /type_material="type strain of Bacillus thermantarcticus"
                     /db_xref="taxon:186116"
WGS         FOJS01000001-FOJS01000106
WGS_SCAFLD  NZ_FOJS01000001-NZ_FOJS01000106
//
LOCUS       NZ_MLFN01000000      4308858 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea conspicua strain LMG 24534, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLFN00000000
VERSION     NZ_MLFN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05757366
            Assembly: GCF_002095315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea conspicua
  ORGANISM  Pantoea conspicua
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea.
REFERENCE   1  (bases 1 to 4308858)
  AUTHORS   Palmer,M., Steenkamp,E.T., Coetzee,M.P.A., Chan,W.Y., van Zyl,E.,
            De Maayer,P., Coutinho,T.A., Blom,J., Smits,T.H.M., Duffy,B. and
            Venter,S.N.
  TITLE     Phylogenomic resolution of the bacterial genus Pantoea and its
            relationship with Erwinia and Tatumella
  JOURNAL   Antonie Van Leeuwenhoek 110 (10), 1287-1309 (2017)
   PUBMED   28255640
REFERENCE   2  (bases 1 to 4308858)
  AUTHORS   Palmer,M., Steenkamp,E.T., Coetzee,M.P., Chan,W.-Y., Van Zyl,E., De
            Maayer,P., Coutinho,T.A., Blom,J., Smits,T.H., Duffy,B. and
            Venter,S.N.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-OCT-2016) Department of Microbiology and Plant
            Pathology, University of Pretoria, Lunnon street, Hillcrest,
            Pretoiria, Gauteng 0002, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLFN00000000.1.
            The Pantoea conspicua whole genome shotgun (WGS) project has the
            project accession NZ_MLFN00000000.  This version of the project
            (01) has the accession number NZ_MLFN01000000, and consists of
            sequences MLFN01000001-MLFN01000128.
            Bacteria and source DNA available from Belgian Coordinated
            collections of Microorganisms (BCCM).
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Newbler v. 2.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 88.0x
            Sequencing Technology  :: IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002095315.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:09:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,136
            CDSs (total)                      :: 4,072
            Genes (coding)                    :: 3,713
            CDSs (with protein)               :: 3,713
            Genes (RNA)                       :: 64
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 359
            CDSs (without protein)            :: 359
            Pseudo Genes (ambiguous residues) :: 0 of 359
            Pseudo Genes (frameshifted)       :: 294 of 359
            Pseudo Genes (incomplete)         :: 67 of 359
            Pseudo Genes (internal stop)      :: 17 of 359
            Pseudo Genes (multiple problems)  :: 19 of 359
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4308858
                     /organism="Pantoea conspicua"
                     /mol_type="genomic DNA"
                     /strain="LMG 24534"
                     /host="Homo sapiens"
                     /culture_collection="LMG:24534"
                     /type_material="type strain of Pantoea conspicua"
                     /db_xref="taxon:472705"
                     /geo_loc_name="France"
                     /collection_date="2008"
WGS         MLFN01000001-MLFN01000128
WGS_SCAFLD  NZ_MLFN01000001-NZ_MLFN01000128
//
LOCUS       NZ_MLFS01000000      4653282 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea wallisii strain LMG 26277, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLFS00000000
VERSION     NZ_MLFS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05907794
            Assembly: GCF_002095485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea wallisii
  ORGANISM  Pantoea wallisii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea.
REFERENCE   1  (bases 1 to 4653282)
  AUTHORS   Palmer,M., Steenkamp,E.T., Coetzee,M.P.A., Chan,W.Y., van Zyl,E.,
            De Maayer,P., Coutinho,T.A., Blom,J., Smits,T.H.M., Duffy,B. and
            Venter,S.N.
  TITLE     Phylogenomic resolution of the bacterial genus Pantoea and its
            relationship with Erwinia and Tatumella
  JOURNAL   Antonie Van Leeuwenhoek 110 (10), 1287-1309 (2017)
   PUBMED   28255640
REFERENCE   2  (bases 1 to 4653282)
  AUTHORS   Palmer,M., Steenkamp,E.T., Coetzee,M.P., Chan,W.-Y., Van Zyl,E., De
            Maayer,P., Coutinho,T.A., Blom,J., Smits,T.H., Duffy,B. and
            Venter,S.N.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-OCT-2016) Department of Microbiology and Plant
            Pathology, University of Pretoria, Lunnon Street, Hillcrest,
            Pretoiria, Gauteng 0002, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLFS00000000.1.
            The Pantoea wallisii whole genome shotgun (WGS) project has the
            project accession NZ_MLFS00000000.  This version of the project
            (01) has the accession number NZ_MLFS01000000, and consists of
            sequences MLFS01000001-MLFS01000149.
            Bacteria and source DNA available from Belgian Coordinated
            collections of Microorganisms (BCCM).
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Newbler v. 2.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 29.0x
            Sequencing Technology  :: IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002095485.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,448
            CDSs (total)                      :: 4,399
            Genes (coding)                    :: 3,953
            CDSs (with protein)               :: 3,953
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 446
            CDSs (without protein)            :: 446
            Pseudo Genes (ambiguous residues) :: 0 of 446
            Pseudo Genes (frameshifted)       :: 402 of 446
            Pseudo Genes (incomplete)         :: 55 of 446
            Pseudo Genes (internal stop)      :: 2 of 446
            Pseudo Genes (multiple problems)  :: 12 of 446
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4653282
                     /organism="Pantoea wallisii"
                     /mol_type="genomic DNA"
                     /strain="LMG 26277"
                     /host="Eucalyptus"
                     /culture_collection="LMG:26277"
                     /type_material="type strain of Pantoea wallisii"
                     /db_xref="taxon:1076551"
                     /geo_loc_name="South Africa"
                     /collection_date="2006"
WGS         MLFS01000001-MLFS01000149
WGS_SCAFLD  NZ_MLFS01000001-NZ_MLFS01000149
//
LOCUS       NZ_CBBWSX010000000   2587241 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Phenylobacterium sp. isolate
            PELAGICS-MAG-ms-bin013070-MILAE-LM-27jul20., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBBWSX000000000
VERSION     NZ_CBBWSX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117451078
            Assembly: GCF_964990305.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Phenylobacterium sp. (freshwater metagenome)
  ORGANISM  Phenylobacterium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Caulobacterales; Caulobacteraceae; Phenylobacterium.
REFERENCE   1  (bases 1 to 2587241)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JAN-2025) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBBWSX000000000.1.
            The Phenylobacterium sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBBWSX000000000.  This version of the project
            (01) has the accession number NZ_CBBWSX010000000, and consists of
            sequences CBBWSX010000001-CBBWSX010000120.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964990305.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 01:21:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,611
            CDSs (total)                      :: 2,559
            Genes (coding)                    :: 2,516
            CDSs (with protein)               :: 2,516
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 4 of 43
            Pseudo Genes (incomplete)         :: 39 of 43
            Pseudo Genes (internal stop)      :: 2 of 43
            Pseudo Genes (multiple problems)  :: 2 of 43
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2587241
                     /organism="Phenylobacterium sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-ms-bin013070-MILAE-LM-27jul20."
                     /isolation_source="Milada lake"
                     /db_xref="taxon:1871053"
                     /environmental_sample
                     /geo_loc_name="Czechia"
                     /collection_date="2020-07-27"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBBWSX010000001-CBBWSX010000120
WGS_SCAFLD  NZ_CBBWSX010000001-NZ_CBBWSX010000120
//
LOCUS       NZ_NTMH01000000      5241139 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea allii strain LMG 24248, whole genome shotgun sequencing
            project.
ACCESSION   NZ_NTMH00000000
VERSION     NZ_NTMH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07625522
            Assembly: GCF_002307475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea allii
  ORGANISM  Pantoea allii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea.
REFERENCE   1  (bases 1 to 5241139)
  AUTHORS   Tambong,J.T., Xu,R., Hsieh,S. and Rahimi,S.
  TITLE     Draft genome sequence of the type strain of Pantoea allii and
            development of molecular diagnostic tools
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5241139)
  AUTHORS   Tambong,J.T., Xu,R., Hsieh,S. and Rahimi,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2017) Agriculture and Agri-Food Canada, Ottawa
            Research and Development Center, 960 Carling Avenue, Ottawa,
            Ontario K1A 0C6, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NTMH00000000.1.
            The Pantoea allii whole genome shotgun (WGS) project has the
            project accession NZ_NTMH00000000.  This version of the project
            (01) has the accession number NZ_NTMH01000000, and consists of
            sequences NTMH01000001-NTMH01000057.
            Bacteria and source DNA available from James Tambong/Ottawa
            Research and Development Centre, 960 Carling Avenue, Ottawa,
            Ontario, Canada. K1A 0C6.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: ABySS v. 1.5.2
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 71.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002307475.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:19:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,927
            CDSs (total)                      :: 4,832
            Genes (coding)                    :: 4,731
            CDSs (with protein)               :: 4,731
            Genes (RNA)                       :: 95
            rRNAs                             :: 5, 5, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 1, 4, 3 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 101
            CDSs (without protein)            :: 101
            Pseudo Genes (ambiguous residues) :: 0 of 101
            Pseudo Genes (frameshifted)       :: 49 of 101
            Pseudo Genes (incomplete)         :: 68 of 101
            Pseudo Genes (internal stop)      :: 30 of 101
            Pseudo Genes (multiple problems)  :: 31 of 101
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5241139
                     /organism="Pantoea allii"
                     /mol_type="genomic DNA"
                     /strain="LMG 24248"
                     /host="Onion"
                     /culture_collection="LMG:24248"
                     /type_material="type strain of Pantoea allii"
                     /db_xref="taxon:574096"
                     /geo_loc_name="South Africa"
                     /collection_date="2004"
WGS         NTMH01000001-NTMH01000057
WGS_SCAFLD  NZ_NTMH01000001-NZ_NTMH01000057
//
LOCUS       NZ_JBVMVO010000000   2284879 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pasteurella multocida strain SEN2_S6, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBVMVO000000000
VERSION     NZ_JBVMVO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54951251
            Assembly: GCF_056849195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pasteurella multocida
  ORGANISM  Pasteurella multocida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Pasteurella.
REFERENCE   1  (bases 1 to 2284879)
  AUTHORS   Lagrave,L., Oviedo,E., Lopez,A., Ortiz,K., Asilvera,N. and
            Quintana,S.A.
  TITLE     Genome sequence of Pasteurella multocida strain SEN2_26 isolated
            from Sus scrofa in Paraguay
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2284879)
  AUTHORS   Lagrave,L., Oviedo,E., Lopez,A., Ortiz,K., Asilvera,N. and
            Quintana,S.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-FEB-2026) Department of Biotechnology, FACEN-UNA
            (Facultad de Ciencias Exactas y Naturales, Universidad Nacional de
            Asuncion), General Patricio Escobar, San Lorenzo 1039, Paraguay
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVMVO000000000.1.
            The Pasteurella multocida whole genome shotgun (WGS) project has
            the project accession NZ_JBVMVO000000000.  This version of the
            project (01) has the accession number NZ_JBVMVO010000000, and
            consists of sequences JBVMVO010000001-JBVMVO010000033.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from SENACSA - Servicio Nacional
            de Calidad y Salud Animal, Paraguay.
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: NOV-2025
            Assembly Method           :: SPAdes v. 3.15.5
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: GCF_900187275.1
            Genome Coverage           :: 9.0x
            Sequencing Technology     :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056849195.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 01:33:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,182
            CDSs (total)                      :: 2,108
            Genes (coding)                    :: 2,087
            CDSs (with protein)               :: 2,087
            Genes (RNA)                       :: 74
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 4 of 21
            Pseudo Genes (incomplete)         :: 17 of 21
            Pseudo Genes (internal stop)      :: 1 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2284879
                     /organism="Pasteurella multocida"
                     /mol_type="genomic DNA"
                     /strain="SEN2_S6"
                     /host="Sus scrofa"
                     /db_xref="taxon:747"
                     /geo_loc_name="Paraguay: Chaco"
                     /collection_date="2025-10-30"
WGS         JBVMVO010000001-JBVMVO010000033
WGS_SCAFLD  NZ_JBVMVO010000001-NZ_JBVMVO010000033
//
LOCUS       NZ_LVWI01000000      7118381 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paenibacillus helianthi strain P26E, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LVWI00000000
VERSION     NZ_LVWI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04589806
            Assembly: GCF_001909055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paenibacillus helianthi
  ORGANISM  Paenibacillus helianthi
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (bases 1 to 7118381)
  AUTHORS   Sant'Anna,F.H., Ambrosini,A., Souza,R., Bach,E., Fernandes,G.,
            Balsanelli,E., Baura,V.A., Souza,E.M. and Passaglia,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAR-2016) Genetica, UFRGS, Av. Bento Goncalves 9500
            Predio 43312 Sala 207b, Porto Alegre, Rio Grande do Sul 91540-000,
            Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LVWI00000000.1.
            The Paenibacillus helianthi whole genome shotgun (WGS) project has
            the project accession NZ_LVWI00000000.  This version of the project
            (01) has the accession number NZ_LVWI01000000, and consists of
            sequences LVWI01000001-LVWI01000124.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: A5 pipeline v. 20140604
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 65.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001909055.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:25:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,328
            CDSs (total)                      :: 6,188
            Genes (coding)                    :: 6,067
            CDSs (with protein)               :: 6,067
            Genes (RNA)                       :: 140
            rRNAs                             :: 11, 21, 16 (5S, 16S, 23S)
            complete rRNAs                    :: 11 (5S)
            partial rRNAs                     :: 21, 16 (16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 121
            Pseudo Genes (ambiguous residues) :: 0 of 121
            Pseudo Genes (frameshifted)       :: 37 of 121
            Pseudo Genes (incomplete)         :: 98 of 121
            Pseudo Genes (internal stop)      :: 11 of 121
            Pseudo Genes (multiple problems)  :: 23 of 121
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7118381
                     /organism="Paenibacillus helianthi"
                     /mol_type="genomic DNA"
                     /strain="P26E"
                     /isolation_source="rhizosphere"
                     /host="Helianthus annuus L."
                     /type_material="type material of Paenibacillus helianthi"
                     /db_xref="taxon:1349432"
                     /geo_loc_name="Brazil: Encruzilhada do Sul"
                     /collection_date="2009"
WGS         LVWI01000001-LVWI01000124
WGS_SCAFLD  NZ_LVWI01000001-NZ_LVWI01000124
//
LOCUS       NZ_LRUE01000000      4806666 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudoalteromonas shioyasakiensis strain JCM 18891, whole genome
            shotgun sequencing project.
ACCESSION   NZ_LRUE00000000
VERSION     NZ_LRUE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04442129
            Assembly: GCF_001550135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudoalteromonas shioyasakiensis
  ORGANISM  Pseudoalteromonas shioyasakiensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (bases 1 to 4806666)
  AUTHORS   Cheng,H., Yan,J., Wu,Y.-H. and Xu,X.-W.
  TITLE     Draft Genome Sequence of Pseudoalteromonas shioyasakiensis JCM18891
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4806666)
  AUTHORS   Cheng,H., Yan,J., Wu,Y.-H. and Xu,X.-W.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JAN-2016) Laboratory of Marine Ecosystem and
            Biogeochemistry, Second Institute of Oceanography, State Oceanic
            Administration, 36th Baochu Bei Road, Hangzhou, Zhejiang 310012,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LRUE00000000.1.
            The Pseudoalteromonas shioyasakiensis whole genome shotgun (WGS)
            project has the project accession NZ_LRUE00000000.  This version of
            the project (01) has the accession number NZ_LRUE01000000, and
            consists of sequences LRUE01000001-LRUE01000025.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 18-JAN-2016
            Assembly Method        :: ABySS v. 1.5.2
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 154.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001550135.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:00:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,376
            CDSs (total)                      :: 4,284
            Genes (coding)                    :: 4,264
            CDSs (with protein)               :: 4,264
            Genes (RNA)                       :: 92
            rRNAs                             :: 9, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 9 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 7 of 20
            Pseudo Genes (incomplete)         :: 12 of 20
            Pseudo Genes (internal stop)      :: 3 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4806666
                     /organism="Pseudoalteromonas shioyasakiensis"
                     /mol_type="genomic DNA"
                     /strain="JCM 18891"
                     /isolation_source="sediment"
                     /type_material="type strain of Pseudoalteromonas
                     shioyasakiensis"
                     /db_xref="taxon:1190813"
                     /geo_loc_name="Pacific Ocean: Shioyasaki offshore"
                     /lat_lon="37.12 N 142.42 E"
                     /collection_date="2011"
WGS         LRUE01000001-LRUE01000025
WGS_SCAFLD  NZ_LRUE01000001-NZ_LRUE01000025
//
LOCUS       NZ_JPIN01000000      2703110 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudidiomarina atlantica strain MCCC 1A10513, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JPIN00000000
VERSION     NZ_JPIN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02910054
            Assembly: GCF_000753735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudidiomarina atlantica
  ORGANISM  Pseudidiomarina atlantica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Idiomarinaceae; Pseudidiomarina.
REFERENCE   1  (bases 1 to 2703110)
  AUTHORS   Du,J., Lai,Q., Liu,Y., Du,Y., Liu,X., Sun,F. and Shao,Z.
  TITLE     Idiomarina atlantica sp. nov., a marine bacterium isolated from the
            deep sea sediment of the North Atlantic Ocean
  JOURNAL   Antonie Van Leeuwenhoek 107 (2), 393-401 (2015)
   PUBMED   25417054
REFERENCE   2  (bases 1 to 2703110)
  AUTHORS   Du,J., Lai,Q. and Shao,Z.
  TITLE     Draft genome sequence of Idiomarina sp. MCCC 1A10513
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 2703110)
  AUTHORS   Du,J., Lai,Q. and Shao,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JUN-2014) The Third Institute of Oceanography, State
            of Oceanic Administration (SOA), Daxue Road 178#, Xiamen, Fujian
            361005, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JPIN00000000.1.
            The Pseudidiomarina atlantica whole genome shotgun (WGS) project
            has the project accession NZ_JPIN00000000.  This version of the
            project (01) has the accession number NZ_JPIN01000000, and consists
            of sequences JPIN01000001-JPIN01000049.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000753735.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:04:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,592
            CDSs (total)                      :: 2,532
            Genes (coding)                    :: 2,515
            CDSs (with protein)               :: 2,515
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 17
            CDSs (without protein)            :: 17
            Pseudo Genes (ambiguous residues) :: 0 of 17
            Pseudo Genes (frameshifted)       :: 1 of 17
            Pseudo Genes (incomplete)         :: 16 of 17
            Pseudo Genes (internal stop)      :: 1 of 17
            Pseudo Genes (multiple problems)  :: 1 of 17
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2703110
                     /organism="Pseudidiomarina atlantica"
                     /mol_type="genomic DNA"
                     /strain="MCCC 1A10513"
                     /isolation_source="sediment"
                     /culture_collection="MCCC:1A10513"
                     /type_material="type strain of Idiomarina atlantica"
                     /db_xref="taxon:1517416"
                     /geo_loc_name="Atlantic Ocean: North Atlantic"
                     /collection_date="2011"
WGS         JPIN01000001-JPIN01000049
WGS_SCAFLD  NZ_JPIN01000001-NZ_JPIN01000049
//
LOCUS       NZ_LLWC01000000      3746600 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Polycladidibacter hongkongensis strain UST20140214-015B, whole
            genome shotgun sequencing project.
ACCESSION   NZ_LLWC00000000
VERSION     NZ_LLWC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04192297
            Assembly: GCF_001561995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Polycladidibacter hongkongensis
  ORGANISM  Polycladidibacter hongkongensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Polycladidibacter.
REFERENCE   1  (bases 1 to 3746600)
  AUTHORS   Zhang,Y., Li,Q., Tian,R., Lai,Q. and Xu,Y.
  TITLE     The genome sequence of bacteria isolated from flatworm
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3746600)
  AUTHORS   Zhang,Y., Li,Q., Tian,R., Lai,Q. and Xu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2015) College of Life Science, Shenzhen
            University, 3688 Nanhai Ave., Shenzhen, Guangdong 518100, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LLWC00000000.1.
            The Polycladidibacter hongkongensis whole genome shotgun (WGS)
            project has the project accession NZ_LLWC00000000.  This version of
            the project (01) has the accession number NZ_LLWC01000000, and
            consists of sequences LLWC01000001-LLWC01000039.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. Mar-2015
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001561995.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:11:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,530
            CDSs (total)                      :: 3,461
            Genes (coding)                    :: 3,418
            CDSs (with protein)               :: 3,418
            Genes (RNA)                       :: 69
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 11 of 43
            Pseudo Genes (incomplete)         :: 33 of 43
            Pseudo Genes (internal stop)      :: 8 of 43
            Pseudo Genes (multiple problems)  :: 9 of 43
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3746600
                     /organism="Polycladidibacter hongkongensis"
                     /mol_type="genomic DNA"
                     /strain="UST20140214-015B"
                     /isolation_source="Flatworm"
                     /type_material="type strain of Pseudovibrio hongkongensis"
                     /db_xref="taxon:1647556"
                     /collection_date="2014-01"
WGS         LLWC01000001-LLWC01000039
WGS_SCAFLD  NZ_LLWC01000001-NZ_LLWC01000039
//
LOCUS       NZ_FNZM01000000      8579717 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paraburkholderia tropica strain LMG 22274, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNZM00000000
VERSION     NZ_FNZM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05216550
            Assembly: GCF_900109265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paraburkholderia tropica
  ORGANISM  Paraburkholderia tropica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNZM00000000.1.
            The Paraburkholderia tropica whole genome shotgun (WGS) project has
            the project accession NZ_FNZM00000000.  This version of the project
            (01) has the accession number NZ_FNZM01000000, and consists of
            sequences FNZM01000001-FNZM01000061.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900109265.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:24:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,726
            CDSs (total)                      :: 7,664
            Genes (coding)                    :: 7,540
            CDSs (with protein)               :: 7,540
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 124
            CDSs (without protein)            :: 124
            Pseudo Genes (ambiguous residues) :: 0 of 124
            Pseudo Genes (frameshifted)       :: 28 of 124
            Pseudo Genes (incomplete)         :: 110 of 124
            Pseudo Genes (internal stop)      :: 8 of 124
            Pseudo Genes (multiple problems)  :: 21 of 124
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8579717
                     /organism="Paraburkholderia tropica"
                     /mol_type="genomic DNA"
                     /strain="LMG 22274"
                     /type_material="type strain of Burkholderia tropica"
                     /db_xref="taxon:92647"
WGS         FNZM01000001-FNZM01000061
WGS_SCAFLD  NZ_FNZM01000001-NZ_FNZM01000061
//
LOCUS       NZ_LNRC01000000      4629225 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Photobacterium leiognathi strain CUB1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LNRC00000000
VERSION     NZ_LNRC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04279315
            Assembly: GCF_001557755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Photobacterium leiognathi
  ORGANISM  Photobacterium leiognathi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
REFERENCE   1  (bases 1 to 4629225)
  AUTHORS   Pollak,B. and Kan,A.
  TITLE     Refactoring and directed evolution of the lux operon from
            environmental marine bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4629225)
  AUTHORS   Pollak,B. and Kan,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2015) Plant Sciences, University of Cambridge,
            Downing Street, Cambridge CB2 3EA, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LNRC00000000.1.
            The Photobacterium leiognathi whole genome shotgun (WGS) project
            has the project accession NZ_LNRC00000000.  This version of the
            project (01) has the accession number NZ_LNRC01000000, and consists
            of sequences LNRC01000001-LNRC01000090.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SPAdes v. 3.5.0
            Genome Coverage       :: 37.5
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001557755.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:14:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,276
            CDSs (total)                      :: 4,028
            Genes (coding)                    :: 4,004
            CDSs (with protein)               :: 4,004
            Genes (RNA)                       :: 248
            rRNAs                             :: 16, 20, 13 (5S, 16S, 23S)
            complete rRNAs                    :: 14, 1 (5S, 16S)
            partial rRNAs                     :: 2, 19, 13 (5S, 16S, 23S)
            tRNAs                             :: 195
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 11 of 24
            Pseudo Genes (incomplete)         :: 17 of 24
            Pseudo Genes (internal stop)      :: 3 of 24
            Pseudo Genes (multiple problems)  :: 5 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4629225
                     /organism="Photobacterium leiognathi"
                     /mol_type="genomic DNA"
                     /strain="CUB1"
                     /isolation_source="Shore seawater"
                     /db_xref="taxon:553611"
                     /geo_loc_name="Cuba: Varadero"
                     /lat_lon="23.1996637 N 81.1590006 W"
                     /collection_date="15-Feb-2014"
                     /collected_by="Bernardo Pollak"
                     /identified_by="Bernardo Pollak"
WGS         LNRC01000001-LNRC01000090
WGS_SCAFLD  NZ_LNRC01000001-NZ_LNRC01000090
//
LOCUS       NZ_MBTG01000000      9184169 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paenibacillus ferrarius strain CY1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MBTG00000000
VERSION     NZ_MBTG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05437217
            Assembly: GCF_002027705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paenibacillus ferrarius
  ORGANISM  Paenibacillus ferrarius
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (bases 1 to 9184169)
  AUTHORS   Guo,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-JUL-2016) Microbiology, Huazhong Agricultural
            University, College of Life Science and Technology, No. 1 Shizishan
            Street, Hongshan District, Wuhan, Hubei 430070, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MBTG00000000.1.
            The Paenibacillus ferrarius whole genome shotgun (WGS) project has
            the project accession NZ_MBTG00000000.  This version of the project
            (01) has the accession number NZ_MBTG01000000, and consists of
            sequences MBTG01000001-MBTG01000073.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 2.04
            Genome Coverage       :: 289.77x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002027705.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:25:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,241
            CDSs (total)                      :: 8,161
            Genes (coding)                    :: 8,001
            CDSs (with protein)               :: 8,001
            Genes (RNA)                       :: 80
            rRNAs                             :: 4, 11, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 1, 11, 3 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 160
            CDSs (without protein)            :: 160
            Pseudo Genes (ambiguous residues) :: 0 of 160
            Pseudo Genes (frameshifted)       :: 57 of 160
            Pseudo Genes (incomplete)         :: 126 of 160
            Pseudo Genes (internal stop)      :: 10 of 160
            Pseudo Genes (multiple problems)  :: 29 of 160
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9184169
                     /organism="Paenibacillus ferrarius"
                     /mol_type="genomic DNA"
                     /strain="CY1"
                     /isolation_source="iron mineral soil"
                     /type_material="type strain of Paenibacillus ferrarius"
                     /db_xref="taxon:1469647"
                     /geo_loc_name="China: Zhangjiajie"
                     /collection_date="2014-02-10"
WGS         MBTG01000001-MBTG01000073
WGS_SCAFLD  NZ_MBTG01000001-NZ_MBTG01000073
//
LOCUS       NZ_CAIU01000000      4612407 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudaminobacter salicylatoxidans KCT001, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CAIU00000000
VERSION     NZ_CAIU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2271990
            Assembly: GCF_000304395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudaminobacter salicylatoxidans KCT001
  ORGANISM  Pseudaminobacter salicylatoxidans KCT001
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Pseudaminobacter.
REFERENCE   1
  AUTHORS   Masrure,A., Chayan,R., Prosenjit,P. and Wriddhiman,G.
  TITLE     Whole-genome shotgun sequencing of the sulfur-oxidizing
            chemoautotroph Pseudaminobacter salicylatoxidans KCT001
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4612407)
  AUTHORS   Ghosh,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-MAY-2012) Bose Institute, Microbiology, P-1/12 CIT
            Scheme VII M, Kolkata, West, Bengal700 054, INDIA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAIU00000000.1.
            The Pseudaminobacter salicylatoxidans KCT001 whole genome shotgun
            (WGS) project has the project accession NZ_CAIU00000000.  This
            version of the project (01) has the accession number
            NZ_CAIU01000000, and consists of sequences
            CAIU01000001-CAIU01000053.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000304395.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:31:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,524
            CDSs (total)                      :: 4,463
            Genes (coding)                    :: 4,148
            CDSs (with protein)               :: 4,148
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 4 (16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 315
            CDSs (without protein)            :: 315
            Pseudo Genes (ambiguous residues) :: 0 of 315
            Pseudo Genes (frameshifted)       :: 262 of 315
            Pseudo Genes (incomplete)         :: 78 of 315
            Pseudo Genes (internal stop)      :: 12 of 315
            Pseudo Genes (multiple problems)  :: 31 of 315
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4612407
                     /organism="Pseudaminobacter salicylatoxidans KCT001"
                     /mol_type="genomic DNA"
                     /strain="KCT001"
                     /culture_collection="MTCC:7265"
                     /db_xref="taxon:1192868"
WGS         CAIU01000001-CAIU01000053
WGS_SCAFLD  NZ_CAIU01000001-NZ_CAIU01000053
//
LOCUS       NZ_FWWV01000000      2916904 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pasteurella testudinis DSM 23072, whole genome shotgun sequencing
            project.
ACCESSION   NZ_FWWV00000000
VERSION     NZ_FWWV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05660772
            Assembly: GCF_900176075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pasteurella testudinis DSM 23072
  ORGANISM  Pasteurella testudinis DSM 23072
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Pasteurella.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-APR-2017) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FWWV00000000.1.
            The Pasteurella testudinis DSM 23072 whole genome shotgun (WGS)
            project has the project accession NZ_FWWV00000000.  This version of
            the project (01) has the accession number NZ_FWWV01000000, and
            consists of sequences FWWV01000001-FWWV01000069.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900176075.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:46:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,854
            CDSs (total)                      :: 2,795
            Genes (coding)                    :: 2,754
            CDSs (with protein)               :: 2,754
            Genes (RNA)                       :: 59
            rRNAs                             :: 5, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 41
            CDSs (without protein)            :: 41
            Pseudo Genes (ambiguous residues) :: 0 of 41
            Pseudo Genes (frameshifted)       :: 7 of 41
            Pseudo Genes (incomplete)         :: 32 of 41
            Pseudo Genes (internal stop)      :: 5 of 41
            Pseudo Genes (multiple problems)  :: 2 of 41
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2916904
                     /organism="Pasteurella testudinis DSM 23072"
                     /mol_type="genomic DNA"
                     /strain="DSM 23072"
                     /type_material="type strain of Pasteurella testudinis"
                     /db_xref="taxon:1122938"
                     /geo_loc_name="USA: southern California, Mojave Desert"
WGS         FWWV01000001-FWWV01000069
WGS_SCAFLD  NZ_FWWV01000001-NZ_FWWV01000069
//
LOCUS       NZ_FORC01000000      5107502 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Phytopseudomonas argentinensis strain LMG 22563, whole genome
            shotgun sequencing project.
ACCESSION   NZ_FORC00000000
VERSION     NZ_FORC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05216602
            Assembly: GCF_900113905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Phytopseudomonas argentinensis
  ORGANISM  Phytopseudomonas argentinensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Phytopseudomonas.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FORC00000000.1.
            The Phytopseudomonas argentinensis whole genome shotgun (WGS)
            project has the project accession NZ_FORC00000000.  This version of
            the project (01) has the accession number NZ_FORC01000000, and
            consists of sequences FORC01000001-FORC01000015.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900113905.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:05:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,745
            CDSs (total)                      :: 4,677
            Genes (coding)                    :: 4,646
            CDSs (with protein)               :: 4,646
            Genes (RNA)                       :: 68
            rRNAs                             :: 4, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 10 of 31
            Pseudo Genes (incomplete)         :: 21 of 31
            Pseudo Genes (internal stop)      :: 3 of 31
            Pseudo Genes (multiple problems)  :: 3 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5107502
                     /organism="Phytopseudomonas argentinensis"
                     /mol_type="genomic DNA"
                     /strain="LMG 22563"
                     /type_material="type strain of Pseudomonas argentinensis"
                     /db_xref="taxon:289370"
WGS         FORC01000001-FORC01000015
WGS_SCAFLD  NZ_FORC01000001-NZ_FORC01000015
//
LOCUS       NZ_FNDI01000000     10299604 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paraburkholderia steynii strain YR281, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNDI00000000
VERSION     NZ_FNDI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04487926
            Assembly: GCF_900100565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paraburkholderia steynii
  ORGANISM  Paraburkholderia steynii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNDI00000000.1.
            The Paraburkholderia steynii whole genome shotgun (WGS) project has
            the project accession NZ_FNDI00000000.  This version of the project
            (01) has the accession number NZ_FNDI01000000, and consists of
            sequences FNDI01000001-FNDI01000086.
            The organism was changed from 'Burkholderia sp. yr281' to
            'Paraburkholderia steynii' in March  2020.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_900100565.1
            Current Name        :: Paraburkholderia steynii
            Previous Name       :: Burkholderia sp. yr281
            Date Updated        :: 2020-03-09
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_004334975.1
            A1 Name             :: Paraburkholderia steynii
            A1 ANI              :: 96.76%
            A1 Query Coverage   :: 78.19%
            A1 Subject Coverage :: 70.35%
            Analysis 2 (A2)     :: Query vs. NO-TYPE genome for previous name
            A2 Genome (subject) :: no type
            A2 Name             :: Burkholderia sp. yr281
            A2 ANI              :: 0%
            A2 Query Coverage   :: 0%
            A2 Subject Coverage :: 0%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900100565.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:25:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 9,260
            CDSs (total)                      :: 9,199
            Genes (coding)                    :: 9,043
            CDSs (with protein)               :: 9,043
            Genes (RNA)                       :: 61
            rRNAs                             :: 6, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 156
            CDSs (without protein)            :: 156
            Pseudo Genes (ambiguous residues) :: 0 of 156
            Pseudo Genes (frameshifted)       :: 50 of 156
            Pseudo Genes (incomplete)         :: 128 of 156
            Pseudo Genes (internal stop)      :: 24 of 156
            Pseudo Genes (multiple problems)  :: 38 of 156
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10299604
                     /organism="Paraburkholderia steynii"
                     /mol_type="genomic DNA"
                     /strain="YR281"
                     /db_xref="taxon:1245441"
WGS         FNDI01000001-FNDI01000086
WGS_SCAFLD  NZ_FNDI01000001-NZ_FNDI01000086
//
LOCUS       NZ_FRBQ01000000      4808353 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Phytopseudomonas punonensis strain CECT 8089, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FRBQ00000000
VERSION     NZ_FRBQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05216288
            Assembly: GCF_900142655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Phytopseudomonas punonensis
  ORGANISM  Phytopseudomonas punonensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Phytopseudomonas.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FRBQ00000000.1.
            The Phytopseudomonas punonensis whole genome shotgun (WGS) project
            has the project accession NZ_FRBQ00000000.  This version of the
            project (01) has the accession number NZ_FRBQ01000000, and consists
            of sequences FRBQ01000001-FRBQ01000020.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900142655.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:05:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,519
            CDSs (total)                      :: 4,456
            Genes (coding)                    :: 4,423
            CDSs (with protein)               :: 4,423
            Genes (RNA)                       :: 63
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 18 of 33
            Pseudo Genes (incomplete)         :: 16 of 33
            Pseudo Genes (internal stop)      :: 3 of 33
            Pseudo Genes (multiple problems)  :: 3 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4808353
                     /organism="Phytopseudomonas punonensis"
                     /mol_type="genomic DNA"
                     /strain="CECT 8089"
                     /type_material="type strain of Pseudomonas punonensis"
                     /db_xref="taxon:1220495"
WGS         FRBQ01000001-FRBQ01000020
WGS_SCAFLD  NZ_FRBQ01000001-NZ_FRBQ01000020
//
LOCUS       NZ_PUDR01000000      4780018 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pannonibacter carbonis strain Q4.6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_PUDR00000000
VERSION     NZ_PUDR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08278417
            Assembly: GCF_003012935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pannonibacter carbonis
  ORGANISM  Pannonibacter carbonis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Pannonibacter.
REFERENCE   1  (bases 1 to 4780018)
  AUTHORS   Xi,L.
  TITLE     Pannonibacter carbonis sp. nov. isolated from coal mine water
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4780018)
  AUTHORS   Xi,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2018) Center for Bioengineering and
            Biotechnology, China University of Petroleum, No. 66 Changjiang
            West Road, Qingdao, Shandong 266580, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PUDR00000000.1.
            The Pannonibacter carbonis whole genome shotgun (WGS) project has
            the project accession NZ_PUDR00000000.  This version of the project
            (01) has the accession number NZ_PUDR01000000, and consists of
            sequences PUDR01000001-PUDR01000033.
            Bacteria and source DNA available from Pannonibacter carbonis sp.
            nov.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003012935.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:40:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,402
            CDSs (total)                      :: 4,344
            Genes (coding)                    :: 4,332
            CDSs (with protein)               :: 4,332
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 1 of 12
            Pseudo Genes (multiple problems)  :: 1 of 12
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4780018
                     /organism="Pannonibacter carbonis"
                     /mol_type="genomic DNA"
                     /strain="Q4.6"
                     /isolation_source="coal mine water"
                     /type_material="type strain of Pannonibacter carbonis"
                     /db_xref="taxon:2067569"
                     /geo_loc_name="China: Jinchen, Shanxi Province"
                     /collection_date="2016-04"
WGS         PUDR01000001-PUDR01000033
WGS_SCAFLD  NZ_PUDR01000001-NZ_PUDR01000033
//
LOCUS       NZ_FOMO01000000      4992003 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Phytopseudomonas straminea strain JCM 2783, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOMO00000000
VERSION     NZ_FOMO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05216372
            Assembly: GCF_900112645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Phytopseudomonas straminea
  ORGANISM  Phytopseudomonas straminea
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Phytopseudomonas.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOMO00000000.1.
            The Phytopseudomonas straminea whole genome shotgun (WGS) project
            has the project accession NZ_FOMO00000000.  This version of the
            project (01) has the accession number NZ_FOMO01000000, and consists
            of sequences FOMO01000001-FOMO01000021.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900112645.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:07:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,652
            CDSs (total)                      :: 4,588
            Genes (coding)                    :: 4,558
            CDSs (with protein)               :: 4,558
            Genes (RNA)                       :: 64
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 30
            CDSs (without protein)            :: 30
            Pseudo Genes (ambiguous residues) :: 0 of 30
            Pseudo Genes (frameshifted)       :: 11 of 30
            Pseudo Genes (incomplete)         :: 15 of 30
            Pseudo Genes (internal stop)      :: 6 of 30
            Pseudo Genes (multiple problems)  :: 2 of 30
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4992003
                     /organism="Phytopseudomonas straminea"
                     /mol_type="genomic DNA"
                     /strain="JCM 2783"
                     /type_material="type strain of Pseudomonas straminea"
                     /db_xref="taxon:47882"
WGS         FOMO01000001-FOMO01000021
WGS_SCAFLD  NZ_FOMO01000001-NZ_FOMO01000021
//
LOCUS       NZ_FUZX01000000     10793882 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paraburkholderia hospita strain YR277, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FUZX00000000
VERSION     NZ_FUZX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05446934
            Assembly: GCF_900168175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paraburkholderia hospita
  ORGANISM  Paraburkholderia hospita
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2017) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FUZX00000000.1.
            The Paraburkholderia hospita whole genome shotgun (WGS) project has
            the project accession NZ_FUZX00000000.  This version of the project
            (01) has the accession number NZ_FUZX01000000, and consists of
            sequences FUZX01000001-FUZX01000004.
            The organism was changed from 'Burkholderia sp. YR277' to
            'Paraburkholderia hospita' in March  2020.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_900168175.1
            Current Name        :: Paraburkholderia hospita
            Previous Name       :: Burkholderia sp. YR277
            Date Updated        :: 2020-03-09
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_900108355.1
            A1 Name             :: Paraburkholderia hospita
            A1 ANI              :: 98.12%
            A1 Query Coverage   :: 84.67%
            A1 Subject Coverage :: 81.61%
            Analysis 2 (A2)     :: Query vs. NO-TYPE genome for previous name
            A2 Genome (subject) :: no type
            A2 Name             :: Burkholderia sp. YR277
            A2 ANI              :: 0%
            A2 Query Coverage   :: 0%
            A2 Subject Coverage :: 0%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900168175.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:40:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 9,890
            CDSs (total)                      :: 9,801
            Genes (coding)                    :: 9,541
            CDSs (with protein)               :: 9,541
            Genes (RNA)                       :: 89
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 260
            CDSs (without protein)            :: 260
            Pseudo Genes (ambiguous residues) :: 0 of 260
            Pseudo Genes (frameshifted)       :: 111 of 260
            Pseudo Genes (incomplete)         :: 205 of 260
            Pseudo Genes (internal stop)      :: 24 of 260
            Pseudo Genes (multiple problems)  :: 75 of 260
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10793882
                     /organism="Paraburkholderia hospita"
                     /mol_type="genomic DNA"
                     /strain="YR277"
                     /db_xref="taxon:169430"
WGS         FUZX01000001-FUZX01000004
WGS_SCAFLD  NZ_FUZX01000001-NZ_FUZX01000004
//
LOCUS       NZ_LXFV01000000      4785880 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pectobacterium peruviense strain IFB5232, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LXFV00000000
VERSION     NZ_LXFV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04526254
            Assembly: GCF_002847345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pectobacterium peruviense
  ORGANISM  Pectobacterium peruviense
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (bases 1 to 4785880)
  AUTHORS   Waleron,M., Misztak,A.E. and Waleron,K.
  TITLE     New species of Pectobacterium
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4785880)
  AUTHORS   Waleron,M., Misztak,A.E. and Waleron,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2016) Department of Biotechnology, University of
            Gdansk, Abrahama 58, Gdansk, Pomorskie 80-307, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LXFV00000000.1.
            The Pectobacterium peruviense whole genome shotgun (WGS) project
            has the project accession NZ_LXFV00000000.  This version of the
            project (01) has the accession number NZ_LXFV01000000, and consists
            of sequences LXFV01000001-LXFV01000060.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2013
            Assembly Method        :: GS De Novo Assembler v. 2.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 53.0x
            Sequencing Technology  :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002847345.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:24:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,286
            CDSs (total)                      :: 4,208
            Genes (coding)                    :: 4,169
            CDSs (with protein)               :: 4,169
            Genes (RNA)                       :: 78
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 16 of 39
            Pseudo Genes (incomplete)         :: 24 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 7 of 39
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4785880
                     /organism="Pectobacterium peruviense"
                     /mol_type="genomic DNA"
                     /strain="IFB5232"
                     /isolation_source="potato tuber"
                     /type_material="type strain of Pectobacterium peruviense"
                     /db_xref="taxon:2066479"
                     /geo_loc_name="USA: Arizona"
                     /altitude="3300 m"
                     /collection_date="1979"
WGS         LXFV01000001-LXFV01000060
WGS_SCAFLD  NZ_LXFV01000001-NZ_LXFV01000060
//
LOCUS       NZ_FNKX01000000      8977308 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paraburkholderia tuberum strain DUS833, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNKX00000000
VERSION     NZ_FNKX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05445850
            Assembly: GCF_900101795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paraburkholderia tuberum
  ORGANISM  Paraburkholderia tuberum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNKX00000000.1.
            The Paraburkholderia tuberum whole genome shotgun (WGS) project has
            the project accession NZ_FNKX00000000.  This version of the project
            (01) has the accession number NZ_FNKX01000000, and consists of
            sequences FNKX01000001-FNKX01000005.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900101795.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:44:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,425
            CDSs (total)                      :: 8,333
            Genes (coding)                    :: 7,856
            CDSs (with protein)               :: 7,856
            Genes (RNA)                       :: 92
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 477
            CDSs (without protein)            :: 477
            Pseudo Genes (ambiguous residues) :: 0 of 477
            Pseudo Genes (frameshifted)       :: 169 of 477
            Pseudo Genes (incomplete)         :: 404 of 477
            Pseudo Genes (internal stop)      :: 30 of 477
            Pseudo Genes (multiple problems)  :: 120 of 477
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8977308
                     /organism="Paraburkholderia tuberum"
                     /mol_type="genomic DNA"
                     /strain="DUS833"
                     /db_xref="taxon:157910"
WGS         FNKX01000001-FNKX01000005
WGS_SCAFLD  NZ_FNKX01000001-NZ_FNKX01000005
//
LOCUS       NZ_PDVY01000000      4992613 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pectobacterium versatile strain PB69, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PDVY00000000
VERSION     NZ_PDVY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07816141
            Assembly: GCF_002921285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pectobacterium versatile
  ORGANISM  Pectobacterium versatile
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (bases 1 to 4992613)
  AUTHORS   Shirshikov,F.V., Miroshnikov,K., Toshakov,S.V., Kabanova,A.P.,
            Barannik,A.P., Shneider,M., Ignatov,A.N. and Miroshnikov,K.A.
  TITLE     First report on the novel genomospecies/subspecies of
            Pectobacterium carotovorum in Russia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4992613)
  AUTHORS   Shirshikov,F.V., Miroshnikov,K., Toshakov,S.V., Kabanova,A.P.,
            Barannik,A.P., Shneider,M., Ignatov,A.N. and Miroshnikov,K.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-DEC-2017) Collection of Phytopathogens,
            Phytoengineering R&D Centre, LLC, Moscow Street, 58, Dmitrov
            Region, Rogachevo 141880, Russian Federation
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PDVY00000000.1.
            The Pectobacterium versatile whole genome shotgun (WGS) project has
            the project accession NZ_PDVY00000000.  This version of the project
            (01) has the accession number NZ_PDVY01000000, and consists of
            sequences PDVY01000001-PDVY01000021.
            Bacteria and source DNA available from Phytoengineering R&D Centre,
            LLC.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2016
            Assembly Method        :: SPAdes v. 3.8.0
            Expected Final Version :: no
            Genome Coverage        :: 44.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002921285.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:36:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,488
            CDSs (total)                      :: 4,393
            Genes (coding)                    :: 4,329
            CDSs (with protein)               :: 4,329
            Genes (RNA)                       :: 95
            rRNAs                             :: 8, 8, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1 (5S, 16S)
            partial rRNAs                     :: 7, 3 (16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 45 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 18 of 64
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4992613
                     /organism="Pectobacterium versatile"
                     /mol_type="genomic DNA"
                     /strain="PB69"
                     /isolation_source="Potato with the soft rot symptoms"
                     /db_xref="taxon:2488639"
                     /geo_loc_name="Russia: Moscow"
                     /lat_lon="55.75222 N 37.61556 E"
                     /collection_date="2012"
                     /collected_by="Alexander N. Ignatov"
WGS         PDVY01000001-PDVY01000021
WGS_SCAFLD  NZ_PDVY01000001-NZ_PDVY01000021
//
LOCUS       NZ_FPBH01000000      9892147 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paraburkholderia aspalathi strain LMG 27731, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FPBH00000000
VERSION     NZ_FPBH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05192563
            Assembly: GCF_900116445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paraburkholderia aspalathi
  ORGANISM  Paraburkholderia aspalathi
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FPBH00000000.1.
            The Paraburkholderia aspalathi whole genome shotgun (WGS) project
            has the project accession NZ_FPBH00000000.  This version of the
            project (01) has the accession number NZ_FPBH01000000, and consists
            of sequences FPBH01000001-FPBH01000103.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900116445.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:44:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,915
            CDSs (total)                      :: 8,854
            Genes (coding)                    :: 8,670
            CDSs (with protein)               :: 8,670
            Genes (RNA)                       :: 61
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 184
            CDSs (without protein)            :: 184
            Pseudo Genes (ambiguous residues) :: 0 of 184
            Pseudo Genes (frameshifted)       :: 59 of 184
            Pseudo Genes (incomplete)         :: 146 of 184
            Pseudo Genes (internal stop)      :: 19 of 184
            Pseudo Genes (multiple problems)  :: 37 of 184
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9892147
                     /organism="Paraburkholderia aspalathi"
                     /mol_type="genomic DNA"
                     /strain="LMG 27731"
                     /type_material="type strain of Burkholderia aspalathi"
                     /db_xref="taxon:1324617"
WGS         FPBH01000001-FPBH01000103
WGS_SCAFLD  NZ_FPBH01000001-NZ_FPBH01000103
//
LOCUS       NZ_QNQU01000000      6696916 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pedobacter miscanthi strain RS10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_QNQU00000000
VERSION     NZ_QNQU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09531634
            Assembly: GCF_003315595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pedobacter miscanthi
  ORGANISM  Pedobacter miscanthi
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
REFERENCE   1  (bases 1 to 6696916)
  AUTHORS   Zhang,Z.D. and Chen,Z.J.
  TITLE     A draft genome of a endophytic bacteria, a new species of
            Pedobacter
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6696916)
  AUTHORS   Zhang,Z.D. and Chen,Z.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-JUL-2018) Deparment of Food Science and Engineering,
            Hubei University of Arts and Science, No. 296 Longzhong Road,
            Xiangyang, Hubei 0086-441053, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QNQU00000000.1.
            The Pedobacter miscanthi whole genome shotgun (WGS) project has the
            project accession NZ_QNQU00000000.  This version of the project
            (01) has the accession number NZ_QNQU01000000, and consists of
            sequences QNQU01000001-QNQU01000100.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 1.05
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003315595.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:45:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,626
            CDSs (total)                      :: 5,565
            Genes (coding)                    :: 5,549
            CDSs (with protein)               :: 5,549
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2, 5 (16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 2 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6696916
                     /organism="Pedobacter miscanthi"
                     /mol_type="genomic DNA"
                     /strain="RS10"
                     /isolation_source="stem"
                     /host="Chinese silvergrass"
                     /type_material="type strain of Pedobacter miscanthi"
                     /db_xref="taxon:2259170"
                     /geo_loc_name="China"
                     /collection_date="2016-08-06"
WGS         QNQU01000001-QNQU01000100
WGS_SCAFLD  NZ_QNQU01000001-NZ_QNQU01000100
//
LOCUS       NZ_FUZW01000000     11048459 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paraburkholderia hospita strain BT03, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FUZW00000000
VERSION     NZ_FUZW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06266956
            Assembly: GCF_900167965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paraburkholderia hospita
  ORGANISM  Paraburkholderia hospita
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2017) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FUZW00000000.1.
            The Paraburkholderia hospita whole genome shotgun (WGS) project has
            the project accession NZ_FUZW00000000.  This version of the project
            (01) has the accession number NZ_FUZW01000000, and consists of
            sequences FUZW01000001-FUZW01000004.
            The organism was changed from 'Burkholderia sp. BT03' to
            'Paraburkholderia hospita' in March  2020.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_900167965.1
            Current Name        :: Paraburkholderia hospita
            Previous Name       :: Burkholderia sp. BT03
            Date Updated        :: 2020-03-09
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_900108355.1
            A1 Name             :: Paraburkholderia hospita
            A1 ANI              :: 98.17%
            A1 Query Coverage   :: 83.09%
            A1 Subject Coverage :: 81.98%
            Analysis 2 (A2)     :: Query vs. NO-TYPE genome for previous name
            A2 Genome (subject) :: no type
            A2 Name             :: Burkholderia sp. BT03
            A2 ANI              :: 0%
            A2 Query Coverage   :: 0%
            A2 Subject Coverage :: 0%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900167965.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:52:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 10,104
            CDSs (total)                      :: 10,014
            Genes (coding)                    :: 9,748
            CDSs (with protein)               :: 9,748
            Genes (RNA)                       :: 90
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 266
            CDSs (without protein)            :: 266
            Pseudo Genes (ambiguous residues) :: 0 of 266
            Pseudo Genes (frameshifted)       :: 104 of 266
            Pseudo Genes (incomplete)         :: 206 of 266
            Pseudo Genes (internal stop)      :: 37 of 266
            Pseudo Genes (multiple problems)  :: 70 of 266
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11048459
                     /organism="Paraburkholderia hospita"
                     /mol_type="genomic DNA"
                     /strain="BT03"
                     /db_xref="taxon:169430"
WGS         FUZW01000001-FUZW01000004
WGS_SCAFLD  NZ_FUZW01000001-NZ_FUZW01000004
//
LOCUS       NZ_NTZG01000000      5824617 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Priestia megaterium strain AFS002252, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NTZG00000000
VERSION     NZ_NTZG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07597266
            Assembly: GCF_002559335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Priestia.
REFERENCE   1  (bases 1 to 5824617)
  AUTHORS   Bleich,R.M., Kirk,G.J., Santa Maria,K.C., Allen,S.E., Farag,S.,
            Shank,E.A. and Bowers,A.
  CONSRTM   Agbiome Team Llc
  TITLE     Large-scale bioinformatics analysis of Bacillus genomes uncovers
            conserved roles of natural products in bacterial physiology
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5824617)
  AUTHORS   Bleich,R.M., Kirk,G.J., Santa Maria,K.C., Allen,S.E., Farag,S.,
            Shank,E.A. and Bowers,A.
  CONSRTM   Agbiome Team Llc
  TITLE     Direct Submission
  JOURNAL   Submitted (07-SEP-2017) Chemical Biology and Medicinal Chemistry,
            UNC Chapel Hill, 125 Mason Farm Rd., Chapel Hill, NC 17599, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NTZG00000000.1.
            The Priestia megaterium whole genome shotgun (WGS) project has the
            project accession NZ_NTZG00000000.  This version of the project
            (01) has the accession number NZ_NTZG01000000, and consists of
            sequences NTZG01000001-NTZG01000058.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC Assembly Cell v. 4.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 67.95x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002559335.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:44:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,102
            CDSs (total)                      :: 6,004
            Genes (coding)                    :: 5,909
            CDSs (with protein)               :: 5,909
            Genes (RNA)                       :: 98
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 86
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 96
            CDSs (without protein)            :: 95
            Pseudo Genes (ambiguous residues) :: 0 of 96
            Pseudo Genes (frameshifted)       :: 33 of 96
            Pseudo Genes (incomplete)         :: 62 of 96
            Pseudo Genes (internal stop)      :: 15 of 96
            Pseudo Genes (multiple problems)  :: 13 of 96
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5824617
                     /organism="Priestia megaterium"
                     /mol_type="genomic DNA"
                     /strain="AFS002252"
                     /isolation_source="soil"
                     /db_xref="taxon:1404"
                     /geo_loc_name="USA: IA"
                     /collection_date="2014-04-24"
                     /collected_by="AgBiome"
WGS         NTZG01000001-NTZG01000058
WGS_SCAFLD  NZ_NTZG01000001-NZ_NTZG01000058
//
LOCUS       NZ_PQGA01000000      6947286 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paraburkholderia eburnea strain JCM 18070, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PQGA00000000
VERSION     NZ_PQGA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06295901
            Assembly: GCF_002917095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paraburkholderia eburnea
  ORGANISM  Paraburkholderia eburnea
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (bases 1 to 6947286)
  AUTHORS   Whitman,W.
  TITLE     Genomic Encyclopedia of Type Strains, Phase III (KMG-III): the
            genomes of soil and plant-associated and newly described type
            strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6947286)
  AUTHORS   Whitman,W., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JAN-2018) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PQGA00000000.1.
            The Paraburkholderia eburnea whole genome shotgun (WGS) project has
            the project accession NZ_PQGA00000000.  This version of the project
            (01) has the accession number NZ_PQGA01000000, and consists of
            sequences PQGA01000001-PQGA01000058.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.6.2
            Expected Final Version :: No
            Genome Coverage        :: 149.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002917095.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:07:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,290
            CDSs (total)                      :: 6,224
            Genes (coding)                    :: 6,114
            CDSs (with protein)               :: 6,114
            Genes (RNA)                       :: 66
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 1 (5S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 110
            CDSs (without protein)            :: 110
            Pseudo Genes (ambiguous residues) :: 0 of 110
            Pseudo Genes (frameshifted)       :: 19 of 110
            Pseudo Genes (incomplete)         :: 105 of 110
            Pseudo Genes (internal stop)      :: 0 of 110
            Pseudo Genes (multiple problems)  :: 14 of 110
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6947286
                     /organism="Paraburkholderia eburnea"
                     /mol_type="genomic DNA"
                     /strain="JCM 18070"
                     /type_material="type strain of Burkholderia eburnea"
                     /db_xref="taxon:1189126"
WGS         PQGA01000001-PQGA01000058
WGS_SCAFLD  NZ_PQGA01000001-NZ_PQGA01000058
//
LOCUS       NZ_RCCP01000000      3428939 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Planococcus citreus strain DSM 20549, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RCCP00000000
VERSION     NZ_RCCP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09074769
            Assembly: GCF_003664125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Planococcus citreus
  ORGANISM  Planococcus citreus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (bases 1 to 3428939)
  AUTHORS   Goeker,M.
  TITLE     Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing
            the most valuable type-strain genomes for metagenomic binning,
            comparative biology and taxonomic classification
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3428939)
  AUTHORS   Goeker,M., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-OCT-2018) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RCCP00000000.1.
            The Planococcus citreus whole genome shotgun (WGS) project has the
            project accession NZ_RCCP00000000.  This version of the project
            (01) has the accession number NZ_RCCP01000000, and consists of
            sequences RCCP01000001-RCCP01000013.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 401.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003664125.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:57:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,477
            CDSs (total)                      :: 3,404
            Genes (coding)                    :: 3,389
            CDSs (with protein)               :: 3,389
            Genes (RNA)                       :: 73
            rRNAs                             :: 6, 8, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 7, 4 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 15
            CDSs (without protein)            :: 15
            Pseudo Genes (ambiguous residues) :: 0 of 15
            Pseudo Genes (frameshifted)       :: 5 of 15
            Pseudo Genes (incomplete)         :: 8 of 15
            Pseudo Genes (internal stop)      :: 2 of 15
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3428939
                     /organism="Planococcus citreus"
                     /mol_type="genomic DNA"
                     /strain="DSM 20549"
                     /culture_collection="DSM:20549"
                     /type_material="type strain of Planococcus citreus"
                     /db_xref="taxon:1373"
WGS         RCCP01000001-RCCP01000013
WGS_SCAFLD  NZ_RCCP01000001-NZ_RCCP01000013
//
LOCUS       NZ_AGUD01000000      5092500 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Patulibacter medicamentivorans strain I11, whole genome shotgun
            sequencing project.
ACCESSION   NZ_AGUD00000000
VERSION     NZ_AGUD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02391504
            Assembly: GCF_000240225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Patulibacter medicamentivorans
  ORGANISM  Patulibacter medicamentivorans
            Bacteria; Bacillati; Actinomycetota; Thermoleophilia;
            Solirubrobacterales; Patulibacteraceae; Patulibacter.
REFERENCE   1  (bases 1 to 5092500)
  AUTHORS   Almeida,B., Kjeldal,H., Lolas,I., Knudsen,A.D., Carvalho,G.,
            Nielsen,K.L., Barreto Crespo,M.T., Stensballe,A. and Nielsen,J.L.
  TITLE     Quantitative proteomic analysis of ibuprofen-degrading Patulibacter
            sp. strain I11
  JOURNAL   Biodegradation 24 (5), 615-630 (2013)
   PUBMED   23212173
REFERENCE   2  (bases 1 to 5092500)
  AUTHORS   Almeida,B., Lolas,I., Kristiansen,R., Soenderkaer,M., Nielsen,K.L.
            and Nielsen,J.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-DEC-2011) Dept. of Biotechnology, Chemistry and
            Environmental Engineering, Aalborg University, Sohngaardsholmsvej
            49, Aalborg DK-9000, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AGUD00000000.1.
            The Patulibacter medicamentivorans whole genome shotgun (WGS)
            project has the project accession NZ_AGUD00000000.  This version of
            the project (01) has the accession number NZ_AGUD01000000, and
            consists of sequences AGUD01000001-AGUD01000353.
            Source DNA and Bacteria are available from Jeppe Lund Nielsen Dept.
            of Biotechnology, Chemistry and Environmental Engineering Aalborg
            University, Sohngaardsholmsvej 49, DK-9000 Aalborg, Denmark.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 01-MAY-2011
            Assembly Method       :: CLC Genomics Workbench v. 4.5.1; ABySS v.
                                     1.2.7
            Genome Coverage       :: 2348x
            Sequencing Technology :: Illumina GA IIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000240225.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:47:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,770
            CDSs (total)                      :: 4,719
            Genes (coding)                    :: 4,592
            CDSs (with protein)               :: 4,592
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 127
            CDSs (without protein)            :: 127
            Pseudo Genes (ambiguous residues) :: 0 of 127
            Pseudo Genes (frameshifted)       :: 1 of 127
            Pseudo Genes (incomplete)         :: 127 of 127
            Pseudo Genes (internal stop)      :: 0 of 127
            Pseudo Genes (multiple problems)  :: 1 of 127
            CRISPR Arrays                     :: 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5092500
                     /organism="Patulibacter medicamentivorans"
                     /mol_type="genomic DNA"
                     /strain="I11"
                     /isolation_source="activated sludge with ibuprofen
                     degradation capacity"
                     /type_material="type strain of Patulibacter
                     medicamentivorans"
                     /db_xref="taxon:1097667"
WGS         AGUD01000001-AGUD01000353
WGS_SCAFLD  NZ_AGUD01000001-NZ_AGUD01000353
//
LOCUS       NZ_QHKS01000000      8405011 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paraburkholderia lacunae strain S27, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QHKS00000000
VERSION     NZ_QHKS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09259632
            Assembly: GCF_003353175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paraburkholderia lacunae
  ORGANISM  Paraburkholderia lacunae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (bases 1 to 8405011)
  AUTHORS   Feng,T. and Jeon,C.O.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAY-2018) Life Science, Chung-Ang University, 84
            Heukseok-Ro, Dongjak-Gu, Seoul 06974, South Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QHKS00000000.1.
            The Paraburkholderia lacunae whole genome shotgun (WGS) project has
            the project accession NZ_QHKS00000000.  This version of the project
            (01) has the accession number NZ_QHKS01000000, and consists of
            sequences QHKS01000001-QHKS01000096.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 28-MAR-2018
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 11.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003353175.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:27:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,739
            CDSs (total)                      :: 7,680
            Genes (coding)                    :: 7,362
            CDSs (with protein)               :: 7,362
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 318
            CDSs (without protein)            :: 318
            Pseudo Genes (ambiguous residues) :: 0 of 318
            Pseudo Genes (frameshifted)       :: 73 of 318
            Pseudo Genes (incomplete)         :: 278 of 318
            Pseudo Genes (internal stop)      :: 25 of 318
            Pseudo Genes (multiple problems)  :: 55 of 318
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8405011
                     /organism="Paraburkholderia lacunae"
                     /mol_type="genomic DNA"
                     /strain="S27"
                     /isolation_source="soil"
                     /type_material="type strain of Paraburkholderia lacunae"
                     /db_xref="taxon:2211104"
                     /geo_loc_name="South Korea"
                     /collection_date="2017-09-20"
WGS         QHKS01000001-QHKS01000096
WGS_SCAFLD  NZ_QHKS01000001-NZ_QHKS01000096
//
LOCUS       NZ_MAPQ01000000      2235993 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pasteurella multocida strain C51-17, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MAPQ00000000
VERSION     NZ_MAPQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05281838
            Assembly: GCF_004286955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pasteurella multocida
  ORGANISM  Pasteurella multocida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Pasteurella.
REFERENCE   1  (bases 1 to 2235993)
  AUTHORS   Cao,P., Guo,D., Liu,J., Jiang,Q., Xu,Z. and Qu,L.
  TITLE     Genome-Wide Analyses Reveal Genes Subject to Positive Selection in
            Pasteurella multocida
  JOURNAL   Front Microbiol 8, 961 (2017)
   PUBMED   28611758
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235993)
  AUTHORS   Guo,D., Cao,P. and Qu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JUN-2016) Division of Zoonosis, Harbin Veterinary
            Research Institute, 427 Maduan Street, Nanggang District, Harbin,
            Heilongjiang 150001, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MAPQ00000000.1.
            The Pasteurella multocida whole genome shotgun (WGS) project has
            the project accession NZ_MAPQ00000000.  This version of the project
            (01) has the accession number NZ_MAPQ01000000, and consists of
            sequences MAPQ01000001-MAPQ01000015.
            Annotated using prokka 1.12-beta from
            https://github.com/tseemann/prokka.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. v2.04
            Genome Coverage       :: 510.0x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004286955.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:13:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,114
            CDSs (total)                      :: 2,060
            Genes (coding)                    :: 2,046
            CDSs (with protein)               :: 2,046
            Genes (RNA)                       :: 54
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 14
            CDSs (without protein)            :: 14
            Pseudo Genes (ambiguous residues) :: 0 of 14
            Pseudo Genes (frameshifted)       :: 8 of 14
            Pseudo Genes (incomplete)         :: 3 of 14
            Pseudo Genes (internal stop)      :: 3 of 14
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235993
                     /organism="Pasteurella multocida"
                     /mol_type="genomic DNA"
                     /strain="C51-17"
                     /host="rabbit"
                     /db_xref="taxon:747"
                     /geo_loc_name="China: Jiangsu"
                     /collection_date="1989"
WGS         MAPQ01000001-MAPQ01000015
WGS_SCAFLD  NZ_MAPQ01000001-NZ_MAPQ01000015
//
LOCUS       NZ_VHJA01000000      4660432 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea deleyi strain LMG 24200, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VHJA00000000
VERSION     NZ_VHJA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12097162
            Assembly: GCF_006494415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea deleyi
  ORGANISM  Pantoea deleyi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea.
REFERENCE   1  (bases 1 to 4660432)
  AUTHORS   Tambong,J.T.
  TITLE     Taxogenomics and systematics of the genus Pantoea
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4660432)
  AUTHORS   Tambong,J.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-JUN-2019) Agriculture and Agri-Food Canada, Ottawa
            Research and Development Center, 960 Carling Avenue, Ottawa,
            Ontario K1A 0C6, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VHJA00000000.1.
            The Pantoea deleyi whole genome shotgun (WGS) project has the
            project accession NZ_VHJA00000000.  This version of the project
            (01) has the accession number NZ_VHJA01000000, and consists of
            sequences VHJA01000001-VHJA01000086.
            Bacteria and source DNA available from James T. Tambong, Ottawa
            Research and Development Center, 960 Carling Avenue, Ottawa, ON.
            K1A 0C6.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: DEC-2018
            Assembly Method        :: ABySS v. 1.5.2
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 136.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006494415.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:40:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,386
            CDSs (total)                      :: 4,267
            Genes (coding)                    :: 4,207
            CDSs (with protein)               :: 4,207
            Genes (RNA)                       :: 119
            rRNAs                             :: 11, 7, 14 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 2, 4 (5S, 16S, 23S)
            partial rRNAs                     :: 5, 5, 10 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 21 of 60
            Pseudo Genes (incomplete)         :: 44 of 60
            Pseudo Genes (internal stop)      :: 12 of 60
            Pseudo Genes (multiple problems)  :: 13 of 60
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4660432
                     /organism="Pantoea deleyi"
                     /mol_type="genomic DNA"
                     /strain="LMG 24200"
                     /host="Eucalyptus"
                     /type_material="type strain of Pantoea deleyi"
                     /db_xref="taxon:470932"
                     /geo_loc_name="Uganda"
                     /collection_date="2007"
WGS         VHJA01000001-VHJA01000086
WGS_SCAFLD  NZ_VHJA01000001-NZ_VHJA01000086
//
LOCUS       NZ_RCXY01000000      5352199 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Phocaeicola vulgatus strain am_0224, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RCXY00000000
VERSION     NZ_RCXY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10239575
            Assembly: GCF_004167625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Phocaeicola vulgatus
  ORGANISM  Phocaeicola vulgatus
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Bacteroidaceae; Phocaeicola.
REFERENCE   1  (bases 1 to 5352199)
  AUTHORS   Jiang,X., Hall,A.B., Arthur,T.D., Plichta,D.R., Covington,C.T.,
            Poyet,M., Crothers,J., Moses,P.L., Tolonen,A.C., Vlamakis,H.,
            Alm,E.J. and Xavier,R.J.
  TITLE     Invertible promoters mediate bacterial phase variation, antibiotic
            resistance, and host adaptation in the gut
  JOURNAL   Science 363 (6423), 181-187 (2019)
   PUBMED   30630933
REFERENCE   2  (bases 1 to 5352199)
  AUTHORS   Jiang,X., Hall,B., Alm,E. and Xavier,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-OCT-2018) Infectious Disease and Microbiome (IDM)
            Program, Broad Institute, 415 Main St, Cambridge, MA 02142, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RCXY00000000.1.
            The Phocaeicola vulgatus whole genome shotgun (WGS) project has the
            project accession NZ_RCXY00000000.  This version of the project
            (01) has the accession number NZ_RCXY01000000, and consists of
            sequences RCXY01000001-RCXY01000100.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 69.5266x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004167625.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:14:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,584
            CDSs (total)                      :: 4,507
            Genes (coding)                    :: 4,349
            CDSs (with protein)               :: 4,349
            Genes (RNA)                       :: 77
            rRNAs                             :: 3, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 69
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 158
            CDSs (without protein)            :: 158
            Pseudo Genes (ambiguous residues) :: 0 of 158
            Pseudo Genes (frameshifted)       :: 50 of 158
            Pseudo Genes (incomplete)         :: 109 of 158
            Pseudo Genes (internal stop)      :: 22 of 158
            Pseudo Genes (multiple problems)  :: 19 of 158
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5352199
                     /organism="Phocaeicola vulgatus"
                     /mol_type="genomic DNA"
                     /strain="am_0224"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:821"
                     /geo_loc_name="USA: Cambridge"
                     /collection_date="2015-01"
WGS         RCXY01000001-RCXY01000100
WGS_SCAFLD  NZ_RCXY01000001-NZ_RCXY01000100
//
LOCUS       NZ_VIJZ01000000      5509884 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paenibacillus ottowii strain MS2379, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VIJZ00000000
VERSION     NZ_VIJZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12136857
            Assembly: GCF_006874425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paenibacillus ottowii
  ORGANISM  Paenibacillus ottowii
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (bases 1 to 5509884)
  AUTHORS   Velazquez,L.F., Rajbanshi,S., Guan,S., Hinchee,M. and Welsh,A.
  TITLE     Paenibacillus ottowii sp. nov. isolated from a fermentation system
            processing bovine manure
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5509884)
  AUTHORS   Welsh,A. and Velazquez,L.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-JUL-2019) Microbiology, Agricen Sciences, 801 Hwy 377
            South, Pilot Point, TX 76258, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VIJZ00000000.1.
            The Paenibacillus ottowii whole genome shotgun (WGS) project has
            the project accession NZ_VIJZ00000000.  This version of the project
            (01) has the accession number NZ_VIJZ01000000, and consists of
            sequences VIJZ01000001-VIJZ01000043.
            Bacteria and source DNA available from DSMZ, ATCC.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 11-JUN-2019
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 165.52x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006874425.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:41:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,211
            CDSs (total)                      :: 5,107
            Genes (coding)                    :: 5,013
            CDSs (with protein)               :: 5,013
            Genes (RNA)                       :: 104
            rRNAs                             :: 8, 13, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 4, 13, 5 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 94
            CDSs (without protein)            :: 94
            Pseudo Genes (ambiguous residues) :: 0 of 94
            Pseudo Genes (frameshifted)       :: 38 of 94
            Pseudo Genes (incomplete)         :: 59 of 94
            Pseudo Genes (internal stop)      :: 21 of 94
            Pseudo Genes (multiple problems)  :: 20 of 94
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5509884
                     /organism="Paenibacillus ottowii"
                     /mol_type="genomic DNA"
                     /strain="MS2379"
                     /isolation_source="pasteurized solution sample from a
                     predominantly anaerobic fermentation system processing
                     bovine manure"
                     /culture_collection="ATCC:TSD-165"
                     /culture_collection="DSM:107750"
                     /type_material="type strain of Paenibacillus ottowii"
                     /db_xref="taxon:2315729"
                     /geo_loc_name="USA: Pilot Point, Texas"
                     /lat_lon="33.3965 N 96.9606 W"
                     /collection_date="2013-10-25"
WGS         VIJZ01000001-VIJZ01000043
WGS_SCAFLD  NZ_VIJZ01000001-NZ_VIJZ01000043
//
LOCUS       NZ_QJUJ01000000      5570084 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Phytopseudomonas daroniae strain P18A, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QJUJ00000000
VERSION     NZ_QJUJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09280084
            Assembly: GCF_004327275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Phytopseudomonas daroniae
  ORGANISM  Phytopseudomonas daroniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Phytopseudomonas.
REFERENCE   1  (bases 1 to 5570084)
  AUTHORS   Bueno-Gonzalez,V. and Brady,C.
  TITLE     Three novel Pseudomonas species isolated from symptomatic oak
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5570084)
  AUTHORS   Bueno-Gonzalez,V. and Brady,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-JUN-2018) DAS, University of the West of England,
            Coldharbour Lane, Bristol BS16 1QY, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QJUJ00000000.1.
            The Phytopseudomonas daroniae whole genome shotgun (WGS) project
            has the project accession NZ_QJUJ00000000.  This version of the
            project (01) has the accession number NZ_QJUJ01000000, and consists
            of sequences QJUJ01000001-QJUJ01000025.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: MAY-2018
            Assembly Method        :: SPAdes v. 3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004327275.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,148
            CDSs (total)                      :: 5,079
            Genes (coding)                    :: 5,002
            CDSs (with protein)               :: 5,002
            Genes (RNA)                       :: 69
            rRNAs                             :: 4, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 23S)
            partial rRNAs                     :: 1, 2, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 19 of 77
            Pseudo Genes (incomplete)         :: 65 of 77
            Pseudo Genes (internal stop)      :: 8 of 77
            Pseudo Genes (multiple problems)  :: 14 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5570084
                     /organism="Phytopseudomonas daroniae"
                     /mol_type="genomic DNA"
                     /strain="P18A"
                     /isolation_source="Larval galleries created by Agrilus
                     biguttatus"
                     /host="Quercus robur"
                     /db_xref="taxon:2487519"
                     /geo_loc_name="United Kingdom: Bisham Woods"
                     /collection_date="2012-01-27"
                     /collected_by="Sandra Denman"
                     /identified_by="Victoria Bueno-Gonzalez"
WGS         QJUJ01000001-QJUJ01000025
WGS_SCAFLD  NZ_QJUJ01000001-NZ_QJUJ01000025
//
LOCUS       NZ_QJUM01000000      5736819 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Phytopseudomonas dryadis strain P26B, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QJUM00000000
VERSION     NZ_QJUM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09280090
            Assembly: GCF_004327355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Phytopseudomonas dryadis
  ORGANISM  Phytopseudomonas dryadis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Phytopseudomonas.
REFERENCE   1  (bases 1 to 5736819)
  AUTHORS   Bueno-Gonzalez,V. and Brady,C.
  TITLE     Three novel Pseudomonas species isolated from symptomatic oak
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5736819)
  AUTHORS   Bueno-Gonzalez,V. and Brady,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JUN-2018) DAS, University of the West of England,
            Coldharbour Lane, Bristol BS16 1QY, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QJUM00000000.1.
            The Phytopseudomonas dryadis whole genome shotgun (WGS) project has
            the project accession NZ_QJUM00000000.  This version of the project
            (01) has the accession number NZ_QJUM01000000, and consists of
            sequences QJUM01000001-QJUM01000088.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: MAY-2018
            Assembly Method        :: SPAdes v. 3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004327355.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:44:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,059
            CDSs (total)                      :: 4,994
            Genes (coding)                    :: 4,910
            CDSs (with protein)               :: 4,910
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 84
            CDSs (without protein)            :: 84
            Pseudo Genes (ambiguous residues) :: 0 of 84
            Pseudo Genes (frameshifted)       :: 26 of 84
            Pseudo Genes (incomplete)         :: 67 of 84
            Pseudo Genes (internal stop)      :: 6 of 84
            Pseudo Genes (multiple problems)  :: 13 of 84
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5736819
                     /organism="Phytopseudomonas dryadis"
                     /mol_type="genomic DNA"
                     /strain="P26B"
                     /isolation_source="Larval galleries created by Agrilus
                     biguttatus"
                     /host="Quercus robur"
                     /db_xref="taxon:2487520"
                     /geo_loc_name="United Kingdom: Great Monk Wood"
                     /collection_date="2013-02-06"
                     /collected_by="Sandra Denman"
                     /identified_by="Victoria Bueno-Gonzalez"
WGS         QJUM01000001-QJUM01000088
WGS_SCAFLD  NZ_QJUM01000001-NZ_QJUM01000088
//
LOCUS       NZ_WMIH01000000      4334674 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paracoccus shanxieyensis strain DK398, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WMIH00000000
VERSION     NZ_WMIH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13324935
            Assembly: GCF_009711215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paracoccus shanxieyensis
  ORGANISM  Paracoccus shanxieyensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paracoccus.
REFERENCE   1  (bases 1 to 4334674)
  AUTHORS   Dong,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2019) National Institute for communicable disease
            control and prevention, Chinese center for disease control and
            prevention, Changping District Changbai Road, No. 155, Beijing
            102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WMIH00000000.1.
            The Paracoccus shanxieyensis whole genome shotgun (WGS) project has
            the project accession NZ_WMIH00000000.  This version of the project
            (01) has the accession number NZ_WMIH01000000, and consists of
            sequences WMIH01000001-WMIH01000074.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAP denovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 233x
            Sequencing Technology  :: Illumina HiSeq PE150
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009711215.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:51:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,280
            CDSs (total)                      :: 4,228
            Genes (coding)                    :: 4,171
            CDSs (with protein)               :: 4,171
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 10 of 57
            Pseudo Genes (incomplete)         :: 53 of 57
            Pseudo Genes (internal stop)      :: 3 of 57
            Pseudo Genes (multiple problems)  :: 8 of 57
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4334674
                     /organism="Paracoccus shanxieyensis"
                     /mol_type="genomic DNA"
                     /strain="DK398"
                     /isolation_source="Ocular surface"
                     /host="no collected"
                     /type_material="type strain of Paracoccus shanxieyensis"
                     /db_xref="taxon:2675752"
                     /geo_loc_name="China: Changping District, Beijing"
                     /collection_date="2019"
WGS         WMIH01000001-WMIH01000074
WGS_SCAFLD  NZ_WMIH01000001-NZ_WMIH01000074
//
LOCUS       NZ_VDDD01000000      3673154 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paracoccus marcusii strain CGMCC 1.8602, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VDDD00000000
VERSION     NZ_VDDD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11928014
            Assembly: GCF_006151785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paracoccus marcusii
  ORGANISM  Paracoccus marcusii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paracoccus.
REFERENCE   1  (bases 1 to 3673154)
  AUTHORS   Li,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-JUN-2019) National Institue for Communicable Disease
            Control and Prevention, Chinese Center for Disease Control and
            Prevention, Changping District Changbai Road, No. 155, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VDDD00000000.1.
            The Paracoccus marcusii whole genome shotgun (WGS) project has the
            project accession NZ_VDDD00000000.  This version of the project
            (01) has the accession number NZ_VDDD01000000, and consists of
            sequences VDDD01000001-VDDD01000297.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 4.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006151785.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:48:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,857
            CDSs (total)                      :: 3,806
            Genes (coding)                    :: 3,685
            CDSs (with protein)               :: 3,685
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 121
            Pseudo Genes (ambiguous residues) :: 0 of 121
            Pseudo Genes (frameshifted)       :: 23 of 121
            Pseudo Genes (incomplete)         :: 109 of 121
            Pseudo Genes (internal stop)      :: 12 of 121
            Pseudo Genes (multiple problems)  :: 18 of 121
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3673154
                     /organism="Paracoccus marcusii"
                     /mol_type="genomic DNA"
                     /strain="CGMCC 1.8602"
                     /isolation_source="sea water"
                     /db_xref="taxon:59779"
                     /geo_loc_name="South Korea: Haeundase Coast"
                     /collection_date="2004"
WGS         VDDD01000001-VDDD01000297
WGS_SCAFLD  NZ_VDDD01000001-NZ_VDDD01000297
//
LOCUS       NZ_PPVU01000000      2353938 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pasteurella multocida strain HNA15, whole genome shotgun sequencing
            project.
ACCESSION   NZ_PPVU00000000
VERSION     NZ_PPVU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08386600
            Assembly: GCF_013013125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pasteurella multocida
  ORGANISM  Pasteurella multocida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Pasteurella.
REFERENCE   1  (bases 1 to 2353938)
  AUTHORS   Peng,Z., Liang,W., Wang,F., Xu,Z., Xie,Z., Lian,Z., Hua,L.,
            Zhou,R., Chen,H. and Wu,B.
  TITLE     Genetic and Phylogenetic Characteristics of Pasteurella multocida
            Isolates From Different Host Species
  JOURNAL   Front Microbiol 9, 1408 (2018)
   PUBMED   29997608
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2353938)
  AUTHORS   Peng,Z. and Wu,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JAN-2018) College of Veterinary Medicine, Huazhong
            Agricultural University, No. 1 Shizishan Street, Wuhan, Hubei
            430070, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PPVU00000000.1.
            The Pasteurella multocida whole genome shotgun (WGS) project has
            the project accession NZ_PPVU00000000.  This version of the project
            (01) has the accession number NZ_PPVU01000000, and consists of
            sequences PPVU01000001-PPVU01000029.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Prof. Bin Wu lab at Huazhong
            Agricultural University in China.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 675.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013013125.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:55:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,280
            CDSs (total)                      :: 2,219
            Genes (coding)                    :: 2,190
            CDSs (with protein)               :: 2,190
            Genes (RNA)                       :: 61
            rRNAs                             :: 5, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 9 of 29
            Pseudo Genes (incomplete)         :: 15 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 1 of 29
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2353938
                     /organism="Pasteurella multocida"
                     /mol_type="genomic DNA"
                     /strain="HNA15"
                     /isolation_source="Tissue sample"
                     /host="pig"
                     /db_xref="taxon:747"
                     /geo_loc_name="China"
                     /lat_lon="29.01 N 108.21 E"
                     /collection_date="2017-12"
WGS         PPVU01000001-PPVU01000029
WGS_SCAFLD  NZ_PPVU01000001-NZ_PPVU01000029
//
LOCUS       NZ_WBJX01000000      3912908 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudoclavibacter terrae strain THG-MD12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WBJX00000000
VERSION     NZ_WBJX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12810922
            Assembly: GCF_008831075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudoclavibacter terrae
  ORGANISM  Pseudoclavibacter terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (bases 1 to 3912908)
  AUTHORS   Li,Y.
  TITLE     Phylogeny of genus Pseudoclavibacter and closely related genus
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3912908)
  AUTHORS   Li,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2019) Forest Pathology, Research Institute of
            Forest Ecology Environment and Protection, No. 1 Dongxiaofu,
            Haidian District, Beijing 100091, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WBJX00000000.1.
            The Pseudoclavibacter terrae whole genome shotgun (WGS) project has
            the project accession NZ_WBJX00000000.  This version of the project
            (01) has the accession number NZ_WBJX01000000, and consists of
            sequences WBJX01000001-WBJX01000011.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_008831075.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:48:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,608
            CDSs (total)                      :: 3,556
            Genes (coding)                    :: 3,544
            CDSs (with protein)               :: 3,544
            Genes (RNA)                       :: 52
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 10 of 12
            Pseudo Genes (internal stop)      :: 1 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3912908
                     /organism="Pseudoclavibacter terrae"
                     /mol_type="genomic DNA"
                     /strain="THG-MD12"
                     /isolation_source="soil"
                     /type_material="type strain of Pseudoclavibacter terrae"
                     /db_xref="taxon:1530195"
                     /geo_loc_name="China"
                     /collection_date="2012"
WGS         WBJX01000001-WBJX01000011
WGS_SCAFLD  NZ_WBJX01000001-NZ_WBJX01000011
//
LOCUS       NZ_WCIC01000000      5232570 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Phocaeicola vulgatus strain CFPLTA002_1B, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WCIC00000000
VERSION     NZ_WCIC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12414689
            Assembly: GCF_009025805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Phocaeicola vulgatus
  ORGANISM  Phocaeicola vulgatus
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Bacteroidaceae; Phocaeicola.
REFERENCE   1  (bases 1 to 5232570)
  AUTHORS   Cengher,L., O'Toole,G.A., Price,C.E., Ruoff,K.L. and Valls,R.A.
  TITLE     Genome Sequencing and Assembly of iSURF_6
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5232570)
  AUTHORS   Cengher,L., O'Toole,G.A., Price,C.E., Ruoff,K.L. and Valls,R.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-OCT-2019) Microbiology, Geisel School of Medicine @
            Dartmouth, 74 North College Street, Hanover, NH 03755, United
            States Minor Outlying Islands
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WCIC00000000.1.
            The Phocaeicola vulgatus whole genome shotgun (WGS) project has the
            project accession NZ_WCIC00000000.  This version of the project
            (01) has the accession number NZ_WCIC01000000, and consists of
            sequences WCIC01000001-WCIC01000123.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from George O'Toole, Dartmouth
            College.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: OCT-2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 172.92x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009025805.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:05:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,406
            CDSs (total)                      :: 4,324
            Genes (coding)                    :: 4,168
            CDSs (with protein)               :: 4,168
            Genes (RNA)                       :: 82
            rRNAs                             :: 8, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 1 (5S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 156
            CDSs (without protein)            :: 156
            Pseudo Genes (ambiguous residues) :: 0 of 156
            Pseudo Genes (frameshifted)       :: 47 of 156
            Pseudo Genes (incomplete)         :: 109 of 156
            Pseudo Genes (internal stop)      :: 27 of 156
            Pseudo Genes (multiple problems)  :: 21 of 156
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5232570
                     /organism="Phocaeicola vulgatus"
                     /mol_type="genomic DNA"
                     /strain="CFPLTA002_1B"
                     /host="Homo sapiens"
                     /db_xref="taxon:821"
                     /geo_loc_name="USA: NH, DHMC"
                     /collection_date="2018"
                     /collected_by="Kathryn Ruoff"
WGS         WCIC01000001-WCIC01000123
WGS_SCAFLD  NZ_WCIC01000001-NZ_WCIC01000123
//
LOCUS       NZ_PPVT01000000      2354730 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pasteurella multocida strain HNA14, whole genome shotgun sequencing
            project.
ACCESSION   NZ_PPVT00000000
VERSION     NZ_PPVT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08386599
            Assembly: GCF_013013075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pasteurella multocida
  ORGANISM  Pasteurella multocida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Pasteurella.
REFERENCE   1  (bases 1 to 2354730)
  AUTHORS   Peng,Z., Liang,W., Wang,F., Xu,Z., Xie,Z., Lian,Z., Hua,L.,
            Zhou,R., Chen,H. and Wu,B.
  TITLE     Genetic and Phylogenetic Characteristics of Pasteurella multocida
            Isolates From Different Host Species
  JOURNAL   Front Microbiol 9, 1408 (2018)
   PUBMED   29997608
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2354730)
  AUTHORS   Peng,Z. and Wu,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JAN-2018) College of Veterinary Medicine, Huazhong
            Agricultural University, No. 1 Shizishan Street, Wuhan, Hubei
            430070, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PPVT00000000.1.
            The Pasteurella multocida whole genome shotgun (WGS) project has
            the project accession NZ_PPVT00000000.  This version of the project
            (01) has the accession number NZ_PPVT01000000, and consists of
            sequences PPVT01000001-PPVT01000030.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Prof. Bin Wu lab at Huazhong
            Agricultural University in China.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 366.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013013075.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:07:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,279
            CDSs (total)                      :: 2,218
            Genes (coding)                    :: 2,189
            CDSs (with protein)               :: 2,189
            Genes (RNA)                       :: 61
            rRNAs                             :: 5, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 9 of 29
            Pseudo Genes (incomplete)         :: 15 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 1 of 29
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2354730
                     /organism="Pasteurella multocida"
                     /mol_type="genomic DNA"
                     /strain="HNA14"
                     /isolation_source="Tissue sample"
                     /host="pig"
                     /db_xref="taxon:747"
                     /geo_loc_name="China"
                     /lat_lon="29.01 N 108.21 E"
                     /collection_date="2017-12"
WGS         PPVT01000001-PPVT01000030
WGS_SCAFLD  NZ_PPVT01000001-NZ_PPVT01000030
//
LOCUS       NZ_QEOB01000000     10195927 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paraburkholderia unamae strain SCZa-39, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QEOB00000000
VERSION     NZ_QEOB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08769245
            Assembly: GCF_003096875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paraburkholderia unamae
  ORGANISM  Paraburkholderia unamae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (bases 1 to 10195927)
  AUTHORS   Whitman,W.
  TITLE     Genomic Encyclopedia of Type Strains, Phase IV (KMG-V): Genome
            sequencing to study the core and pangenomes of soil and
            plant-associated prokaryotes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 10195927)
  AUTHORS   Whitman,W., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAY-2018) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QEOB00000000.1.
            The Paraburkholderia unamae whole genome shotgun (WGS) project has
            the project accession NZ_QEOB00000000.  This version of the project
            (01) has the accession number NZ_QEOB01000000, and consists of
            sequences QEOB01000001-QEOB01000077.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10.1
            Expected Final Version :: No
            Genome Coverage        :: 86.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003096875.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:59:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 9,315
            CDSs (total)                      :: 9,240
            Genes (coding)                    :: 9,116
            CDSs (with protein)               :: 9,116
            Genes (RNA)                       :: 75
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 65
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 124
            CDSs (without protein)            :: 124
            Pseudo Genes (ambiguous residues) :: 0 of 124
            Pseudo Genes (frameshifted)       :: 27 of 124
            Pseudo Genes (incomplete)         :: 104 of 124
            Pseudo Genes (internal stop)      :: 13 of 124
            Pseudo Genes (multiple problems)  :: 16 of 124
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10195927
                     /organism="Paraburkholderia unamae"
                     /mol_type="genomic DNA"
                     /strain="SCZa-39"
                     /db_xref="taxon:219649"
WGS         QEOB01000001-QEOB01000077
WGS_SCAFLD  NZ_QEOB01000001-NZ_QEOB01000077
//
LOCUS       NZ_WMII01000000      4332798 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paracoccus shanxieyensis strain DK608, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WMII00000000
VERSION     NZ_WMII00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13324937
            Assembly: GCF_009711265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paracoccus shanxieyensis
  ORGANISM  Paracoccus shanxieyensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paracoccus.
REFERENCE   1  (bases 1 to 4332798)
  AUTHORS   Dong,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2019) National Institute for Communicable Disease
            Control and Prevention, Chinese Center for Disease Control and
            Prevention, Changping District Changbai Road, No. 155, Beijing
            102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WMII00000000.1.
            The Paracoccus shanxieyensis whole genome shotgun (WGS) project has
            the project accession NZ_WMII00000000.  This version of the project
            (01) has the accession number NZ_WMII01000000, and consists of
            sequences WMII01000001-WMII01000070.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAP denovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 232x
            Sequencing Technology  :: Illumina HiSeq PE150
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009711265.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:59:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,283
            CDSs (total)                      :: 4,232
            Genes (coding)                    :: 4,174
            CDSs (with protein)               :: 4,174
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 58
            CDSs (without protein)            :: 58
            Pseudo Genes (ambiguous residues) :: 0 of 58
            Pseudo Genes (frameshifted)       :: 10 of 58
            Pseudo Genes (incomplete)         :: 54 of 58
            Pseudo Genes (internal stop)      :: 3 of 58
            Pseudo Genes (multiple problems)  :: 8 of 58
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4332798
                     /organism="Paracoccus shanxieyensis"
                     /mol_type="genomic DNA"
                     /strain="DK608"
                     /isolation_source="Ocular surface"
                     /host="no collected"
                     /db_xref="taxon:2675752"
                     /geo_loc_name="China: Changping District, Beijing"
                     /collection_date="2019"
WGS         WMII01000001-WMII01000070
WGS_SCAFLD  NZ_WMII01000001-NZ_WMII01000070
//
LOCUS       NZ_JABUHS010000000   6791454 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas allii strain MAFF 301512, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABUHS000000000
VERSION     NZ_JABUHS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15051844
            Assembly: GCF_013391985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas allii
  ORGANISM  Pseudomonas allii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6791454)
  AUTHORS   Sawada,H., Fujikawa,T. and Satou,M.
  TITLE     Dismantling and reorganizing Pseudomonas marginalis sensu#lato
  JOURNAL   Plant Pathol 72 (4), 654-666 (2023)
  REMARK    DOI: 10.1111/ppa.13690
REFERENCE   2  (bases 1 to 6791454)
  AUTHORS   Sawada,H., Fujikawa,T., Tsuji,M. and Satou,M.
  TITLE     Pseudomonas allii sp. nov., a pathogen causing soft rot of onion in
            Japan
  JOURNAL   Int J Syst Evol Microbiol 71 (1) (2021)
   PUBMED   33270007
REFERENCE   3  (bases 1 to 6791454)
  AUTHORS   Fujikawa,T. and Sawada,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAY-2020) Institute of Fruit Tree and Tea Science,
            National Agriculture and Food Research Organization (NARO),
            Fujimoto 2-1, Tsukuba, Ibaraki 305-8605, Japan, Tsukuba, Ibaraki
            305-8605, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABUHS000000000.1.
            The Pseudomonas allii whole genome shotgun (WGS) project has the
            project accession NZ_JABUHS000000000.  This version of the project
            (01) has the accession number NZ_JABUHS010000000, and consists of
            sequences JABUHS010000001-JABUHS010000502.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from NARO Genebank.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: MAY-2020
            Assembly Method        :: CLC Genomics Workbench v. 20
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 59.34x
            Sequencing Technology  :: Ion Torrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013391985.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:37:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,475
            CDSs (total)                      :: 6,428
            Genes (coding)                    :: 5,693
            CDSs (with protein)               :: 5,693
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 735
            CDSs (without protein)            :: 735
            Pseudo Genes (ambiguous residues) :: 0 of 735
            Pseudo Genes (frameshifted)       :: 607 of 735
            Pseudo Genes (incomplete)         :: 146 of 735
            Pseudo Genes (internal stop)      :: 13 of 735
            Pseudo Genes (multiple problems)  :: 30 of 735
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6791454
                     /organism="Pseudomonas allii"
                     /mol_type="genomic DNA"
                     /strain="MAFF 301512"
                     /host="onion"
                     /db_xref="taxon:2740531"
                     /geo_loc_name="Japan: Shizuoka"
                     /collection_date="1980"
WGS         JABUHS010000001-JABUHS010000502
WGS_SCAFLD  NZ_JABUHS010000001-NZ_JABUHS010000502
//
LOCUS       NZ_JAALFR010000000   4687373 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea anthophila strain EKM101A, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAALFR000000000
VERSION     NZ_JAALFR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14070752
            Assembly: GCF_011800355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea anthophila
  ORGANISM  Pantoea anthophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea.
REFERENCE   1  (bases 1 to 4687373)
  AUTHORS   Khalaf,E.M. and Raizada,M.N.
  TITLE     Genome assembly of Pseudomonas<Strain_EKM101A>
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4687373)
  AUTHORS   Khalaf,E.M. and Raizada,M.N.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-FEB-2020) Plant Agriculture, University of Guelph, 50
            Stone Road, East, Guelph, ON N1G 2W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAALFR000000000.1.
            The Pantoea anthophila whole genome shotgun (WGS) project has the
            project accession NZ_JAALFR000000000.  This version of the project
            (01) has the accession number NZ_JAALFR010000000, and consists of
            sequences JAALFR010000001-JAALFR010000075.
            Bacteria and source DNA available from Cucumber seed wash.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: EvoCAT (Evogene Clustering & Assembly
                                      Toolbox) v. December-2019
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 91.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_011800355.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:09:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,467
            CDSs (total)                      :: 4,384
            Genes (coding)                    :: 4,315
            CDSs (with protein)               :: 4,315
            Genes (RNA)                       :: 83
            rRNAs                             :: 3, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 2, 5 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 22 of 69
            Pseudo Genes (incomplete)         :: 52 of 69
            Pseudo Genes (internal stop)      :: 19 of 69
            Pseudo Genes (multiple problems)  :: 21 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4687373
                     /organism="Pantoea anthophila"
                     /mol_type="genomic DNA"
                     /strain="EKM101A"
                     /isolation_source="Early seed surface sterilization rinse,
                     including the placenta and fruit pulp tissues"
                     /host="field cucumber"
                     /db_xref="taxon:470931"
                     /geo_loc_name="Canada: Guelph"
                     /collection_date="2014"
WGS         JAALFR010000001-JAALFR010000075
WGS_SCAFLD  NZ_JAALFR010000001-NZ_JAALFR010000075
//
LOCUS       NZ_JABUHT010000000   6753796 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas allii strain MAFF 301514, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABUHT000000000
VERSION     NZ_JABUHT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15051845
            Assembly: GCF_013392005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas allii
  ORGANISM  Pseudomonas allii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6753796)
  AUTHORS   Sawada,H., Fujikawa,T. and Satou,M.
  TITLE     Dismantling and reorganizing Pseudomonas marginalis sensu#lato
  JOURNAL   Plant Pathol 72 (4), 654-666 (2023)
  REMARK    DOI: 10.1111/ppa.13690
REFERENCE   2  (bases 1 to 6753796)
  AUTHORS   Sawada,H., Fujikawa,T., Tsuji,M. and Satou,M.
  TITLE     Pseudomonas allii sp. nov., a pathogen causing soft rot of onion in
            Japan
  JOURNAL   Int J Syst Evol Microbiol 71 (1) (2021)
   PUBMED   33270007
REFERENCE   3  (bases 1 to 6753796)
  AUTHORS   Fujikawa,T. and Sawada,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAY-2020) Institute of Fruit Tree and Tea Science,
            National Agriculture and Food Research Organization (NARO),
            Fujimoto 2-1, Tsukuba, Ibaraki 305-8605, Japan, Tsukuba, Ibaraki
            305-8605, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABUHT000000000.1.
            The Pseudomonas allii whole genome shotgun (WGS) project has the
            project accession NZ_JABUHT000000000.  This version of the project
            (01) has the accession number NZ_JABUHT010000000, and consists of
            sequences JABUHT010000001-JABUHT010000520.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from NARO Genebank.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: MAY-2020
            Assembly Method        :: CLC Genomics Workbench v. 20
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 55.74x
            Sequencing Technology  :: Ion Torrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013392005.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:44:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,444
            CDSs (total)                      :: 6,399
            Genes (coding)                    :: 5,672
            CDSs (with protein)               :: 5,672
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 727
            CDSs (without protein)            :: 727
            Pseudo Genes (ambiguous residues) :: 0 of 727
            Pseudo Genes (frameshifted)       :: 586 of 727
            Pseudo Genes (incomplete)         :: 159 of 727
            Pseudo Genes (internal stop)      :: 14 of 727
            Pseudo Genes (multiple problems)  :: 30 of 727
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6753796
                     /organism="Pseudomonas allii"
                     /mol_type="genomic DNA"
                     /strain="MAFF 301514"
                     /host="onion"
                     /type_material="type strain of Pseudomonas allii"
                     /db_xref="taxon:2740531"
                     /geo_loc_name="Japan: Hyogo"
                     /collection_date="1980"
WGS         JABUHT010000001-JABUHT010000520
WGS_SCAFLD  NZ_JABUHT010000001-NZ_JABUHT010000520
//
LOCUS       NZ_CBAXMA010000000   2892508 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Pelodictyon phaeoclathratiforme isolate
            PELAGICS-MAG-vs-bin045043-CADAH-SM-30jun22., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBAXMA000000000
VERSION     NZ_CBAXMA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117451687
            Assembly: GCF_964819785.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Pelodictyon phaeoclathratiforme (freshwater metagenome)
  ORGANISM  Pelodictyon phaeoclathratiforme
            Bacteria; Pseudomonadati; Chlorobiota; Chlorobiia; Chlorobiales;
            Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.
REFERENCE   1  (bases 1 to 2892508)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-DEC-2024) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBAXMA000000000.1.
            The Pelodictyon phaeoclathratiforme whole genome shotgun (WGS)
            project has the project accession NZ_CBAXMA000000000.  This version
            of the project (01) has the accession number NZ_CBAXMA010000000,
            and consists of sequences CBAXMA010000001-CBAXMA010000068.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964819785.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:12:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,863
            CDSs (total)                      :: 2,811
            Genes (coding)                    :: 2,727
            CDSs (with protein)               :: 2,727
            Genes (RNA)                       :: 52
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 84
            CDSs (without protein)            :: 84
            Pseudo Genes (ambiguous residues) :: 0 of 84
            Pseudo Genes (frameshifted)       :: 23 of 84
            Pseudo Genes (incomplete)         :: 63 of 84
            Pseudo Genes (internal stop)      :: 14 of 84
            Pseudo Genes (multiple problems)  :: 14 of 84
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2892508
                     /organism="Pelodictyon phaeoclathratiforme"
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-vs-bin045043-CADAH-SM-30jun22."
                     /isolation_source="Cadagno lake"
                     /db_xref="taxon:34090"
                     /environmental_sample
                     /geo_loc_name="Switzerland"
                     /collection_date="2022-06-30"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBAXMA010000001-CBAXMA010000068
WGS_SCAFLD  NZ_CBAXMA010000001-NZ_CBAXMA010000068
//
LOCUS       NZ_SNYT01000000      8008696 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paraburkholderia silvatlantica strain SRCL-319, whole genome
            shotgun sequencing project.
ACCESSION   NZ_SNYT00000000
VERSION     NZ_SNYT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08769417
            Assembly: GCF_004363225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paraburkholderia silvatlantica
  ORGANISM  Paraburkholderia silvatlantica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (bases 1 to 8008696)
  AUTHORS   Whitman,W.
  TITLE     Genomic Encyclopedia of Type Strains, Phase IV (KMG-V): Genome
            sequencing to study the core and pangenomes of soil and
            plant-associated prokaryotes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8008696)
  AUTHORS   Whitman,W., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAR-2019) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SNYT00000000.1.
            The Paraburkholderia silvatlantica whole genome shotgun (WGS)
            project has the project accession NZ_SNYT00000000.  This version of
            the project (01) has the accession number NZ_SNYT01000000, and
            consists of sequences SNYT01000001-SNYT01000074.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 125.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004363225.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:09:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,430
            CDSs (total)                      :: 7,362
            Genes (coding)                    :: 7,161
            CDSs (with protein)               :: 7,161
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 201
            CDSs (without protein)            :: 201
            Pseudo Genes (ambiguous residues) :: 0 of 201
            Pseudo Genes (frameshifted)       :: 55 of 201
            Pseudo Genes (incomplete)         :: 183 of 201
            Pseudo Genes (internal stop)      :: 14 of 201
            Pseudo Genes (multiple problems)  :: 42 of 201
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8008696
                     /organism="Paraburkholderia silvatlantica"
                     /mol_type="genomic DNA"
                     /strain="SRCL-319"
                     /db_xref="taxon:321895"
WGS         SNYT01000001-SNYT01000074
WGS_SCAFLD  NZ_SNYT01000001-NZ_SNYT01000074
//
LOCUS       NZ_JBBJRQ010000000   4968577 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 20NY0317, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJRQ000000000
VERSION     NZ_JBBJRQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623795
            Assembly: GCF_049789475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4968577)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4968577)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJRQ000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJRQ000000000.  This version of the project
            (01) has the accession number NZ_JBBJRQ010000000, and consists of
            sequences JBBJRQ010000001-JBBJRQ010000045.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049789475.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:58:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,681
            CDSs (total)                      :: 4,607
            Genes (coding)                    :: 4,545
            CDSs (with protein)               :: 4,545
            Genes (RNA)                       :: 74
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 19 of 62
            Pseudo Genes (incomplete)         :: 46 of 62
            Pseudo Genes (internal stop)      :: 15 of 62
            Pseudo Genes (multiple problems)  :: 15 of 62
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4968577
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="20NY0317"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: New York"
                     /collection_date="2020"
WGS         JBBJRQ010000001-JBBJRQ010000045
WGS_SCAFLD  NZ_JBBJRQ010000001-NZ_JBBJRQ010000045
//
LOCUS       NZ_CBBCBL010000000   5930850 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Prosthecobacter sp. isolate
            PELAGICS-MAG-m2-bin106376-FUSWH-LM-16jul20., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBBCBL000000000
VERSION     NZ_CBBCBL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117452369
            Assembly: GCF_964850565.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Prosthecobacter sp. (freshwater metagenome)
  ORGANISM  Prosthecobacter sp.
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Verrucomicrobiaceae; Prosthecobacter.
REFERENCE   1  (bases 1 to 5930850)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-JAN-2025) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBBCBL000000000.1.
            The Prosthecobacter sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBBCBL000000000.  This version of the project
            (01) has the accession number NZ_CBBCBL010000000, and consists of
            sequences CBBCBL010000001-CBBCBL010000157.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964850565.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:15:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,103
            CDSs (total)                      :: 5,053
            Genes (coding)                    :: 5,007
            CDSs (with protein)               :: 5,007
            Genes (RNA)                       :: 50
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 7 of 46
            Pseudo Genes (incomplete)         :: 38 of 46
            Pseudo Genes (internal stop)      :: 2 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5930850
                     /organism="Prosthecobacter sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-m2-bin106376-FUSWH-LM-16jul20."
                     /isolation_source="Grosse Fuchskuhle SW lake"
                     /db_xref="taxon:1965333"
                     /environmental_sample
                     /geo_loc_name="Germany"
                     /collection_date="2020-07-16"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBBCBL010000001-CBBCBL010000157
WGS_SCAFLD  NZ_CBBCBL010000001-NZ_CBBCBL010000157
//
LOCUS       NZ_JBBJSH010000000   4983121 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 20CA0041, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJSH000000000
VERSION     NZ_JBBJSH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623778
            Assembly: GCF_049790075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4983121)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4983121)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJSH000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJSH000000000.  This version of the project
            (01) has the accession number NZ_JBBJSH010000000, and consists of
            sequences JBBJSH010000001-JBBJSH010000037.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049790075.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:59:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,691
            CDSs (total)                      :: 4,596
            Genes (coding)                    :: 4,534
            CDSs (with protein)               :: 4,534
            Genes (RNA)                       :: 95
            rRNAs                             :: 7, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 20 of 62
            Pseudo Genes (incomplete)         :: 52 of 62
            Pseudo Genes (internal stop)      :: 15 of 62
            Pseudo Genes (multiple problems)  :: 18 of 62
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4983121
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="20CA0041"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: California"
                     /collection_date="2020"
WGS         JBBJSH010000001-JBBJSH010000037
WGS_SCAFLD  NZ_JBBJSH010000001-NZ_JBBJSH010000037
//
LOCUS       NZ_JAHTBI010000000   5703090 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas aegrilactucae strain MAFF 301350, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAHTBI000000000
VERSION     NZ_JAHTBI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN19959866
            Assembly: GCF_019168305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aegrilactucae
  ORGANISM  Pseudomonas aegrilactucae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 5703090)
  AUTHORS   Sawada,H., Fujikawa,T. and Satou,M.
  TITLE     Dismantling and reorganizing Pseudomonas marginalis sensu#lato
  JOURNAL   Plant Pathol 72 (4), 654-666 (2023)
  REMARK    DOI: 10.1111/ppa.13690
REFERENCE   2  (bases 1 to 5703090)
  AUTHORS   Sawada,H., Fujikawa,T. and Satou,M.
  TITLE     Pseudomonas aegrilactucae sp. nov. and Pseudomonas morbosilactucae
            sp. nov., pathogens causing bacterial rot of lettuce in Japan
  JOURNAL   Int J Syst Evol Microbiol 72 (11) (2022)
   PUBMED   36331109
REFERENCE   3  (bases 1 to 5703090)
  AUTHORS   Fujikawa,T. and Sawada,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUL-2021) Institute for Plant Protection, National
            Agriculture and Food Research Organization (NARO), Kannondai
            2-1-18, Tsukuba, Ibaraki 305-8666, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAHTBI000000000.1.
            The Pseudomonas aegrilactucae whole genome shotgun (WGS) project
            has the project accession NZ_JAHTBI000000000.  This version of the
            project (01) has the accession number NZ_JAHTBI010000000, and
            consists of sequences JAHTBI010000001-JAHTBI010000187.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from NARO Genebank.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2021
            Assembly Method        :: CLC Genomics Workbench v. 21
            Assembly Name          :: MAFF301350
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 43.1x
            Sequencing Technology  :: IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_019168305.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:33:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,364
            CDSs (total)                      :: 5,298
            Genes (coding)                    :: 5,085
            CDSs (with protein)               :: 5,085
            Genes (RNA)                       :: 66
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 213
            CDSs (without protein)            :: 213
            Pseudo Genes (ambiguous residues) :: 0 of 213
            Pseudo Genes (frameshifted)       :: 83 of 213
            Pseudo Genes (incomplete)         :: 139 of 213
            Pseudo Genes (internal stop)      :: 6 of 213
            Pseudo Genes (multiple problems)  :: 13 of 213
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5703090
                     /organism="Pseudomonas aegrilactucae"
                     /mol_type="genomic DNA"
                     /strain="MAFF 301350"
                     /host="lettuce"
                     /type_material="type strain of Pseudomonas aegrilactucae"
                     /db_xref="taxon:2854028"
                     /geo_loc_name="Japan: Fukuoka"
                     /collection_date="1977"
WGS         JAHTBI010000001-JAHTBI010000187
WGS_SCAFLD  NZ_JAHTBI010000001-NZ_JAHTBI010000187
//
LOCUS       NZ_JBBJQC010000000   4928565 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain BCC0383, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBJQC000000000
VERSION     NZ_JBBJQC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623835
            Assembly: GCF_049787765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4928565)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4928565)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJQC000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJQC000000000.  This version of the project
            (01) has the accession number NZ_JBBJQC010000000, and consists of
            sequences JBBJQC010000001-JBBJQC010000065.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049787765.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:02:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,624
            CDSs (total)                      :: 4,545
            Genes (coding)                    :: 4,480
            CDSs (with protein)               :: 4,480
            Genes (RNA)                       :: 79
            rRNAs                             :: 3, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 26 of 65
            Pseudo Genes (incomplete)         :: 42 of 65
            Pseudo Genes (internal stop)      :: 19 of 65
            Pseudo Genes (multiple problems)  :: 17 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4928565
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="BCC0383"
                     /host="Eucalyptus sp."
                     /db_xref="taxon:549"
                     /geo_loc_name="Uruguay"
                     /collection_date="2004"
WGS         JBBJQC010000001-JBBJQC010000065
WGS_SCAFLD  NZ_JBBJQC010000001-NZ_JBBJQC010000065
//
LOCUS       NZ_JAUKTR010000000   2639530 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Peiella sedimenti strain XZ-24, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAUKTR000000000
VERSION     NZ_JAUKTR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN36410630
            Assembly: GCF_030504955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Peiella sedimenti
  ORGANISM  Peiella sedimenti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Caulobacterales; Caulobacteraceae; Peiella.
REFERENCE   1  (bases 1 to 2639530)
  AUTHORS   Wu,N.
  TITLE     Brevundimonas soil sp. nov., isolated from the soil of chemical
            plant
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2639530)
  AUTHORS   Wu,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2023) School of Life Science, Nanjing
            Agriculteral University, No. 1 Weigang District, Nanjing, Jiangsu
            21009518, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAUKTR000000000.1.
            The Peiella sedimenti whole genome shotgun (WGS) project has the
            project accession NZ_JAUKTR000000000.  This version of the project
            (01) has the accession number NZ_JAUKTR010000000, and consists of
            sequences JAUKTR010000001-JAUKTR010000007.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: ABySS v. 2.2.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 628.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_030504955.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:46:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,706
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 17
            CDSs (without protein)            :: 17
            Pseudo Genes (ambiguous residues) :: 0 of 17
            Pseudo Genes (frameshifted)       :: 0 of 17
            Pseudo Genes (incomplete)         :: 17 of 17
            Pseudo Genes (internal stop)      :: 0 of 17
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2639530
                     /organism="Peiella sedimenti"
                     /mol_type="genomic DNA"
                     /strain="XZ-24"
                     /isolation_source="chemical plant soil"
                     /type_material="type strain of Peiella sedimenti"
                     /db_xref="taxon:3061083"
                     /geo_loc_name="China: Mianyang"
                     /collection_date="2023-05-20"
WGS         JAUKTR010000001-JAUKTR010000007
WGS_SCAFLD  NZ_JAUKTR010000001-NZ_JAUKTR010000007
//
LOCUS       NZ_JBBJQL010000000   5015876 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 21OR0142, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJQL000000000
VERSION     NZ_JBBJQL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623826
            Assembly: GCF_049788095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 5015876)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5015876)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJQL000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJQL000000000.  This version of the project
            (01) has the accession number NZ_JBBJQL010000000, and consists of
            sequences JBBJQL010000001-JBBJQL010000084.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049788095.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:00:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,711
            CDSs (total)                      :: 4,630
            Genes (coding)                    :: 4,570
            CDSs (with protein)               :: 4,570
            Genes (RNA)                       :: 81
            rRNAs                             :: 4, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 15 of 60
            Pseudo Genes (incomplete)         :: 52 of 60
            Pseudo Genes (internal stop)      :: 14 of 60
            Pseudo Genes (multiple problems)  :: 15 of 60
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5015876
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="21OR0142"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Oregon"
                     /collection_date="2021"
WGS         JBBJQL010000001-JBBJQL010000084
WGS_SCAFLD  NZ_JBBJQL010000001-NZ_JBBJQL010000084
//
LOCUS       NZ_JARFTN010000000   3804357 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Plesiomonas shigelloides strain U71, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JARFTN000000000
VERSION     NZ_JARFTN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN33598498
            Assembly: GCF_038419915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Plesiomonas shigelloides
  ORGANISM  Plesiomonas shigelloides
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Plesiomonas.
REFERENCE   1  (bases 1 to 3804357)
  AUTHORS   Batista,M.S., Oliveira,J.C.A., Miranda,F.M., Seyffert,N.,
            Castro,T.P., Gomide,A.P., Souza,R.S., Gouveia,G.V., Gouveia,J.S.,
            Azevedo,V., Da Costa,M., Ferrari,N.A. and Da Costa,A.R.
  TITLE     Comparative Genome Analysis of Aeromonas from aquatic organisms and
            environment in Northestern Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3804357)
  AUTHORS   Batista,M.S., Oliveira,J.C.A., Miranda,F.M., Seyffert,N.,
            Castro,T.P., Gomide,A.P., Souza,R.S., Gouveia,G.V., Gouveia,J.S.,
            Azevedo,V., Da Costa,M., Ferrari,N.A. and Da Costa,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAR-2023) General Biology, UFMG, Av Antonio Carlos
            6627, Pampulha, Belo Horizonte, Minhas Gerais 31270-901, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARFTN000000000.1.
            The Plesiomonas shigelloides whole genome shotgun (WGS) project has
            the project accession NZ_JARFTN000000000.  This version of the
            project (01) has the accession number NZ_JARFTN010000000, and
            consists of sequences JARFTN010000001-JARFTN010000078.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-MAR-2023
            Assembly Method        :: Unicycler v. 0.5.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 518.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038419915.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:55:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,424
            CDSs (total)                      :: 3,316
            Genes (coding)                    :: 3,267
            CDSs (with protein)               :: 3,267
            Genes (RNA)                       :: 108
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 98
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 9 of 49
            Pseudo Genes (incomplete)         :: 43 of 49
            Pseudo Genes (internal stop)      :: 5 of 49
            Pseudo Genes (multiple problems)  :: 6 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3804357
                     /organism="Plesiomonas shigelloides"
                     /mol_type="genomic DNA"
                     /strain="U71"
                     /isolation_source="Nile tilapia gonads"
                     /host="Oreochromis niloticus"
                     /db_xref="taxon:703"
                     /geo_loc_name="Brazil: Nova Aurora"
                     /lat_lon="24.52955011 S 53.25588608 W"
                     /collection_date="2020-08-30"
WGS         JARFTN010000001-JARFTN010000078
WGS_SCAFLD  NZ_JARFTN010000001-NZ_JARFTN010000078
//
LOCUS       NZ_JALKMA010000000   5048853 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea ananatis strain 99-11, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JALKMA000000000
VERSION     NZ_JALKMA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27527376
            Assembly: GCF_029086895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea ananatis
  ORGANISM  Pantoea ananatis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea.
REFERENCE   1  (bases 1 to 5048853)
  AUTHORS   Myers,B.K., Shin,G.Y., Agarwal,G., Stice,S.P., Gitaitis,R.D.,
            Kvitko,B.H. and Dutta,B.
  TITLE     Genome-wide association and dissociation studies in Pantoea
            ananatis reveal potential virulence factors affecting Allium porrum
            and Allium fistulosum x Allium cepa hybrid
  JOURNAL   Front Microbiol 13, 1094155 (2023)
   PUBMED   36817114
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5048853)
  AUTHORS   Myers,B.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2022) Plant Pathology, University of Georgia,
            2806 Rebecca Rd, Tifton, GA 31794, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALKMA000000000.1.
            The Pantoea ananatis whole genome shotgun (WGS) project has the
            project accession NZ_JALKMA000000000.  This version of the project
            (01) has the accession number NZ_JALKMA010000000, and consists of
            sequences JALKMA010000001-JALKMA010000081.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 10-20x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029086895.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:02:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,758
            CDSs (total)                      :: 4,679
            Genes (coding)                    :: 4,583
            CDSs (with protein)               :: 4,583
            Genes (RNA)                       :: 79
            rRNAs                             :: 4, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 20
            Pseudo Genes (total)              :: 96
            CDSs (without protein)            :: 96
            Pseudo Genes (ambiguous residues) :: 0 of 96
            Pseudo Genes (frameshifted)       :: 44 of 96
            Pseudo Genes (incomplete)         :: 68 of 96
            Pseudo Genes (internal stop)      :: 24 of 96
            Pseudo Genes (multiple problems)  :: 31 of 96
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5048853
                     /organism="Pantoea ananatis"
                     /mol_type="genomic DNA"
                     /strain="99-11"
                     /host="Digitaria sp."
                     /db_xref="taxon:553"
                     /geo_loc_name="USA: Tift Co. GA"
                     /collection_date="1999"
WGS         JALKMA010000001-JALKMA010000081
WGS_SCAFLD  NZ_JALKMA010000001-NZ_JALKMA010000081
//
LOCUS       NZ_JBNCQX010000000   4580693 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Providencia huaxiensis strain Z29CR2279, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNCQX000000000
VERSION     NZ_JBNCQX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47496877
            Assembly: GCF_049843375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Providencia huaxiensis
  ORGANISM  Providencia huaxiensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Providencia.
REFERENCE   1  (bases 1 to 4580693)
  AUTHORS   Li,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2025) Laboratory Medicine Center, Department of
            Clinical Laboratory, Zhejiang Provincial People's Hospital
            (Affiliated People's Hospital, Hangzhou Medical College), Shangtang
            road, Hangzhou 310014, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCQX000000000.1.
            The Providencia huaxiensis whole genome shotgun (WGS) project has
            the project accession NZ_JBNCQX000000000.  This version of the
            project (01) has the accession number NZ_JBNCQX010000000, and
            consists of sequences JBNCQX010000001-JBNCQX010000087.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 10
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049843375.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:58:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,329
            CDSs (total)                      :: 4,251
            Genes (coding)                    :: 4,189
            CDSs (with protein)               :: 4,189
            Genes (RNA)                       :: 78
            rRNAs                             :: 2, 2, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 6 (16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 15 of 62
            Pseudo Genes (incomplete)         :: 40 of 62
            Pseudo Genes (internal stop)      :: 13 of 62
            Pseudo Genes (multiple problems)  :: 4 of 62
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4580693
                     /organism="Providencia huaxiensis"
                     /mol_type="genomic DNA"
                     /strain="Z29CR2279"
                     /host="Homo sapiens"
                     /db_xref="taxon:2027290"
                     /geo_loc_name="China: Hangzhou"
                     /collection_date="2022"
                     /collected_by="Jiayao Yao"
WGS         JBNCQX010000001-JBNCQX010000087
WGS_SCAFLD  NZ_JBNCQX010000001-NZ_JBNCQX010000087
//
LOCUS       NZ_JBBJPY010000000   5012783 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain PNG 01-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJPY000000000
VERSION     NZ_JBBJPY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623839
            Assembly: GCF_049787595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 5012783)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5012783)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJPY000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJPY000000000.  This version of the project
            (01) has the accession number NZ_JBBJPY010000000, and consists of
            sequences JBBJPY010000001-JBBJPY010000042.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049787595.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:06:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,716
            CDSs (total)                      :: 4,600
            Genes (coding)                    :: 4,535
            CDSs (with protein)               :: 4,535
            Genes (RNA)                       :: 116
            rRNAs                             :: 11, 8, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 5, 8, 10 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 29 of 65
            Pseudo Genes (incomplete)         :: 46 of 65
            Pseudo Genes (internal stop)      :: 19 of 65
            Pseudo Genes (multiple problems)  :: 20 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5012783
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="PNG 01-1"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2001"
WGS         JBBJPY010000001-JBBJPY010000042
WGS_SCAFLD  NZ_JBBJPY010000001-NZ_JBBJPY010000042
//
LOCUS       NZ_JBBJQA010000000   4917434 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain CV158, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBJQA000000000
VERSION     NZ_JBBJQA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623837
            Assembly: GCF_049787735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4917434)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4917434)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJQA000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJQA000000000.  This version of the project
            (01) has the accession number NZ_JBBJQA010000000, and consists of
            sequences JBBJQA010000001-JBBJQA010000043.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049787735.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:08:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,591
            CDSs (total)                      :: 4,517
            Genes (coding)                    :: 4,455
            CDSs (with protein)               :: 4,455
            Genes (RNA)                       :: 74
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 23 of 62
            Pseudo Genes (incomplete)         :: 46 of 62
            Pseudo Genes (internal stop)      :: 15 of 62
            Pseudo Genes (multiple problems)  :: 16 of 62
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4917434
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="CV158"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Oregon"
                     /collection_date="2020"
WGS         JBBJQA010000001-JBBJQA010000043
WGS_SCAFLD  NZ_JBBJQA010000001-NZ_JBBJQA010000043
//
LOCUS       NZ_JBNCRB010000000   4595213 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Providencia hangzhouensis strain Z32CR2270, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNCRB000000000
VERSION     NZ_JBNCRB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47496873
            Assembly: GCF_049843455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Providencia hangzhouensis
  ORGANISM  Providencia hangzhouensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Providencia.
REFERENCE   1  (bases 1 to 4595213)
  AUTHORS   Li,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2025) Laboratory Medicine Center, Department of
            Clinical Laboratory, Zhejiang Provincial People's Hospital
            (Affiliated People's Hospital, Hangzhou Medical College), Shangtang
            road, Hangzhou 310014, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCRB000000000.1.
            The Providencia hangzhouensis whole genome shotgun (WGS) project
            has the project accession NZ_JBNCRB000000000.  This version of the
            project (01) has the accession number NZ_JBNCRB010000000, and
            consists of sequences JBNCRB010000001-JBNCRB010000065.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 10
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049843455.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:02:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,336
            CDSs (total)                      :: 4,263
            Genes (coding)                    :: 4,205
            CDSs (with protein)               :: 4,205
            Genes (RNA)                       :: 73
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 58
            CDSs (without protein)            :: 58
            Pseudo Genes (ambiguous residues) :: 0 of 58
            Pseudo Genes (frameshifted)       :: 16 of 58
            Pseudo Genes (incomplete)         :: 42 of 58
            Pseudo Genes (internal stop)      :: 11 of 58
            Pseudo Genes (multiple problems)  :: 9 of 58
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4595213
                     /organism="Providencia hangzhouensis"
                     /mol_type="genomic DNA"
                     /strain="Z32CR2270"
                     /host="Homo sapiens"
                     /db_xref="taxon:3031799"
                     /geo_loc_name="China: Hangzhou"
                     /collection_date="2022"
                     /collected_by="Jiayao Yao"
WGS         JBNCRB010000001-JBNCRB010000065
WGS_SCAFLD  NZ_JBNCRB010000001-NZ_JBNCRB010000065
//
LOCUS       NZ_JALKJN010000000   4966506 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea ananatis strain 99-33, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JALKJN000000000
VERSION     NZ_JALKJN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27527449
            Assembly: GCF_029081215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea ananatis
  ORGANISM  Pantoea ananatis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea.
REFERENCE   1  (bases 1 to 4966506)
  AUTHORS   Myers,B.K., Shin,G.Y., Agarwal,G., Stice,S.P., Gitaitis,R.D.,
            Kvitko,B.H. and Dutta,B.
  TITLE     Genome-wide association and dissociation studies in Pantoea
            ananatis reveal potential virulence factors affecting Allium porrum
            and Allium fistulosum x Allium cepa hybrid
  JOURNAL   Front Microbiol 13, 1094155 (2023)
   PUBMED   36817114
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4966506)
  AUTHORS   Myers,B.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2022) Plant Pathology, University of Georgia,
            2806 Rebecca Rd, Tifton, GA 31794, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALKJN000000000.1.
            The Pantoea ananatis whole genome shotgun (WGS) project has the
            project accession NZ_JALKJN000000000.  This version of the project
            (01) has the accession number NZ_JALKJN010000000, and consists of
            sequences JALKJN010000001-JALKJN010000053.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 10-20x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029081215.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:09:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,624
            CDSs (total)                      :: 4,550
            Genes (coding)                    :: 4,460
            CDSs (with protein)               :: 4,460
            Genes (RNA)                       :: 74
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 52
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 90
            CDSs (without protein)            :: 90
            Pseudo Genes (ambiguous residues) :: 0 of 90
            Pseudo Genes (frameshifted)       :: 45 of 90
            Pseudo Genes (incomplete)         :: 59 of 90
            Pseudo Genes (internal stop)      :: 28 of 90
            Pseudo Genes (multiple problems)  :: 35 of 90
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4966506
                     /organism="Pantoea ananatis"
                     /mol_type="genomic DNA"
                     /strain="99-33"
                     /host="Richardia scabra L."
                     /db_xref="taxon:553"
                     /geo_loc_name="USA: Coffee Co. GA"
                     /collection_date="1999"
WGS         JALKJN010000001-JALKJN010000053
WGS_SCAFLD  NZ_JALKJN010000001-NZ_JALKJN010000053
//
LOCUS       NZ_JALKLZ010000000   5051492 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea ananatis strain 99-12, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JALKLZ000000000
VERSION     NZ_JALKLZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27527377
            Assembly: GCF_029086925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea ananatis
  ORGANISM  Pantoea ananatis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea.
REFERENCE   1  (bases 1 to 5051492)
  AUTHORS   Myers,B.K., Shin,G.Y., Agarwal,G., Stice,S.P., Gitaitis,R.D.,
            Kvitko,B.H. and Dutta,B.
  TITLE     Genome-wide association and dissociation studies in Pantoea
            ananatis reveal potential virulence factors affecting Allium porrum
            and Allium fistulosum x Allium cepa hybrid
  JOURNAL   Front Microbiol 13, 1094155 (2023)
   PUBMED   36817114
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5051492)
  AUTHORS   Myers,B.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2022) Plant Pathology, University of Georgia,
            2806 Rebecca Rd, Tifton, GA 31794, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALKLZ000000000.1.
            The Pantoea ananatis whole genome shotgun (WGS) project has the
            project accession NZ_JALKLZ000000000.  This version of the project
            (01) has the accession number NZ_JALKLZ010000000, and consists of
            sequences JALKLZ010000001-JALKLZ010000083.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 10-20x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029086925.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:15:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,778
            CDSs (total)                      :: 4,683
            Genes (coding)                    :: 4,582
            CDSs (with protein)               :: 4,582
            Genes (RNA)                       :: 95
            rRNAs                             :: 4, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 18
            Pseudo Genes (total)              :: 101
            CDSs (without protein)            :: 101
            Pseudo Genes (ambiguous residues) :: 0 of 101
            Pseudo Genes (frameshifted)       :: 46 of 101
            Pseudo Genes (incomplete)         :: 71 of 101
            Pseudo Genes (internal stop)      :: 25 of 101
            Pseudo Genes (multiple problems)  :: 32 of 101
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5051492
                     /organism="Pantoea ananatis"
                     /mol_type="genomic DNA"
                     /strain="99-12"
                     /host="Digitaria sp."
                     /db_xref="taxon:553"
                     /geo_loc_name="USA: Tift Co. GA"
                     /collection_date="1999"
WGS         JALKLZ010000001-JALKLZ010000083
WGS_SCAFLD  NZ_JALKLZ010000001-NZ_JALKLZ010000083
//
LOCUS       NZ_JBNCRC010000000   4850223 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Providencia hangzhouensis strain Z24CR2199, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNCRC000000000
VERSION     NZ_JBNCRC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47496872
            Assembly: GCF_049843475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Providencia hangzhouensis
  ORGANISM  Providencia hangzhouensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Providencia.
REFERENCE   1  (bases 1 to 4850223)
  AUTHORS   Li,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2025) Laboratory Medicine Center, Department of
            Clinical Laboratory, Zhejiang Provincial People's Hospital
            (Affiliated People's Hospital, Hangzhou Medical College), Shangtang
            road, Hangzhou 310014, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCRC000000000.1.
            The Providencia hangzhouensis whole genome shotgun (WGS) project
            has the project accession NZ_JBNCRC000000000.  This version of the
            project (01) has the accession number NZ_JBNCRC010000000, and
            consists of sequences JBNCRC010000001-JBNCRC010000086.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 10
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049843475.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:03:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,604
            CDSs (total)                      :: 4,525
            Genes (coding)                    :: 4,463
            CDSs (with protein)               :: 4,463
            Genes (RNA)                       :: 79
            rRNAs                             :: 3, 1, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1, 6 (5S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 13 of 62
            Pseudo Genes (incomplete)         :: 48 of 62
            Pseudo Genes (internal stop)      :: 15 of 62
            Pseudo Genes (multiple problems)  :: 12 of 62
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4850223
                     /organism="Providencia hangzhouensis"
                     /mol_type="genomic DNA"
                     /strain="Z24CR2199"
                     /host="Homo sapiens"
                     /db_xref="taxon:3031799"
                     /geo_loc_name="China: Hangzhou"
                     /collection_date="2021"
                     /collected_by="Jiayao Yao"
WGS         JBNCRC010000001-JBNCRC010000086
WGS_SCAFLD  NZ_JBNCRC010000001-NZ_JBNCRC010000086
//
LOCUS       NZ_JBBJRZ010000000   5014828 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 20GA0030, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJRZ000000000
VERSION     NZ_JBBJRZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623786
            Assembly: GCF_049789755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 5014828)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5014828)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJRZ000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJRZ000000000.  This version of the project
            (01) has the accession number NZ_JBBJRZ010000000, and consists of
            sequences JBBJRZ010000001-JBBJRZ010000064.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049789755.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:12:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,690
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,548
            CDSs (with protein)               :: 4,548
            Genes (RNA)                       :: 79
            rRNAs                             :: 2, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 16 of 63
            Pseudo Genes (incomplete)         :: 53 of 63
            Pseudo Genes (internal stop)      :: 14 of 63
            Pseudo Genes (multiple problems)  :: 16 of 63
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5014828
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="20GA0030"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2020"
WGS         JBBJRZ010000001-JBBJRZ010000064
WGS_SCAFLD  NZ_JBBJRZ010000001-NZ_JBBJRZ010000064
//
LOCUS       NZ_JAMSAH010000000   4002145 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Proteus mirabilis strain JZ54, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAMSAH000000000
VERSION     NZ_JAMSAH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN28928622
            Assembly: GCF_029435415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Proteus mirabilis
  ORGANISM  Proteus mirabilis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Proteus.
REFERENCE   1  (bases 1 to 4002145)
  AUTHORS   Ma,W.Q., Han,Y.Y., Zhou,L., Peng,W.Q., Mao,L.Y., Yang,X., Wang,Q.,
            Zhang,T.J., Wang,H.N. and Lei,C.W.
  TITLE     Contamination of Proteus mirabilis harbouring various clinically
            important antimicrobial resistance genes in retail meat and aquatic
            products from food markets in China
  JOURNAL   Front Microbiol 13, 1086800 (2022)
   PUBMED   36590410
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4002145)
  AUTHORS   Lei,C.-W.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUN-2022) College of Life Sciences, Sichuan
            University, No. 29 Wangjiang Road, Chengdu 610064, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAMSAH000000000.1.
            The Proteus mirabilis whole genome shotgun (WGS) project has the
            project accession NZ_JAMSAH000000000.  This version of the project
            (01) has the accession number NZ_JAMSAH010000000, and consists of
            sequences JAMSAH010000001-JAMSAH010000079.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-MAR-2022
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029435415.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:01:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,713
            CDSs (total)                      :: 3,633
            Genes (coding)                    :: 3,559
            CDSs (with protein)               :: 3,559
            Genes (RNA)                       :: 80
            rRNAs                             :: 4, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 4, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 17 of 74
            Pseudo Genes (incomplete)         :: 60 of 74
            Pseudo Genes (internal stop)      :: 15 of 74
            Pseudo Genes (multiple problems)  :: 14 of 74
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4002145
                     /organism="Proteus mirabilis"
                     /mol_type="genomic DNA"
                     /strain="JZ54"
                     /isolation_source="Pork meat"
                     /db_xref="taxon:584"
                     /geo_loc_name="China: Chengdu"
                     /lat_lon="30.64 N 104.09 E"
                     /collection_date="2022"
                     /collected_by="Chang-Wei Lei"
WGS         JAMSAH010000001-JAMSAH010000079
WGS_SCAFLD  NZ_JAMSAH010000001-NZ_JAMSAH010000079
//
LOCUS       NZ_JBNCQZ010000000   4717225 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Providencia huaxiensis strain Z21CR2119, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNCQZ000000000
VERSION     NZ_JBNCQZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47496875
            Assembly: GCF_049843415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Providencia huaxiensis
  ORGANISM  Providencia huaxiensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Providencia.
REFERENCE   1  (bases 1 to 4717225)
  AUTHORS   Li,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2025) Laboratory Medicine Center, Department of
            Clinical Laboratory, Zhejiang Provincial People's Hospital
            (Affiliated People's Hospital, Hangzhou Medical College), Shangtang
            road, Hangzhou 310014, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCQZ000000000.1.
            The Providencia huaxiensis whole genome shotgun (WGS) project has
            the project accession NZ_JBNCQZ000000000.  This version of the
            project (01) has the accession number NZ_JBNCQZ010000000, and
            consists of sequences JBNCQZ010000001-JBNCQZ010000117.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 10
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049843415.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:03:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,489
            CDSs (total)                      :: 4,411
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 78
            rRNAs                             :: 2, 2, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 6 (16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 15 of 69
            Pseudo Genes (incomplete)         :: 47 of 69
            Pseudo Genes (internal stop)      :: 13 of 69
            Pseudo Genes (multiple problems)  :: 4 of 69
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4717225
                     /organism="Providencia huaxiensis"
                     /mol_type="genomic DNA"
                     /strain="Z21CR2119"
                     /host="Homo sapiens"
                     /db_xref="taxon:2027290"
                     /geo_loc_name="China: Hangzhou"
                     /collection_date="2021"
                     /collected_by="Jiayao Yao"
WGS         JBNCQZ010000001-JBNCQZ010000117
WGS_SCAFLD  NZ_JBNCQZ010000001-NZ_JBNCQZ010000117
//
LOCUS       NZ_JBBJRD010000000   4948548 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 20UT001, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBJRD000000000
VERSION     NZ_JBBJRD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623808
            Assembly: GCF_049788875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4948548)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4948548)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJRD000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJRD000000000.  This version of the project
            (01) has the accession number NZ_JBBJRD010000000, and consists of
            sequences JBBJRD010000001-JBBJRD010000061.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049788875.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:17:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,632
            CDSs (total)                      :: 4,528
            Genes (coding)                    :: 4,466
            CDSs (with protein)               :: 4,466
            Genes (RNA)                       :: 104
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 16S)
            partial rRNAs                     :: 1, 6, 7 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 19 of 62
            Pseudo Genes (incomplete)         :: 47 of 62
            Pseudo Genes (internal stop)      :: 14 of 62
            Pseudo Genes (multiple problems)  :: 13 of 62
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4948548
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="20UT001"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Utah"
                     /collection_date="2020"
WGS         JBBJRD010000001-JBBJRD010000061
WGS_SCAFLD  NZ_JBBJRD010000001-NZ_JBBJRD010000061
//
LOCUS       NZ_JBNCQY010000000   4620813 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Providencia huaxiensis strain Z26CR2253, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNCQY000000000
VERSION     NZ_JBNCQY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47496876
            Assembly: GCF_049843395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Providencia huaxiensis
  ORGANISM  Providencia huaxiensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Providencia.
REFERENCE   1  (bases 1 to 4620813)
  AUTHORS   Li,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2025) Laboratory Medicine Center, Department of
            Clinical Laboratory, Zhejiang Provincial People's Hospital
            (Affiliated People's Hospital, Hangzhou Medical College), Shangtang
            road, Hangzhou 310014, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCQY000000000.1.
            The Providencia huaxiensis whole genome shotgun (WGS) project has
            the project accession NZ_JBNCQY000000000.  This version of the
            project (01) has the accession number NZ_JBNCQY010000000, and
            consists of sequences JBNCQY010000001-JBNCQY010000092.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 10
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049843395.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:08:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,382
            CDSs (total)                      :: 4,304
            Genes (coding)                    :: 4,240
            CDSs (with protein)               :: 4,240
            Genes (RNA)                       :: 78
            rRNAs                             :: 2, 2, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 6 (16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 15 of 64
            Pseudo Genes (incomplete)         :: 42 of 64
            Pseudo Genes (internal stop)      :: 13 of 64
            Pseudo Genes (multiple problems)  :: 4 of 64
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4620813
                     /organism="Providencia huaxiensis"
                     /mol_type="genomic DNA"
                     /strain="Z26CR2253"
                     /host="Homo sapiens"
                     /db_xref="taxon:2027290"
                     /geo_loc_name="China: Hangzhou"
                     /collection_date="2022"
                     /collected_by="Jiayao Yao"
WGS         JBNCQY010000001-JBNCQY010000092
WGS_SCAFLD  NZ_JBNCQY010000001-NZ_JBNCQY010000092
//
LOCUS       NZ_JBBJRX010000000   4935280 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 20GA0400, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJRX000000000
VERSION     NZ_JBBJRX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623788
            Assembly: GCF_049789685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4935280)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4935280)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJRX000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJRX000000000.  This version of the project
            (01) has the accession number NZ_JBBJRX010000000, and consists of
            sequences JBBJRX010000001-JBBJRX010000069.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049789685.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:13:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,604
            CDSs (total)                      :: 4,525
            Genes (coding)                    :: 4,461
            CDSs (with protein)               :: 4,461
            Genes (RNA)                       :: 79
            rRNAs                             :: 2, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 4 (5S, 16S)
            tRNAs                             :: 63
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 21 of 64
            Pseudo Genes (incomplete)         :: 54 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 19 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4935280
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="20GA0400"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2020"
WGS         JBBJRX010000001-JBBJRX010000069
WGS_SCAFLD  NZ_JBBJRX010000001-NZ_JBBJRX010000069
//
LOCUS       NZ_JBNCRA010000000   4611714 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Providencia huaxiensis strain Z2CR1897, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNCRA000000000
VERSION     NZ_JBNCRA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47496874
            Assembly: GCF_049843435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Providencia huaxiensis
  ORGANISM  Providencia huaxiensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Providencia.
REFERENCE   1  (bases 1 to 4611714)
  AUTHORS   Li,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2025) Laboratory Medicine Center, Department of
            Clinical Laboratory, Zhejiang Provincial People's Hospital
            (Affiliated People's Hospital, Hangzhou Medical College), Shangtang
            road, Hangzhou 310014, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCRA000000000.1.
            The Providencia huaxiensis whole genome shotgun (WGS) project has
            the project accession NZ_JBNCRA000000000.  This version of the
            project (01) has the accession number NZ_JBNCRA010000000, and
            consists of sequences JBNCRA010000001-JBNCRA010000096.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 10
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049843435.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:06:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,362
            CDSs (total)                      :: 4,284
            Genes (coding)                    :: 4,217
            CDSs (with protein)               :: 4,217
            Genes (RNA)                       :: 78
            rRNAs                             :: 2, 2, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 6 (16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 14 of 67
            Pseudo Genes (incomplete)         :: 46 of 67
            Pseudo Genes (internal stop)      :: 13 of 67
            Pseudo Genes (multiple problems)  :: 4 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4611714
                     /organism="Providencia huaxiensis"
                     /mol_type="genomic DNA"
                     /strain="Z2CR1897"
                     /host="Homo sapiens"
                     /db_xref="taxon:2027290"
                     /geo_loc_name="China: Hangzhou"
                     /collection_date="2018"
                     /collected_by="Jiayao Yao"
WGS         JBNCRA010000001-JBNCRA010000096
WGS_SCAFLD  NZ_JBNCRA010000001-NZ_JBNCRA010000096
//
LOCUS       NZ_CBABVY010000000   2693430 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Sandarakinorhabdus limnophila isolate
            PELAGICS-MAG-m2-bin116433-PRSCE-SM-22mar22., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBABVY000000000
VERSION     NZ_CBABVY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117450691
            Assembly: GCF_964673395.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Sandarakinorhabdus limnophila (freshwater metagenome)
  ORGANISM  Sandarakinorhabdus limnophila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandarakinorhabdus.
REFERENCE   1  (bases 1 to 2693430)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-DEC-2024) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBABVY000000000.1.
            The Sandarakinorhabdus limnophila whole genome shotgun (WGS)
            project has the project accession NZ_CBABVY000000000.  This version
            of the project (01) has the accession number NZ_CBABVY010000000,
            and consists of sequences CBABVY010000001-CBABVY010000169.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964673395.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 01:25:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,763
            CDSs (total)                      :: 2,714
            Genes (coding)                    :: 2,635
            CDSs (with protein)               :: 2,635
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 9 of 79
            Pseudo Genes (incomplete)         :: 70 of 79
            Pseudo Genes (internal stop)      :: 3 of 79
            Pseudo Genes (multiple problems)  :: 2 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2693430
                     /organism="Sandarakinorhabdus limnophila"
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-m2-bin116433-PRSCE-SM-22mar22."
                     /isolation_source="Prosce lake"
                     /db_xref="taxon:210512"
                     /environmental_sample
                     /geo_loc_name="Croatia"
                     /collection_date="2022-03-22"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBABVY010000001-CBABVY010000169
WGS_SCAFLD  NZ_CBABVY010000001-NZ_CBABVY010000169
//
LOCUS       NZ_CBARJT010000000   4926751 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Reyranella sp. isolate
            PELAGICS-MAG-x7-bin061025-MEDDE-SM-14apr20., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBARJT000000000
VERSION     NZ_CBARJT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117450833
            Assembly: GCF_964778075.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Reyranella sp. (freshwater metagenome)
  ORGANISM  Reyranella sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Reyranellaceae; Reyranella.
REFERENCE   1  (bases 1 to 4926751)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-DEC-2024) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBARJT000000000.1.
            The Reyranella sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBARJT000000000.  This version of the project
            (01) has the accession number NZ_CBARJT010000000, and consists of
            sequences CBARJT010000001-CBARJT010000329.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964778075.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 01:41:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,117
            CDSs (total)                      :: 5,068
            Genes (coding)                    :: 4,988
            CDSs (with protein)               :: 4,988
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 4 of 80
            Pseudo Genes (incomplete)         :: 76 of 80
            Pseudo Genes (internal stop)      :: 3 of 80
            Pseudo Genes (multiple problems)  :: 3 of 80
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4926751
                     /organism="Reyranella sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-x7-bin061025-MEDDE-SM-14apr20."
                     /isolation_source="Medard lake"
                     /db_xref="taxon:1929291"
                     /environmental_sample
                     /geo_loc_name="Czechia"
                     /collection_date="2020-04-14"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBARJT010000001-CBARJT010000329
WGS_SCAFLD  NZ_CBARJT010000001-NZ_CBARJT010000329
//
LOCUS       NZ_JMKP01000000      3098053 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Psychrobacter phenylpyruvicus DSM 7000 = NBRC 102152 strain DSM
            7000, whole genome shotgun sequencing project.
ACCESSION   NZ_JMKP00000000
VERSION     NZ_JMKP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02743348
            Assembly: GCF_000685805.1
KEYWORDS    WGS; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Psychrobacter phenylpyruvicus DSM 7000 = NBRC 102152
  ORGANISM  Psychrobacter phenylpyruvicus DSM 7000 = NBRC 102152
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Psychrobacter.
REFERENCE   1  (bases 1 to 3098053)
  AUTHORS   Kyrpides,N., Huntemann,M., Han,J., Chen,A., Mavromatis,K.,
            Markowitz,V., Palaniappan,K., Ivanova,N., Schaumberg,A., Pati,A.,
            Liolios,K., Nordberg,H.P., Cantor,M.N., Hua,S.X. and Woyke,T.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2014) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JMKP00000000.1.
            The Psychrobacter phenylpyruvicus DSM 7000 = NBRC 102152 whole
            genome shotgun (WGS) project has the project accession
            NZ_JMKP00000000.  This version of the project (01) has the
            accession number NZ_JMKP01000000, and consists of sequences
            JMKP01000001-JMKP01000106.
            URL -- http://www.jgi.doe.gov
            JGI Project ID: 1010776
            Source DNA and organism available from Hans-Peter Klenk at the
            German Collection of Microorganisms and Cell Cultures (DSMZ)
            (hans-peter.klenk@dsmz.de)
            Contacts: Nikos   Kyrpides (nckyrpides@lbl.gov)
                      Tanja Woyke (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI
            Annotation by JGI
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376)
            Full annotations are available from IMG.
            
            ##MIGS-Data-START##
            environment         :: Host; Human
            investigation_type  :: bacteria_archaea
            project_name        :: Psychrobacter phenylpyruvicus DSM 7000
            sequencing_meth     :: WGS
            ref_biomaterial     :: DSM 7000
            rel_to_oxygen       :: Aerobe
            finishing_strategy  :: Level 1: Standard Draft
            GOLD Stamp ID       :: Gi11845
            Type Strain         :: Yes
            Funding Program     :: DOE-CSP 2012
            Gene Calling Method :: Prodigal 2.5
            Isolation Site      :: Human blood
            Cell Shape          :: Rod-shaped
            Motility            :: Nonmotile
            Sporulation         :: Nonsporulating
            Temperature Range   :: Psychrotolerant
            Temperature Optimum :: 33-37 C
            Gram Staining       :: Gram-
            Phenotypes          :: Catalase positive
            ##MIGS-Data-END##
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: Unknown program v. before 2014-04-08
            Genome Coverage          :: Unknown
            Sequencing Technology    :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000685805.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 09:58:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,669
            CDSs (total)                      :: 2,615
            Genes (coding)                    :: 2,554
            CDSs (with protein)               :: 2,554
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 12 of 61
            Pseudo Genes (incomplete)         :: 52 of 61
            Pseudo Genes (internal stop)      :: 2 of 61
            Pseudo Genes (multiple problems)  :: 4 of 61
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3098053
                     /organism="Psychrobacter phenylpyruvicus DSM 7000 = NBRC
                     102152"
                     /mol_type="genomic DNA"
                     /strain="DSM 7000"
                     /culture_collection="DSM:7000"
                     /type_material="type strain of Psychrobacter
                     phenylpyruvicus"
                     /db_xref="taxon:1123034"
WGS         JMKP01000001-JMKP01000106
WGS_SCAFLD  NZ_JMKP01000001-NZ_JMKP01000106
//
LOCUS       NZ_AMZF01000000      3916977 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pusillimonas noertemannii BS8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AMZF00000000
VERSION     NZ_AMZF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN01164170
            Assembly: GCF_000308195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pusillimonas noertemannii BS8
  ORGANISM  Pusillimonas noertemannii BS8
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Pusillimonas.
REFERENCE   1  (bases 1 to 3916977)
  AUTHORS   Stabler,R.A., Negus,D., Pain,A. and Taylor,P.W.
  TITLE     Genome sequences of Pseudomonas fluorescens BS2 and Pusillimonas
            noertemannii BS8, soil bacteria that cooperate to degrade the
            poly-gamma-D-glutamic acid anthrax capsule
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3916977)
  AUTHORS   Stabler,R.A., Negus,D., Pain,A. and Taylor,P.W.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2012) Faculty of Infectious & Tropical Diseases,
            Dept. of Pathogen Molecular Biology, London School of Hygiene &
            Tropical Medicine, Keppel Street, London WC1E 7HT, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AMZF00000000.1.
            The Pusillimonas noertemannii BS8 whole genome shotgun (WGS)
            project has the project accession NZ_AMZF00000000.  This version of
            the project (01) has the accession number NZ_AMZF01000000, and
            consists of sequences AMZF01000001-AMZF01000121.
            Bacteria available from Peter Taylor, School of Pharmacy, London
            School of Hygiene & Tropical Medicine, London WC1E 7HT, United
            Kingdom.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.09
            Assembly Name         :: PusiNoerBS8
            Genome Coverage       :: 300.0x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000308195.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:11:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,685
            CDSs (total)                      :: 3,635
            Genes (coding)                    :: 3,589
            CDSs (with protein)               :: 3,589
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 5 of 46
            Pseudo Genes (incomplete)         :: 42 of 46
            Pseudo Genes (internal stop)      :: 2 of 46
            Pseudo Genes (multiple problems)  :: 3 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3916977
                     /organism="Pusillimonas noertemannii BS8"
                     /mol_type="genomic DNA"
                     /strain="BS8"
                     /isolation_source="soil"
                     /db_xref="taxon:1231391"
                     /geo_loc_name="United Kingdom"
                     /collection_date="Feb-2009"
WGS         AMZF01000001-AMZF01000121
WGS_SCAFLD  NZ_AMZF01000001-NZ_AMZF01000121
//
LOCUS       NZ_JAME01000000      4898228 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Roseivivax isoporae LMG 25204, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAME00000000
VERSION     NZ_JAME00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02641562
            Assembly: GCF_000521865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Roseivivax isoporae LMG 25204
  ORGANISM  Roseivivax isoporae LMG 25204
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Roseivivax.
REFERENCE   1  (bases 1 to 4898228)
  AUTHORS   Li,G., Lai,Q., Liu,X., Sun,F. and Shao,Z.
  TITLE     Roseivivax atlanticus sp. nov., isolated from surface seawater of
            the Atlantic Ocean
  JOURNAL   Antonie Van Leeuwenhoek 105 (5), 863-869 (2014)
   PUBMED   24567080
REFERENCE   2  (bases 1 to 4898228)
  AUTHORS   Lai,Q., Li,G. and Shao,Z.
  TITLE     Roseivivax isoporae LMG 25204 Genome Sequencing
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 4898228)
  AUTHORS   Lai,Q., Li,G. and Shao,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JAN-2014) The Third Institute of State Oceanic
            Administration, State of Oceanic Administration (SOA), 178 Daxue
            Road, Xiamen, Fujian 361005, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAME00000000.1.
            The Roseivivax isoporae LMG 25204 whole genome shotgun (WGS)
            project has the project accession NZ_JAME00000000.  This version of
            the project (01) has the accession number NZ_JAME01000000, and
            consists of sequences JAME01000001-JAME01000203.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria available from LMG 25204, it can be bought from LMG
            (http://bccm.belspo.be/index.php).
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 1.05
            Genome Coverage       :: 100x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000521865.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:09:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,768
            Genes (coding)                    :: 4,694
            CDSs (with protein)               :: 4,694
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 43
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 11 of 74
            Pseudo Genes (incomplete)         :: 69 of 74
            Pseudo Genes (internal stop)      :: 1 of 74
            Pseudo Genes (multiple problems)  :: 6 of 74
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4898228
                     /organism="Roseivivax isoporae LMG 25204"
                     /mol_type="genomic DNA"
                     /strain="LMG 25204"
                     /culture_collection="LMG:25204"
                     /type_material="type strain of Roseivivax isoporae"
                     /db_xref="taxon:1449351"
WGS         JAME01000001-JAME01000203
WGS_SCAFLD  NZ_JAME01000001-NZ_JAME01000203
//
LOCUS       NZ_AQOF01000000      3379634 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Salinivibrio costicola subsp. costicola ATCC 33508 = LMG 11651,
            whole genome shotgun sequencing project.
ACCESSION   NZ_AQOF00000000
VERSION     NZ_AQOF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02597457
            Assembly: GCF_000565345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salinivibrio costicola subsp. costicola ATCC 33508 = LMG 11651
  ORGANISM  Salinivibrio costicola subsp. costicola ATCC 33508 = LMG 11651
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Salinivibrio.
REFERENCE   1  (bases 1 to 3379634)
  AUTHORS   Gorriti,M.F., Dias,G.M., Chimetto,L.A., Trindade-Silva,A.E.,
            Silva,B.S., Mesquita,M.M.A., Gregoracci,G.B., Farias,M.E.,
            Thompson,C.C. and Thompson,F.L.
  TITLE     Genomic and phenotypic attributes of Salinivibrios from
            stromatolites, sediment and water of the high altitude Andean Lake
            Socompa
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3379634)
  AUTHORS   Gorriti,M.F., Dias,G.M., Chimetto,L.A., Trindade-Silva,A.E.,
            Silva,B.S., Mesquita,M.M.A., Gregoracci,G.B., Farias,M.E.,
            Thompson,C.C. and Thompson,F.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-APR-2013) Universidade Federal do Rio de Janeiro, Av.
            Carlos Chagas Filho, 373 CCS - IB Dept. BIOMAR - Lab de
            Microbioligia- Bloco A (Anexo) Sala A3-202 / Cidade Universitaria,
            Rio de Janeiro 21941-599, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AQOF00000000.1.
            The Salinivibrio costicola subsp. costicola ATCC 33508 = LMG 11651
            whole genome shotgun (WGS) project has the project accession
            NZ_AQOF00000000.  This version of the project (01) has the
            accession number NZ_AQOF01000000, and consists of sequences
            AQOF01000001-AQOF01000202.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 3
            Assembly Name         :: costicolaLMG11651
            Genome Coverage       :: 29.0x
            Sequencing Technology :: IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000565345.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:10:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,509
            CDSs (total)                      :: 3,407
            Genes (coding)                    :: 2,608
            CDSs (with protein)               :: 2,608
            Genes (RNA)                       :: 102
            rRNAs                             :: 7, 6, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 23S)
            partial rRNAs                     :: 2, 6, 7 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 799
            CDSs (without protein)            :: 799
            Pseudo Genes (ambiguous residues) :: 0 of 799
            Pseudo Genes (frameshifted)       :: 653 of 799
            Pseudo Genes (incomplete)         :: 157 of 799
            Pseudo Genes (internal stop)      :: 32 of 799
            Pseudo Genes (multiple problems)  :: 42 of 799
            CRISPR Arrays                     :: 6
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3379634
                     /organism="Salinivibrio costicola subsp. costicola ATCC
                     33508 = LMG 11651"
                     /mol_type="genomic DNA"
                     /strain="LMG 11651"
                     /isolation_source="sediment of Socompa Lake"
                     /sub_species="costicola"
                     /type_material="type strain of Vibrio costicola"
                     /db_xref="taxon:1269942"
                     /geo_loc_name="Argentina"
                     /collection_date="2011-02"
WGS         AQOF01000001-AQOF01000202
WGS_SCAFLD  NZ_AQOF01000001-NZ_AQOF01000202
//
LOCUS       NZ_CDQH01000000      5003450 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Shewanella algae strain MARS 14, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CDQH00000000
VERSION     NZ_CDQH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3221090
            Assembly: GCF_000947195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Shewanella algae
  ORGANISM  Shewanella algae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
REFERENCE   1
  AUTHORS   Urmite Genomes Urmite,Genomes.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JAN-2015) URMITE, 27 Bd J Moulin, 13385 Marseille
            Cedex 05, France, 13385, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDQH00000000.1.
            The Shewanella algae whole genome shotgun (WGS) project has the
            project accession NZ_CDQH00000000.  This version of the project
            (01) has the accession number NZ_CDQH01000000, and consists of
            sequences CDQH01000001-CDQH01000025.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000947195.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:09:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,477
            CDSs (total)                      :: 4,358
            Genes (coding)                    :: 4,287
            CDSs (with protein)               :: 4,287
            Genes (RNA)                       :: 119
            rRNAs                             :: 6, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 104
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 26 of 71
            Pseudo Genes (incomplete)         :: 55 of 71
            Pseudo Genes (internal stop)      :: 9 of 71
            Pseudo Genes (multiple problems)  :: 17 of 71
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5003450
                     /organism="Shewanella algae"
                     /mol_type="genomic DNA"
                     /strain="MARS 14"
                     /db_xref="taxon:38313"
WGS         CDQH01000001-CDQH01000025
WGS_SCAFLD  NZ_LN810009-NZ_LN810019
//
LOCUS       NZ_FNRV01000000      6592588 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas mohnii strain DSM 18327, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNRV00000000
VERSION     NZ_FNRV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05216205
            Assembly: GCF_900105115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas mohnii
  ORGANISM  Pseudomonas mohnii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNRV00000000.1.
            The Pseudomonas mohnii whole genome shotgun (WGS) project has the
            project accession NZ_FNRV00000000.  This version of the project
            (01) has the accession number NZ_FNRV01000000, and consists of
            sequences FNRV01000001-FNRV01000002.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900105115.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:55:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,123
            CDSs (total)                      :: 6,027
            Genes (coding)                    :: 5,902
            CDSs (with protein)               :: 5,902
            Genes (RNA)                       :: 96
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 125
            CDSs (without protein)            :: 125
            Pseudo Genes (ambiguous residues) :: 0 of 125
            Pseudo Genes (frameshifted)       :: 36 of 125
            Pseudo Genes (incomplete)         :: 98 of 125
            Pseudo Genes (internal stop)      :: 14 of 125
            Pseudo Genes (multiple problems)  :: 19 of 125
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6592588
                     /organism="Pseudomonas mohnii"
                     /mol_type="genomic DNA"
                     /strain="DSM 18327"
                     /type_material="type strain of Pseudomonas mohnii"
                     /db_xref="taxon:395600"
WGS         FNRV01000001-FNRV01000002
WGS_SCAFLD  NZ_FNRV01000001-NZ_FNRV01000002
//
LOCUS       NZ_CANI01000000      6453427 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Rhizobium mesoamericanum STM3625, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CANI00000000
VERSION     NZ_CANI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2272470
            Assembly: GCF_000312665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rhizobium mesoamericanum STM3625
  ORGANISM  Rhizobium mesoamericanum STM3625
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Rhizobium.
REFERENCE   1
  AUTHORS   Moulin,L., Mornico,D., Melkonian,R. and Klonowska,A.
  TITLE     Draft Genome Sequence of Rhizobium mesoamericanum STM3625, a
            Nitrogen-Fixing Symbiont of Mimosa pudica Isolated in French Guiana
            (South America)
  JOURNAL   Genome Announc 1 (1) (2013)
   PUBMED   23405314
REFERENCE   2  (bases 1 to 6453427)
  AUTHORS   Genoscope -,C.E.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-SEP-2012) Genoscope / CEA (Commissariat # l'#nergie
            atomique et aux #nergies alternatives): BP 191 91006 EVRY cedex -
            FRANCE (E-mail: seqref@genoscope.cns.fr - Web:
            www.genoscope.cns.fr)
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CANI00000000.1.
            The Rhizobium mesoamericanum STM3625 whole genome shotgun (WGS)
            project has the project accession NZ_CANI00000000.  This version of
            the project (01) has the accession number NZ_CANI01000000, and
            consists of sequences CANI01000001-CANI01000092.
            Annotation results relative to BLAST similarities, COG
            assignations, enzymatic function prediction (PRIAM software),
            TMHMM, PsortB and SignalP predictions, and synteny conservation
            (Syntonizer software) are available in the MicroScope annotation
            platform
            http://www.genoscope.cns.fr/agc/microscope.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000312665.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:19:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,312
            CDSs (total)                      :: 6,259
            Genes (coding)                    :: 5,958
            CDSs (with protein)               :: 5,958
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 301
            CDSs (without protein)            :: 301
            Pseudo Genes (ambiguous residues) :: 0 of 301
            Pseudo Genes (frameshifted)       :: 173 of 301
            Pseudo Genes (incomplete)         :: 230 of 301
            Pseudo Genes (internal stop)      :: 39 of 301
            Pseudo Genes (multiple problems)  :: 121 of 301
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6453427
                     /organism="Rhizobium mesoamericanum STM3625"
                     /mol_type="genomic DNA"
                     /strain="STM3625"
                     /db_xref="taxon:1211777"
WGS         CANI01000001-CANI01000092
WGS_SCAFLD  NZ_HF536772-NZ_HF536778
//
LOCUS       NZ_FOQL01000000      4149427 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas guineae strain LMG 24016, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOQL00000000
VERSION     NZ_FOQL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05216206
            Assembly: GCF_900113745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas guineae
  ORGANISM  Pseudomonas guineae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOQL00000000.1.
            The Pseudomonas guineae whole genome shotgun (WGS) project has the
            project accession NZ_FOQL00000000.  This version of the project
            (01) has the accession number NZ_FOQL01000000, and consists of
            sequences FOQL01000001-FOQL01000010.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900113745.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:55:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,878
            CDSs (total)                      :: 3,819
            Genes (coding)                    :: 3,766
            CDSs (with protein)               :: 3,766
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 14 of 53
            Pseudo Genes (incomplete)         :: 40 of 53
            Pseudo Genes (internal stop)      :: 7 of 53
            Pseudo Genes (multiple problems)  :: 7 of 53
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4149427
                     /organism="Pseudomonas guineae"
                     /mol_type="genomic DNA"
                     /strain="LMG 24016"
                     /type_material="type strain of Pseudomonas guineae"
                     /db_xref="taxon:425504"
WGS         FOQL01000001-FOQL01000010
WGS_SCAFLD  NZ_FOQL01000001-NZ_FOQL01000010
//
LOCUS       NZ_FNTZ01000000      4922895 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas coleopterorum strain LMG 28558, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNTZ00000000
VERSION     NZ_FNTZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05216510
            Assembly: GCF_900105555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas coleopterorum
  ORGANISM  Pseudomonas coleopterorum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNTZ00000000.1.
            The Pseudomonas coleopterorum whole genome shotgun (WGS) project
            has the project accession NZ_FNTZ00000000.  This version of the
            project (01) has the accession number NZ_FNTZ01000000, and consists
            of sequences FNTZ01000001-FNTZ01000002.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900105555.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:01:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,462
            CDSs (total)                      :: 4,371
            Genes (coding)                    :: 4,310
            CDSs (with protein)               :: 4,310
            Genes (RNA)                       :: 91
            rRNAs                             :: 7, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 5 of 61
            Pseudo Genes (incomplete)         :: 55 of 61
            Pseudo Genes (internal stop)      :: 5 of 61
            Pseudo Genes (multiple problems)  :: 3 of 61
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4922895
                     /organism="Pseudomonas coleopterorum"
                     /mol_type="genomic DNA"
                     /strain="LMG 28558"
                     /type_material="type strain of Pseudomonas coleopterorum"
                     /db_xref="taxon:1605838"
WGS         FNTZ01000001-FNTZ01000002
WGS_SCAFLD  NZ_FNTZ01000001-NZ_FNTZ01000002
//
LOCUS       NZ_JALZ01000000      4492810 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Roseivivax halodurans JCM 10272, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JALZ00000000
VERSION     NZ_JALZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02597438
            Assembly: GCF_000521785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Roseivivax halodurans JCM 10272
  ORGANISM  Roseivivax halodurans JCM 10272
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Roseivivax.
REFERENCE   1  (bases 1 to 4492810)
  AUTHORS   Li,G., Lai,Q., Liu,X., Sun,F. and Shao,Z.
  TITLE     Roseivivax atlanticus sp. nov., isolated from surface seawater of
            the Atlantic Ocean
  JOURNAL   Antonie Van Leeuwenhoek 105 (5), 863-869 (2014)
   PUBMED   24567080
REFERENCE   2  (bases 1 to 4492810)
  AUTHORS   Lai,Q., Li,G. and Shao,Z.
  TITLE     Roseivivax halodurans JCM 10272 Genome Sequencing
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 4492810)
  AUTHORS   Lai,Q., Li,G. and Shao,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JAN-2014) The Third Institute of State Oceanic
            Administration, State of Oceanic Administration (SOA), 178 Daxue
            Road, Xiamen, Fujian 361005, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALZ00000000.1.
            The Roseivivax halodurans JCM 10272 whole genome shotgun (WGS)
            project has the project accession NZ_JALZ00000000.  This version of
            the project (01) has the accession number NZ_JALZ01000000, and
            consists of sequences JALZ01000001-JALZ01000150.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria available from JCM 10272, it can be bought from JCM
            O#ahttp://www.jcm.riken.go.jp/O#a.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 1.05
            Genome Coverage       :: 100x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000521785.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:18:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,429
            CDSs (total)                      :: 4,345
            Genes (coding)                    :: 4,243
            CDSs (with protein)               :: 4,243
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 77
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 103
            CDSs (without protein)            :: 102
            Pseudo Genes (ambiguous residues) :: 0 of 103
            Pseudo Genes (frameshifted)       :: 34 of 103
            Pseudo Genes (incomplete)         :: 79 of 103
            Pseudo Genes (internal stop)      :: 14 of 103
            Pseudo Genes (multiple problems)  :: 22 of 103
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4492810
                     /organism="Roseivivax halodurans JCM 10272"
                     /mol_type="genomic DNA"
                     /strain="JCM 10272"
                     /culture_collection="JCM:10272"
                     /type_material="type strain of Roseivivax halodurans"
                     /db_xref="taxon:1449350"
WGS         JALZ01000001-JALZ01000150
WGS_SCAFLD  NZ_JALZ01000001-NZ_JALZ01000150
//
LOCUS       NZ_ACZI02000000      3587529 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Segniliparus rugosus ATCC BAA-974, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ACZI00000000
VERSION     NZ_ACZI00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02463810
            Assembly: GCF_000185725.2
KEYWORDS    WGS; NONCONTIGUOUS_FINISHED; RefSeq.
SOURCE      Segniliparus rugosus ATCC BAA-974
  ORGANISM  Segniliparus rugosus ATCC BAA-974
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Segniliparaceae; Segniliparus.
REFERENCE   1  (bases 1 to 3587529)
  AUTHORS   Earl,A.M., Desjardins,C.A., Fitzgerald,M.G., Arachchi,H.M.,
            Zeng,Q., Mehta,T., Griggs,A., Birren,B.W., Toney,N.C., Carr,J.,
            Posey,J. and Butler,W.R.
  TITLE     High quality draft genome sequence of Segniliparus rugosus CDC
            945(T)= (ATCC BAA-974(T))
  JOURNAL   Stand Genomic Sci 5 (3), 389-397 (2011)
   PUBMED   22675588
REFERENCE   2  (bases 1 to 3587529)
  AUTHORS   Earl,A., Ward,D., Feldgarden,M., Gevers,D., Butler,R., Walker,B.,
            Young,S., Zeng,Q., Gargeya,S., Fitzgerald,M., Haas,B.,
            Abouelleil,A., Allen,A.W., Alvarado,L., Arachchi,H.M., Berlin,A.M.,
            Chapman,S.B., Gainer-Dewar,J., Goldberg,J., Griggs,A., Gujja,S.,
            Hansen,M., Howarth,C., Imamovic,A., Ireland,A., Larimer,J.,
            McCowan,C., Murphy,C., Pearson,M., Poon,T.W., Priest,M.,
            Roberts,A., Saif,S., Shea,T., Sisk,P., Sykes,S., Wortman,J.,
            Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genomics Platform
  TITLE     The Genome Sequence of Segniliparus rugosus CDC 945
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 3587529)
  AUTHORS   Earl,A., Ward,D., Feldgarden,M., Gevers,D., Butler,R., Walker,B.,
            Young,S., Zeng,Q., Gargeya,S., Fitzgerald,M., Haas,B.,
            Abouelleil,A., Allen,A.W., Alvarado,L., Arachchi,H.M., Berlin,A.M.,
            Chapman,S.B., Gainer-Dewar,J., Goldberg,J., Griggs,A., Gujja,S.,
            Hansen,M., Howarth,C., Imamovic,A., Ireland,A., Larimer,J.,
            McCowan,C., Murphy,C., Pearson,M., Poon,T.W., Priest,M.,
            Roberts,A., Saif,S., Shea,T., Sisk,P., Sykes,S., Wortman,J.,
            Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genomics Platform
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2013) Broad Institute of MIT and Harvard, 7
            Cambridge Center, Cambridge, MA 02142, USA
REFERENCE   4  (bases 1 to 3587529)
  AUTHORS   Earl,A., Ward,D., Feldgarden,M., Gevers,D., Butler,R., Young,S.K.,
            Zeng,Q., Gargeya,S., Fitzgerald,M., Haas,B., Abouelleil,A.,
            Alvarado,L., Arachchi,H.M., Berlin,A., Brown,A., Chapman,S.B.,
            Chen,Z., Dunbar,C., Freedman,E., Gearin,G., Gellesch,M.,
            Goldberg,J., Griggs,A., Gujja,S., Heilman,E., Heiman,D.,
            Howarth,C., Larson,L., Lui,A., MacDonald,P.J.P., Mehta,T.,
            Montmayeur,A., Murphy,C., Neiman,D., Pearson,M., Priest,M.,
            Roberts,A., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C.,
            Sykes,S., White,J., Yandava,C., Wortman,J., Nusbaum,C. and
            Birren,B.
  CONSRTM   The Broad Institute Genome Sequencing Platform
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2010) Broad Institute of MIT and Harvard, 7
            Cambridge Center, Cambridge, MA 02142, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ACZI00000000.2.
            
            On Sep 16, 2013 this sequence version replaced NZ_ACZI00000000.1.
            The Segniliparus rugosus ATCC BAA-974 whole genome shotgun (WGS)
            project has the project accession NZ_ACZI00000000.  This version of
            the project (02) has the accession number NZ_ACZI02000000, and
            consists of sequences ACZI02000001-ACZI02000003.
            This is a reference genome for the Human Microbiome Project. This
            project is co-owned with the Human Microbiome Project DACC.
            Source DNA provided by Butler, R. (Centers for Disease Control and
            Prevention, USA).
            Bacteria provided by Butler, R. (Centers for Disease Control and
            Prevention, USA).
            Please be aware that the annotation is done automatically with
            little or no manual curation.
            Gene Calling Method: Prodigal.
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Finished
            Current Finishing Status :: Noncontiguous Finished
            Assembly Method          :: Newbler v. 2.3-PostRelease-11/19/2009
            Assembly Name            :: Segn_rugo_CDC_945_V2
            Genome Coverage          :: 13.0x
            Sequencing Technology    :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000185725.2-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:10:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,545
            CDSs (total)                      :: 3,491
            Genes (coding)                    :: 3,397
            CDSs (with protein)               :: 3,397
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 94
            CDSs (without protein)            :: 94
            Pseudo Genes (ambiguous residues) :: 0 of 94
            Pseudo Genes (frameshifted)       :: 53 of 94
            Pseudo Genes (incomplete)         :: 42 of 94
            Pseudo Genes (internal stop)      :: 3 of 94
            Pseudo Genes (multiple problems)  :: 4 of 94
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3587529
                     /organism="Segniliparus rugosus ATCC BAA-974"
                     /mol_type="genomic DNA"
                     /strain="ATCC BAA-974"
                     /isolation_source="biological product [ENVO:02000043]"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:BAA-974"
                     /type_material="type strain of Segniliparus rugosus"
                     /db_xref="HMP:9336"
                     /db_xref="taxon:679197"
WGS         ACZI02000001-ACZI02000003
WGS_SCAFLD  NZ_KI391953-NZ_KI391954
//
LOCUS       NZ_FOFP01000000      5348513 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas cuatrocienegasensis strain CIP 109853, whole genome
            shotgun sequencing project.
ACCESSION   NZ_FOFP00000000
VERSION     NZ_FOFP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05216600
            Assembly: GCF_900110925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas cuatrocienegasensis
  ORGANISM  Pseudomonas cuatrocienegasensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOFP00000000.1.
            The Pseudomonas cuatrocienegasensis whole genome shotgun (WGS)
            project has the project accession NZ_FOFP00000000.  This version of
            the project (01) has the accession number NZ_FOFP01000000, and
            consists of sequences FOFP01000001-FOFP01000050.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900110925.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:07:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,952
            CDSs (total)                      :: 4,887
            Genes (coding)                    :: 4,772
            CDSs (with protein)               :: 4,772
            Genes (RNA)                       :: 65
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 2 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 17 of 115
            Pseudo Genes (incomplete)         :: 97 of 115
            Pseudo Genes (internal stop)      :: 12 of 115
            Pseudo Genes (multiple problems)  :: 11 of 115
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5348513
                     /organism="Pseudomonas cuatrocienegasensis"
                     /mol_type="genomic DNA"
                     /strain="CIP 109853"
                     /type_material="type strain of Pseudomonas
                     cuatrocienegasensis"
                     /db_xref="taxon:543360"
WGS         FOFP01000001-FOFP01000050
WGS_SCAFLD  NZ_FOFP01000001-NZ_FOFP01000050
//
LOCUS       NZ_ADBY01000000      5125678 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Serratia odorifera DSM 4582, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ADBY00000000
VERSION     NZ_ADBY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00120576
            Assembly: GCF_000163595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Serratia odorifera DSM 4582
  ORGANISM  Serratia odorifera DSM 4582
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (bases 1 to 5125678)
  AUTHORS   Muzny,D., Qin,X., Deng,J., Jiang,H., Liu,Y., Qu,J., Song,X.-Z.,
            Zhang,L., Thornton,R., Coyle,M., Francisco,L., Jackson,L.,
            Javaid,M., Korchina,V., Kovar,C., Mata,R., Mathew,T., Ngo,R.,
            Nguyen,L., Nguyen,N., Okwuonu,G., Ongeri,F., Pham,C., Simmons,D.,
            Wilczek-Boney,K., Hale,W., Jakkamsetti,A., Pham,P., Ruth,R., San
            Lucas,F., Warren,J., Zhang,J., Zhao,Z., Zhou,C., Zhu,D., Lee,S.,
            Bess,C., Blankenburg,K., Forbes,L., Fu,Q., Gubbala,S., Hirani,K.,
            Jayaseelan,J.C., Lara,F., Munidasa,M., Palculict,T., Patil,S.,
            Pu,L.-L., Saada,N., Tang,L., Weissenberger,G., Zhu,Y., Hemphill,L.,
            Shang,Y., Youmans,B., Ayvaz,T., Ross,M., Santibanez,J., Aqrawi,P.,
            Gross,S., Joshi,V., Fowler,G., Nazareth,L., Reid,J., Worley,K.,
            Petrosino,J., Highlander,S. and Gibbs,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JAN-2010) Human Genome Sequencing Center, Baylor
            College of Medicine, One Baylor Plaza, Houston, TX 77030, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADBY00000000.1.
            The Serratia odorifera DSM 4582 whole genome shotgun (WGS) project
            has the project accession NZ_ADBY00000000.  This version of the
            project (01) has the accession number NZ_ADBY01000000, and consists
            of sequences ADBY01000001-ADBY01000091.
            This sequence is generated as a part of the Human Microbiome
            Project (HMP), funded by the National Institutes of Health (NIH),
            National Human Genome Research Institute (NHGRI) Large-Scale
            Sequencing Research Network and the National Institute of Allergy
            and Infectious Diseases (NIAID) Microbial Genome Sequencing Centers
            Program.  The mission of the HMP is to generate resources to enable
            the characterization of the human microbiota, the microbial
            communities living within human bodies, and analyze the role of
            these organisms in human health and disease.  See
            http://www.hmpdacc.org/ for more information.
            
             The sequenced strain was obtained from ATCC.  The genomic DNA was
            prepared from a single bacterial isolate.  The sequence generated
            included at least 10 fold coverage of Roche/454 Lifesciences FLX
            fragment data and at least 8 fold clone coverage of Roche/454
            Lifesciences paired-end data. The Roche/454 Lifesciences sequence
            was assembled using the Roche/454 Lifescience Newbler assembler.
            The contigs from the Newbler assembly were aligned with mapping
            tools such as Mosaic and Crossmatch and these data were used for
            error correction for this version of the draft assembly. This draft
            assembly meets the HMP draft quality standards (more than 90% of
            the genome is included in contigs, more than 90% of a core set of
            bacterial genes are found with > 30% identity and > 30% length;
            more than 90% of the bases in the assembly have more than 5 fold
            sequence coverage, the contig N50 length is greater than 5kb, the
            scaffold N50 length is greater than 20kb, and there is less than 1
            gap per 5kb).
            
            This is a reference genome for the Human Microbiome Project.
            This project is co-owned with the Human Microbiome Project DACC.
            Genome Coverage: 11x
            Sequencing Technology: 454; ABI.
            Product names were updated in June 2013.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000163595.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:25:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,942
            CDSs (total)                      :: 4,859
            Genes (coding)                    :: 4,691
            CDSs (with protein)               :: 4,691
            Genes (RNA)                       :: 83
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 168
            CDSs (without protein)            :: 168
            Pseudo Genes (ambiguous residues) :: 0 of 168
            Pseudo Genes (frameshifted)       :: 112 of 168
            Pseudo Genes (incomplete)         :: 58 of 168
            Pseudo Genes (internal stop)      :: 10 of 168
            Pseudo Genes (multiple problems)  :: 10 of 168
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5125678
                     /organism="Serratia odorifera DSM 4582"
                     /mol_type="genomic DNA"
                     /strain="DSM 4582"
                     /isolation_source="biological product [ENVO:02000043]"
                     /host="Homo sapiens"
                     /culture_collection="DSM:4582"
                     /type_material="type strain of Serratia odorifera"
                     /db_xref="taxon:667129"
WGS         ADBY01000001-ADBY01000091
WGS_SCAFLD  NZ_GG753567-NZ_GG753599
//
LOCUS       NZ_FNUD01000000      5096762 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas deceptionensis strain LMG 25555, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNUD00000000
VERSION     NZ_FNUD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04489800
            Assembly: GCF_900106095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas deceptionensis
  ORGANISM  Pseudomonas deceptionensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNUD00000000.1.
            The Pseudomonas deceptionensis whole genome shotgun (WGS) project
            has the project accession NZ_FNUD00000000.  This version of the
            project (01) has the accession number NZ_FNUD01000000, and consists
            of sequences FNUD01000001-FNUD01000002.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900106095.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:09:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,700
            CDSs (total)                      :: 4,602
            Genes (coding)                    :: 4,542
            CDSs (with protein)               :: 4,542
            Genes (RNA)                       :: 98
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 21 of 60
            Pseudo Genes (incomplete)         :: 46 of 60
            Pseudo Genes (internal stop)      :: 6 of 60
            Pseudo Genes (multiple problems)  :: 10 of 60
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5096762
                     /organism="Pseudomonas deceptionensis"
                     /mol_type="genomic DNA"
                     /strain="LMG 25555"
                     /type_material="type strain of Pseudomonas deceptionensis"
                     /db_xref="taxon:882211"
WGS         FNUD01000001-FNUD01000002
WGS_SCAFLD  NZ_FNUD01000001-NZ_FNUD01000002
//
LOCUS       NZ_MLHH01000000      2033092 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Rodentibacter heidelbergensis strain Ac69, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MLHH00000000
VERSION     NZ_MLHH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05892232
            Assembly: GCF_002000125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rodentibacter heidelbergensis
  ORGANISM  Rodentibacter heidelbergensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Rodentibacter.
REFERENCE   1  (bases 1 to 2033092)
  AUTHORS   Christensen,H.
  TITLE     Rodentibacter gen. nov. and new species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2033092)
  AUTHORS   Christensen,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2016) Veterinary Disease Biology, University of
            Copenhagen, Stigbojlen 4, Frederiksberg 1870, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLHH00000000.1.
            The Rodentibacter heidelbergensis whole genome shotgun (WGS)
            project has the project accession NZ_MLHH00000000.  This version of
            the project (01) has the accession number NZ_MLHH01000000, and
            consists of sequences MLHH01000001-MLHH01000034.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomic Workbench v. 9
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002000125.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:40:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,977
            CDSs (total)                      :: 1,920
            Genes (coding)                    :: 1,891
            CDSs (with protein)               :: 1,891
            Genes (RNA)                       :: 57
            rRNAs                             :: 5, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 25 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2033092
                     /organism="Rodentibacter heidelbergensis"
                     /mol_type="genomic DNA"
                     /strain="Ac69"
                     /isolation_source="Lung"
                     /host="Rat"
                     /type_material="type strain of Rodentibacter
                     heidelbergensis"
                     /db_xref="taxon:1908258"
                     /geo_loc_name="Germany"
                     /collection_date="1995"
                     /collected_by="Warner Nicklas"
WGS         MLHH01000001-MLHH01000034
WGS_SCAFLD  NZ_MLHH01000001-NZ_MLHH01000034
//
LOCUS       NZ_MDGK01000000      6345609 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas extremorientalis strain LMG 19695, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MDGK00000000
VERSION     NZ_MDGK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05561041
            Assembly: GCF_001870465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas extremorientalis
  ORGANISM  Pseudomonas extremorientalis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6345609)
  AUTHORS   Tambong,J.T.
  TITLE     Draft genome sequence of the type strain of Pseudomonas
            extremorientalis LMG 19695T isolated from drinking water reservoir
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6345609)
  AUTHORS   Tambong,J.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-AUG-2016) Agriculture and Agri-Food Canada, Ottawa
            Research and Development Centre, 960 Carling Avenue, Ottawa,
            Ontario K1A 0C6, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MDGK00000000.1.
            The Pseudomonas extremorientalis whole genome shotgun (WGS) project
            has the project accession NZ_MDGK00000000.  This version of the
            project (01) has the accession number NZ_MDGK01000000, and consists
            of sequences MDGK01000001-MDGK01000063.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: ABySS v. 1.5.2
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 49.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001870465.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:00:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,806
            CDSs (total)                      :: 5,751
            Genes (coding)                    :: 5,650
            CDSs (with protein)               :: 5,650
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 3, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 101
            CDSs (without protein)            :: 101
            Pseudo Genes (ambiguous residues) :: 0 of 101
            Pseudo Genes (frameshifted)       :: 22 of 101
            Pseudo Genes (incomplete)         :: 85 of 101
            Pseudo Genes (internal stop)      :: 8 of 101
            Pseudo Genes (multiple problems)  :: 13 of 101
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6345609
                     /organism="Pseudomonas extremorientalis"
                     /mol_type="genomic DNA"
                     /strain="LMG 19695"
                     /isolation_source="fresh water from drinking water
                     reservoir"
                     /type_material="type strain of Pseudomonas
                     extremorientalis"
                     /db_xref="taxon:169669"
                     /geo_loc_name="Russia"
                     /collection_date="1998"
WGS         MDGK01000001-MDGK01000063
WGS_SCAFLD  NZ_MDGK01000001-NZ_MDGK01000063
//
LOCUS       NZ_AMQP01000000      5910810 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas viridiflava UASWS0038, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AMQP00000000
VERSION     NZ_AMQP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02471545
            Assembly: GCF_000307715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas viridiflava UASWS0038
  ORGANISM  Pseudomonas viridiflava UASWS0038
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 5910810)
  AUTHORS   Lefort,F., Calmin,G., Crovadore,J., Osteras,M. and Farinelli,L.
  TITLE     Whole-Genome Shotgun Sequence of Pseudomonas viridiflava, a
            Bacterium Species Pathogenic to Ararabidopsis thaliana
  JOURNAL   Genome Announc 1 (1) (2013)
   PUBMED   23405356
REFERENCE   2  (bases 1 to 5910810)
  AUTHORS   Lefort,F., Calmin,G., Crovadore,J., Osteras,M. and Farinelli,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-SEP-2012) Institute Earth Nature and Environment -
            Hepia, University of Applied Sciences of Western Switzerland, Route
            de Presinge 150, Jussy, Geneva 1254, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AMQP00000000.1.
            The Pseudomonas viridiflava UASWS0038 whole genome shotgun (WGS)
            project has the project accession NZ_AMQP00000000.  This version of
            the project (01) has the accession number NZ_AMQP01000000, and
            consists of sequences AMQP01000001-AMQP01000201.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            Source DNA and bacteria are available from Prof. Francois Lefort,
            Plants and Pathogens Group, Institute Earth Nature and Environment,
            Geneva Institute of Technology, Architecture and Landscape,
            University of Applied Sciences of Western Switzerland, 150 Route de
            Presinge, 1254 Jussy, Switzerland.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABySS v. 1.3.4
            Assembly Name         :: PseVir1.0
            Genome Coverage       :: 12x
            Sequencing Technology :: Illumina GAII
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000307715.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:31:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,348
            CDSs (total)                      :: 5,278
            Genes (coding)                    :: 5,189
            CDSs (with protein)               :: 5,189
            Genes (RNA)                       :: 70
            rRNAs                             :: 5, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 89
            CDSs (without protein)            :: 89
            Pseudo Genes (ambiguous residues) :: 0 of 89
            Pseudo Genes (frameshifted)       :: 23 of 89
            Pseudo Genes (incomplete)         :: 68 of 89
            Pseudo Genes (internal stop)      :: 5 of 89
            Pseudo Genes (multiple problems)  :: 6 of 89
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5910810
                     /organism="Pseudomonas viridiflava UASWS0038"
                     /mol_type="genomic DNA"
                     /strain="UASWS0038"
                     /isolation_source="infected Rhododendron sp. leaf"
                     /host="Rhododendron sp."
                     /db_xref="taxon:450396"
                     /geo_loc_name="Switzerland"
                     /collection_date="2007-01"
                     /note="in evaluation as biological control agent"
WGS         AMQP01000001-AMQP01000201
WGS_SCAFLD  NZ_AMQP01000001-NZ_AMQP01000201
//
LOCUS       NZ_MLHL01000000      2592157 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Rodentibacter trehalosifermentans strain H1987082031, whole genome
            shotgun sequencing project.
ACCESSION   NZ_MLHL00000000
VERSION     NZ_MLHL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05892265
            Assembly: GCF_002000545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rodentibacter trehalosifermentans
  ORGANISM  Rodentibacter trehalosifermentans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Rodentibacter.
REFERENCE   1  (bases 1 to 2592157)
  AUTHORS   Christensen,H.
  TITLE     Rodentibacter gen. nov. and new species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2592157)
  AUTHORS   Christensen,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2016) Veterinary Disease Biology, University of
            Copenhagen, Stigbojlen 4, Frederiksberg 1870, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLHL00000000.1.
            The Rodentibacter trehalosifermentans whole genome shotgun (WGS)
            project has the project accession NZ_MLHL00000000.  This version of
            the project (01) has the accession number NZ_MLHL01000000, and
            consists of sequences MLHL01000001-MLHL01000123.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomic Workbench v. 9
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002000545.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:40:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,687
            CDSs (total)                      :: 2,633
            Genes (coding)                    :: 2,564
            CDSs (with protein)               :: 2,564
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 19 of 69
            Pseudo Genes (incomplete)         :: 49 of 69
            Pseudo Genes (internal stop)      :: 14 of 69
            Pseudo Genes (multiple problems)  :: 12 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2592157
                     /organism="Rodentibacter trehalosifermentans"
                     /mol_type="genomic DNA"
                     /strain="H1987082031"
                     /isolation_source="Trachea"
                     /host="Rat"
                     /type_material="type strain of Rodentibacter
                     trehalosifermentans"
                     /db_xref="taxon:1908263"
                     /geo_loc_name="Germany"
                     /collection_date="1987"
                     /collected_by="Warner Nicklas"
WGS         MLHL01000001-MLHL01000123
WGS_SCAFLD  NZ_MLHL01000001-NZ_MLHL01000123
//
LOCUS       NZ_FNTJ01000000      7375852 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas saponiphila strain DSM 9751, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNTJ00000000
VERSION     NZ_FNTJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05216178
            Assembly: GCF_900105185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas saponiphila
  ORGANISM  Pseudomonas saponiphila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNTJ00000000.1.
            The Pseudomonas saponiphila whole genome shotgun (WGS) project has
            the project accession NZ_FNTJ00000000.  This version of the project
            (01) has the accession number NZ_FNTJ01000000, and consists of
            sequences FNTJ01000001-FNTJ01000004.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900105185.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:07:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,116
            CDSs (total)                      :: 7,018
            Genes (coding)                    :: 6,815
            CDSs (with protein)               :: 6,815
            Genes (RNA)                       :: 98
            rRNAs                             :: 7, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 203
            CDSs (without protein)            :: 203
            Pseudo Genes (ambiguous residues) :: 0 of 203
            Pseudo Genes (frameshifted)       :: 38 of 203
            Pseudo Genes (incomplete)         :: 176 of 203
            Pseudo Genes (internal stop)      :: 14 of 203
            Pseudo Genes (multiple problems)  :: 21 of 203
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7375852
                     /organism="Pseudomonas saponiphila"
                     /mol_type="genomic DNA"
                     /strain="DSM 9751"
                     /type_material="type strain of Pseudomonas saponiphila"
                     /db_xref="taxon:556534"
WGS         FNTJ01000001-FNTJ01000004
WGS_SCAFLD  NZ_FNTJ01000001-NZ_FNTJ01000004
//
LOCUS       NZ_MLAJ01000000      2033538 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Rodentibacter ratti strain F75, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLAJ00000000
VERSION     NZ_MLAJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05860832
            Assembly: GCF_002000485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rodentibacter ratti
  ORGANISM  Rodentibacter ratti
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Rodentibacter.
REFERENCE   1  (bases 1 to 2033538)
  AUTHORS   Christensen,H.
  TITLE     Rodentibacter gen. nov. and new species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2033538)
  AUTHORS   Christensen,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2016) Veterinary Disease Biology, University of
            Copenhagen, Stigbojlen 4, Frederiksberg 1870, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLAJ00000000.1.
            The Rodentibacter ratti whole genome shotgun (WGS) project has the
            project accession NZ_MLAJ00000000.  This version of the project
            (01) has the accession number NZ_MLAJ01000000, and consists of
            sequences MLAJ01000001-MLAJ01000025.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomic Workbench v. 9
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002000485.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:41:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,972
            CDSs (total)                      :: 1,914
            Genes (coding)                    :: 1,898
            CDSs (with protein)               :: 1,898
            Genes (RNA)                       :: 58
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 10 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2033538
                     /organism="Rodentibacter ratti"
                     /mol_type="genomic DNA"
                     /strain="F75"
                     /host="Chicken"
                     /type_material="type strain of Rodentibacter ratti"
                     /db_xref="taxon:1906745"
                     /collection_date="1982"
WGS         MLAJ01000001-MLAJ01000025
WGS_SCAFLD  NZ_MLAJ01000001-NZ_MLAJ01000025
//
LOCUS       NZ_MLHJ01000000      2445671 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Rodentibacter rarus strain CCUG 17206, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MLHJ00000000
VERSION     NZ_MLHJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05892255
            Assembly: GCF_001998965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rodentibacter rarus
  ORGANISM  Rodentibacter rarus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Rodentibacter.
REFERENCE   1  (bases 1 to 2445671)
  AUTHORS   Christensen,H.
  TITLE     Rodentibacter gen. nov. and new species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2445671)
  AUTHORS   Christensen,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2016) Veterinary Disease Biology, University of
            Copenhagen, Stigbojlen 4, Frederiksberg 1870, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLHJ00000000.1.
            The Rodentibacter rarus whole genome shotgun (WGS) project has the
            project accession NZ_MLHJ00000000.  This version of the project
            (01) has the accession number NZ_MLHJ01000000, and consists of
            sequences MLHJ01000001-MLHJ01000163.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomic Workbench v. 9
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001998965.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:42:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,469
            CDSs (total)                      :: 2,411
            Genes (coding)                    :: 2,311
            CDSs (with protein)               :: 2,311
            Genes (RNA)                       :: 58
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 46 of 100
            Pseudo Genes (incomplete)         :: 71 of 100
            Pseudo Genes (internal stop)      :: 29 of 100
            Pseudo Genes (multiple problems)  :: 36 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2445671
                     /organism="Rodentibacter rarus"
                     /mol_type="genomic DNA"
                     /strain="CCUG 17206"
                     /host="Rat"
                     /type_material="type strain of Rodentibacter rarus"
                     /db_xref="taxon:1908260"
                     /geo_loc_name="USA"
WGS         MLHJ01000001-MLHJ01000163
WGS_SCAFLD  NZ_MLHJ01000001-NZ_MLHJ01000163
//
LOCUS       NZ_MLHG01000000      2484705 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Rodentibacter mrazii strain Ppn418, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLHG00000000
VERSION     NZ_MLHG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05892226
            Assembly: GCF_001998825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rodentibacter mrazii
  ORGANISM  Rodentibacter mrazii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Rodentibacter.
REFERENCE   1  (bases 1 to 2484705)
  AUTHORS   Christensen,H.
  TITLE     Rodentibacter gen. nov. and new species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2484705)
  AUTHORS   Christensen,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2016) Veterinary Disease Biology, University of
            Copenhagen, Stigbojlen 4, Frederiksberg 1870, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLHG00000000.1.
            The Rodentibacter mrazii whole genome shotgun (WGS) project has the
            project accession NZ_MLHG00000000.  This version of the project
            (01) has the accession number NZ_MLHG01000000, and consists of
            sequences MLHG01000001-MLHG01000136.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomic Workbench v. 9
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001998825.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:42:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,478
            CDSs (total)                      :: 2,420
            Genes (coding)                    :: 2,366
            CDSs (with protein)               :: 2,366
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 18 of 54
            Pseudo Genes (incomplete)         :: 36 of 54
            Pseudo Genes (internal stop)      :: 9 of 54
            Pseudo Genes (multiple problems)  :: 8 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2484705
                     /organism="Rodentibacter mrazii"
                     /mol_type="genomic DNA"
                     /strain="Ppn418"
                     /isolation_source="Nasopharynx"
                     /host="Apodemus sylvaticus"
                     /type_material="type strain of Rodentibacter mrazii"
                     /db_xref="taxon:1908257"
                     /geo_loc_name="Netherlands"
WGS         MLHG01000001-MLHG01000136
WGS_SCAFLD  NZ_MLHG01000001-NZ_MLHG01000136
//
LOCUS       NZ_MSTQ01000000      6249573 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas reinekei strain MT1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MSTQ00000000
VERSION     NZ_MSTQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06198581
            Assembly: GCF_001945365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas reinekei
  ORGANISM  Pseudomonas reinekei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6249573)
  AUTHORS   Poblete-Castro,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JAN-2017) Bioinformatics and Integrative Biology
            Center (Cbib), Universidad Andres Bello, Republica 239, Santiago,
            RM 8330091, Chile
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MSTQ00000000.1.
            The Pseudomonas reinekei whole genome shotgun (WGS) project has the
            project accession NZ_MSTQ00000000.  This version of the project
            (01) has the accession number NZ_MSTQ01000000, and consists of
            sequences MSTQ01000001-MSTQ01000063.
            Bacteria and source DNA available from Bitterfeld-Wolfen.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 06-JUN-2016
            Assembly Method        :: SPAdes v. 3.7.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 15,986x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001945365.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:10:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,802
            CDSs (total)                      :: 5,728
            Genes (coding)                    :: 5,594
            CDSs (with protein)               :: 5,594
            Genes (RNA)                       :: 74
            rRNAs                             :: 7, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 134
            CDSs (without protein)            :: 134
            Pseudo Genes (ambiguous residues) :: 0 of 134
            Pseudo Genes (frameshifted)       :: 28 of 134
            Pseudo Genes (incomplete)         :: 119 of 134
            Pseudo Genes (internal stop)      :: 9 of 134
            Pseudo Genes (multiple problems)  :: 21 of 134
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6249573
                     /organism="Pseudomonas reinekei"
                     /mol_type="genomic DNA"
                     /strain="MT1"
                     /isolation_source="soil"
                     /type_material="type strain of Pseudomonas reinekei"
                     /db_xref="taxon:395598"
                     /geo_loc_name="Germany: Bitterfeld, Bitterfeld-Wolfen"
                     /collection_date="1990"
WGS         MSTQ01000001-MSTQ01000063
WGS_SCAFLD  NZ_MSTQ01000001-NZ_MSTQ01000063
//
LOCUS       NZ_MLHQ01000000      2466277 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Rodentibacter myodis strain Ac151, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLHQ00000000
VERSION     NZ_MLHQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05898504
            Assembly: GCF_001999305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rodentibacter myodis
  ORGANISM  Rodentibacter myodis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Rodentibacter.
REFERENCE   1  (bases 1 to 2466277)
  AUTHORS   Christensen,H.
  TITLE     Rodentibacter gen. nov. and new species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2466277)
  AUTHORS   Christensen,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-OCT-2016) Veterinary Disease Biology, University of
            Copenhagen, Stigbojlen 4, Frederiksberg 1870, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLHQ00000000.1.
            The Rodentibacter myodis whole genome shotgun (WGS) project has the
            project accession NZ_MLHQ00000000.  This version of the project
            (01) has the accession number NZ_MLHQ01000000, and consists of
            sequences MLHQ01000001-MLHQ01000054.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomic Workbench v. 9
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001999305.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:43:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,433
            CDSs (total)                      :: 2,374
            Genes (coding)                    :: 2,324
            CDSs (with protein)               :: 2,324
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 16 of 50
            Pseudo Genes (incomplete)         :: 41 of 50
            Pseudo Genes (internal stop)      :: 7 of 50
            Pseudo Genes (multiple problems)  :: 10 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2466277
                     /organism="Rodentibacter myodis"
                     /mol_type="genomic DNA"
                     /strain="Ac151"
                     /isolation_source="Nasopharynx"
                     /host="Myodes glareolus"
                     /type_material="type strain of Rodentibacter myodis"
                     /db_xref="taxon:1907939"
                     /geo_loc_name="Netherlands"
WGS         MLHQ01000001-MLHQ01000054
WGS_SCAFLD  NZ_MLHQ01000001-NZ_MLHQ01000054
//
LOCUS       NZ_MSDO01000000      4174124 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Salinicola socius strain SMB35, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MSDO00000000
VERSION     NZ_MSDO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06145960
            Assembly: GCF_001937195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salinicola socius
  ORGANISM  Salinicola socius
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Salinicola.
REFERENCE   1  (bases 1 to 4174124)
  AUTHORS   Mavrodi,D.V., Olsson,B.E., Korsakova,E.S., Pyankova,A.,
            Mavrodi,O.V. and Plotnikova,E.G.
  TITLE     Draft genome sequences of strains Salinicola socius SMB35,
            Salinicola sp. MH3R3-1 and Chromohalobacter sp. SMB17 from the
            Verkhnekamsk potash mining region of Russia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4174124)
  AUTHORS   Mavrodi,D.V., Olsson,B.E., Korsakova,E.S., Pyankova,A.,
            Mavrodi,O.V. and Plotnikova,E.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-DEC-2016) Biological Sciences, University of Southern
            Mississippi, 118 College Drive #5018, Hattiesburg, MS 39406, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MSDO00000000.1.
            The Salinicola socius whole genome shotgun (WGS) project has the
            project accession NZ_MSDO00000000.  This version of the project
            (01) has the accession number NZ_MSDO01000000, and consists of
            sequences MSDO01000001-MSDO01000156.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 27-FEB-2016
            Assembly Method        :: ITMO Genome Assembler v. 0.1.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 302.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001937195.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:50:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,897
            CDSs (total)                      :: 3,807
            Genes (coding)                    :: 3,780
            CDSs (with protein)               :: 3,780
            Genes (RNA)                       :: 90
            rRNAs                             :: 4, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 0 of 27
            Pseudo Genes (incomplete)         :: 27 of 27
            Pseudo Genes (internal stop)      :: 1 of 27
            Pseudo Genes (multiple problems)  :: 1 of 27
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4174124
                     /organism="Salinicola socius"
                     /mol_type="genomic DNA"
                     /strain="SMB35"
                     /isolation_source="potash mine tailings"
                     /type_material="type strain of Salinicola socius"
                     /db_xref="taxon:404433"
                     /geo_loc_name="Russia: Solikamsk, Perm region"
                     /collection_date="2007"
WGS         MSDO01000001-MSDO01000156
WGS_SCAFLD  NZ_MSDO01000001-NZ_MSDO01000156
//
LOCUS       NZ_MUIO01000000      6103628 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas floridensis strain GEV388, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MUIO00000000
VERSION     NZ_MUIO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06275483
            Assembly: GCF_002087235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas floridensis
  ORGANISM  Pseudomonas floridensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6103628)
  AUTHORS   Timilsina,S., Vallad,G.E. and Jones,J.B.
  TITLE     Pseudomonas floridensis sp. nov., a novel pathogenic bacterial
            species isolated from tomato
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6103628)
  AUTHORS   Timilsina,S., Vallad,G.E. and Jones,J.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2017) Department of Plant Pathology, University
            of Florida, 1453 Hull Road, Fifield Hall, Gainesville, FL 32611,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MUIO00000000.1.
            The Pseudomonas floridensis whole genome shotgun (WGS) project has
            the project accession NZ_MUIO00000000.  This version of the project
            (01) has the accession number NZ_MUIO01000000, and consists of
            sequences MUIO01000001-MUIO01000287.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. June 2016
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 17.72x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002087235.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:27:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,782
            CDSs (total)                      :: 5,722
            Genes (coding)                    :: 5,526
            CDSs (with protein)               :: 5,526
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 196
            CDSs (without protein)            :: 196
            Pseudo Genes (ambiguous residues) :: 0 of 196
            Pseudo Genes (frameshifted)       :: 40 of 196
            Pseudo Genes (incomplete)         :: 165 of 196
            Pseudo Genes (internal stop)      :: 24 of 196
            Pseudo Genes (multiple problems)  :: 26 of 196
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6103628
                     /organism="Pseudomonas floridensis"
                     /mol_type="genomic DNA"
                     /strain="GEV388"
                     /isolation_source="tomato field"
                     /host="Solanum lycopersicum"
                     /type_material="type strain of Pseudomonas floridensis"
                     /db_xref="taxon:1958950"
                     /geo_loc_name="USA: Florida"
                     /lat_lon="27.75 N 82.23 W"
                     /collection_date="2011"
WGS         MUIO01000001-MUIO01000287
WGS_SCAFLD  NZ_MUIO01000001-NZ_MUIO01000287
//
LOCUS       NZ_FUGE01000000      2820886 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Psychrobacter piechaudii isolate Psychrobacter_piechaudii, whole
            genome shotgun sequencing project.
ACCESSION   NZ_FUGE00000000
VERSION     NZ_FUGE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA79694668
            Assembly: GCF_900162825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Psychrobacter piechaudii
  ORGANISM  Psychrobacter piechaudii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Psychrobacter.
REFERENCE   1
  AUTHORS   Mornico,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-FEB-2017) INSTITUT PASTEUR, Microbial Evolutionary
            Genomics, 25-28 RUE DU DOCTEUR ROUX 75015 PARIS, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FUGE00000000.1.
            The Psychrobacter piechaudii whole genome shotgun (WGS) project has
            the project accession NZ_FUGE00000000.  This version of the project
            (01) has the accession number NZ_FUGE01000000, and consists of
            sequences FUGE01000001-FUGE01000300.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900162825.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:51:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,629
            CDSs (total)                      :: 2,580
            Genes (coding)                    :: 2,394
            CDSs (with protein)               :: 2,394
            Genes (RNA)                       :: 49
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 30 of 186
            Pseudo Genes (incomplete)         :: 153 of 186
            Pseudo Genes (internal stop)      :: 17 of 186
            Pseudo Genes (multiple problems)  :: 12 of 186
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2820886
                     /organism="Psychrobacter piechaudii"
                     /mol_type="genomic DNA"
                     /isolate="Psychrobacter_piechaudii"
                     /db_xref="taxon:1945521"
WGS         FUGE01000001-FUGE01000300
WGS_SCAFLD  NZ_FUGE01000001-NZ_FUGE01000300
//
LOCUS       NZ_FUGD01000000      2941644 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Psychrobacter pasteurii isolate Psychrobacter_pasteurii, whole
            genome shotgun sequencing project.
ACCESSION   NZ_FUGD00000000
VERSION     NZ_FUGD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA79693918
            Assembly: GCF_900162815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Psychrobacter pasteurii
  ORGANISM  Psychrobacter pasteurii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Psychrobacter.
REFERENCE   1
  AUTHORS   Mornico,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-FEB-2017) INSTITUT PASTEUR, Microbial Evolutionary
            Genomics, 25-28 RUE DU DOCTEUR ROUX 75015 PARIS, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FUGD00000000.1.
            The Psychrobacter pasteurii whole genome shotgun (WGS) project has
            the project accession NZ_FUGD00000000.  This version of the project
            (01) has the accession number NZ_FUGD01000000, and consists of
            sequences FUGD01000001-FUGD01000229.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900162815.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:56:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,720
            CDSs (total)                      :: 2,666
            Genes (coding)                    :: 2,527
            CDSs (with protein)               :: 2,527
            Genes (RNA)                       :: 54
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 139
            CDSs (without protein)            :: 139
            Pseudo Genes (ambiguous residues) :: 0 of 139
            Pseudo Genes (frameshifted)       :: 25 of 139
            Pseudo Genes (incomplete)         :: 110 of 139
            Pseudo Genes (internal stop)      :: 20 of 139
            Pseudo Genes (multiple problems)  :: 16 of 139
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2941644
                     /organism="Psychrobacter pasteurii"
                     /mol_type="genomic DNA"
                     /isolate="Psychrobacter_pasteurii"
                     /db_xref="taxon:1945520"
WGS         FUGD01000001-FUGD01000229
WGS_SCAFLD  NZ_FUGD01000001-NZ_FUGD01000229
//
LOCUS       NZ_CCYI01000000      6050063 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas rhodesiae strain FF9, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CCYI00000000
VERSION     NZ_CCYI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2821761
            Assembly: GCF_000821225.2
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas rhodesiae
  ORGANISM  Pseudomonas rhodesiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1
  AUTHORS   Urmite Genomes Urmite,Genomes.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-OCT-2014) URMITE, 27 Bd J Moulin, 13385 Marseille
            Cedex 05, France, 13385, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CCYI00000000.1.
            The Pseudomonas rhodesiae whole genome shotgun (WGS) project has
            the project accession NZ_CCYI00000000.  This version of the project
            (01) has the accession number NZ_CCYI01000000, and consists of
            sequences CCYI01000001-CCYI01000014.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000821225.2-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:40:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,550
            CDSs (total)                      :: 5,479
            Genes (coding)                    :: 5,347
            CDSs (with protein)               :: 5,347
            Genes (RNA)                       :: 71
            rRNAs                             :: 7, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5 (5S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 132
            CDSs (without protein)            :: 132
            Pseudo Genes (ambiguous residues) :: 0 of 132
            Pseudo Genes (frameshifted)       :: 33 of 132
            Pseudo Genes (incomplete)         :: 104 of 132
            Pseudo Genes (internal stop)      :: 16 of 132
            Pseudo Genes (multiple problems)  :: 17 of 132
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6050063
                     /organism="Pseudomonas rhodesiae"
                     /mol_type="genomic DNA"
                     /strain="FF9"
                     /db_xref="taxon:76760"
WGS         CCYI01000001-CCYI01000014
WGS_SCAFLD  NZ_LN623544-NZ_LN623556
//
LOCUS       NZ_MOXD01000000      5012012 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Serratia oryzae strain J11-6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MOXD00000000
VERSION     NZ_MOXD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05970538
            Assembly: GCF_001976145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Serratia oryzae
  ORGANISM  Serratia oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (bases 1 to 5012012)
  AUTHORS   Zhang,X.-X. and Zhang,J.
  TITLE     Rahnella oryzae sp. nov., isolated from rice root
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5012012)
  AUTHORS   Zhang,X.-X. and Zhang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-NOV-2016) Agricultural Culture Collection of China,
            Chinese Academy of Sgricultural Sciences (CAAS), No. 12 of
            Zhongguancun South Street, Haidian District, Beijing, Beijing
            100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MOXD00000000.1.
            The Serratia oryzae whole genome shotgun (WGS) project has the
            project accession NZ_MOXD00000000.  This version of the project
            (01) has the accession number NZ_MOXD01000000, and consists of
            sequences MOXD01000001-MOXD01000081.
            Bacteria and source DNA available from Key Laboratory of Microbial
            Resources Collection and Preservation, Ministry of Agriculture,
            Institute of Agricultural Resources and Regional Planning, Chinese
            Academy of Agricultural Sciences, Beijing 100081, PR China.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 21-OCT-2016
            Assembly Method        :: MicrobeTrakr plus v. 0.9.1 (incorporates
                                      Velvet v. 1.2.09) v. October-2016
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 190.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001976145.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:58:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,600
            CDSs (total)                      :: 4,504
            Genes (coding)                    :: 4,395
            CDSs (with protein)               :: 4,395
            Genes (RNA)                       :: 96
            rRNAs                             :: 1, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3, 5 (16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 26 of 109
            Pseudo Genes (incomplete)         :: 96 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 24 of 109
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5012012
                     /organism="Serratia oryzae"
                     /mol_type="genomic DNA"
                     /strain="J11-6"
                     /host="rice"
                     /type_material="type strain of Serratia oryzae"
                     /db_xref="taxon:2034155"
                     /geo_loc_name="China: Hunan"
                     /collection_date="2015"
                     /collected_by="Agricultural Culture Collection of China"
                     /identified_by="Jun-Zhang"
WGS         MOXD01000001-MOXD01000081
WGS_SCAFLD  NZ_MOXD01000001-NZ_MOXD01000081
//
LOCUS       NZ_PHHE01000000      6902809 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas baetica strain LMG 25716, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PHHE00000000
VERSION     NZ_PHHE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04488362
            Assembly: GCF_002813455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas baetica
  ORGANISM  Pseudomonas baetica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6902809)
  AUTHORS   Loper,J.
  TITLE     Genome sequencing of a diverse group of Pseudomonas species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6902809)
  AUTHORS   Loper,J., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-NOV-2017) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PHHE00000000.1.
            The Pseudomonas baetica whole genome shotgun (WGS) project has the
            project accession NZ_PHHE00000000.  This version of the project
            (01) has the accession number NZ_PHHE01000000, and consists of
            sequence PHHE01000001.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. 2.3.0
            Expected Final Version :: No
            Genome Coverage        :: 33.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002813455.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:47:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,252
            CDSs (total)                      :: 6,156
            Genes (coding)                    :: 5,959
            CDSs (with protein)               :: 5,959
            Genes (RNA)                       :: 96
            rRNAs                             :: 7, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 197
            CDSs (without protein)            :: 197
            Pseudo Genes (ambiguous residues) :: 0 of 197
            Pseudo Genes (frameshifted)       :: 52 of 197
            Pseudo Genes (incomplete)         :: 137 of 197
            Pseudo Genes (internal stop)      :: 29 of 197
            Pseudo Genes (multiple problems)  :: 20 of 197
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6902809
                     /organism="Pseudomonas baetica"
                     /mol_type="genomic DNA"
                     /strain="LMG 25716"
                     /type_material="type strain of Pseudomonas baetica"
                     /db_xref="taxon:674054"
WGS         PHHE01000001
WGS_SCAFLD  NZ_PHHE01000001
//
LOCUS       NZ_PKPA01000000      4990628 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Ralstonia mannitolilytica strain WCHRM065837 clone
            065837_new_blaOXA_first_second, whole genome shotgun sequencing
            project.
ACCESSION   NZ_PKPA00000000
VERSION     NZ_PKPA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08238600
            Assembly: GCF_002939145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ralstonia mannitolilytica
  ORGANISM  Ralstonia mannitolilytica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia.
REFERENCE   1  (bases 1 to 4990628)
  AUTHORS   Fang,Q., Feng,Y. and Wang,X.
  TITLE     The draft genome of Ralstonia spp. strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4990628)
  AUTHORS   Fang,Q., Feng,Y. and Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-DEC-2017) Center of Infectious Diseases, West China
            Hospital, Sichuan University, Guoxuexiang 37, Chengdu, Sichuan
            610041, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PKPA00000000.1.
            The Ralstonia mannitolilytica whole genome shotgun (WGS) project
            has the project accession NZ_PKPA00000000.  This version of the
            project (01) has the accession number NZ_PKPA01000000, and consists
            of sequences PKPA01000001-PKPA01000037.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002939145.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:44:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,768
            CDSs (total)                      :: 4,711
            Genes (coding)                    :: 4,668
            CDSs (with protein)               :: 4,668
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 12 of 43
            Pseudo Genes (incomplete)         :: 32 of 43
            Pseudo Genes (internal stop)      :: 4 of 43
            Pseudo Genes (multiple problems)  :: 4 of 43
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4990628
                     /organism="Ralstonia mannitolilytica"
                     /mol_type="genomic DNA"
                     /strain="WCHRM065837"
                     /host="Homo sapiens"
                     /db_xref="taxon:105219"
                     /clone="065837_new_blaOXA_first_second"
                     /geo_loc_name="China: Sichuan, Chengdu"
                     /collection_date="2017"
WGS         PKPA01000001-PKPA01000037
WGS_SCAFLD  NZ_PKPA01000001-NZ_PKPA01000037
//
LOCUS       NZ_FNOX01000000      6949283 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas salomonii strain ICMP 14252, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNOX00000000
VERSION     NZ_FNOX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05216247
            Assembly: GCF_900107155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas salomonii
  ORGANISM  Pseudomonas salomonii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNOX00000000.1.
            The Pseudomonas salomonii whole genome shotgun (WGS) project has
            the project accession NZ_FNOX00000000.  This version of the project
            (01) has the accession number NZ_FNOX01000000, and consists of
            sequences FNOX01000001-FNOX01000039.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900107155.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:47:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,382
            CDSs (total)                      :: 6,313
            Genes (coding)                    :: 6,193
            CDSs (with protein)               :: 6,193
            Genes (RNA)                       :: 69
            rRNAs                             :: 5, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 120
            CDSs (without protein)            :: 120
            Pseudo Genes (ambiguous residues) :: 0 of 120
            Pseudo Genes (frameshifted)       :: 28 of 120
            Pseudo Genes (incomplete)         :: 97 of 120
            Pseudo Genes (internal stop)      :: 14 of 120
            Pseudo Genes (multiple problems)  :: 17 of 120
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6949283
                     /organism="Pseudomonas salomonii"
                     /mol_type="genomic DNA"
                     /strain="ICMP 14252"
                     /type_material="type strain of Pseudomonas salomonii"
                     /db_xref="taxon:191391"
WGS         FNOX01000001-FNOX01000039
WGS_SCAFLD  NZ_FNOX01000001-NZ_FNOX01000039
//
LOCUS       NZ_PKPB01000000      6115292 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Ralstonia insidiosa strain WCHRI065437 clone
            065437_new_blaOXA_first_second, whole genome shotgun sequencing
            project.
ACCESSION   NZ_PKPB00000000
VERSION     NZ_PKPB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08238599
            Assembly: GCF_002939035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ralstonia insidiosa
  ORGANISM  Ralstonia insidiosa
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia.
REFERENCE   1  (bases 1 to 6115292)
  AUTHORS   Fang,Q., Feng,Y. and Wang,X.
  TITLE     The draft genome of Ralstonia spp. strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6115292)
  AUTHORS   Fang,Q., Feng,Y. and Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-DEC-2017) Center of Infectious Diseases, West China
            Hospital, Sichuan University, Guoxuexiang 37, Chengdu, Sichuan
            610041, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PKPB00000000.1.
            The Ralstonia insidiosa whole genome shotgun (WGS) project has the
            project accession NZ_PKPB00000000.  This version of the project
            (01) has the accession number NZ_PKPB01000000, and consists of
            sequences PKPB01000001-PKPB01000039.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002939035.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:46:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,786
            CDSs (total)                      :: 5,729
            Genes (coding)                    :: 5,676
            CDSs (with protein)               :: 5,676
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 14 of 53
            Pseudo Genes (incomplete)         :: 41 of 53
            Pseudo Genes (internal stop)      :: 2 of 53
            Pseudo Genes (multiple problems)  :: 4 of 53
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6115292
                     /organism="Ralstonia insidiosa"
                     /mol_type="genomic DNA"
                     /strain="WCHRI065437"
                     /host="Homo sapiens"
                     /db_xref="taxon:190721"
                     /clone="065437_new_blaOXA_first_second"
                     /geo_loc_name="China: Sichuan, Chengdu"
                     /collection_date="2017"
WGS         PKPB01000001-PKPB01000039
WGS_SCAFLD  NZ_PKPB01000001-NZ_PKPB01000039
//
LOCUS       NZ_PHHD01000000      6792797 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas tolaasii NCPPB 2192, whole genome shotgun sequencing
            project.
ACCESSION   NZ_PHHD00000000
VERSION     NZ_PHHD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04488246
            Assembly: GCF_002813445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas tolaasii NCPPB 2192
  ORGANISM  Pseudomonas tolaasii NCPPB 2192
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6792797)
  AUTHORS   Loper,J.
  TITLE     Genome sequencing of a diverse group of Pseudomonas species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6792797)
  AUTHORS   Loper,J., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-NOV-2017) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PHHD00000000.1.
            The Pseudomonas tolaasii NCPPB 2192 whole genome shotgun (WGS)
            project has the project accession NZ_PHHD00000000.  This version of
            the project (01) has the accession number NZ_PHHD01000000, and
            consists of sequence PHHD01000001.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. 2.3.0
            Expected Final Version :: No
            Genome Coverage        :: 22.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002813445.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:47:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,166
            CDSs (total)                      :: 6,079
            Genes (coding)                    :: 5,992
            CDSs (with protein)               :: 5,992
            Genes (RNA)                       :: 87
            rRNAs                             :: 6, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 87
            CDSs (without protein)            :: 87
            Pseudo Genes (ambiguous residues) :: 0 of 87
            Pseudo Genes (frameshifted)       :: 35 of 87
            Pseudo Genes (incomplete)         :: 61 of 87
            Pseudo Genes (internal stop)      :: 22 of 87
            Pseudo Genes (multiple problems)  :: 23 of 87
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6792797
                     /organism="Pseudomonas tolaasii NCPPB 2192"
                     /mol_type="genomic DNA"
                     /strain="NCPPB 2192"
                     /type_material="type strain of Pseudomonas tolaasii"
                     /db_xref="taxon:564423"
WGS         PHHD01000001
WGS_SCAFLD  NZ_PHHD01000001
//
LOCUS       NZ_PKPC01000000      5924662 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Ralstonia insidiosa strain WCHRI065162 clone
            065162_new_blaOXA_first_second, whole genome shotgun sequencing
            project.
ACCESSION   NZ_PKPC00000000
VERSION     NZ_PKPC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08238598
            Assembly: GCF_002939165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ralstonia insidiosa
  ORGANISM  Ralstonia insidiosa
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia.
REFERENCE   1  (bases 1 to 5924662)
  AUTHORS   Fang,Q., Feng,Y. and Wang,X.
  TITLE     The draft genome of Ralstonia spp. strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5924662)
  AUTHORS   Fang,Q., Feng,Y. and Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-DEC-2017) Center of Infectious Diseases, West China
            Hospital, Sichuan University, Guoxuexiang 37, Chengdu, Sichuan
            610041, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PKPC00000000.1.
            The Ralstonia insidiosa whole genome shotgun (WGS) project has the
            project accession NZ_PKPC00000000.  This version of the project
            (01) has the accession number NZ_PKPC01000000, and consists of
            sequences PKPC01000001-PKPC01000046.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002939165.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:03:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,620
            CDSs (total)                      :: 5,564
            Genes (coding)                    :: 5,514
            CDSs (with protein)               :: 5,514
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 16 of 50
            Pseudo Genes (incomplete)         :: 43 of 50
            Pseudo Genes (internal stop)      :: 1 of 50
            Pseudo Genes (multiple problems)  :: 10 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5924662
                     /organism="Ralstonia insidiosa"
                     /mol_type="genomic DNA"
                     /strain="WCHRI065162"
                     /host="Homo sapiens"
                     /db_xref="taxon:190721"
                     /clone="065162_new_blaOXA_first_second"
                     /geo_loc_name="China: Sichuan, Chengdu"
                     /collection_date="2017"
WGS         PKPC01000001-PKPC01000046
WGS_SCAFLD  NZ_PKPC01000001-NZ_PKPC01000046
//
LOCUS       NZ_QZWI01000000      5501702 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Rahnella bruchi strain DSM 27398, whole genome shotgun sequencing
            project.
ACCESSION   NZ_QZWI00000000
VERSION     NZ_QZWI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10095204
            Assembly: GCF_003614975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rahnella bruchi
  ORGANISM  Rahnella bruchi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Rahnella.
REFERENCE   1  (bases 1 to 5501702)
  AUTHORS   Le Fleche-Mateos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-SEP-2018) Infection and Epidemiology, Institut
            Pasteur, 28 rue du Dr Roux, Paris 75015, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QZWI00000000.1.
            The Rahnella bruchi whole genome shotgun (WGS) project has the
            project accession NZ_QZWI00000000.  This version of the project
            (01) has the accession number NZ_QZWI01000000, and consists of
            sequences QZWI01000001-QZWI01000063.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: GS De Novo Assembler v. 4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 80.0x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003614975.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,042
            CDSs (total)                      :: 4,969
            Genes (coding)                    :: 4,869
            CDSs (with protein)               :: 4,869
            Genes (RNA)                       :: 73
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 24 of 100
            Pseudo Genes (incomplete)         :: 88 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 24 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5501702
                     /organism="Rahnella bruchi"
                     /mol_type="genomic DNA"
                     /strain="DSM 27398"
                     /culture_collection="DSM:27398"
                     /type_material="type strain of Rahnella bruchi"
                     /db_xref="taxon:1510573"
WGS         QZWI01000001-QZWI01000063
WGS_SCAFLD  NZ_QZWI01000001-NZ_QZWI01000063
//
LOCUS       NZ_QKVM01000000      6048361 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas sichuanensis strain WCHPs060039, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QKVM00000000
VERSION     NZ_QKVM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09302769
            Assembly: GCF_003231305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas sichuanensis
  ORGANISM  Pseudomonas sichuanensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6048361)
  AUTHORS   Qin,J., Feng,Y. and Zong,Z.
  TITLE     The draft genomes of two Pseudomonas sp. strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6048361)
  AUTHORS   Qin,J., Feng,Y. and Zong,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUN-2018) Center of Infectious Diseases, West China
            Hospital, Sichuan University, Guoxuexiang 37, Chengdu, Sichuan
            610041, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QKVM00000000.1.
            The Pseudomonas sichuanensis whole genome shotgun (WGS) project has
            the project accession NZ_QKVM00000000.  This version of the project
            (01) has the accession number NZ_QKVM01000000, and consists of
            sequences QKVM01000001-QKVM01000180.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003231305.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:04:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,703
            CDSs (total)                      :: 5,628
            Genes (coding)                    :: 5,492
            CDSs (with protein)               :: 5,492
            Genes (RNA)                       :: 75
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 65
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 136
            CDSs (without protein)            :: 136
            Pseudo Genes (ambiguous residues) :: 0 of 136
            Pseudo Genes (frameshifted)       :: 10 of 136
            Pseudo Genes (incomplete)         :: 129 of 136
            Pseudo Genes (internal stop)      :: 7 of 136
            Pseudo Genes (multiple problems)  :: 9 of 136
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6048361
                     /organism="Pseudomonas sichuanensis"
                     /mol_type="genomic DNA"
                     /strain="WCHPs060039"
                     /isolation_source="Sewage"
                     /type_material="type strain of Pseudomonas sichuanensis"
                     /db_xref="taxon:2213015"
                     /geo_loc_name="China: Chengdu, Sichuan"
                     /collection_date="2018-03-14"
WGS         QKVM01000001-QKVM01000180
WGS_SCAFLD  NZ_QKVM01000001-NZ_QKVM01000180
//
LOCUS       NZ_UVXL01000000      5921025 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas viridiflava isolate p6.B9, whole genome shotgun
            sequencing project.
ACCESSION   NZ_UVXL00000000
VERSION     NZ_UVXL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA104472978
            Assembly: GCF_900599985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas viridiflava
  ORGANISM  Pseudomonas viridiflava
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1
  AUTHORS   Karasov L,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2018) MAX PLANCK INSTITUTE FOR DEVELOPMENTAL
            BIOLOGY, Paul Ehrlich Strasse 20, Tuebingen, 72076, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            UVXL00000000.1.
            The Pseudomonas viridiflava whole genome shotgun (WGS) project has
            the project accession NZ_UVXL00000000.  This version of the project
            (01) has the accession number NZ_UVXL01000000, and consists of
            sequences UVXL01000001-UVXL01000033.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900599985.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:15:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,319
            CDSs (total)                      :: 5,245
            Genes (coding)                    :: 5,164
            CDSs (with protein)               :: 5,164
            Genes (RNA)                       :: 74
            rRNAs                             :: 7, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 13 of 81
            Pseudo Genes (incomplete)         :: 71 of 81
            Pseudo Genes (internal stop)      :: 8 of 81
            Pseudo Genes (multiple problems)  :: 11 of 81
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5921025
                     /organism="Pseudomonas viridiflava"
                     /mol_type="genomic DNA"
                     /isolate="p6.B9"
                     /db_xref="taxon:33069"
WGS         UVXL01000001-UVXL01000033
WGS_SCAFLD  NZ_UVXL01000001-NZ_UVXL01000033
//
LOCUS       NZ_RAHH01000000      5457431 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Rahnella woolbedingensis strain DSM 27399, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RAHH00000000
VERSION     NZ_RAHH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10095344
            Assembly: GCF_003602095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rahnella woolbedingensis
  ORGANISM  Rahnella woolbedingensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Rahnella.
REFERENCE   1  (bases 1 to 5457431)
  AUTHORS   Le Fleche-Mateos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-SEP-2018) Infection and Epidemiology, Institut
            Pasteur, 28 rue du Dr Roux, Paris 75015, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RAHH00000000.1.
            The Rahnella woolbedingensis whole genome shotgun (WGS) project has
            the project accession NZ_RAHH00000000.  This version of the project
            (01) has the accession number NZ_RAHH01000000, and consists of
            sequences RAHH01000001-RAHH01000114.
            Bacteria and source DNA available from DSMZ collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: GS De Novo Assembler v. 4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 80.0x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003602095.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:23:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,079
            CDSs (total)                      :: 4,993
            Genes (coding)                    :: 4,905
            CDSs (with protein)               :: 4,905
            Genes (RNA)                       :: 86
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 89
            CDSs (without protein)            :: 88
            Pseudo Genes (ambiguous residues) :: 0 of 89
            Pseudo Genes (frameshifted)       :: 22 of 89
            Pseudo Genes (incomplete)         :: 65 of 89
            Pseudo Genes (internal stop)      :: 13 of 89
            Pseudo Genes (multiple problems)  :: 12 of 89
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5457431
                     /organism="Rahnella woolbedingensis"
                     /mol_type="genomic DNA"
                     /strain="DSM 27399"
                     /culture_collection="DSM:27399"
                     /type_material="type strain of Rahnella woolbedingensis"
                     /db_xref="taxon:1510574"
WGS         RAHH01000001-RAHH01000114
WGS_SCAFLD  NZ_RAHH01000001-NZ_RAHH01000114
//
LOCUS       NZ_UTKF01000000      5986357 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas viridiflava isolate p1.D2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_UTKF00000000
VERSION     NZ_UTKF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA104472037
            Assembly: GCF_900583045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas viridiflava
  ORGANISM  Pseudomonas viridiflava
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1
  AUTHORS   Karasov L,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2018) MAX PLANCK INSTITUTE FOR DEVELOPMENTAL
            BIOLOGY, Paul Ehrlich Strasse 20, Tuebingen, 72076, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            UTKF00000000.1.
            The Pseudomonas viridiflava whole genome shotgun (WGS) project has
            the project accession NZ_UTKF00000000.  This version of the project
            (01) has the accession number NZ_UTKF01000000, and consists of
            sequences UTKF01000001-UTKF01000050.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900583045.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:18:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,369
            CDSs (total)                      :: 5,295
            Genes (coding)                    :: 5,206
            CDSs (with protein)               :: 5,206
            Genes (RNA)                       :: 74
            rRNAs                             :: 7, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 5, 3 (5S, 16S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 89
            CDSs (without protein)            :: 89
            Pseudo Genes (ambiguous residues) :: 0 of 89
            Pseudo Genes (frameshifted)       :: 15 of 89
            Pseudo Genes (incomplete)         :: 72 of 89
            Pseudo Genes (internal stop)      :: 11 of 89
            Pseudo Genes (multiple problems)  :: 9 of 89
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5986357
                     /organism="Pseudomonas viridiflava"
                     /mol_type="genomic DNA"
                     /isolate="p1.D2"
                     /db_xref="taxon:33069"
WGS         UTKF01000001-UTKF01000050
WGS_SCAFLD  NZ_UTKF01000001-NZ_UTKF01000050
//
LOCUS       NZ_NSDJ01000000      5499108 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Rahnella variigena strain CIP 105588, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NSDJ00000000
VERSION     NZ_NSDJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07554573
            Assembly: GCF_003610915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rahnella variigena
  ORGANISM  Rahnella variigena
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Rahnella.
REFERENCE   1  (bases 1 to 5499108)
  AUTHORS   Doonan,J., Denman,S. and Mcdonald,J.E.
  TITLE     Comparative genomics of bacteria isolated from necrotic lesions of
            AOD affected trees
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5499108)
  AUTHORS   Doonan,J., Denman,S. and Mcdonald,J.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-AUG-2017) Biological Sciences, Bangor University,
            Deiniol Road, Bangor, Gwynedd LL572UW, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NSDJ00000000.1.
            The Rahnella variigena whole genome shotgun (WGS) project has the
            project accession NZ_NSDJ00000000.  This version of the project
            (01) has the accession number NZ_NSDJ01000000, and consists of
            sequences NSDJ01000001-NSDJ01000002.
            Bacteria and source DNA available from Sandra Denman, Forest
            Research.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            This genome has a base modification file available.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-JUN-2017
            Assembly Method        :: Celera Assembler v. June-2017
            Assembly Name          :: Rvar_CIP
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 161.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003610915.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:18:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,043
            CDSs (total)                      :: 4,933
            Genes (coding)                    :: 4,872
            CDSs (with protein)               :: 4,872
            Genes (RNA)                       :: 110
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 33 of 61
            Pseudo Genes (incomplete)         :: 34 of 61
            Pseudo Genes (internal stop)      :: 11 of 61
            Pseudo Genes (multiple problems)  :: 13 of 61
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5499108
                     /organism="Rahnella variigena"
                     /mol_type="genomic DNA"
                     /strain="CIP 105588"
                     /host="Quercus"
                     /culture_collection="CIP:105588"
                     /type_material="type strain of Rahnella variigena"
                     /db_xref="taxon:574964"
                     /geo_loc_name="USA"
WGS         NSDJ01000001-NSDJ01000002
WGS_SCAFLD  NZ_NSDJ01000001-NZ_NSDJ01000002
//
LOCUS       NZ_UTPJ01000000      5879692 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas viridiflava isolate p20.H8, whole genome shotgun
            sequencing project.
ACCESSION   NZ_UTPJ00000000
VERSION     NZ_UTPJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA104472165
            Assembly: GCF_900584325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas viridiflava
  ORGANISM  Pseudomonas viridiflava
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1
  AUTHORS   Karasov L,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2018) MAX PLANCK INSTITUTE FOR DEVELOPMENTAL
            BIOLOGY, Paul Ehrlich Strasse 20, Tuebingen, 72076, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            UTPJ00000000.1.
            The Pseudomonas viridiflava whole genome shotgun (WGS) project has
            the project accession NZ_UTPJ00000000.  This version of the project
            (01) has the accession number NZ_UTPJ01000000, and consists of
            sequences UTPJ01000001-UTPJ01000077.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900584325.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:15:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,286
            CDSs (total)                      :: 5,216
            Genes (coding)                    :: 5,130
            CDSs (with protein)               :: 5,130
            Genes (RNA)                       :: 70
            rRNAs                             :: 7, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 86
            CDSs (without protein)            :: 86
            Pseudo Genes (ambiguous residues) :: 0 of 86
            Pseudo Genes (frameshifted)       :: 19 of 86
            Pseudo Genes (incomplete)         :: 73 of 86
            Pseudo Genes (internal stop)      :: 4 of 86
            Pseudo Genes (multiple problems)  :: 10 of 86
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5879692
                     /organism="Pseudomonas viridiflava"
                     /mol_type="genomic DNA"
                     /isolate="p20.H8"
                     /db_xref="taxon:33069"
WGS         UTPJ01000001-UTPJ01000077
WGS_SCAFLD  NZ_UTPJ01000001-NZ_UTPJ01000077
//
LOCUS       NZ_UTBM01000000      5982325 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas viridiflava isolate p11.E7, whole genome shotgun
            sequencing project.
ACCESSION   NZ_UTBM00000000
VERSION     NZ_UTBM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA104471812
            Assembly: GCF_900580735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas viridiflava
  ORGANISM  Pseudomonas viridiflava
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1
  AUTHORS   Karasov L,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2018) MAX PLANCK INSTITUTE FOR DEVELOPMENTAL
            BIOLOGY, Paul Ehrlich Strasse 20, Tuebingen, 72076, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            UTBM00000000.1.
            The Pseudomonas viridiflava whole genome shotgun (WGS) project has
            the project accession NZ_UTBM00000000.  This version of the project
            (01) has the accession number NZ_UTBM01000000, and consists of
            sequences UTBM01000001-UTBM01000070.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900580735.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:24:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,365
            CDSs (total)                      :: 5,299
            Genes (coding)                    :: 5,212
            CDSs (with protein)               :: 5,212
            Genes (RNA)                       :: 66
            rRNAs                             :: 7, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5 (5S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 87
            CDSs (without protein)            :: 87
            Pseudo Genes (ambiguous residues) :: 0 of 87
            Pseudo Genes (frameshifted)       :: 18 of 87
            Pseudo Genes (incomplete)         :: 66 of 87
            Pseudo Genes (internal stop)      :: 11 of 87
            Pseudo Genes (multiple problems)  :: 8 of 87
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5982325
                     /organism="Pseudomonas viridiflava"
                     /mol_type="genomic DNA"
                     /isolate="p11.E7"
                     /db_xref="taxon:33069"
WGS         UTBM01000001-UTBM01000070
WGS_SCAFLD  NZ_UTBM01000001-NZ_UTBM01000070
//
LOCUS       NZ_NCQI01000000      5183522 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Serratia marcescens strain RPH1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_NCQI00000000
VERSION     NZ_NCQI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06681551
            Assembly: GCF_004196355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (bases 1 to 5183522)
  AUTHORS   da Mota,F.F., Castro,D.P., Vieira,C.S., Gumiel,M., de
            Albuquerque,J.P., Carels,N. and Azambuja,P.
  TITLE     In vitro Trypanocidal Activity, Genomic Analysis of Isolates, and
            in vivo Transcription of Type VI Secretion System of Serratia
            marcescens Belonging to the Microbiota of Rhodnius prolixus
            Digestive Tract
  JOURNAL   Front Microbiol 9, 3205 (2019)
   PUBMED   30733713
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5183522)
  AUTHORS   Penna,P.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-APR-2017) IOC, Fiocruz, Av. Brasil 4365, Rio de
            Janeiro, Rio de Janeiro 21040-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NCQI00000000.1.
            The Serratia marcescens whole genome shotgun (WGS) project has the
            project accession NZ_NCQI00000000.  This version of the project
            (01) has the accession number NZ_NCQI01000000, and consists of
            sequences NCQI01000001-NCQI01000030.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2016
            Assembly Method        :: SPAdes v. 3.1.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 200.0x
            Sequencing Technology  :: Illumina Hiseq2500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004196355.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:24:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,002
            CDSs (total)                      :: 4,892
            Genes (coding)                    :: 4,861
            CDSs (with protein)               :: 4,861
            Genes (RNA)                       :: 110
            rRNAs                             :: 9, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 7 (5S)
            tRNAs                             :: 84
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 6 of 32
            Pseudo Genes (incomplete)         :: 24 of 32
            Pseudo Genes (internal stop)      :: 6 of 32
            Pseudo Genes (multiple problems)  :: 5 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5183522
                     /organism="Serratia marcescens"
                     /mol_type="genomic DNA"
                     /strain="RPH1"
                     /isolation_source="midgut"
                     /host="Rhodnius prolixus"
                     /db_xref="taxon:615"
                     /geo_loc_name="Brazil"
                     /collection_date="2016"
WGS         NCQI01000001-NCQI01000030
WGS_SCAFLD  NZ_NCQI01000001-NZ_NCQI01000030
//
LOCUS       NZ_UUMS01000000      6033320 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas viridiflava isolate p3.F2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_UUMS00000000
VERSION     NZ_UUMS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA104472778
            Assembly: GCF_900590415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas viridiflava
  ORGANISM  Pseudomonas viridiflava
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1
  AUTHORS   Karasov L,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2018) MAX PLANCK INSTITUTE FOR DEVELOPMENTAL
            BIOLOGY, Paul Ehrlich Strasse 20, Tuebingen, 72076, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            UUMS00000000.1.
            The Pseudomonas viridiflava whole genome shotgun (WGS) project has
            the project accession NZ_UUMS00000000.  This version of the project
            (01) has the accession number NZ_UUMS01000000, and consists of
            sequences UUMS01000001-UUMS01000069.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900590415.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:23:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,450
            CDSs (total)                      :: 5,375
            Genes (coding)                    :: 5,288
            CDSs (with protein)               :: 5,288
            Genes (RNA)                       :: 75
            rRNAs                             :: 7, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 59
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 87
            CDSs (without protein)            :: 87
            Pseudo Genes (ambiguous residues) :: 0 of 87
            Pseudo Genes (frameshifted)       :: 22 of 87
            Pseudo Genes (incomplete)         :: 74 of 87
            Pseudo Genes (internal stop)      :: 9 of 87
            Pseudo Genes (multiple problems)  :: 14 of 87
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6033320
                     /organism="Pseudomonas viridiflava"
                     /mol_type="genomic DNA"
                     /isolate="p3.F2"
                     /db_xref="taxon:33069"
WGS         UUMS01000001-UUMS01000069
WGS_SCAFLD  NZ_UUMS01000001-NZ_UUMS01000069
//
LOCUS       NZ_FNSV01000000     10311574 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Rhodococcus koreensis strain DSM 44498, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNSV00000000
VERSION     NZ_FNSV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04490239
            Assembly: GCF_900105905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rhodococcus koreensis
  ORGANISM  Rhodococcus koreensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNSV00000000.1.
            The Rhodococcus koreensis whole genome shotgun (WGS) project has
            the project accession NZ_FNSV00000000.  This version of the project
            (01) has the accession number NZ_FNSV01000000, and consists of
            sequences FNSV01000001-FNSV01000009.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900105905.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:28:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 9,545
            CDSs (total)                      :: 9,477
            Genes (coding)                    :: 9,165
            CDSs (with protein)               :: 9,165
            Genes (RNA)                       :: 68
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 312
            CDSs (without protein)            :: 312
            Pseudo Genes (ambiguous residues) :: 0 of 312
            Pseudo Genes (frameshifted)       :: 161 of 312
            Pseudo Genes (incomplete)         :: 219 of 312
            Pseudo Genes (internal stop)      :: 14 of 312
            Pseudo Genes (multiple problems)  :: 77 of 312
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10311574
                     /organism="Rhodococcus koreensis"
                     /mol_type="genomic DNA"
                     /strain="DSM 44498"
                     /type_material="type strain of Rhodococcus koreensis"
                     /db_xref="taxon:99653"
WGS         FNSV01000001-FNSV01000009
WGS_SCAFLD  NZ_FNSV01000001-NZ_FNSV01000009
//
LOCUS       NZ_VCEK01000000      4896638 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Saccharomonospora piscinae strain KCTC 19743, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VCEK00000000
VERSION     NZ_VCEK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11801333
            Assembly: GCF_005862235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Saccharomonospora piscinae
  ORGANISM  Saccharomonospora piscinae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.
REFERENCE   1  (bases 1 to 4896638)
  AUTHORS   Ramirez-Duran,N., De La Haba,R.R., Alonso-Carmona,S.,
            Sanchez-Porro,C., Sandoval-Trujillo,H. and Ventosa,A.
  TITLE     Draft genome of Saccharomonospora piscinae
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4896638)
  AUTHORS   Ramirez-Duran,N., De La Haba,R.R., Alonso-Carmona,S.,
            Sanchez-Porro,C., Sandoval-Trujillo,H. and Ventosa,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAY-2019) Microbiology and Parasitology, University
            of Sevilla, Spain, Prof Garcia Gonzalez, 2, Sevilla 41012, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VCEK00000000.1.
            The Saccharomonospora piscinae whole genome shotgun (WGS) project
            has the project accession NZ_VCEK00000000.  This version of the
            project (01) has the accession number NZ_VCEK01000000, and consists
            of sequences VCEK01000001-VCEK01000011.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 733.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005862235.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:40:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,553
            CDSs (total)                      :: 4,498
            Genes (coding)                    :: 4,471
            CDSs (with protein)               :: 4,471
            Genes (RNA)                       :: 55
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 9 of 27
            Pseudo Genes (incomplete)         :: 19 of 27
            Pseudo Genes (internal stop)      :: 4 of 27
            Pseudo Genes (multiple problems)  :: 3 of 27
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4896638
                     /organism="Saccharomonospora piscinae"
                     /mol_type="genomic DNA"
                     /strain="KCTC 19743"
                     /isolation_source="fishpond sediment"
                     /type_material="type strain of Saccharomonospora piscinae
                     Tseng et al. 2018"
                     /db_xref="taxon:687388"
                     /geo_loc_name="Taiwan"
                     /collection_date="2018"
WGS         VCEK01000001-VCEK01000011
WGS_SCAFLD  NZ_VCEK01000001-NZ_VCEK01000011
//
LOCUS       NZ_UUIT01000000      5884966 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas viridiflava isolate p2.D1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_UUIT00000000
VERSION     NZ_UUIT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA104472674
            Assembly: GCF_900589405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas viridiflava
  ORGANISM  Pseudomonas viridiflava
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1
  AUTHORS   Karasov L,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2018) MAX PLANCK INSTITUTE FOR DEVELOPMENTAL
            BIOLOGY, Paul Ehrlich Strasse 20, Tuebingen, 72076, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            UUIT00000000.1.
            The Pseudomonas viridiflava whole genome shotgun (WGS) project has
            the project accession NZ_UUIT00000000.  This version of the project
            (01) has the accession number NZ_UUIT01000000, and consists of
            sequences UUIT01000001-UUIT01000065.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900589405.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:30:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,321
            CDSs (total)                      :: 5,249
            Genes (coding)                    :: 5,163
            CDSs (with protein)               :: 5,163
            Genes (RNA)                       :: 72
            rRNAs                             :: 8, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 86
            CDSs (without protein)            :: 86
            Pseudo Genes (ambiguous residues) :: 0 of 86
            Pseudo Genes (frameshifted)       :: 23 of 86
            Pseudo Genes (incomplete)         :: 71 of 86
            Pseudo Genes (internal stop)      :: 8 of 86
            Pseudo Genes (multiple problems)  :: 13 of 86
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5884966
                     /organism="Pseudomonas viridiflava"
                     /mol_type="genomic DNA"
                     /isolate="p2.D1"
                     /db_xref="taxon:33069"
WGS         UUIT01000001-UUIT01000065
WGS_SCAFLD  NZ_UUIT01000001-NZ_UUIT01000065
//
LOCUS       NZ_RAHG01000000      4910561 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Rahnella inusitata strain DSM 30078, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RAHG00000000
VERSION     NZ_RAHG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10095182
            Assembly: GCF_003602055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rahnella inusitata
  ORGANISM  Rahnella inusitata
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Rahnella.
REFERENCE   1  (bases 1 to 4910561)
  AUTHORS   Le Fleche-Mateos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-SEP-2018) Infection and Epidemiology, Institut
            Pasteur, 28 rue du Dr Roux, Paris 75015, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RAHG00000000.1.
            The Rahnella inusitata whole genome shotgun (WGS) project has the
            project accession NZ_RAHG00000000.  This version of the project
            (01) has the accession number NZ_RAHG01000000, and consists of
            sequences RAHG01000001-RAHG01000030.
            Bacteria and source DNA available from DSMZ collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: GS De Novo Assembler v. 4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 80.0x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003602055.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:36:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,439
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,332
            CDSs (with protein)               :: 4,332
            Genes (RNA)                       :: 73
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 6 of 34
            Pseudo Genes (incomplete)         :: 26 of 34
            Pseudo Genes (internal stop)      :: 6 of 34
            Pseudo Genes (multiple problems)  :: 4 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4910561
                     /organism="Rahnella inusitata"
                     /mol_type="genomic DNA"
                     /strain="DSM 30078"
                     /culture_collection="DSM:30078"
                     /type_material="type strain of Rahnella inusitata"
                     /db_xref="taxon:58169"
WGS         RAHG01000001-RAHG01000030
WGS_SCAFLD  NZ_RAHG01000001-NZ_RAHG01000030
//
LOCUS       NZ_UTSB01000000      5990365 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas viridiflava isolate p21.G3, whole genome shotgun
            sequencing project.
ACCESSION   NZ_UTSB00000000
VERSION     NZ_UTSB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA104472237
            Assembly: GCF_900585035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas viridiflava
  ORGANISM  Pseudomonas viridiflava
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1
  AUTHORS   Karasov L,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2018) MAX PLANCK INSTITUTE FOR DEVELOPMENTAL
            BIOLOGY, Paul Ehrlich Strasse 20, Tuebingen, 72076, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            UTSB00000000.1.
            The Pseudomonas viridiflava whole genome shotgun (WGS) project has
            the project accession NZ_UTSB00000000.  This version of the project
            (01) has the accession number NZ_UTSB01000000, and consists of
            sequences UTSB01000001-UTSB01000062.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900585035.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:29:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,370
            CDSs (total)                      :: 5,295
            Genes (coding)                    :: 5,206
            CDSs (with protein)               :: 5,206
            Genes (RNA)                       :: 75
            rRNAs                             :: 7, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 5, 4 (5S, 16S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 89
            CDSs (without protein)            :: 89
            Pseudo Genes (ambiguous residues) :: 0 of 89
            Pseudo Genes (frameshifted)       :: 15 of 89
            Pseudo Genes (incomplete)         :: 70 of 89
            Pseudo Genes (internal stop)      :: 11 of 89
            Pseudo Genes (multiple problems)  :: 7 of 89
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5990365
                     /organism="Pseudomonas viridiflava"
                     /mol_type="genomic DNA"
                     /isolate="p21.G3"
                     /db_xref="taxon:33069"
WGS         UTSB01000001-UTSB01000062
WGS_SCAFLD  NZ_UTSB01000001-NZ_UTSB01000062
//
LOCUS       NZ_UTBA01000000      5922254 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas viridiflava isolate p11.C8, whole genome shotgun
            sequencing project.
ACCESSION   NZ_UTBA00000000
VERSION     NZ_UTBA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA104471796
            Assembly: GCF_900580625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas viridiflava
  ORGANISM  Pseudomonas viridiflava
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1
  AUTHORS   Karasov L,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2018) MAX PLANCK INSTITUTE FOR DEVELOPMENTAL
            BIOLOGY, Paul Ehrlich Strasse 20, Tuebingen, 72076, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            UTBA00000000.1.
            The Pseudomonas viridiflava whole genome shotgun (WGS) project has
            the project accession NZ_UTBA00000000.  This version of the project
            (01) has the accession number NZ_UTBA01000000, and consists of
            sequences UTBA01000001-UTBA01000040.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900580625.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:40:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,322
            CDSs (total)                      :: 5,248
            Genes (coding)                    :: 5,163
            CDSs (with protein)               :: 5,163
            Genes (RNA)                       :: 74
            rRNAs                             :: 7, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 85
            CDSs (without protein)            :: 85
            Pseudo Genes (ambiguous residues) :: 0 of 85
            Pseudo Genes (frameshifted)       :: 14 of 85
            Pseudo Genes (incomplete)         :: 74 of 85
            Pseudo Genes (internal stop)      :: 8 of 85
            Pseudo Genes (multiple problems)  :: 11 of 85
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5922254
                     /organism="Pseudomonas viridiflava"
                     /mol_type="genomic DNA"
                     /isolate="p11.C8"
                     /db_xref="taxon:33069"
WGS         UTBA01000001-UTBA01000040
WGS_SCAFLD  NZ_UTBA01000001-NZ_UTBA01000040
//
LOCUS       NZ_VORA01000000      4353438 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Roseibium aestuarii strain SYSU M00256-3, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VORA00000000
VERSION     NZ_VORA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12431302
            Assembly: GCF_008477545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Roseibium aestuarii
  ORGANISM  Roseibium aestuarii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Roseibium.
REFERENCE   1  (bases 1 to 4353438)
  AUTHORS   Duan,L., Li,X., Li,J.-L. and Li,W.-J.
  TITLE     Roseibium aestuarii sp. nov., a novel species isolated from Pearl
            River Estuary
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4353438)
  AUTHORS   Duan,L., Li,X., Li,J.-L. and Li,W.-J.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-AUG-2019) School of Life Sciences, Sun Yat-sen
            University, No. 135 Xingang West Road, Guangzhou, Guangdong 510275,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VORA00000000.1.
            The Roseibium aestuarii whole genome shotgun (WGS) project has the
            project accession NZ_VORA00000000.  This version of the project
            (01) has the accession number NZ_VORA01000000, and consists of
            sequences VORA01000001-VORA01000021.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_008477545.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:49:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,877
            CDSs (total)                      :: 3,818
            Genes (coding)                    :: 3,801
            CDSs (with protein)               :: 3,801
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 17
            CDSs (without protein)            :: 17
            Pseudo Genes (ambiguous residues) :: 0 of 17
            Pseudo Genes (frameshifted)       :: 3 of 17
            Pseudo Genes (incomplete)         :: 16 of 17
            Pseudo Genes (internal stop)      :: 0 of 17
            Pseudo Genes (multiple problems)  :: 2 of 17
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4353438
                     /organism="Roseibium aestuarii"
                     /mol_type="genomic DNA"
                     /strain="SYSU M00256-3"
                     /type_material="type strain of Roseibium aestuarii"
                     /db_xref="taxon:2600299"
                     /geo_loc_name="China: Pearl River estuary"
                     /collection_date="2016-09-05"
WGS         VORA01000001-VORA01000021
WGS_SCAFLD  NZ_VORA01000001-NZ_VORA01000021
//
LOCUS       NZ_UTQP01000000      5986233 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas viridiflava isolate p21.D3, whole genome shotgun
            sequencing project.
ACCESSION   NZ_UTQP00000000
VERSION     NZ_UTQP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA104472204
            Assembly: GCF_900584655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas viridiflava
  ORGANISM  Pseudomonas viridiflava
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1
  AUTHORS   Karasov L,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2018) MAX PLANCK INSTITUTE FOR DEVELOPMENTAL
            BIOLOGY, Paul Ehrlich Strasse 20, Tuebingen, 72076, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            UTQP00000000.1.
            The Pseudomonas viridiflava whole genome shotgun (WGS) project has
            the project accession NZ_UTQP00000000.  This version of the project
            (01) has the accession number NZ_UTQP01000000, and consists of
            sequences UTQP01000001-UTQP01000070.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900584655.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:38:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,371
            CDSs (total)                      :: 5,297
            Genes (coding)                    :: 5,208
            CDSs (with protein)               :: 5,208
            Genes (RNA)                       :: 74
            rRNAs                             :: 7, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 5, 3 (5S, 16S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 89
            CDSs (without protein)            :: 89
            Pseudo Genes (ambiguous residues) :: 0 of 89
            Pseudo Genes (frameshifted)       :: 13 of 89
            Pseudo Genes (incomplete)         :: 72 of 89
            Pseudo Genes (internal stop)      :: 11 of 89
            Pseudo Genes (multiple problems)  :: 7 of 89
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5986233
                     /organism="Pseudomonas viridiflava"
                     /mol_type="genomic DNA"
                     /isolate="p21.D3"
                     /db_xref="taxon:33069"
WGS         UTQP01000001-UTQP01000070
WGS_SCAFLD  NZ_UTQP01000001-NZ_UTQP01000070
//
LOCUS       NZ_VLLF01000000      4715652 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Roseibium hamelinense strain ATCC BAA-252, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VLLF00000000
VERSION     NZ_VLLF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02983001
            Assembly: GCF_007830545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Roseibium hamelinense
  ORGANISM  Roseibium hamelinense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Roseibium.
REFERENCE   1  (bases 1 to 4715652)
  AUTHORS   Goeker,M.
  TITLE     Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase
            II (KMG-II): from individual species to whole genera
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4715652)
  AUTHORS   Goeker,M., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-JUL-2019) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VLLF00000000.1.
            The Roseibium hamelinense whole genome shotgun (WGS) project has
            the project accession NZ_VLLF00000000.  This version of the project
            (01) has the accession number NZ_VLLF01000000, and consists of
            sequences VLLF01000001-VLLF01000025.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: AllPaths v. r46652
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 276.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007830545.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:51:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,326
            Genes (coding)                    :: 4,289
            CDSs (with protein)               :: 4,289
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 12 of 37
            Pseudo Genes (incomplete)         :: 27 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 6 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4715652
                     /organism="Roseibium hamelinense"
                     /mol_type="genomic DNA"
                     /strain="ATCC BAA-252"
                     /culture_collection="ATCC:BAA-252"
                     /type_material="type strain of Roseibium hamelinense"
                     /db_xref="taxon:150831"
WGS         VLLF01000001-VLLF01000025
WGS_SCAFLD  NZ_VLLF01000001-NZ_VLLF01000025
//
LOCUS       NZ_UNOZ01000000      6162601 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas reidholzensis strain CCOS 865, whole genome shotgun
            sequencing project.
ACCESSION   NZ_UNOZ00000000
VERSION     NZ_UNOZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA4836241
            Assembly: GCF_900536025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas reidholzensis
  ORGANISM  Pseudomonas reidholzensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1
  AUTHORS   Blom,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-AUG-2018) JLU, JLU, Justus-Liebig-University Giessen,
            Bioinformatics and Systems Biology, Heinrich-Buff-Ring 58, 35392
            Giessen, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            UNOZ00000000.1.
            The Pseudomonas reidholzensis whole genome shotgun (WGS) project
            has the project accession NZ_UNOZ00000000.  This version of the
            project (01) has the accession number NZ_UNOZ01000000, and consists
            of sequences UNOZ01000001-UNOZ01000045.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900536025.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:48:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,585
            CDSs (total)                      :: 5,498
            Genes (coding)                    :: 5,418
            CDSs (with protein)               :: 5,418
            Genes (RNA)                       :: 87
            rRNAs                             :: 8, 6, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8 (5S)
            partial rRNAs                     :: 6, 7 (16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 16 of 80
            Pseudo Genes (incomplete)         :: 68 of 80
            Pseudo Genes (internal stop)      :: 8 of 80
            Pseudo Genes (multiple problems)  :: 9 of 80
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6162601
                     /organism="Pseudomonas reidholzensis"
                     /mol_type="genomic DNA"
                     /strain="CCOS 865"
                     /type_material="type strain of Pseudomonas reidholzensis"
                     /db_xref="taxon:1785162"
WGS         UNOZ01000001-UNOZ01000045
WGS_SCAFLD  NZ_UNOZ01000001-NZ_UNOZ01000045
//
LOCUS       NZ_SMLZ01000000      4803506 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Roseibium denhamense strain JCM 10543, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SMLZ00000000
VERSION     NZ_SMLZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10974934
            Assembly: GCF_009711415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Roseibium denhamense
  ORGANISM  Roseibium denhamense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Roseibium.
REFERENCE   1  (bases 1 to 4803506)
  AUTHORS   Goldberg,S.R., Haltli,B.A., Correa,H. and Russell,K.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-FEB-2019) Biomedical Science, UPEI, 550 University
            Avenue, Charlottetown, Prince Edward Island C1A4P3, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SMLZ00000000.1.
            The Roseibium denhamense whole genome shotgun (WGS) project has the
            project accession NZ_SMLZ00000000.  This version of the project
            (01) has the accession number NZ_SMLZ01000000, and consists of
            sequences SMLZ01000001-SMLZ01000116.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 09-JUL-2018
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiniSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009711415.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:56:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,451
            CDSs (total)                      :: 4,401
            Genes (coding)                    :: 4,348
            CDSs (with protein)               :: 4,348
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 26 of 53
            Pseudo Genes (incomplete)         :: 27 of 53
            Pseudo Genes (internal stop)      :: 7 of 53
            Pseudo Genes (multiple problems)  :: 5 of 53
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4803506
                     /organism="Roseibium denhamense"
                     /mol_type="genomic DNA"
                     /strain="JCM 10543"
                     /isolation_source="Rhodophyta"
                     /type_material="type strain of Roseibium denhamense"
                     /db_xref="taxon:76305"
                     /geo_loc_name="Australia"
                     /collection_date="2013"
WGS         SMLZ01000001-SMLZ01000116
WGS_SCAFLD  NZ_SMLZ01000001-NZ_SMLZ01000116
//
LOCUS       NZ_SMLY01000000      4699362 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Roseibium hamelinense strain NBRC 16783, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SMLY00000000
VERSION     NZ_SMLY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10974935
            Assembly: GCF_009711505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Roseibium hamelinense
  ORGANISM  Roseibium hamelinense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Roseibium.
REFERENCE   1  (bases 1 to 4699362)
  AUTHORS   Goldberg,S.R., Haltli,B.A., Correa,H. and Russell,K.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-FEB-2019) Biomedical Science, UPEI, 550 University
            Avenue, Charlottetown, Prince Edward Island C1A4P3, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SMLY00000000.1.
            The Roseibium hamelinense whole genome shotgun (WGS) project has
            the project accession NZ_SMLY00000000.  This version of the project
            (01) has the accession number NZ_SMLY01000000, and consists of
            sequences SMLY01000001-SMLY01000087.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 09-JUL-2018
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiniSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009711505.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:05:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,389
            CDSs (total)                      :: 4,338
            Genes (coding)                    :: 4,287
            CDSs (with protein)               :: 4,287
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 16 of 51
            Pseudo Genes (incomplete)         :: 36 of 51
            Pseudo Genes (internal stop)      :: 5 of 51
            Pseudo Genes (multiple problems)  :: 6 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4699362
                     /organism="Roseibium hamelinense"
                     /mol_type="genomic DNA"
                     /strain="NBRC 16783"
                     /isolation_source="beach sands"
                     /type_material="type strain of Roseibium hamelinense"
                     /db_xref="taxon:150831"
                     /geo_loc_name="Australia"
                     /collection_date="2013"
WGS         SMLY01000001-SMLY01000087
WGS_SCAFLD  NZ_SMLY01000001-NZ_SMLY01000087
//
LOCUS       NZ_VUAZ01000000      5872402 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas kitaguniensis strain MAFF 212408, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VUAZ00000000
VERSION     NZ_VUAZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12688074
            Assembly: GCF_009296165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas kitaguniensis
  ORGANISM  Pseudomonas kitaguniensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 5872402)
  AUTHORS   Sawada,H., Fujikawa,T. and Satou,M.
  TITLE     Dismantling and reorganizing Pseudomonas marginalis sensu#lato
  JOURNAL   Plant Pathol 72 (4), 654-666 (2023)
  REMARK    DOI: 10.1111/ppa.13690
REFERENCE   2  (bases 1 to 5872402)
  AUTHORS   Sawada,H., Fujikawa,T., Nishiwaki,Y. and Horita,H.
  TITLE     Pseudomonas kitaguniensis sp. nov., a pathogen causing bacterial
            rot of Welsh onion in Japan
  JOURNAL   Int J Syst Evol Microbiol 70 (5), 3018-3026 (2020)
   PUBMED   32228807
REFERENCE   3  (bases 1 to 5872402)
  AUTHORS   Fujikawa,T. and Sawada,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2019) Institute of Fruit Tree and Tea Science,
            National Agriculture and Food Research Organization (NARO),
            Fujimoto 2-1, Tsukuba, Ibaraki 305-8605, Japan, Tsukuba, Ibaraki
            305-8605, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VUAZ00000000.1.
            The Pseudomonas kitaguniensis whole genome shotgun (WGS) project
            has the project accession NZ_VUAZ00000000.  This version of the
            project (01) has the accession number NZ_VUAZ01000000, and consists
            of sequences VUAZ01000001-VUAZ01000259.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from NARO Genebank.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: AUG-2019
            Assembly Method        :: CLC Genomics Workbench v. 12
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 111.8x
            Sequencing Technology  :: IonPGM
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009296165.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:03:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,444
            CDSs (total)                      :: 5,377
            Genes (coding)                    :: 4,875
            CDSs (with protein)               :: 4,875
            Genes (RNA)                       :: 67
            rRNAs                             :: 6, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 502
            CDSs (without protein)            :: 502
            Pseudo Genes (ambiguous residues) :: 0 of 502
            Pseudo Genes (frameshifted)       :: 397 of 502
            Pseudo Genes (incomplete)         :: 135 of 502
            Pseudo Genes (internal stop)      :: 7 of 502
            Pseudo Genes (multiple problems)  :: 33 of 502
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5872402
                     /organism="Pseudomonas kitaguniensis"
                     /mol_type="genomic DNA"
                     /strain="MAFF 212408"
                     /host="Allium fistulosum"
                     /type_material="type strain of Pseudomonas kitaguniensis"
                     /db_xref="taxon:2607908"
                     /geo_loc_name="Japan: Hokkaido"
                     /collection_date="2015"
WGS         VUAZ01000001-VUAZ01000259
WGS_SCAFLD  NZ_VUAZ01000001-NZ_VUAZ01000259
//
LOCUS       NZ_VFIO01000000      5310198 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas saxonica strain DSM 108989, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VFIO00000000
VERSION     NZ_VFIO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12046035
            Assembly: GCF_007858365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas saxonica
  ORGANISM  Pseudomonas saxonica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 5310198)
  AUTHORS   Hofmann,K., Huptas,C., Doll,E., Scherer,S. and Wenning,M.
  TITLE     Pseudomonas bimorpha sp. nov. isolated from bovine raw milk and
            skim milk concentrate
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5310198)
  AUTHORS   Huptas,C., Hofmann,K., Wenning,M. and Scherer,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-JUN-2019) Chair of Microbial Ecology, ZIEL Institute
            for Food an Health, Technische Universitaet Muenchen,
            Weihenstephaner Berg 3, Freising, Bayern 85354, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VFIO00000000.1.
            The Pseudomonas saxonica whole genome shotgun (WGS) project has the
            project accession NZ_VFIO00000000.  This version of the project
            (01) has the accession number NZ_VFIO01000000, and consists of
            sequences VFIO01000001-VFIO01000040.
            Bacteria and source DNA available from DSMZ.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: SPAdes v. 2.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 59.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007858365.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:56:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,877
            CDSs (total)                      :: 4,802
            Genes (coding)                    :: 4,708
            CDSs (with protein)               :: 4,708
            Genes (RNA)                       :: 75
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 94
            CDSs (without protein)            :: 94
            Pseudo Genes (ambiguous residues) :: 0 of 94
            Pseudo Genes (frameshifted)       :: 26 of 94
            Pseudo Genes (incomplete)         :: 76 of 94
            Pseudo Genes (internal stop)      :: 10 of 94
            Pseudo Genes (multiple problems)  :: 16 of 94
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5310198
                     /organism="Pseudomonas saxonica"
                     /mol_type="genomic DNA"
                     /strain="DSM 108989"
                     /isolation_source="skimmed milk concentrate"
                     /culture_collection="DSM:108989"
                     /type_material="type strain of Pseudomonas saxonica"
                     /db_xref="taxon:2600598"
                     /geo_loc_name="Germany: Northern Germany"
                     /collection_date="2012"
WGS         VFIO01000001-VFIO01000040
WGS_SCAFLD  NZ_VFIO01000001-NZ_VFIO01000040
//
LOCUS       NZ_JADDUN010000000   6585177 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas cyclaminis strain MAFF 301451, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JADDUN000000000
VERSION     NZ_JADDUN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16513464
            Assembly: GCF_015163725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas cyclaminis
  ORGANISM  Pseudomonas cyclaminis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6585177)
  AUTHORS   Sawada,H., Fujikawa,T. and Satou,M.
  TITLE     Dismantling and reorganizing Pseudomonas marginalis sensu#lato
  JOURNAL   Plant Pathol 72 (4), 654-666 (2023)
  REMARK    DOI: 10.1111/ppa.13690
REFERENCE   2  (bases 1 to 6585177)
  AUTHORS   Sawada,H., Fujikawa,T., Osada,S. and Satou,M.
  TITLE     Pseudomonas cyclaminis sp. nov., a pathogen causing bacterial bud
            blight of cyclamen in Japan
  JOURNAL   Int J Syst Evol Microbiol 71 (3) (2019)
   PUBMED   33650945
REFERENCE   3  (bases 1 to 6585177)
  AUTHORS   Fujikawa,T. and Sawada,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2020) Institute of Fruit Tree and Tea Science,
            National Agriculture and Food Research Organization (NARO),
            Fujimoto 2-1, Tsukuba, Ibaraki 305-8605, Japan, Tsukuba, Ibaraki
            305-8605, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADDUN000000000.1.
            The Pseudomonas cyclaminis whole genome shotgun (WGS) project has
            the project accession NZ_JADDUN000000000.  This version of the
            project (01) has the accession number NZ_JADDUN010000000, and
            consists of sequences JADDUN010000001-JADDUN010000402.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from NARO Genebank.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: SEP-2020
            Assembly Method        :: CLC Genomics Workbench v. 20
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 70.5x
            Sequencing Technology  :: IonPGM
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_015163725.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:32:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,249
            CDSs (total)                      :: 6,204
            Genes (coding)                    :: 5,514
            CDSs (with protein)               :: 5,514
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 690
            CDSs (without protein)            :: 690
            Pseudo Genes (ambiguous residues) :: 0 of 690
            Pseudo Genes (frameshifted)       :: 538 of 690
            Pseudo Genes (incomplete)         :: 175 of 690
            Pseudo Genes (internal stop)      :: 13 of 690
            Pseudo Genes (multiple problems)  :: 33 of 690
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6585177
                     /organism="Pseudomonas cyclaminis"
                     /mol_type="genomic DNA"
                     /strain="MAFF 301451"
                     /host="Cyclamen"
                     /db_xref="taxon:2781239"
                     /geo_loc_name="Japan: Miyagi"
                     /collection_date="1983"
WGS         JADDUN010000001-JADDUN010000402
WGS_SCAFLD  NZ_JADDUN010000001-NZ_JADDUN010000402
//
LOCUS       NZ_JAFHKI010000000   6257033 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas lactucae strain MAFF 301380, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAFHKI000000000
VERSION     NZ_JAFHKI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17975957
            Assembly: GCF_016937615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas lactucae
  ORGANISM  Pseudomonas lactucae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6257033)
  AUTHORS   Sawada,H., Fujikawa,T. and Satou,M.
  TITLE     Dismantling and reorganizing Pseudomonas marginalis sensu#lato
  JOURNAL   Plant Pathol 72 (4), 654-666 (2023)
  REMARK    DOI: 10.1111/ppa.13690
REFERENCE   2  (bases 1 to 6257033)
  AUTHORS   Sawada,H., Fujikawa,T. and Satou,M.
  TITLE     Pseudomonas lactucae sp. nov., a pathogen causing bacterial rot of
            lettuce in Japan
  JOURNAL   Int J Syst Evol Microbiol 71 (7) (2021)
   PUBMED   34309505
REFERENCE   3  (bases 1 to 6257033)
  AUTHORS   Fujikawa,T. and Sawada,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-FEB-2021) Institute of Fruit Tree and Tea Science,
            National Agriculture and Food Research Organization (NARO),
            Fujimoto 2-1, Tsukuba, Ibaraki 305-8605, Japan, Tsukuba, Ibaraki
            305-8605, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAFHKI000000000.1.
            The Pseudomonas lactucae whole genome shotgun (WGS) project has the
            project accession NZ_JAFHKI000000000.  This version of the project
            (01) has the accession number NZ_JAFHKI010000000, and consists of
            sequences JAFHKI010000001-JAFHKI010000268.
            
            Changed organism name from Pseudomonas sp. MAFF 301380 to
            Pseudomonas lactucae (JUL-2021).
            
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from NARO Genebank.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: FEB-2021
            Assembly Method        :: CLC Genomics Workbench v. 21
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 47.99x
            Sequencing Technology  :: IonPGM
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_016937615.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:39:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,917
            CDSs (total)                      :: 5,849
            Genes (coding)                    :: 5,159
            CDSs (with protein)               :: 5,159
            Genes (RNA)                       :: 68
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 690
            CDSs (without protein)            :: 690
            Pseudo Genes (ambiguous residues) :: 0 of 690
            Pseudo Genes (frameshifted)       :: 588 of 690
            Pseudo Genes (incomplete)         :: 125 of 690
            Pseudo Genes (internal stop)      :: 20 of 690
            Pseudo Genes (multiple problems)  :: 40 of 690
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6257033
                     /organism="Pseudomonas lactucae"
                     /mol_type="genomic DNA"
                     /strain="MAFF 301380"
                     /host="lettuce"
                     /type_material="type strain of Pseudomonas lactucae"
                     /db_xref="taxon:2813360"
                     /geo_loc_name="Japan: Tokushima"
                     /collection_date="1977"
WGS         JAFHKI010000001-JAFHKI010000268
WGS_SCAFLD  NZ_JAFHKI010000001-NZ_JAFHKI010000268
//
LOCUS       NZ_CBAIBC010000000   3906574 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Rhodovarius sp. isolate
            PELAGICS-MAG-x4-bin098482-VRNCE-SM-28sep21., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBAIBC000000000
VERSION     NZ_CBAIBC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117452190
            Assembly: GCF_964715525.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Rhodovarius sp. (freshwater metagenome)
  ORGANISM  Rhodovarius sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Rhodovarius.
REFERENCE   1  (bases 1 to 3906574)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-DEC-2024) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBAIBC000000000.1.
            The Rhodovarius sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBAIBC000000000.  This version of the project
            (01) has the accession number NZ_CBAIBC010000000, and consists of
            sequences CBAIBC010000001-CBAIBC010000119.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964715525.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:23:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,854
            CDSs (total)                      :: 3,807
            Genes (coding)                    :: 3,759
            CDSs (with protein)               :: 3,759
            Genes (RNA)                       :: 47
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 9 of 48
            Pseudo Genes (incomplete)         :: 40 of 48
            Pseudo Genes (internal stop)      :: 8 of 48
            Pseudo Genes (multiple problems)  :: 7 of 48
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3906574
                     /organism="Rhodovarius sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-x4-bin098482-VRNCE-SM-28sep21."
                     /isolation_source="Vransko-Cres lake"
                     /db_xref="taxon:2972673"
                     /environmental_sample
                     /geo_loc_name="Croatia"
                     /collection_date="2021-09-28"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBAIBC010000001-CBAIBC010000119
WGS_SCAFLD  NZ_CBAIBC010000001-NZ_CBAIBC010000119
//
LOCUS       NZ_JAFHKJ010000000   6272393 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas lactucae strain MAFF 301381, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAFHKJ000000000
VERSION     NZ_JAFHKJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17975962
            Assembly: GCF_016937555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas lactucae
  ORGANISM  Pseudomonas lactucae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6272393)
  AUTHORS   Sawada,H., Fujikawa,T. and Satou,M.
  TITLE     Dismantling and reorganizing Pseudomonas marginalis sensu#lato
  JOURNAL   Plant Pathol 72 (4), 654-666 (2023)
  REMARK    DOI: 10.1111/ppa.13690
REFERENCE   2  (bases 1 to 6272393)
  AUTHORS   Sawada,H., Fujikawa,T. and Satou,M.
  TITLE     Pseudomonas lactucae sp. nov., a pathogen causing bacterial rot of
            lettuce in Japan
  JOURNAL   Int J Syst Evol Microbiol 71 (7) (2021)
   PUBMED   34309505
REFERENCE   3  (bases 1 to 6272393)
  AUTHORS   Fujikawa,T. and Sawada,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-FEB-2021) Institute of Fruit Tree and Tea Science,
            National Agriculture and Food Research Organization (NARO),
            Fujimoto 2-1, Tsukuba, Ibaraki 305-8605, Japan, Tsukuba, Ibaraki
            305-8605, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAFHKJ000000000.1.
            The Pseudomonas lactucae whole genome shotgun (WGS) project has the
            project accession NZ_JAFHKJ000000000.  This version of the project
            (01) has the accession number NZ_JAFHKJ010000000, and consists of
            sequences JAFHKJ010000001-JAFHKJ010000223.
            
            Changed organism name from Pseudomonas sp. MAFF 301381 to
            Pseudomonas lactucae (JUL-2021).
            
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from NARO Genebank.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: FEB-2021
            Assembly Method        :: CLC Genomics Workbench v. 21
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 215.83x
            Sequencing Technology  :: IonPGM
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_016937555.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:50:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,922
            CDSs (total)                      :: 5,848
            Genes (coding)                    :: 5,331
            CDSs (with protein)               :: 5,331
            Genes (RNA)                       :: 74
            rRNAs                             :: 4, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 517
            CDSs (without protein)            :: 517
            Pseudo Genes (ambiguous residues) :: 0 of 517
            Pseudo Genes (frameshifted)       :: 393 of 517
            Pseudo Genes (incomplete)         :: 152 of 517
            Pseudo Genes (internal stop)      :: 18 of 517
            Pseudo Genes (multiple problems)  :: 43 of 517
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6272393
                     /organism="Pseudomonas lactucae"
                     /mol_type="genomic DNA"
                     /strain="MAFF 301381"
                     /host="lettuce"
                     /db_xref="taxon:2813360"
                     /geo_loc_name="Japan: Tokushima"
                     /collection_date="1977"
WGS         JAFHKJ010000001-JAFHKJ010000223
WGS_SCAFLD  NZ_JAFHKJ010000001-NZ_JAFHKJ010000223
//
LOCUS       NZ_CBBBNQ010000000   3821925 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Rhodovarius sp. isolate
            PELAGICS-MAG-m2-bin105983-FUNEE-SM-16jul20., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBBBNQ000000000
VERSION     NZ_CBBBNQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117451300
            Assembly: GCF_964846935.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Rhodovarius sp. (freshwater metagenome)
  ORGANISM  Rhodovarius sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Rhodovarius.
REFERENCE   1  (bases 1 to 3821925)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-JAN-2025) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBBBNQ000000000.1.
            The Rhodovarius sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBBBNQ000000000.  This version of the project
            (01) has the accession number NZ_CBBBNQ010000000, and consists of
            sequences CBBBNQ010000001-CBBBNQ010000340.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964846935.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:35:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,880
            CDSs (total)                      :: 3,836
            Genes (coding)                    :: 3,776
            CDSs (with protein)               :: 3,776
            Genes (RNA)                       :: 44
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 4 of 60
            Pseudo Genes (incomplete)         :: 55 of 60
            Pseudo Genes (internal stop)      :: 3 of 60
            Pseudo Genes (multiple problems)  :: 2 of 60
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3821925
                     /organism="Rhodovarius sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-m2-bin105983-FUNEE-SM-16jul20."
                     /isolation_source="Grosse Fuchskuhle NE lake"
                     /db_xref="taxon:2972673"
                     /environmental_sample
                     /geo_loc_name="Germany"
                     /collection_date="2020-07-16"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBBBNQ010000001-CBBBNQ010000340
WGS_SCAFLD  NZ_CBBBNQ010000001-NZ_CBBBNQ010000340
//
LOCUS       NZ_VUBA01000000      5891423 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas kitaguniensis strain MAFF 730085, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VUBA00000000
VERSION     NZ_VUBA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12688075
            Assembly: GCF_009296225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas kitaguniensis
  ORGANISM  Pseudomonas kitaguniensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 5891423)
  AUTHORS   Sawada,H., Fujikawa,T. and Satou,M.
  TITLE     Dismantling and reorganizing Pseudomonas marginalis sensu#lato
  JOURNAL   Plant Pathol 72 (4), 654-666 (2023)
  REMARK    DOI: 10.1111/ppa.13690
REFERENCE   2  (bases 1 to 5891423)
  AUTHORS   Sawada,H., Fujikawa,T., Nishiwaki,Y. and Horita,H.
  TITLE     Pseudomonas kitaguniensis sp. nov., a pathogen causing bacterial
            rot of Welsh onion in Japan
  JOURNAL   Int J Syst Evol Microbiol 70 (5), 3018-3026 (2020)
   PUBMED   32228807
REFERENCE   3  (bases 1 to 5891423)
  AUTHORS   Fujikawa,T. and Sawada,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2019) Institute of Fruit Tree and Tea Science,
            National Agriculture and Food Research Organization (NARO),
            Fujimoto 2-1, Tsukuba, Ibaraki 305-8605, Japan, Tsukuba, Ibaraki
            305-8605, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VUBA00000000.1.
            The Pseudomonas kitaguniensis whole genome shotgun (WGS) project
            has the project accession NZ_VUBA00000000.  This version of the
            project (01) has the accession number NZ_VUBA01000000, and consists
            of sequences VUBA01000001-VUBA01000302.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from NARO Genebank.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: AUG-2019
            Assembly Method        :: CLC Genomics Workbench v. 12
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 149.8x
            Sequencing Technology  :: IonPGM
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009296225.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:08:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,540
            CDSs (total)                      :: 5,487
            Genes (coding)                    :: 4,930
            CDSs (with protein)               :: 4,930
            Genes (RNA)                       :: 53
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 557
            CDSs (without protein)            :: 557
            Pseudo Genes (ambiguous residues) :: 0 of 557
            Pseudo Genes (frameshifted)       :: 444 of 557
            Pseudo Genes (incomplete)         :: 143 of 557
            Pseudo Genes (internal stop)      :: 9 of 557
            Pseudo Genes (multiple problems)  :: 37 of 557
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5891423
                     /organism="Pseudomonas kitaguniensis"
                     /mol_type="genomic DNA"
                     /strain="MAFF 730085"
                     /host="Allium fistulosum"
                     /db_xref="taxon:2607908"
                     /geo_loc_name="Japan: Akita"
                     /collection_date="1981"
WGS         VUBA01000001-VUBA01000302
WGS_SCAFLD  NZ_VUBA01000001-NZ_VUBA01000302
//
LOCUS       NZ_CBABVD010000000   3589057 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Rhodoferax sp. isolate
            PELAGICS-MAG-m2-bin116296-PLESH-SM-01jun20., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBABVD000000000
VERSION     NZ_CBABVD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117452311
            Assembly: GCF_964673285.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Rhodoferax sp. (freshwater metagenome)
  ORGANISM  Rhodoferax sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Rhodoferax.
REFERENCE   1  (bases 1 to 3589057)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-DEC-2024) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBABVD000000000.1.
            The Rhodoferax sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBABVD000000000.  This version of the project
            (01) has the accession number NZ_CBABVD010000000, and consists of
            sequences CBABVD010000001-CBABVD010000309.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964673285.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:42:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,610
            CDSs (total)                      :: 3,568
            Genes (coding)                    :: 3,474
            CDSs (with protein)               :: 3,474
            Genes (RNA)                       :: 42
            rRNAs                             :: 2 (5S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 36
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 94
            CDSs (without protein)            :: 94
            Pseudo Genes (ambiguous residues) :: 0 of 94
            Pseudo Genes (frameshifted)       :: 6 of 94
            Pseudo Genes (incomplete)         :: 90 of 94
            Pseudo Genes (internal stop)      :: 1 of 94
            Pseudo Genes (multiple problems)  :: 3 of 94
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3589057
                     /organism="Rhodoferax sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-m2-bin116296-PLESH-SM-01jun20."
                     /isolation_source="Plesne lake"
                     /db_xref="taxon:50421"
                     /environmental_sample
                     /geo_loc_name="Czechia"
                     /collection_date="2020-06-01"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBABVD010000001-CBABVD010000309
WGS_SCAFLD  NZ_CBABVD010000001-NZ_CBABVD010000309
//
LOCUS       NZ_JADDUM010000000   6614955 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas cyclaminis strain MAFF 301449, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JADDUM000000000
VERSION     NZ_JADDUM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16513463
            Assembly: GCF_015163715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas cyclaminis
  ORGANISM  Pseudomonas cyclaminis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6614955)
  AUTHORS   Sawada,H., Fujikawa,T. and Satou,M.
  TITLE     Dismantling and reorganizing Pseudomonas marginalis sensu#lato
  JOURNAL   Plant Pathol 72 (4), 654-666 (2023)
  REMARK    DOI: 10.1111/ppa.13690
REFERENCE   2  (bases 1 to 6614955)
  AUTHORS   Sawada,H., Fujikawa,T., Osada,S. and Satou,M.
  TITLE     Pseudomonas cyclaminis sp. nov., a pathogen causing bacterial bud
            blight of cyclamen in Japan
  JOURNAL   Int J Syst Evol Microbiol 71 (3) (2019)
   PUBMED   33650945
REFERENCE   3  (bases 1 to 6614955)
  AUTHORS   Fujikawa,T. and Sawada,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2020) Institute of Fruit Tree and Tea Science,
            National Agriculture and Food Research Organization (NARO),
            Fujimoto 2-1, Tsukuba, Ibaraki 305-8605, Japan, Tsukuba, Ibaraki
            305-8605, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADDUM000000000.1.
            The Pseudomonas cyclaminis whole genome shotgun (WGS) project has
            the project accession NZ_JADDUM000000000.  This version of the
            project (01) has the accession number NZ_JADDUM010000000, and
            consists of sequences JADDUM010000001-JADDUM010000407.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from NARO Genebank.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: SEP-2020
            Assembly Method        :: CLC Genomics Workbench v. 20
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 67.4x
            Sequencing Technology  :: IonPGM
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_015163715.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:43:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,256
            CDSs (total)                      :: 6,209
            Genes (coding)                    :: 5,527
            CDSs (with protein)               :: 5,527
            Genes (RNA)                       :: 47
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 38
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 682
            CDSs (without protein)            :: 682
            Pseudo Genes (ambiguous residues) :: 0 of 682
            Pseudo Genes (frameshifted)       :: 544 of 682
            Pseudo Genes (incomplete)         :: 158 of 682
            Pseudo Genes (internal stop)      :: 11 of 682
            Pseudo Genes (multiple problems)  :: 29 of 682
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6614955
                     /organism="Pseudomonas cyclaminis"
                     /mol_type="genomic DNA"
                     /strain="MAFF 301449"
                     /host="Cyclamen"
                     /type_material="type strain of Pseudomonas cyclaminis"
                     /db_xref="taxon:2781239"
                     /geo_loc_name="Japan: Miyagi"
                     /collection_date="1983"
WGS         JADDUM010000001-JADDUM010000407
WGS_SCAFLD  NZ_JADDUM010000001-NZ_JADDUM010000407
//
LOCUS       NZ_JARBHC010000000   5543857 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Rahnella contaminans strain JaDmexAd06, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JARBHC000000000
VERSION     NZ_JARBHC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN33329666
            Assembly: GCF_029222005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rahnella contaminans
  ORGANISM  Rahnella contaminans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Rahnella.
REFERENCE   1  (bases 1 to 5543857)
  AUTHORS   Rivera-Orduna,F.N., Pineda-Mendoza,R.M., Vega-Correa,B.,
            Lopez,M.F., Cano-Ramirez,C., Xia Zhang,X., Feng Chen,W. and
            Zuniga,G.
  TITLE     A polyphasic taxonomy analysis reveals the presence of an ecotype
            from Rahnella contaminans associated to the gut of
            Dendroctonus-bark beetles
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5543857)
  AUTHORS   Rivera-Orduna,F.N., Pineda-Mendoza,R.M., Vega-Correa,B.,
            Lopez,M.F., Cano-Ramirez,C., Xia Zhang,X., Feng Chen,W. and
            Zuniga,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-FEB-2023) Zoology, ENCB-IPN, Plan de Ayala, Mexico
            City, Mexico City 11320, Mexico
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARBHC000000000.1.
            The Rahnella contaminans whole genome shotgun (WGS) project has the
            project accession NZ_JARBHC000000000.  This version of the project
            (01) has the accession number NZ_JARBHC010000000, and consists of
            sequences JARBHC010000001-JARBHC010000067.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 12-SEP-2022
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.003x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029222005.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:11:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,127
            CDSs (total)                      :: 5,051
            Genes (coding)                    :: 4,983
            CDSs (with protein)               :: 4,983
            Genes (RNA)                       :: 76
            rRNAs                             :: 3, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 62
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 20 of 68
            Pseudo Genes (incomplete)         :: 54 of 68
            Pseudo Genes (internal stop)      :: 13 of 68
            Pseudo Genes (multiple problems)  :: 15 of 68
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5543857
                     /organism="Rahnella contaminans"
                     /mol_type="genomic DNA"
                     /strain="JaDmexAd06"
                     /isolation_source="gut"
                     /host="Dendroctonus mexicanus"
                     /db_xref="taxon:2703882"
                     /geo_loc_name="Mexico: Los Bancos, Pueblo Nuevo
                     municipality, Durango"
                     /lat_lon="23.65 N 105.73 W"
                     /collection_date="2012"
                     /identified_by="Flor N. Rivera"
WGS         JARBHC010000001-JARBHC010000067
WGS_SCAFLD  NZ_JARBHC010000001-NZ_JARBHC010000067
//
LOCUS       NZ_JBEVTR010000000   6019582 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Rhizobium nepotum strain 0d, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBEVTR000000000
VERSION     NZ_JBEVTR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40656065
            Assembly: GCF_049847705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rhizobium nepotum (Agrobacterium nepotum)
  ORGANISM  Rhizobium nepotum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Rhizobium.
REFERENCE   1  (bases 1 to 6019582)
  AUTHORS   Konup,L.A., Janse,L.A., Zelenianska,N., Riabyi,M.I., Konup,A.I.,
            Pikovskyi,M.Y., Kyryk,N., Schiffer,A.M., Rahman,A., Weisberg,A.J.,
            Vuek,A.O., Nikolaeva,N.I. and Artiukh,N.
  TITLE     Crown Gall of Grapevine Caused by Allorhizobium (Agrobacterium)
            vitis in Ukrain
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6019582)
  AUTHORS   Konup,L.A., Janse,L.A., Zelenianska,N., Riabyi,M.I., Konup,A.I.,
            Pikovskyi,M.Y., Kyryk,N., Schiffer,A.M., Rahman,A., Weisberg,A.J.,
            Vuek,A.O., Nikolaeva,N.I. and Artiukh,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-APR-2024) Botany and Plant Pathology, Oregon State
            University, 2701 SW Campus Way, Corvallis, OR 97331, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBEVTR000000000.1.
            The Rhizobium nepotum whole genome shotgun (WGS) project has the
            project accession NZ_JBEVTR000000000.  This version of the project
            (01) has the accession number NZ_JBEVTR010000000, and consists of
            sequences JBEVTR010000001-JBEVTR010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 21x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049847705.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:32:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,812
            CDSs (total)                      :: 5,741
            Genes (coding)                    :: 5,515
            CDSs (with protein)               :: 5,515
            Genes (RNA)                       :: 71
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 226
            CDSs (without protein)            :: 226
            Pseudo Genes (ambiguous residues) :: 0 of 226
            Pseudo Genes (frameshifted)       :: 155 of 226
            Pseudo Genes (incomplete)         :: 88 of 226
            Pseudo Genes (internal stop)      :: 26 of 226
            Pseudo Genes (multiple problems)  :: 39 of 226
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6019582
                     /organism="Rhizobium nepotum"
                     /mol_type="genomic DNA"
                     /strain="0d"
                     /host="Vitis vinifera"
                     /db_xref="taxon:1035271"
                     /geo_loc_name="Ukraine: Odesa region"
                     /collection_date="2012"
WGS         JBEVTR010000001-JBEVTR010000008
WGS_SCAFLD  NZ_JBEVTR010000001-NZ_JBEVTR010000008
//
LOCUS       NZ_JAJOZH010000000   6781952 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas petroselini strain MAFF 311095, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJOZH000000000
VERSION     NZ_JAJOZH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23560442
            Assembly: GCF_021166545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas petroselini
  ORGANISM  Pseudomonas petroselini
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6781952)
  AUTHORS   Sawada,H., Fujikawa,T. and Satou,M.
  TITLE     Dismantling and reorganizing Pseudomonas marginalis sensu#lato
  JOURNAL   Plant Pathol 72 (4), 654-666 (2023)
  REMARK    DOI: 10.1111/ppa.13690
REFERENCE   2  (bases 1 to 6781952)
  AUTHORS   Sawada,H., Fujikawa,T., Osada,S. and Satou,M.
  TITLE     Pseudomonas petroselini sp. nov., a pathogen causing bacterial rot
            of parsley in Japan
  JOURNAL   Int J Syst Evol Microbiol 72 (6) (2022)
   PUBMED   35695838
REFERENCE   3  (bases 1 to 6781952)
  AUTHORS   Fujikawa,T. and Sawada,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2021) Institute for Plant Protection, National
            Agriculture and Food Research Organization (NARO), Kannondai
            2-1-18, Tsukuba, Ibaraki 305-8666, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJOZH000000000.1.
            The Pseudomonas petroselini whole genome shotgun (WGS) project has
            the project accession NZ_JAJOZH000000000.  This version of the
            project (01) has the accession number NZ_JAJOZH010000000, and
            consists of sequences JAJOZH010000001-JAJOZH010000739.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from NARO Genebank.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 02-DEC-2021
            Assembly Method        :: CLC Genomics Workbench v. 21
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 13.5x
            Sequencing Technology  :: IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021166545.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:35:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,659
            CDSs (total)                      :: 6,612
            Genes (coding)                    :: 5,854
            CDSs (with protein)               :: 5,854
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 758
            CDSs (without protein)            :: 758
            Pseudo Genes (ambiguous residues) :: 0 of 758
            Pseudo Genes (frameshifted)       :: 545 of 758
            Pseudo Genes (incomplete)         :: 258 of 758
            Pseudo Genes (internal stop)      :: 15 of 758
            Pseudo Genes (multiple problems)  :: 57 of 758
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6781952
                     /organism="Pseudomonas petroselini"
                     /mol_type="genomic DNA"
                     /strain="MAFF 311095"
                     /host="Parsley"
                     /db_xref="taxon:2899822"
                     /geo_loc_name="Japan: Miyagi"
                     /collection_date="1993-12"
WGS         JAJOZH010000001-JAJOZH010000739
WGS_SCAFLD  NZ_JAJOZH010000001-NZ_JAJOZH010000739
//
LOCUS       NZ_JAJOZG010000000   6944956 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas petroselini strain MAFF 311094, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJOZG000000000
VERSION     NZ_JAJOZG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23560408
            Assembly: GCF_021166635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas petroselini
  ORGANISM  Pseudomonas petroselini
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6944956)
  AUTHORS   Sawada,H., Fujikawa,T. and Satou,M.
  TITLE     Dismantling and reorganizing Pseudomonas marginalis sensu#lato
  JOURNAL   Plant Pathol 72 (4), 654-666 (2023)
  REMARK    DOI: 10.1111/ppa.13690
REFERENCE   2  (bases 1 to 6944956)
  AUTHORS   Sawada,H., Fujikawa,T., Osada,S. and Satou,M.
  TITLE     Pseudomonas petroselini sp. nov., a pathogen causing bacterial rot
            of parsley in Japan
  JOURNAL   Int J Syst Evol Microbiol 72 (6) (2022)
   PUBMED   35695838
REFERENCE   3  (bases 1 to 6944956)
  AUTHORS   Fujikawa,T. and Sawada,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2021) Institute for Plant Protection, National
            Agriculture and Food Research Organization (NARO), Kannondai
            2-1-18, Tsukuba, Ibaraki 305-8666, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJOZG000000000.1.
            The Pseudomonas petroselini whole genome shotgun (WGS) project has
            the project accession NZ_JAJOZG000000000.  This version of the
            project (01) has the accession number NZ_JAJOZG010000000, and
            consists of sequences JAJOZG010000001-JAJOZG010000332.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from NARO Genebank.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 02-DEC-2021
            Assembly Method        :: CLC Genomics Workbench v. 21
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 39.5x
            Sequencing Technology  :: IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021166635.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:31:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,518
            CDSs (total)                      :: 6,454
            Genes (coding)                    :: 6,161
            CDSs (with protein)               :: 6,161
            Genes (RNA)                       :: 64
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 293
            CDSs (without protein)            :: 293
            Pseudo Genes (ambiguous residues) :: 0 of 293
            Pseudo Genes (frameshifted)       :: 156 of 293
            Pseudo Genes (incomplete)         :: 157 of 293
            Pseudo Genes (internal stop)      :: 13 of 293
            Pseudo Genes (multiple problems)  :: 30 of 293
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6944956
                     /organism="Pseudomonas petroselini"
                     /mol_type="genomic DNA"
                     /strain="MAFF 311094"
                     /host="Parsley"
                     /type_material="type strain of Pseudomonas petroselini"
                     /db_xref="taxon:2899822"
                     /geo_loc_name="Japan: Miyagi"
                     /collection_date="1993-12"
WGS         JAJOZG010000001-JAJOZG010000332
WGS_SCAFLD  NZ_JAJOZG010000001-NZ_JAJOZG010000332
//
LOCUS       NZ_JAJOZJ010000000   6916587 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas petroselini strain MAFF 311097, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJOZJ000000000
VERSION     NZ_JAJOZJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23560444
            Assembly: GCF_021166655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas petroselini
  ORGANISM  Pseudomonas petroselini
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6916587)
  AUTHORS   Sawada,H., Fujikawa,T. and Satou,M.
  TITLE     Dismantling and reorganizing Pseudomonas marginalis sensu#lato
  JOURNAL   Plant Pathol 72 (4), 654-666 (2023)
  REMARK    DOI: 10.1111/ppa.13690
REFERENCE   2  (bases 1 to 6916587)
  AUTHORS   Sawada,H., Fujikawa,T., Osada,S. and Satou,M.
  TITLE     Pseudomonas petroselini sp. nov., a pathogen causing bacterial rot
            of parsley in Japan
  JOURNAL   Int J Syst Evol Microbiol 72 (6) (2022)
   PUBMED   35695838
REFERENCE   3  (bases 1 to 6916587)
  AUTHORS   Fujikawa,T. and Sawada,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2021) Institute for Plant Protection, National
            Agriculture and Food Research Organization (NARO), Kannondai
            2-1-18, Tsukuba, Ibaraki 305-8666, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJOZJ000000000.1.
            The Pseudomonas petroselini whole genome shotgun (WGS) project has
            the project accession NZ_JAJOZJ000000000.  This version of the
            project (01) has the accession number NZ_JAJOZJ010000000, and
            consists of sequences JAJOZJ010000001-JAJOZJ010000399.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from NARO Genebank.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 02-DEC-2021
            Assembly Method        :: CLC Genomics Workbench v. 21
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 22.0x
            Sequencing Technology  :: IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021166655.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:27:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,500
            CDSs (total)                      :: 6,456
            Genes (coding)                    :: 6,043
            CDSs (with protein)               :: 6,043
            Genes (RNA)                       :: 44
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 35
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 413
            CDSs (without protein)            :: 413
            Pseudo Genes (ambiguous residues) :: 0 of 413
            Pseudo Genes (frameshifted)       :: 265 of 413
            Pseudo Genes (incomplete)         :: 168 of 413
            Pseudo Genes (internal stop)      :: 13 of 413
            Pseudo Genes (multiple problems)  :: 30 of 413
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6916587
                     /organism="Pseudomonas petroselini"
                     /mol_type="genomic DNA"
                     /strain="MAFF 311097"
                     /host="Parsley"
                     /db_xref="taxon:2899822"
                     /geo_loc_name="Japan: Miyagi"
                     /collection_date="1993-12"
WGS         JAJOZJ010000001-JAJOZJ010000399
WGS_SCAFLD  NZ_JAJOZJ010000001-NZ_JAJOZJ010000399
//
LOCUS       NZ_JAJOZI010000000   6919322 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas petroselini strain MAFF 311096, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJOZI000000000
VERSION     NZ_JAJOZI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23560443
            Assembly: GCF_021166595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas petroselini
  ORGANISM  Pseudomonas petroselini
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6919322)
  AUTHORS   Sawada,H., Fujikawa,T. and Satou,M.
  TITLE     Dismantling and reorganizing Pseudomonas marginalis sensu#lato
  JOURNAL   Plant Pathol 72 (4), 654-666 (2023)
  REMARK    DOI: 10.1111/ppa.13690
REFERENCE   2  (bases 1 to 6919322)
  AUTHORS   Sawada,H., Fujikawa,T., Osada,S. and Satou,M.
  TITLE     Pseudomonas petroselini sp. nov., a pathogen causing bacterial rot
            of parsley in Japan
  JOURNAL   Int J Syst Evol Microbiol 72 (6) (2022)
   PUBMED   35695838
REFERENCE   3  (bases 1 to 6919322)
  AUTHORS   Fujikawa,T. and Sawada,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2021) Institute for Plant Protection, National
            Agriculture and Food Research Organization (NARO), Kannondai
            2-1-18, Tsukuba, Ibaraki 305-8666, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJOZI000000000.1.
            The Pseudomonas petroselini whole genome shotgun (WGS) project has
            the project accession NZ_JAJOZI000000000.  This version of the
            project (01) has the accession number NZ_JAJOZI010000000, and
            consists of sequences JAJOZI010000001-JAJOZI010000292.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from NARO Genebank.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 02-DEC-2021
            Assembly Method        :: CLC Genomics Workbench v. 21
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 78.8x
            Sequencing Technology  :: IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021166595.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:33:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,457
            CDSs (total)                      :: 6,404
            Genes (coding)                    :: 6,164
            CDSs (with protein)               :: 6,164
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 240
            CDSs (without protein)            :: 240
            Pseudo Genes (ambiguous residues) :: 0 of 240
            Pseudo Genes (frameshifted)       :: 103 of 240
            Pseudo Genes (incomplete)         :: 155 of 240
            Pseudo Genes (internal stop)      :: 13 of 240
            Pseudo Genes (multiple problems)  :: 28 of 240
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6919322
                     /organism="Pseudomonas petroselini"
                     /mol_type="genomic DNA"
                     /strain="MAFF 311096"
                     /host="Parsley"
                     /db_xref="taxon:2899822"
                     /geo_loc_name="Japan: Miyagi"
                     /collection_date="1993-12"
WGS         JAJOZI010000001-JAJOZI010000292
WGS_SCAFLD  NZ_JAJOZI010000001-NZ_JAJOZI010000292
//
LOCUS       NZ_JALQCW010000000   7230175 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas morbosilactucae strain MAFF 302030, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JALQCW000000000
VERSION     NZ_JALQCW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27770878
            Assembly: GCF_023241715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas morbosilactucae
  ORGANISM  Pseudomonas morbosilactucae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7230175)
  AUTHORS   Sawada,H., Fujikawa,T. and Satou,M.
  TITLE     Dismantling and reorganizing Pseudomonas marginalis sensu#lato
  JOURNAL   Plant Pathol 72 (4), 654-666 (2023)
  REMARK    DOI: 10.1111/ppa.13690
REFERENCE   2  (bases 1 to 7230175)
  AUTHORS   Sawada,H., Fujikawa,T. and Satou,M.
  TITLE     Pseudomonas aegrilactucae sp. nov. and Pseudomonas morbosilactucae
            sp. nov., pathogens causing bacterial rot of lettuce in Japan
  JOURNAL   Int J Syst Evol Microbiol 72 (11) (2022)
   PUBMED   36331109
REFERENCE   3  (bases 1 to 7230175)
  AUTHORS   Fujikawa,T. and Sawada,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2022) Institute for Plant Protection, National
            Agriculture and Food Research Organization (NARO), Kannondai
            2-1-18, Tsukuba, Ibaraki 305-8666, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALQCW000000000.1.
            The Pseudomonas morbosilactucae whole genome shotgun (WGS) project
            has the project accession NZ_JALQCW000000000.  This version of the
            project (01) has the accession number NZ_JALQCW010000000, and
            consists of sequences JALQCW010000001-JALQCW010000160.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from NARO Genebank.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 23-DEC-2021
            Assembly Method        :: CLC Genomics Workbench v. 21
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 286.0x
            Sequencing Technology  :: IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_023241715.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:58:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,768
            CDSs (total)                      :: 6,710
            Genes (coding)                    :: 6,277
            CDSs (with protein)               :: 6,277
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 433
            CDSs (without protein)            :: 433
            Pseudo Genes (ambiguous residues) :: 0 of 433
            Pseudo Genes (frameshifted)       :: 323 of 433
            Pseudo Genes (incomplete)         :: 129 of 433
            Pseudo Genes (internal stop)      :: 14 of 433
            Pseudo Genes (multiple problems)  :: 30 of 433
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7230175
                     /organism="Pseudomonas morbosilactucae"
                     /mol_type="genomic DNA"
                     /strain="MAFF 302030"
                     /host="lettuce"
                     /type_material="type strain of Pseudomonas
                     morbosilactucae"
                     /db_xref="taxon:2938197"
                     /geo_loc_name="Japan: Fukuoka"
                     /collection_date="1977"
WGS         JALQCW010000001-JALQCW010000160
WGS_SCAFLD  NZ_JALQCW010000001-NZ_JALQCW010000160
//
LOCUS       NZ_JALQCX010000000   7005662 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas morbosilactucae strain MAFF 302046, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JALQCX000000000
VERSION     NZ_JALQCX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27770902
            Assembly: GCF_023241665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas morbosilactucae
  ORGANISM  Pseudomonas morbosilactucae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7005662)
  AUTHORS   Sawada,H., Fujikawa,T. and Satou,M.
  TITLE     Dismantling and reorganizing Pseudomonas marginalis sensu#lato
  JOURNAL   Plant Pathol 72 (4), 654-666 (2023)
  REMARK    DOI: 10.1111/ppa.13690
REFERENCE   2  (bases 1 to 7005662)
  AUTHORS   Sawada,H., Fujikawa,T. and Satou,M.
  TITLE     Pseudomonas aegrilactucae sp. nov. and Pseudomonas morbosilactucae
            sp. nov., pathogens causing bacterial rot of lettuce in Japan
  JOURNAL   Int J Syst Evol Microbiol 72 (11) (2022)
   PUBMED   36331109
REFERENCE   3  (bases 1 to 7005662)
  AUTHORS   Fujikawa,T. and Sawada,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2022) Institute for Plant Protection, National
            Agriculture and Food Research Organization (NARO), Kannondai
            2-1-18, Tsukuba, Ibaraki 305-8666, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALQCX000000000.1.
            The Pseudomonas morbosilactucae whole genome shotgun (WGS) project
            has the project accession NZ_JALQCX000000000.  This version of the
            project (01) has the accession number NZ_JALQCX010000000, and
            consists of sequences JALQCX010000001-JALQCX010000117.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from NARO Genebank.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 23-DEC-2021
            Assembly Method        :: CLC Genomics Workbench v. 21
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 319.2x
            Sequencing Technology  :: IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_023241665.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:56:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,430
            CDSs (total)                      :: 6,367
            Genes (coding)                    :: 6,036
            CDSs (with protein)               :: 6,036
            Genes (RNA)                       :: 63
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 51
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 235 of 331
            Pseudo Genes (incomplete)         :: 100 of 331
            Pseudo Genes (internal stop)      :: 9 of 331
            Pseudo Genes (multiple problems)  :: 11 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7005662
                     /organism="Pseudomonas morbosilactucae"
                     /mol_type="genomic DNA"
                     /strain="MAFF 302046"
                     /host="lettuce"
                     /db_xref="taxon:2938197"
                     /geo_loc_name="Japan: Wakayama"
                     /collection_date="1977"
WGS         JALQCX010000001-JALQCX010000117
WGS_SCAFLD  NZ_JALQCX010000001-NZ_JALQCX010000117
//
LOCUS       NZ_JAJISW010000000   5846021 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas syringae strain BRIP65014-c, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJISW000000000
VERSION     NZ_JAJISW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23013833
            Assembly: GCF_028526735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 5846021)
  AUTHORS   Djitro,N., Roach,R., Mann,R., Campbell,P.R., Rodoni,B. and
            Gambley,C.
  TITLE     Comparative genomics and genomic diversity of Pseudomonas syringae
            clade 2b-a in Australia
  JOURNAL   BMC Microbiol 22 (1), 278 (2022)
   PUBMED   36411421
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5846021)
  AUTHORS   Djitro,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2021) School of Applied Systems Biology, La Trobe
            University, Plenty Rd & Kingsbury Dr, Bundoora, VIC 3083, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJISW000000000.1.
            The Pseudomonas syringae whole genome shotgun (WGS) project has the
            project accession NZ_JAJISW000000000.  This version of the project
            (01) has the accession number NZ_JAJISW010000000, and consists of
            sequences JAJISW010000001-JAJISW010000088.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_028526735.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:02:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,135
            CDSs (total)                      :: 5,070
            Genes (coding)                    :: 4,948
            CDSs (with protein)               :: 4,948
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 122
            CDSs (without protein)            :: 122
            Pseudo Genes (ambiguous residues) :: 0 of 122
            Pseudo Genes (frameshifted)       :: 40 of 122
            Pseudo Genes (incomplete)         :: 101 of 122
            Pseudo Genes (internal stop)      :: 18 of 122
            Pseudo Genes (multiple problems)  :: 32 of 122
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5846021
                     /organism="Pseudomonas syringae"
                     /mol_type="genomic DNA"
                     /strain="BRIP65014-c"
                     /isolation_source="fruit"
                     /host="Cucurbita pepo (Zucchini) var. Eva"
                     /db_xref="taxon:317"
                     /geo_loc_name="Australia: Bundaberg"
                     /collection_date="2016-06-13"
WGS         JAJISW010000001-JAJISW010000088
WGS_SCAFLD  NZ_JAJISW010000001-NZ_JAJISW010000088
//
LOCUS       NZ_JBNCBK010000000   5570619 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas urmiensis strain A32, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBNCBK000000000
VERSION     NZ_JBNCBK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47842507
            Assembly: GCF_049811425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas urmiensis
  ORGANISM  Pseudomonas urmiensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 5570619)
  AUTHORS   Mesaros,A., Djordjevic,N. and Lozo,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-APR-2025) Chair of Biochemistry and Molecular
            Biology, University of Belgrade, Faculty of Biology, Studentski
            trg, Belgrade 11000, Serbia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCBK000000000.1.
            The Pseudomonas urmiensis whole genome shotgun (WGS) project has
            the project accession NZ_JBNCBK000000000.  This version of the
            project (01) has the accession number NZ_JBNCBK010000000, and
            consists of sequences JBNCBK010000001-JBNCBK010000034.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 218.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049811425.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:23:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,039
            CDSs (total)                      :: 4,968
            Genes (coding)                    :: 4,891
            CDSs (with protein)               :: 4,891
            Genes (RNA)                       :: 71
            rRNAs                             :: 2, 1 (5S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 19 of 77
            Pseudo Genes (incomplete)         :: 62 of 77
            Pseudo Genes (internal stop)      :: 6 of 77
            Pseudo Genes (multiple problems)  :: 10 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5570619
                     /organism="Pseudomonas urmiensis"
                     /mol_type="genomic DNA"
                     /strain="A32"
                     /host="Capsicum annuum"
                     /db_xref="taxon:2745493"
                     /geo_loc_name="Serbia"
                     /collection_date="2021"
WGS         JBNCBK010000001-JBNCBK010000034
WGS_SCAFLD  NZ_JBNCBK010000001-NZ_JBNCBK010000034
//
LOCUS       NZ_JBNCBL010000000   6056383 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas atacamensis strain A238, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNCBL000000000
VERSION     NZ_JBNCBL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47842574
            Assembly: GCF_049811445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas atacamensis
  ORGANISM  Pseudomonas atacamensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6056383)
  AUTHORS   Mesaros,A., Djordjevic,N. and Lozo,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-APR-2025) Chair of Biochemistry and Molecular
            Biology, University of Belgrade, Faculty of Biology, Studentski
            trg, Belgrade 11000, Serbia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCBL000000000.1.
            The Pseudomonas atacamensis whole genome shotgun (WGS) project has
            the project accession NZ_JBNCBL000000000.  This version of the
            project (01) has the accession number NZ_JBNCBL010000000, and
            consists of sequences JBNCBL010000001-JBNCBL010000033.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 275.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049811445.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:23:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,482
            CDSs (total)                      :: 5,419
            Genes (coding)                    :: 5,351
            CDSs (with protein)               :: 5,351
            Genes (RNA)                       :: 63
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 18 of 68
            Pseudo Genes (incomplete)         :: 61 of 68
            Pseudo Genes (internal stop)      :: 4 of 68
            Pseudo Genes (multiple problems)  :: 13 of 68
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6056383
                     /organism="Pseudomonas atacamensis"
                     /mol_type="genomic DNA"
                     /strain="A238"
                     /host="Capsicum annuum"
                     /db_xref="taxon:2565368"
                     /geo_loc_name="Serbia"
                     /collection_date="2021"
WGS         JBNCBL010000001-JBNCBL010000033
WGS_SCAFLD  NZ_JBNCBL010000001-NZ_JBNCBL010000033
//
LOCUS       NZ_JBSYSQ010000000   5250525 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter braakii strain 2SHAen10mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSQ000000000
VERSION     NZ_JBSYSQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364820
            Assembly: GCF_056860615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter braakii
  ORGANISM  Citrobacter braakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5250525)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5250525)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSQ000000000.1.
            The Citrobacter braakii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSQ000000000.  This version of the project
            (01) has the accession number NZ_JBSYSQ010000000, and consists of
            sequences JBSYSQ010000001-JBSYSQ010000154.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 24x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860615.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:45:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,182
            CDSs (total)                      :: 5,091
            Genes (coding)                    :: 4,938
            CDSs (with protein)               :: 4,938
            Genes (RNA)                       :: 91
            rRNAs                             :: 5, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 153
            CDSs (without protein)            :: 153
            Pseudo Genes (ambiguous residues) :: 0 of 153
            Pseudo Genes (frameshifted)       :: 31 of 153
            Pseudo Genes (incomplete)         :: 119 of 153
            Pseudo Genes (internal stop)      :: 31 of 153
            Pseudo Genes (multiple problems)  :: 24 of 153
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5250525
                     /organism="Citrobacter braakii"
                     /mol_type="genomic DNA"
                     /strain="2SHAen10mer"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:57706"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSQ010000001-JBSYSQ010000154
WGS_SCAFLD  NZ_JBSYSQ010000001-NZ_JBSYSQ010000154
//
LOCUS       NZ_JBSYSL010000000   5631308 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter portucalensis strain 2SHB2cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSL000000000
VERSION     NZ_JBSYSL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364825
            Assembly: GCF_056860535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter portucalensis
  ORGANISM  Citrobacter portucalensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5631308)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5631308)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSL000000000.1.
            The Citrobacter portucalensis whole genome shotgun (WGS) project
            has the project accession NZ_JBSYSL000000000.  This version of the
            project (01) has the accession number NZ_JBSYSL010000000, and
            consists of sequences JBSYSL010000001-JBSYSL010000224.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 28x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860535.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:47:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,606
            CDSs (total)                      :: 5,509
            Genes (coding)                    :: 5,341
            CDSs (with protein)               :: 5,341
            Genes (RNA)                       :: 97
            rRNAs                             :: 3, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 168
            CDSs (without protein)            :: 168
            Pseudo Genes (ambiguous residues) :: 0 of 168
            Pseudo Genes (frameshifted)       :: 39 of 168
            Pseudo Genes (incomplete)         :: 128 of 168
            Pseudo Genes (internal stop)      :: 23 of 168
            Pseudo Genes (multiple problems)  :: 20 of 168
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5631308
                     /organism="Citrobacter portucalensis"
                     /mol_type="genomic DNA"
                     /strain="2SHB2cef"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:1639133"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSL010000001-JBSYSL010000224
WGS_SCAFLD  NZ_JBSYSL010000001-NZ_JBSYSL010000224
//
LOCUS       NZ_JBSYSP010000000   5665797 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter braakii strain 2SHAen12mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSP000000000
VERSION     NZ_JBSYSP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364821
            Assembly: GCF_056860595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter braakii
  ORGANISM  Citrobacter braakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5665797)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5665797)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSP000000000.1.
            The Citrobacter braakii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSP000000000.  This version of the project
            (01) has the accession number NZ_JBSYSP010000000, and consists of
            sequences JBSYSP010000001-JBSYSP010000216.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 13x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860595.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:51:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,608
            CDSs (total)                      :: 5,521
            Genes (coding)                    :: 5,311
            CDSs (with protein)               :: 5,311
            Genes (RNA)                       :: 87
            rRNAs                             :: 5, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 5, 3 (5S, 16S)
            tRNAs                             :: 71
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 210
            CDSs (without protein)            :: 210
            Pseudo Genes (ambiguous residues) :: 0 of 210
            Pseudo Genes (frameshifted)       :: 43 of 210
            Pseudo Genes (incomplete)         :: 167 of 210
            Pseudo Genes (internal stop)      :: 29 of 210
            Pseudo Genes (multiple problems)  :: 27 of 210
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5665797
                     /organism="Citrobacter braakii"
                     /mol_type="genomic DNA"
                     /strain="2SHAen12mer"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:57706"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSP010000001-JBSYSP010000216
WGS_SCAFLD  NZ_JBSYSP010000001-NZ_JBSYSP010000216
//
LOCUS       NZ_JBSYSS010000000   5789120 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SHA6merB, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSS000000000
VERSION     NZ_JBSYSS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364818
            Assembly: GCF_056860655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5789120)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5789120)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSS000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSS000000000.  This version of the project
            (01) has the accession number NZ_JBSYSS010000000, and consists of
            sequences JBSYSS010000001-JBSYSS010000226.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 49x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860655.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:57:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,767
            CDSs (total)                      :: 5,672
            Genes (coding)                    :: 5,469
            CDSs (with protein)               :: 5,469
            Genes (RNA)                       :: 95
            rRNAs                             :: 3, 4, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 4, 7 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 203
            CDSs (without protein)            :: 203
            Pseudo Genes (ambiguous residues) :: 0 of 203
            Pseudo Genes (frameshifted)       :: 34 of 203
            Pseudo Genes (incomplete)         :: 169 of 203
            Pseudo Genes (internal stop)      :: 18 of 203
            Pseudo Genes (multiple problems)  :: 17 of 203
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5789120
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SHA6merB"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSS010000001-JBSYSS010000226
WGS_SCAFLD  NZ_JBSYSS010000001-NZ_JBSYSS010000226
//
LOCUS       NZ_JBWVBK010000000   4653366 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas caviae strain K1066, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWVBK000000000
VERSION     NZ_JBWVBK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56817063
            Assembly: GCF_056863395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas caviae
  ORGANISM  Aeromonas caviae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4653366)
  AUTHORS   Luo,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-APR-2026) Department of Clinical Laboratory, Taizhou
            Municipal Hospital, No. 381-1, Zhongshan East Road, Jiaojiang,
            Taizhou, Zhejiang 318000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWVBK000000000.1.
            The Aeromonas caviae whole genome shotgun (WGS) project has the
            project accession NZ_JBWVBK000000000.  This version of the project
            (01) has the accession number NZ_JBWVBK010000000, and consists of
            sequence JBWVBK010000001.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: the Oxford Nanopore Technologies
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863395.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:27:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,325
            CDSs (total)                      :: 4,166
            Genes (coding)                    :: 4,094
            CDSs (with protein)               :: 4,094
            Genes (RNA)                       :: 159
            rRNAs                             :: 11, 10, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 11, 10, 10 (5S, 16S, 23S)
            tRNAs                             :: 122
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 73
            CDSs (without protein)            :: 72
            Pseudo Genes (ambiguous residues) :: 0 of 73
            Pseudo Genes (frameshifted)       :: 27 of 73
            Pseudo Genes (incomplete)         :: 55 of 73
            Pseudo Genes (internal stop)      :: 15 of 73
            Pseudo Genes (multiple problems)  :: 21 of 73
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4653366
                     /organism="Aeromonas caviae"
                     /mol_type="genomic DNA"
                     /strain="K1066"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:648"
                     /geo_loc_name="China: Anhui"
                     /lat_lon="31 N 116 E"
                     /collection_date="2019"
                     /collected_by="Xinhua Luo"
WGS         JBWVBK010000001
WGS_SCAFLD  NZ_CM166504
//
LOCUS       NZ_JBSYRJ010000000   5074337 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SIB3mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRJ000000000
VERSION     NZ_JBSYRJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364853
            Assembly: GCF_056859975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5074337)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5074337)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRJ000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYRJ000000000.  This version of the project
            (01) has the accession number NZ_JBSYRJ010000000, and consists of
            sequences JBSYRJ010000001-JBSYRJ010000131.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 37x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859975.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:51:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,872
            Genes (coding)                    :: 4,732
            CDSs (with protein)               :: 4,732
            Genes (RNA)                       :: 96
            rRNAs                             :: 2, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 5 (16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 140
            CDSs (without protein)            :: 140
            Pseudo Genes (ambiguous residues) :: 0 of 140
            Pseudo Genes (frameshifted)       :: 33 of 140
            Pseudo Genes (incomplete)         :: 110 of 140
            Pseudo Genes (internal stop)      :: 15 of 140
            Pseudo Genes (multiple problems)  :: 17 of 140
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5074337
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SIB3mer"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRJ010000001-JBSYRJ010000131
WGS_SCAFLD  NZ_JBSYRJ010000001-NZ_JBSYRJ010000131
//
LOCUS       NZ_JBSYSN010000000   5428511 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter braakii strain 2SHAen3merBcef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSN000000000
VERSION     NZ_JBSYSN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364823
            Assembly: GCF_056860555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter braakii
  ORGANISM  Citrobacter braakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5428511)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5428511)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSN000000000.1.
            The Citrobacter braakii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSN000000000.  This version of the project
            (01) has the accession number NZ_JBSYSN010000000, and consists of
            sequences JBSYSN010000001-JBSYSN010000216.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 28x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860555.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:53:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,376
            CDSs (total)                      :: 5,292
            Genes (coding)                    :: 5,108
            CDSs (with protein)               :: 5,108
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 5 (16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 184
            CDSs (without protein)            :: 184
            Pseudo Genes (ambiguous residues) :: 0 of 184
            Pseudo Genes (frameshifted)       :: 34 of 184
            Pseudo Genes (incomplete)         :: 152 of 184
            Pseudo Genes (internal stop)      :: 25 of 184
            Pseudo Genes (multiple problems)  :: 22 of 184
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5428511
                     /organism="Citrobacter braakii"
                     /mol_type="genomic DNA"
                     /strain="2SHAen3merBcef"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:57706"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSN010000001-JBSYSN010000216
WGS_SCAFLD  NZ_JBSYSN010000001-NZ_JBSYSN010000216
//
LOCUS       NZ_JBSYST010000000   5430518 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter gillenii strain 2SHA4cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYST000000000
VERSION     NZ_JBSYST000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364817
            Assembly: GCF_056860735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter gillenii
  ORGANISM  Citrobacter gillenii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5430518)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5430518)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYST000000000.1.
            The Citrobacter gillenii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYST000000000.  This version of the project
            (01) has the accession number NZ_JBSYST010000000, and consists of
            sequences JBSYST010000001-JBSYST010000174.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 42x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860735.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:56:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,287
            CDSs (total)                      :: 5,195
            Genes (coding)                    :: 5,036
            CDSs (with protein)               :: 5,036
            Genes (RNA)                       :: 92
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 76
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 159
            CDSs (without protein)            :: 159
            Pseudo Genes (ambiguous residues) :: 0 of 159
            Pseudo Genes (frameshifted)       :: 34 of 159
            Pseudo Genes (incomplete)         :: 135 of 159
            Pseudo Genes (internal stop)      :: 13 of 159
            Pseudo Genes (multiple problems)  :: 19 of 159
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5430518
                     /organism="Citrobacter gillenii"
                     /mol_type="genomic DNA"
                     /strain="2SHA4cef"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:67828"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYST010000001-JBSYST010000174
WGS_SCAFLD  NZ_JBSYST010000001-NZ_JBSYST010000174
//
LOCUS       NZ_JBSYSF010000000   5269502 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter braakii strain 2SHcef4merA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSF000000000
VERSION     NZ_JBSYSF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364831
            Assembly: GCF_056860415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter braakii
  ORGANISM  Citrobacter braakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5269502)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5269502)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSF000000000.1.
            The Citrobacter braakii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSF000000000.  This version of the project
            (01) has the accession number NZ_JBSYSF010000000, and consists of
            sequences JBSYSF010000001-JBSYSF010000220.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 20x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860415.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:54:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,270
            CDSs (total)                      :: 5,182
            Genes (coding)                    :: 4,999
            CDSs (with protein)               :: 4,999
            Genes (RNA)                       :: 88
            rRNAs                             :: 2, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 183
            CDSs (without protein)            :: 183
            Pseudo Genes (ambiguous residues) :: 0 of 183
            Pseudo Genes (frameshifted)       :: 46 of 183
            Pseudo Genes (incomplete)         :: 138 of 183
            Pseudo Genes (internal stop)      :: 27 of 183
            Pseudo Genes (multiple problems)  :: 21 of 183
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5269502
                     /organism="Citrobacter braakii"
                     /mol_type="genomic DNA"
                     /strain="2SHcef4merA"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:57706"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSF010000001-JBSYSF010000220
WGS_SCAFLD  NZ_JBSYSF010000001-NZ_JBSYSF010000220
//
LOCUS       NZ_JBSYQR010000000   5031500 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter portucalensis strain 2SOB6mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYQR000000000
VERSION     NZ_JBSYQR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364871
            Assembly: GCF_056859635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter portucalensis
  ORGANISM  Citrobacter portucalensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5031500)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5031500)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYQR000000000.1.
            The Citrobacter portucalensis whole genome shotgun (WGS) project
            has the project accession NZ_JBSYQR000000000.  This version of the
            project (01) has the accession number NZ_JBSYQR010000000, and
            consists of sequences JBSYQR010000001-JBSYQR010000065.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 43x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859635.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:33:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,930
            CDSs (total)                      :: 4,842
            Genes (coding)                    :: 4,761
            CDSs (with protein)               :: 4,761
            Genes (RNA)                       :: 88
            rRNAs                             :: 3, 4, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 4, 3 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 27 of 81
            Pseudo Genes (incomplete)         :: 54 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 10 of 81
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5031500
                     /organism="Citrobacter portucalensis"
                     /mol_type="genomic DNA"
                     /strain="2SOB6mer"
                     /isolation_source="mWWTP outflow"
                     /db_xref="taxon:1639133"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYQR010000001-JBSYQR010000065
WGS_SCAFLD  NZ_JBSYQR010000001-NZ_JBSYQR010000065
//
LOCUS       NZ_JBWVBO010000000   4862688 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas caviae strain K1828, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWVBO000000000
VERSION     NZ_JBWVBO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56817317
            Assembly: GCF_056863565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas caviae
  ORGANISM  Aeromonas caviae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4862688)
  AUTHORS   Luo,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-APR-2026) Department of Clinical Laboratory, Taizhou
            Municipal Hospital, No. 381-1, Zhongshan East Road, Jiaojiang,
            Taizhou, Zhejiang 318000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWVBO000000000.1.
            The Aeromonas caviae whole genome shotgun (WGS) project has the
            project accession NZ_JBWVBO000000000.  This version of the project
            (01) has the accession number NZ_JBWVBO010000000, and consists of
            sequences JBWVBO010000001-JBWVBO010000002.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: the Oxford Nanopore Technologies
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863565.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:09:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,558
            CDSs (total)                      :: 4,396
            Genes (coding)                    :: 4,292
            CDSs (with protein)               :: 4,292
            Genes (RNA)                       :: 162
            rRNAs                             :: 11, 10, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 11, 10, 10 (5S, 16S, 23S)
            tRNAs                             :: 124
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 104
            CDSs (without protein)            :: 104
            Pseudo Genes (ambiguous residues) :: 0 of 104
            Pseudo Genes (frameshifted)       :: 34 of 104
            Pseudo Genes (incomplete)         :: 76 of 104
            Pseudo Genes (internal stop)      :: 15 of 104
            Pseudo Genes (multiple problems)  :: 16 of 104
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4862688
                     /organism="Aeromonas caviae"
                     /mol_type="genomic DNA"
                     /strain="K1828"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:648"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="28 N 122 E"
                     /collection_date="2023"
                     /collected_by="Xinhua Luo"
WGS         JBWVBO010000001-JBWVBO010000002
WGS_SCAFLD  NZ_CM166509
WGS_SCAFLD  NZ_JBWVBO010000002
//
LOCUS       NZ_JBTYJG010000000   1437681 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bartonella bacilliformis strain UPCH_B03, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBTYJG000000000
VERSION     NZ_JBTYJG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54879615
            Assembly: GCF_056866005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bartonella bacilliformis
  ORGANISM  Bartonella bacilliformis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Bartonellaceae; Bartonella.
REFERENCE   1  (bases 1 to 1437681)
  AUTHORS   Solis Cayo,L.A., Castillo Vilcahuaman,C., Cuicapuza,D. and
            Tsukayama,P.
  TITLE     Genomic and functional characterization of clinical isolates of
            Bartonella spp. causing Carrion's disease in Peru
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1437681)
  AUTHORS   Solis Cayo,L.A., Castillo Vilcahuaman,C., Cuicapuza,D. and
            Tsukayama,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JAN-2026) Facultad de Ciencias e Ingenieria,
            Universidad Peruana Cayetano Heredia, Av. Honorio Delgado 430 San
            Martin de Porres, Lima, Lima 150135, Peru
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTYJG000000000.1.
            The Bartonella bacilliformis whole genome shotgun (WGS) project has
            the project accession NZ_JBTYJG000000000.  This version of the
            project (01) has the accession number NZ_JBTYJG010000000, and
            consists of sequences JBTYJG010000001-JBTYJG010000016.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 17-JUL-2025
            Assembly Method        :: SPAdes v. 4.2.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 28.818x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056866005.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:41:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,292
            CDSs (total)                      :: 1,246
            Genes (coding)                    :: 1,199
            CDSs (with protein)               :: 1,199
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 47
            CDSs (without protein)            :: 47
            Pseudo Genes (ambiguous residues) :: 0 of 47
            Pseudo Genes (frameshifted)       :: 29 of 47
            Pseudo Genes (incomplete)         :: 25 of 47
            Pseudo Genes (internal stop)      :: 19 of 47
            Pseudo Genes (multiple problems)  :: 20 of 47
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1437681
                     /organism="Bartonella bacilliformis"
                     /mol_type="genomic DNA"
                     /strain="UPCH_B03"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:774"
                     /geo_loc_name="Peru: Ancash"
                     /lat_lon="9.5278 S 77.5278 W"
                     /collection_date="2003"
                     /collected_by="UPCH"
WGS         JBTYJG010000001-JBTYJG010000016
WGS_SCAFLD  NZ_JBTYJG010000001-NZ_JBTYJG010000016
//
LOCUS       NZ_JBSYSO010000000   5594423 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SHAen3merA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSO000000000
VERSION     NZ_JBSYSO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364822
            Assembly: GCF_056860635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5594423)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5594423)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSO000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSO000000000.  This version of the project
            (01) has the accession number NZ_JBSYSO010000000, and consists of
            sequences JBSYSO010000001-JBSYSO010000248.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 21x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860635.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:47:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,615
            CDSs (total)                      :: 5,527
            Genes (coding)                    :: 5,366
            CDSs (with protein)               :: 5,366
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 4 (16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 161
            CDSs (without protein)            :: 161
            Pseudo Genes (ambiguous residues) :: 0 of 161
            Pseudo Genes (frameshifted)       :: 28 of 161
            Pseudo Genes (incomplete)         :: 133 of 161
            Pseudo Genes (internal stop)      :: 16 of 161
            Pseudo Genes (multiple problems)  :: 15 of 161
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5594423
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SHAen3merA"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSO010000001-JBSYSO010000248
WGS_SCAFLD  NZ_JBSYSO010000001-NZ_JBSYSO010000248
//
LOCUS       NZ_JBSYSW010000000   5714639 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SHA1cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSW000000000
VERSION     NZ_JBSYSW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364814
            Assembly: GCF_056860775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5714639)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5714639)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSW000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSW000000000.  This version of the project
            (01) has the accession number NZ_JBSYSW010000000, and consists of
            sequences JBSYSW010000001-JBSYSW010000355.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860775.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:47:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,793
            CDSs (total)                      :: 5,699
            Genes (coding)                    :: 5,453
            CDSs (with protein)               :: 5,453
            Genes (RNA)                       :: 94
            rRNAs                             :: 2, 4, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 4, 8 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 246
            CDSs (without protein)            :: 246
            Pseudo Genes (ambiguous residues) :: 0 of 246
            Pseudo Genes (frameshifted)       :: 33 of 246
            Pseudo Genes (incomplete)         :: 212 of 246
            Pseudo Genes (internal stop)      :: 19 of 246
            Pseudo Genes (multiple problems)  :: 17 of 246
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5714639
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SHA1cef"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSW010000001-JBSYSW010000355
WGS_SCAFLD  NZ_JBSYSW010000001-NZ_JBSYSW010000355
//
LOCUS       NZ_JBXFXE010000000   7886423 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia sola strain MF6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXFXE000000000
VERSION     NZ_JBXFXE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN57276720
            Assembly: GCF_056856995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia sola
  ORGANISM  Burkholderia sola
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 7886423)
  AUTHORS   Finkel,O.M.
  TITLE     Evolutionarily conserved antagonistic mechanisms of soil microbiota
            towards Arabidopsis thaliana and Chlamydomonas reinhardtii
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7886423)
  AUTHORS   Finkel,O.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2026) Plant & Environmental Sciences, The Hebrew
            University Of Jerusalem, Derech Balfour, Jerusalem 9190401, Israel
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFXE000000000.1.
            The Burkholderia sola whole genome shotgun (WGS) project has the
            project accession NZ_JBXFXE000000000.  This version of the project
            (01) has the accession number NZ_JBXFXE010000000, and consists of
            sequences JBXFXE010000001-JBXFXE010000013.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Prof. Jeffery L. Dangl, Dr.
            Omri M. Finkel.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2025
            Assembly Method        :: Flye v. 2.9.6
            Assembly Name          :: MF6_Burkholderia_cenocepacia
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 102.0x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856995.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:48:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,163
            CDSs (total)                      :: 7,074
            Genes (coding)                    :: 6,756
            CDSs (with protein)               :: 6,756
            Genes (RNA)                       :: 89
            rRNAs                             :: 4, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 7, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 318
            CDSs (without protein)            :: 318
            Pseudo Genes (ambiguous residues) :: 0 of 318
            Pseudo Genes (frameshifted)       :: 204 of 318
            Pseudo Genes (incomplete)         :: 130 of 318
            Pseudo Genes (internal stop)      :: 14 of 318
            Pseudo Genes (multiple problems)  :: 23 of 318
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7886423
                     /organism="Burkholderia sola"
                     /mol_type="genomic DNA"
                     /strain="MF6"
                     /isolation_source="root"
                     /host="Arabidopsis thaliana"
                     /db_xref="taxon:2843302"
                     /geo_loc_name="USA: Mason Farm Chapel Hill, NC"
                     /collection_date="2013-11-19"
WGS         JBXFXE010000001-JBXFXE010000013
WGS_SCAFLD  NZ_JBXFXE010000001-NZ_JBXFXE010000013
//
LOCUS       NZ_JBSYSZ010000000   5158768 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter braakii strain 2SHA12mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSZ000000000
VERSION     NZ_JBSYSZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364811
            Assembly: GCF_056860795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter braakii
  ORGANISM  Citrobacter braakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5158768)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5158768)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSZ000000000.1.
            The Citrobacter braakii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSZ000000000.  This version of the project
            (01) has the accession number NZ_JBSYSZ010000000, and consists of
            sequences JBSYSZ010000001-JBSYSZ010000148.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860795.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:50:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,073
            CDSs (total)                      :: 4,985
            Genes (coding)                    :: 4,840
            CDSs (with protein)               :: 4,840
            Genes (RNA)                       :: 88
            rRNAs                             :: 3, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 31 of 145
            Pseudo Genes (incomplete)         :: 112 of 145
            Pseudo Genes (internal stop)      :: 29 of 145
            Pseudo Genes (multiple problems)  :: 24 of 145
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5158768
                     /organism="Citrobacter braakii"
                     /mol_type="genomic DNA"
                     /strain="2SHA12mer"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:57706"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSZ010000001-JBSYSZ010000148
WGS_SCAFLD  NZ_JBSYSZ010000001-NZ_JBSYSZ010000148
//
LOCUS       NZ_JBSYRX010000000   5174065 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter portucalensis strain 2SIA1cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRX000000000
VERSION     NZ_JBSYRX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364839
            Assembly: GCF_056860235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter portucalensis
  ORGANISM  Citrobacter portucalensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5174065)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5174065)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRX000000000.1.
            The Citrobacter portucalensis whole genome shotgun (WGS) project
            has the project accession NZ_JBSYRX000000000.  This version of the
            project (01) has the accession number NZ_JBSYRX010000000, and
            consists of sequences JBSYRX010000001-JBSYRX010000149.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 67x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860235.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:49:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,165
            CDSs (total)                      :: 5,065
            Genes (coding)                    :: 4,916
            CDSs (with protein)               :: 4,916
            Genes (RNA)                       :: 100
            rRNAs                             :: 5, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 5, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 149
            CDSs (without protein)            :: 149
            Pseudo Genes (ambiguous residues) :: 0 of 149
            Pseudo Genes (frameshifted)       :: 43 of 149
            Pseudo Genes (incomplete)         :: 110 of 149
            Pseudo Genes (internal stop)      :: 16 of 149
            Pseudo Genes (multiple problems)  :: 18 of 149
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5174065
                     /organism="Citrobacter portucalensis"
                     /mol_type="genomic DNA"
                     /strain="2SIA1cef"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:1639133"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRX010000001-JBSYRX010000149
WGS_SCAFLD  NZ_JBSYRX010000001-NZ_JBSYRX010000149
//
LOCUS       NZ_JBSYQX010000000   5245540 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SOA1cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYQX000000000
VERSION     NZ_JBSYQX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364865
            Assembly: GCF_056859775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5245540)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5245540)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYQX000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYQX000000000.  This version of the project
            (01) has the accession number NZ_JBSYQX010000000, and consists of
            sequences JBSYQX010000001-JBSYQX010000086.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 20x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859775.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:54:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,247
            CDSs (total)                      :: 5,161
            Genes (coding)                    :: 5,035
            CDSs (with protein)               :: 5,035
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 1 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 126
            CDSs (without protein)            :: 126
            Pseudo Genes (ambiguous residues) :: 0 of 126
            Pseudo Genes (frameshifted)       :: 36 of 126
            Pseudo Genes (incomplete)         :: 81 of 126
            Pseudo Genes (internal stop)      :: 22 of 126
            Pseudo Genes (multiple problems)  :: 12 of 126
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5245540
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SOA1cef"
                     /isolation_source="mWWTP outflow"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYQX010000001-JBSYQX010000086
WGS_SCAFLD  NZ_JBSYQX010000001-NZ_JBSYQX010000086
//
LOCUS       NZ_JBSXNI010000000   3433050 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Acinetobacter sp. L-24, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXNI000000000
VERSION     NZ_JBSXNI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312078
            Assembly: GCF_056857555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter sp. L-24
  ORGANISM  Acinetobacter sp. L-24
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter.
REFERENCE   1  (bases 1 to 3433050)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXNI000000000.1.
            The Acinetobacter sp. L-24 whole genome shotgun (WGS) project has
            the project accession NZ_JBSXNI000000000.  This version of the
            project (01) has the accession number NZ_JBSXNI010000000, and
            consists of sequences JBSXNI010000001-JBSXNI010000048.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 319.34x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857555.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:06:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,332
            CDSs (total)                      :: 3,247
            Genes (coding)                    :: 3,137
            CDSs (with protein)               :: 3,137
            Genes (RNA)                       :: 85
            rRNAs                             :: 7, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 1 (5S, 16S)
            tRNAs                             :: 71
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 110
            CDSs (without protein)            :: 110
            Pseudo Genes (ambiguous residues) :: 0 of 110
            Pseudo Genes (frameshifted)       :: 38 of 110
            Pseudo Genes (incomplete)         :: 80 of 110
            Pseudo Genes (internal stop)      :: 18 of 110
            Pseudo Genes (multiple problems)  :: 23 of 110
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3433050
                     /organism="Acinetobacter sp. L-24"
                     /mol_type="genomic DNA"
                     /strain="L-24"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472697"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.69187 N 63.83227 E"
                     /collection_date="2022-06"
WGS         JBSXNI010000001-JBSXNI010000048
WGS_SCAFLD  NZ_JBSXNI010000001-NZ_JBSXNI010000048
//
LOCUS       NZ_JBSYQS010000000   5224705 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SOB5mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYQS000000000
VERSION     NZ_JBSYQS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364870
            Assembly: GCF_056859615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5224705)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5224705)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYQS000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYQS000000000.  This version of the project
            (01) has the accession number NZ_JBSYQS010000000, and consists of
            sequences JBSYQS010000001-JBSYQS010000090.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 39x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859615.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:38:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,146
            CDSs (total)                      :: 5,051
            Genes (coding)                    :: 4,938
            CDSs (with protein)               :: 4,938
            Genes (RNA)                       :: 95
            rRNAs                             :: 2, 5, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 5, 6 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 113
            CDSs (without protein)            :: 113
            Pseudo Genes (ambiguous residues) :: 0 of 113
            Pseudo Genes (frameshifted)       :: 29 of 113
            Pseudo Genes (incomplete)         :: 77 of 113
            Pseudo Genes (internal stop)      :: 21 of 113
            Pseudo Genes (multiple problems)  :: 13 of 113
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5224705
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SOB5mer"
                     /isolation_source="mWWTP outflow"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYQS010000001-JBSYQS010000090
WGS_SCAFLD  NZ_JBSYQS010000001-NZ_JBSYQS010000090
//
LOCUS       NZ_JBWVBN010000000   4698475 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas caviae strain K1143, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWVBN000000000
VERSION     NZ_JBWVBN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56817236
            Assembly: GCF_056863515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas caviae
  ORGANISM  Aeromonas caviae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4698475)
  AUTHORS   Luo,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-APR-2026) Department of Clinical Laboratory, Taizhou
            Municipal Hospital, No. 381-1, Zhongshan East Road, Jiaojiang,
            Taizhou, Zhejiang 318000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWVBN000000000.1.
            The Aeromonas caviae whole genome shotgun (WGS) project has the
            project accession NZ_JBWVBN000000000.  This version of the project
            (01) has the accession number NZ_JBWVBN010000000, and consists of
            sequences JBWVBN010000001-JBWVBN010000002.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: the Oxford Nanopore Technologies
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863515.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:38:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,425
            CDSs (total)                      :: 4,262
            Genes (coding)                    :: 4,229
            CDSs (with protein)               :: 4,229
            Genes (RNA)                       :: 163
            rRNAs                             :: 11, 10, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 11, 10, 10 (5S, 16S, 23S)
            tRNAs                             :: 124
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 5 of 33
            Pseudo Genes (incomplete)         :: 26 of 33
            Pseudo Genes (internal stop)      :: 3 of 33
            Pseudo Genes (multiple problems)  :: 1 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4698475
                     /organism="Aeromonas caviae"
                     /mol_type="genomic DNA"
                     /strain="K1143"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:648"
                     /geo_loc_name="China: Anhui"
                     /lat_lon="31 N 116 E"
                     /collection_date="2023"
                     /collected_by="Xinhua Luo"
WGS         JBWVBN010000001-JBWVBN010000002
WGS_SCAFLD  NZ_CM166508
WGS_SCAFLD  NZ_JBWVBN010000002
//
LOCUS       NZ_JBSYSU010000000   5488672 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SHA3cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSU000000000
VERSION     NZ_JBSYSU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364816
            Assembly: GCF_056860695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5488672)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5488672)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSU000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSU000000000.  This version of the project
            (01) has the accession number NZ_JBSYSU010000000, and consists of
            sequences JBSYSU010000001-JBSYSU010000159.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 27x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860695.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:46:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,473
            CDSs (total)                      :: 5,383
            Genes (coding)                    :: 5,244
            CDSs (with protein)               :: 5,244
            Genes (RNA)                       :: 90
            rRNAs                             :: 2, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 139
            CDSs (without protein)            :: 139
            Pseudo Genes (ambiguous residues) :: 0 of 139
            Pseudo Genes (frameshifted)       :: 33 of 139
            Pseudo Genes (incomplete)         :: 103 of 139
            Pseudo Genes (internal stop)      :: 24 of 139
            Pseudo Genes (multiple problems)  :: 19 of 139
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5488672
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SHA3cef"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSU010000001-JBSYSU010000159
WGS_SCAFLD  NZ_JBSYSU010000001-NZ_JBSYSU010000159
//
LOCUS       NZ_JBXGIE010000000   4102341 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus pumilus strain SL25, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGIE000000000
VERSION     NZ_JBXGIE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772371
            Assembly: GCF_056855735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus pumilus
  ORGANISM  Bacillus pumilus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus.
REFERENCE   1  (bases 1 to 4102341)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGIE000000000.1.
            The Bacillus pumilus whole genome shotgun (WGS) project has the
            project accession NZ_JBXGIE000000000.  This version of the project
            (01) has the accession number NZ_JBXGIE010000000, and consists of
            sequences JBXGIE010000001-JBXGIE010000067.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855735.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:54:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,353
            CDSs (total)                      :: 4,293
            Genes (coding)                    :: 4,212
            CDSs (with protein)               :: 4,212
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 30 of 81
            Pseudo Genes (incomplete)         :: 49 of 81
            Pseudo Genes (internal stop)      :: 13 of 81
            Pseudo Genes (multiple problems)  :: 10 of 81
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4102341
                     /organism="Bacillus pumilus"
                     /mol_type="genomic DNA"
                     /strain="SL25"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:1408"
                     /geo_loc_name="USA: Sidney"
                     /lat_lon="47.71 N 104.16 W"
                     /collection_date="2022-09-25"
WGS         JBXGIE010000001-JBXGIE010000067
WGS_SCAFLD  NZ_JBXGIE010000001-NZ_JBXGIE010000067
//
LOCUS       NZ_JBSYTJ010000000   5065393 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter portucalensis strain 2RDA3mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYTJ000000000
VERSION     NZ_JBSYTJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364801
            Assembly: GCF_056860995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter portucalensis
  ORGANISM  Citrobacter portucalensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5065393)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5065393)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYTJ000000000.1.
            The Citrobacter portucalensis whole genome shotgun (WGS) project
            has the project accession NZ_JBSYTJ000000000.  This version of the
            project (01) has the accession number NZ_JBSYTJ010000000, and
            consists of sequences JBSYTJ010000001-JBSYTJ010000226.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 59x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860995.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:59:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,113
            CDSs (total)                      :: 5,017
            Genes (coding)                    :: 4,859
            CDSs (with protein)               :: 4,859
            Genes (RNA)                       :: 96
            rRNAs                             :: 3, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 158
            CDSs (without protein)            :: 158
            Pseudo Genes (ambiguous residues) :: 0 of 158
            Pseudo Genes (frameshifted)       :: 30 of 158
            Pseudo Genes (incomplete)         :: 127 of 158
            Pseudo Genes (internal stop)      :: 19 of 158
            Pseudo Genes (multiple problems)  :: 15 of 158
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5065393
                     /organism="Citrobacter portucalensis"
                     /mol_type="genomic DNA"
                     /strain="2RDA3mer"
                     /isolation_source="river downstream"
                     /db_xref="taxon:1639133"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYTJ010000001-JBSYTJ010000226
WGS_SCAFLD  NZ_JBSYTJ010000001-NZ_JBSYTJ010000226
//
LOCUS       NZ_JBSYSG010000000   5591744 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter portucalensis strain 2SHcef4cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSG000000000
VERSION     NZ_JBSYSG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364830
            Assembly: GCF_056860435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter portucalensis
  ORGANISM  Citrobacter portucalensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5591744)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5591744)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSG000000000.1.
            The Citrobacter portucalensis whole genome shotgun (WGS) project
            has the project accession NZ_JBSYSG000000000.  This version of the
            project (01) has the accession number NZ_JBSYSG010000000, and
            consists of sequences JBSYSG010000001-JBSYSG010000204.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860435.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:46:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,610
            CDSs (total)                      :: 5,517
            Genes (coding)                    :: 5,357
            CDSs (with protein)               :: 5,357
            Genes (RNA)                       :: 93
            rRNAs                             :: 5, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 160
            CDSs (without protein)            :: 160
            Pseudo Genes (ambiguous residues) :: 0 of 160
            Pseudo Genes (frameshifted)       :: 36 of 160
            Pseudo Genes (incomplete)         :: 122 of 160
            Pseudo Genes (internal stop)      :: 23 of 160
            Pseudo Genes (multiple problems)  :: 17 of 160
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5591744
                     /organism="Citrobacter portucalensis"
                     /mol_type="genomic DNA"
                     /strain="2SHcef4cef"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:1639133"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSG010000001-JBSYSG010000204
WGS_SCAFLD  NZ_JBSYSG010000001-NZ_JBSYSG010000204
//
LOCUS       NZ_JBSYSC010000000   5883412 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter braakii strain 2SHcefen1cefH, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSC000000000
VERSION     NZ_JBSYSC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364834
            Assembly: GCF_056860375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter braakii
  ORGANISM  Citrobacter braakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5883412)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5883412)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSC000000000.1.
            The Citrobacter braakii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSC000000000.  This version of the project
            (01) has the accession number NZ_JBSYSC010000000, and consists of
            sequences JBSYSC010000001-JBSYSC010001196.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 33x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860375.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:50:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,579
            CDSs (total)                      :: 6,486
            Genes (coding)                    :: 5,945
            CDSs (with protein)               :: 5,945
            Genes (RNA)                       :: 93
            rRNAs                             :: 2, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 541
            CDSs (without protein)            :: 541
            Pseudo Genes (ambiguous residues) :: 0 of 541
            Pseudo Genes (frameshifted)       :: 47 of 541
            Pseudo Genes (incomplete)         :: 493 of 541
            Pseudo Genes (internal stop)      :: 38 of 541
            Pseudo Genes (multiple problems)  :: 32 of 541
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5883412
                     /organism="Citrobacter braakii"
                     /mol_type="genomic DNA"
                     /strain="2SHcefen1cefH"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:57706"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSC010000001-JBSYSC010001196
WGS_SCAFLD  NZ_JBSYSC010000001-NZ_JBSYSC010001196
//
LOCUS       NZ_JBSYQV010000000   5194372 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SOA5cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYQV000000000
VERSION     NZ_JBSYQV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364867
            Assembly: GCF_056859675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5194372)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5194372)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYQV000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYQV000000000.  This version of the project
            (01) has the accession number NZ_JBSYQV010000000, and consists of
            sequences JBSYQV010000001-JBSYQV010000113.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 24x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859675.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:35:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,036
            CDSs (total)                      :: 4,940
            Genes (coding)                    :: 4,821
            CDSs (with protein)               :: 4,821
            Genes (RNA)                       :: 96
            rRNAs                             :: 2, 6, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 6, 4 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 36 of 119
            Pseudo Genes (incomplete)         :: 90 of 119
            Pseudo Genes (internal stop)      :: 19 of 119
            Pseudo Genes (multiple problems)  :: 23 of 119
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5194372
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SOA5cef"
                     /isolation_source="mWWTP outflow"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYQV010000001-JBSYQV010000113
WGS_SCAFLD  NZ_JBSYQV010000001-NZ_JBSYQV010000113
//
LOCUS       NZ_JBXGHW010000000   4152331 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus licheniformis strain SL32, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGHW000000000
VERSION     NZ_JBXGHW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772379
            Assembly: GCF_056855575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus licheniformis
  ORGANISM  Bacillus licheniformis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus.
REFERENCE   1  (bases 1 to 4152331)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGHW000000000.1.
            The Bacillus licheniformis whole genome shotgun (WGS) project has
            the project accession NZ_JBXGHW000000000.  This version of the
            project (01) has the accession number NZ_JBXGHW010000000, and
            consists of sequences JBXGHW010000001-JBXGHW010000029.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855575.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:02:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,294
            CDSs (total)                      :: 4,227
            Genes (coding)                    :: 4,123
            CDSs (with protein)               :: 4,123
            Genes (RNA)                       :: 67
            rRNAs                             :: 3, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 104
            CDSs (without protein)            :: 104
            Pseudo Genes (ambiguous residues) :: 0 of 104
            Pseudo Genes (frameshifted)       :: 54 of 104
            Pseudo Genes (incomplete)         :: 47 of 104
            Pseudo Genes (internal stop)      :: 17 of 104
            Pseudo Genes (multiple problems)  :: 13 of 104
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4152331
                     /organism="Bacillus licheniformis"
                     /mol_type="genomic DNA"
                     /strain="SL32"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:1402"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2022-12-17"
WGS         JBXGHW010000001-JBXGHW010000029
WGS_SCAFLD  NZ_JBXGHW010000001-NZ_JBXGHW010000029
//
LOCUS       NZ_JBSYQZ010000000   5216061 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter portucalensis strain 2SOA18mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYQZ000000000
VERSION     NZ_JBSYQZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364863
            Assembly: GCF_056859735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter portucalensis
  ORGANISM  Citrobacter portucalensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5216061)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5216061)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYQZ000000000.1.
            The Citrobacter portucalensis whole genome shotgun (WGS) project
            has the project accession NZ_JBSYQZ000000000.  This version of the
            project (01) has the accession number NZ_JBSYQZ010000000, and
            consists of sequences JBSYQZ010000001-JBSYQZ010000137.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 47x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859735.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:49:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,152
            CDSs (total)                      :: 5,063
            Genes (coding)                    :: 4,904
            CDSs (with protein)               :: 4,904
            Genes (RNA)                       :: 89
            rRNAs                             :: 2, 5, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 5, 2 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 159
            CDSs (without protein)            :: 159
            Pseudo Genes (ambiguous residues) :: 0 of 159
            Pseudo Genes (frameshifted)       :: 47 of 159
            Pseudo Genes (incomplete)         :: 103 of 159
            Pseudo Genes (internal stop)      :: 23 of 159
            Pseudo Genes (multiple problems)  :: 13 of 159
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5216061
                     /organism="Citrobacter portucalensis"
                     /mol_type="genomic DNA"
                     /strain="2SOA18mer"
                     /isolation_source="mWWTP outflow"
                     /db_xref="taxon:1639133"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYQZ010000001-JBSYQZ010000137
WGS_SCAFLD  NZ_JBSYQZ010000001-NZ_JBSYQZ010000137
//
LOCUS       NZ_JBSYTA010000000   5788353 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SHA12cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYTA000000000
VERSION     NZ_JBSYTA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364810
            Assembly: GCF_056860835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5788353)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5788353)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYTA000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYTA000000000.  This version of the project
            (01) has the accession number NZ_JBSYTA010000000, and consists of
            sequences JBSYTA010000001-JBSYTA010000206.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 47x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860835.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:55:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,765
            CDSs (total)                      :: 5,669
            Genes (coding)                    :: 5,475
            CDSs (with protein)               :: 5,475
            Genes (RNA)                       :: 96
            rRNAs                             :: 2, 3, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 8 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 194
            CDSs (without protein)            :: 194
            Pseudo Genes (ambiguous residues) :: 0 of 194
            Pseudo Genes (frameshifted)       :: 35 of 194
            Pseudo Genes (incomplete)         :: 161 of 194
            Pseudo Genes (internal stop)      :: 18 of 194
            Pseudo Genes (multiple problems)  :: 19 of 194
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5788353
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SHA12cef"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYTA010000001-JBSYTA010000206
WGS_SCAFLD  NZ_JBSYTA010000001-NZ_JBSYTA010000206
//
LOCUS       NZ_JBSYTF010000000   5149295 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2RUA4mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYTF000000000
VERSION     NZ_JBSYTF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364805
            Assembly: GCF_056860935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5149295)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5149295)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYTF000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYTF000000000.  This version of the project
            (01) has the accession number NZ_JBSYTF010000000, and consists of
            sequences JBSYTF010000001-JBSYTF010000181.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 39x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860935.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:44:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,071
            CDSs (total)                      :: 4,978
            Genes (coding)                    :: 4,858
            CDSs (with protein)               :: 4,858
            Genes (RNA)                       :: 93
            rRNAs                             :: 3, 5, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 5, 6 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 120
            CDSs (without protein)            :: 120
            Pseudo Genes (ambiguous residues) :: 0 of 120
            Pseudo Genes (frameshifted)       :: 30 of 120
            Pseudo Genes (incomplete)         :: 96 of 120
            Pseudo Genes (internal stop)      :: 15 of 120
            Pseudo Genes (multiple problems)  :: 21 of 120
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5149295
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2RUA4mer"
                     /isolation_source="river upstream"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYTF010000001-JBSYTF010000181
WGS_SCAFLD  NZ_JBSYTF010000001-NZ_JBSYTF010000181
//
LOCUS       NZ_JBXEOX010000000   7838155 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia sp. L-4, whole genome shotgun sequencing project.
ACCESSION   NZ_JBXEOX000000000
VERSION     NZ_JBXEOX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN57193936
            Assembly: GCF_056856535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia sp. L-4
  ORGANISM  Burkholderia sp. L-4
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 7838155)
  AUTHORS   Ouyang,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-APR-2026) College of Food Science and Engineering,
            Henan University of Technology, Fengyang Street, zhengzhou, Henan
            450001, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEOX000000000.1.
            The Burkholderia sp. L-4 whole genome shotgun (WGS) project has the
            project accession NZ_JBXEOX000000000.  This version of the project
            (01) has the accession number NZ_JBXEOX010000000, and consists of
            sequences JBXEOX010000001-JBXEOX010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: FEB-2025
            Assembly Method        :: BUSCO v. v6.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 99.97x
            Sequencing Technology  :: PacBio RS
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856535.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:35:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,187
            CDSs (total)                      :: 7,094
            Genes (coding)                    :: 6,953
            CDSs (with protein)               :: 6,953
            Genes (RNA)                       :: 93
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 141
            CDSs (without protein)            :: 141
            Pseudo Genes (ambiguous residues) :: 0 of 141
            Pseudo Genes (frameshifted)       :: 56 of 141
            Pseudo Genes (incomplete)         :: 107 of 141
            Pseudo Genes (internal stop)      :: 18 of 141
            Pseudo Genes (multiple problems)  :: 36 of 141
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7838155
                     /organism="Burkholderia sp. L-4"
                     /mol_type="genomic DNA"
                     /strain="L-4"
                     /host="Nicotiana tabacum"
                     /db_xref="taxon:3699895"
                     /geo_loc_name="Zimbabwe"
                     /collection_date="2025-01-01"
WGS         JBXEOX010000001-JBXEOX010000004
WGS_SCAFLD  NZ_JBXEOX010000001-NZ_JBXEOX010000004
//
LOCUS       NZ_JBSYTD010000000   5158553 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2RUA6mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYTD000000000
VERSION     NZ_JBSYTD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364807
            Assembly: GCF_056860895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5158553)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5158553)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYTD000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYTD000000000.  This version of the project
            (01) has the accession number NZ_JBSYTD010000000, and consists of
            sequences JBSYTD010000001-JBSYTD010000078.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 47x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860895.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:50:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,061
            CDSs (total)                      :: 4,970
            Genes (coding)                    :: 4,861
            CDSs (with protein)               :: 4,861
            Genes (RNA)                       :: 91
            rRNAs                             :: 3, 5, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 5, 1 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 35 of 109
            Pseudo Genes (incomplete)         :: 81 of 109
            Pseudo Genes (internal stop)      :: 13 of 109
            Pseudo Genes (multiple problems)  :: 18 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5158553
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2RUA6mer"
                     /isolation_source="river upstream"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYTD010000001-JBSYTD010000078
WGS_SCAFLD  NZ_JBSYTD010000001-NZ_JBSYTD010000078
//
LOCUS       NZ_JBSYQT010000000   5289323 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter braakii strain 2SOB4mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYQT000000000
VERSION     NZ_JBSYQT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364869
            Assembly: GCF_056859655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter braakii
  ORGANISM  Citrobacter braakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5289323)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5289323)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYQT000000000.1.
            The Citrobacter braakii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYQT000000000.  This version of the project
            (01) has the accession number NZ_JBSYQT010000000, and consists of
            sequences JBSYQT010000001-JBSYQT010000185.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 42x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859655.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:33:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,340
            CDSs (total)                      :: 5,251
            Genes (coding)                    :: 5,084
            CDSs (with protein)               :: 5,084
            Genes (RNA)                       :: 89
            rRNAs                             :: 2, 5, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 5 (5S, 16S)
            tRNAs                             :: 74
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 167
            CDSs (without protein)            :: 167
            Pseudo Genes (ambiguous residues) :: 0 of 167
            Pseudo Genes (frameshifted)       :: 39 of 167
            Pseudo Genes (incomplete)         :: 123 of 167
            Pseudo Genes (internal stop)      :: 25 of 167
            Pseudo Genes (multiple problems)  :: 16 of 167
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5289323
                     /organism="Citrobacter braakii"
                     /mol_type="genomic DNA"
                     /strain="2SOB4mer"
                     /isolation_source="mWWTP outflow"
                     /db_xref="taxon:57706"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYQT010000001-JBSYQT010000185
WGS_SCAFLD  NZ_JBSYQT010000001-NZ_JBSYQT010000185
//
LOCUS       NZ_JBSYRT010000000   5505973 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter pasteurii strain 2SIA3cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRT000000000
VERSION     NZ_JBSYRT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364843
            Assembly: GCF_056860175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter pasteurii
  ORGANISM  Citrobacter pasteurii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter.
REFERENCE   1  (bases 1 to 5505973)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5505973)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRT000000000.1.
            The Citrobacter pasteurii whole genome shotgun (WGS) project has
            the project accession NZ_JBSYRT000000000.  This version of the
            project (01) has the accession number NZ_JBSYRT010000000, and
            consists of sequences JBSYRT010000001-JBSYRT010000130.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 41x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860175.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:51:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,465
            CDSs (total)                      :: 5,374
            Genes (coding)                    :: 5,238
            CDSs (with protein)               :: 5,238
            Genes (RNA)                       :: 91
            rRNAs                             :: 3, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 136
            CDSs (without protein)            :: 136
            Pseudo Genes (ambiguous residues) :: 0 of 136
            Pseudo Genes (frameshifted)       :: 45 of 136
            Pseudo Genes (incomplete)         :: 99 of 136
            Pseudo Genes (internal stop)      :: 19 of 136
            Pseudo Genes (multiple problems)  :: 23 of 136
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5505973
                     /organism="Citrobacter pasteurii"
                     /mol_type="genomic DNA"
                     /strain="2SIA3cef"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:1563222"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRT010000001-JBSYRT010000130
WGS_SCAFLD  NZ_JBSYRT010000001-NZ_JBSYRT010000130
//
LOCUS       NZ_JBSYRR010000000   5607844 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SIA4cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRR000000000
VERSION     NZ_JBSYRR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364845
            Assembly: GCF_056860135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5607844)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5607844)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRR000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYRR000000000.  This version of the project
            (01) has the accession number NZ_JBSYRR010000000, and consists of
            sequences JBSYRR010000001-JBSYRR010000185.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 42x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860135.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:49:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,579
            CDSs (total)                      :: 5,488
            Genes (coding)                    :: 5,329
            CDSs (with protein)               :: 5,329
            Genes (RNA)                       :: 91
            rRNAs                             :: 3, 3, 5 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 3, 5 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 159
            CDSs (without protein)            :: 159
            Pseudo Genes (ambiguous residues) :: 0 of 159
            Pseudo Genes (frameshifted)       :: 46 of 159
            Pseudo Genes (incomplete)         :: 115 of 159
            Pseudo Genes (internal stop)      :: 26 of 159
            Pseudo Genes (multiple problems)  :: 23 of 159
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5607844
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SIA4cef"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRR010000001-JBSYRR010000185
WGS_SCAFLD  NZ_JBSYRR010000001-NZ_JBSYRR010000185
//
LOCUS       NZ_JBXEQH010000000   3639348 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Cellulosimicrobium cellulans strain CC15Q1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXEQH000000000
VERSION     NZ_JBXEQH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56418703
            Assembly: GCF_056858275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cellulosimicrobium cellulans
  ORGANISM  Cellulosimicrobium cellulans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Promicromonosporaceae; Cellulosimicrobium.
REFERENCE   1  (bases 1 to 3639348)
  AUTHORS   Haak,D.C.
  TITLE     Emma and Mychala sequence additions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3639348)
  AUTHORS   Haak,D.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2026) Biological Sciences, Virginia Tech, 926
            West Campus Drive, Blacksburg, VA 24061, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEQH000000000.1.
            The Cellulosimicrobium cellulans whole genome shotgun (WGS) project
            has the project accession NZ_JBXEQH000000000.  This version of the
            project (01) has the accession number NZ_JBXEQH010000000, and
            consists of sequence JBXEQH010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: MAY-2021
            Assembly Method           :: Canu v. 1
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NA
            Genome Coverage           :: 50x
            Sequencing Technology     :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858275.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:23:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,277
            CDSs (total)                      :: 3,212
            Genes (coding)                    :: 3,175
            CDSs (with protein)               :: 3,175
            Genes (RNA)                       :: 65
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 14 of 37
            Pseudo Genes (incomplete)         :: 26 of 37
            Pseudo Genes (internal stop)      :: 2 of 37
            Pseudo Genes (multiple problems)  :: 5 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3639348
                     /organism="Cellulosimicrobium cellulans"
                     /mol_type="genomic DNA"
                     /strain="CC15Q1"
                     /isolation_source="field"
                     /host="amphibian"
                     /db_xref="taxon:1710"
                     /geo_loc_name="USA: Virginia,Blacksburg"
                     /lat_lon="37.229572 N 80.413840 W"
                     /collection_date="2012"
WGS         JBXEQH010000001
WGS_SCAFLD  NZ_JBXEQH010000001
//
LOCUS       NZ_JBSYSX010000000   5481253 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter gillenii strain 2SHA16mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSX000000000
VERSION     NZ_JBSYSX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364813
            Assembly: GCF_056860755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter gillenii
  ORGANISM  Citrobacter gillenii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5481253)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5481253)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSX000000000.1.
            The Citrobacter gillenii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSX000000000.  This version of the project
            (01) has the accession number NZ_JBSYSX010000000, and consists of
            sequences JBSYSX010000001-JBSYSX010000150.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 43x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860755.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:49:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,462
            CDSs (total)                      :: 5,370
            Genes (coding)                    :: 5,209
            CDSs (with protein)               :: 5,209
            Genes (RNA)                       :: 92
            rRNAs                             :: 3, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 161
            CDSs (without protein)            :: 161
            Pseudo Genes (ambiguous residues) :: 0 of 161
            Pseudo Genes (frameshifted)       :: 43 of 161
            Pseudo Genes (incomplete)         :: 116 of 161
            Pseudo Genes (internal stop)      :: 23 of 161
            Pseudo Genes (multiple problems)  :: 17 of 161
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5481253
                     /organism="Citrobacter gillenii"
                     /mol_type="genomic DNA"
                     /strain="2SHA16mer"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:67828"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSX010000001-JBSYSX010000150
WGS_SCAFLD  NZ_JBSYSX010000001-NZ_JBSYSX010000150
//
LOCUS       NZ_JBXGHX010000000   3681499 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus safensis strain SL31, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGHX000000000
VERSION     NZ_JBXGHX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772378
            Assembly: GCF_056855615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus safensis
  ORGANISM  Bacillus safensis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus.
REFERENCE   1  (bases 1 to 3681499)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGHX000000000.1.
            The Bacillus safensis whole genome shotgun (WGS) project has the
            project accession NZ_JBXGHX000000000.  This version of the project
            (01) has the accession number NZ_JBXGHX010000000, and consists of
            sequences JBXGHX010000001-JBXGHX010000030.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855615.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:54:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,795
            CDSs (total)                      :: 3,727
            Genes (coding)                    :: 3,682
            CDSs (with protein)               :: 3,682
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 1 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 45
            CDSs (without protein)            :: 45
            Pseudo Genes (ambiguous residues) :: 0 of 45
            Pseudo Genes (frameshifted)       :: 15 of 45
            Pseudo Genes (incomplete)         :: 33 of 45
            Pseudo Genes (internal stop)      :: 8 of 45
            Pseudo Genes (multiple problems)  :: 10 of 45
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3681499
                     /organism="Bacillus safensis"
                     /mol_type="genomic DNA"
                     /strain="SL31"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:561879"
                     /geo_loc_name="USA: Sidney"
                     /lat_lon="47.71 N 104.16 W"
                     /collection_date="2022-09-25"
WGS         JBXGHX010000001-JBXGHX010000030
WGS_SCAFLD  NZ_JBXGHX010000001-NZ_JBXGHX010000030
//
LOCUS       NZ_JBTYJI010000000   1455369 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bartonella bacilliformis strain UPCH_1416, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBTYJI000000000
VERSION     NZ_JBTYJI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54879617
            Assembly: GCF_056865935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bartonella bacilliformis
  ORGANISM  Bartonella bacilliformis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Bartonellaceae; Bartonella.
REFERENCE   1  (bases 1 to 1455369)
  AUTHORS   Solis Cayo,L.A., Castillo Vilcahuaman,C., Cuicapuza,D. and
            Tsukayama,P.
  TITLE     Genomic and functional characterization of clinical isolates of
            Bartonella spp. causing Carrion's disease in Peru
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1455369)
  AUTHORS   Solis Cayo,L.A., Castillo Vilcahuaman,C., Cuicapuza,D. and
            Tsukayama,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JAN-2026) Facultad de Ciencias e Ingenieria,
            Universidad Peruana Cayetano Heredia, Av. Honorio Delgado 430 San
            Martin de Porres, Lima, Lima 150135, Peru
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTYJI000000000.1.
            The Bartonella bacilliformis whole genome shotgun (WGS) project has
            the project accession NZ_JBTYJI000000000.  This version of the
            project (01) has the accession number NZ_JBTYJI010000000, and
            consists of sequences JBTYJI010000001-JBTYJI010000022.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 17-JUL-2025
            Assembly Method        :: SPAdes v. 4.2.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 97.405x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865935.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:45:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,287
            CDSs (total)                      :: 1,240
            Genes (coding)                    :: 1,193
            CDSs (with protein)               :: 1,193
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 47
            CDSs (without protein)            :: 47
            Pseudo Genes (ambiguous residues) :: 0 of 47
            Pseudo Genes (frameshifted)       :: 31 of 47
            Pseudo Genes (incomplete)         :: 23 of 47
            Pseudo Genes (internal stop)      :: 16 of 47
            Pseudo Genes (multiple problems)  :: 16 of 47
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1455369
                     /organism="Bartonella bacilliformis"
                     /mol_type="genomic DNA"
                     /strain="UPCH_1416"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:774"
                     /geo_loc_name="Peru: Ancash"
                     /lat_lon="9.5278 S 77.5278 W"
                     /collection_date="2003"
                     /collected_by="UPCH"
WGS         JBTYJI010000001-JBTYJI010000022
WGS_SCAFLD  NZ_JBTYJI010000001-NZ_JBTYJI010000022
//
LOCUS       NZ_JBSYTH010000000   4887383 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2RUA10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSYTH000000000
VERSION     NZ_JBSYTH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364803
            Assembly: GCF_056860955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 4887383)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4887383)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYTH000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYTH000000000.  This version of the project
            (01) has the accession number NZ_JBSYTH010000000, and consists of
            sequences JBSYTH010000001-JBSYTH010000029.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 21x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860955.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:41:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,722
            CDSs (total)                      :: 4,626
            Genes (coding)                    :: 4,563
            CDSs (with protein)               :: 4,563
            Genes (RNA)                       :: 96
            rRNAs                             :: 3, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 4, 3 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 21 of 63
            Pseudo Genes (incomplete)         :: 40 of 63
            Pseudo Genes (internal stop)      :: 13 of 63
            Pseudo Genes (multiple problems)  :: 11 of 63
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4887383
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2RUA10"
                     /isolation_source="river upstream"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYTH010000001-JBSYTH010000029
WGS_SCAFLD  NZ_JBSYTH010000001-NZ_JBSYTH010000029
//
LOCUS       NZ_JBTYJH010000000   1431569 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bartonella bacilliformis strain UPCH_B10, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBTYJH000000000
VERSION     NZ_JBTYJH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54879616
            Assembly: GCF_056865955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bartonella bacilliformis
  ORGANISM  Bartonella bacilliformis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Bartonellaceae; Bartonella.
REFERENCE   1  (bases 1 to 1431569)
  AUTHORS   Solis Cayo,L.A., Castillo Vilcahuaman,C., Cuicapuza,D. and
            Tsukayama,P.
  TITLE     Genomic and functional characterization of clinical isolates of
            Bartonella spp. causing Carrion's disease in Peru
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1431569)
  AUTHORS   Solis Cayo,L.A., Castillo Vilcahuaman,C., Cuicapuza,D. and
            Tsukayama,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JAN-2026) Facultad de Ciencias e Ingenieria,
            Universidad Peruana Cayetano Heredia, Av. Honorio Delgado 430 San
            Martin de Porres, Lima, Lima 150135, Peru
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTYJH000000000.1.
            The Bartonella bacilliformis whole genome shotgun (WGS) project has
            the project accession NZ_JBTYJH000000000.  This version of the
            project (01) has the accession number NZ_JBTYJH010000000, and
            consists of sequences JBTYJH010000001-JBTYJH010000017.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 17-JUL-2025
            Assembly Method        :: SPAdes v. 4.2.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 38.313x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865955.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:37:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,264
            CDSs (total)                      :: 1,218
            Genes (coding)                    :: 1,173
            CDSs (with protein)               :: 1,173
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 45
            CDSs (without protein)            :: 45
            Pseudo Genes (ambiguous residues) :: 0 of 45
            Pseudo Genes (frameshifted)       :: 30 of 45
            Pseudo Genes (incomplete)         :: 24 of 45
            Pseudo Genes (internal stop)      :: 14 of 45
            Pseudo Genes (multiple problems)  :: 18 of 45
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1431569
                     /organism="Bartonella bacilliformis"
                     /mol_type="genomic DNA"
                     /strain="UPCH_B10"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:774"
                     /geo_loc_name="Peru: Ancash"
                     /lat_lon="9.5278 S 77.5278 W"
                     /collection_date="2003"
                     /collected_by="UPCH"
WGS         JBTYJH010000001-JBTYJH010000017
WGS_SCAFLD  NZ_JBTYJH010000001-NZ_JBTYJH010000017
//
LOCUS       NZ_JBSYSI010000000   5406037 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SHcef2merB, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSI000000000
VERSION     NZ_JBSYSI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364828
            Assembly: GCF_056860475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5406037)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5406037)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSI000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSI000000000.  This version of the project
            (01) has the accession number NZ_JBSYSI010000000, and consists of
            sequences JBSYSI010000001-JBSYSI010000170.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 21x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860475.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:50:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,418
            CDSs (total)                      :: 5,319
            Genes (coding)                    :: 5,173
            CDSs (with protein)               :: 5,173
            Genes (RNA)                       :: 99
            rRNAs                             :: 3, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 146
            CDSs (without protein)            :: 146
            Pseudo Genes (ambiguous residues) :: 0 of 146
            Pseudo Genes (frameshifted)       :: 41 of 146
            Pseudo Genes (incomplete)         :: 102 of 146
            Pseudo Genes (internal stop)      :: 20 of 146
            Pseudo Genes (multiple problems)  :: 15 of 146
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5406037
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SHcef2merB"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSI010000001-JBSYSI010000170
WGS_SCAFLD  NZ_JBSYSI010000001-NZ_JBSYSI010000170
//
LOCUS       NZ_JBSYQY010000000   5608494 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter braakii strain 2SOA19merB, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYQY000000000
VERSION     NZ_JBSYQY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364864
            Assembly: GCF_056859755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter braakii
  ORGANISM  Citrobacter braakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5608494)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5608494)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYQY000000000.1.
            The Citrobacter braakii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYQY000000000.  This version of the project
            (01) has the accession number NZ_JBSYQY010000000, and consists of
            sequences JBSYQY010000001-JBSYQY010000161.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859755.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:51:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,583
            CDSs (total)                      :: 5,498
            Genes (coding)                    :: 5,320
            CDSs (with protein)               :: 5,320
            Genes (RNA)                       :: 85
            rRNAs                             :: 2, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 178
            CDSs (without protein)            :: 178
            Pseudo Genes (ambiguous residues) :: 0 of 178
            Pseudo Genes (frameshifted)       :: 35 of 178
            Pseudo Genes (incomplete)         :: 148 of 178
            Pseudo Genes (internal stop)      :: 25 of 178
            Pseudo Genes (multiple problems)  :: 25 of 178
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5608494
                     /organism="Citrobacter braakii"
                     /mol_type="genomic DNA"
                     /strain="2SOA19merB"
                     /isolation_source="mWWTP outflow"
                     /db_xref="taxon:57706"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYQY010000001-JBSYQY010000161
WGS_SCAFLD  NZ_JBSYQY010000001-NZ_JBSYQY010000161
//
LOCUS       NZ_JBSYTC010000000   5615211 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SHA10cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYTC000000000
VERSION     NZ_JBSYTC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364808
            Assembly: GCF_056860915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5615211)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5615211)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYTC000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYTC000000000.  This version of the project
            (01) has the accession number NZ_JBSYTC010000000, and consists of
            sequences JBSYTC010000001-JBSYTC010000107.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 36x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860915.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:57:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,630
            CDSs (total)                      :: 5,538
            Genes (coding)                    :: 5,369
            CDSs (with protein)               :: 5,369
            Genes (RNA)                       :: 92
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 4, 2 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 169
            CDSs (without protein)            :: 169
            Pseudo Genes (ambiguous residues) :: 0 of 169
            Pseudo Genes (frameshifted)       :: 47 of 169
            Pseudo Genes (incomplete)         :: 124 of 169
            Pseudo Genes (internal stop)      :: 36 of 169
            Pseudo Genes (multiple problems)  :: 30 of 169
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5615211
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SHA10cef"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYTC010000001-JBSYTC010000107
WGS_SCAFLD  NZ_JBSYTC010000001-NZ_JBSYTC010000107
//
LOCUS       NZ_JBSXOU010000000   3508387 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Calidifontibacillus erzurumensis strain 2BVCB6A, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBSXOU000000000
VERSION     NZ_JBSXOU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53542763
            Assembly: GCF_056861645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Calidifontibacillus erzurumensis
  ORGANISM  Calidifontibacillus erzurumensis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Calidifontibacillus/Schinkia group;
            Calidifontibacillus.
REFERENCE   1  (bases 1 to 3508387)
  AUTHORS   Dholiya,K. and Pandya,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Microbiology, Arts, Science and Commerce
            College Kholwad, Kamrej Cross Road, Kholwad, Surat 394185, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXOU000000000.1.
            The Calidifontibacillus erzurumensis whole genome shotgun (WGS)
            project has the project accession NZ_JBSXOU000000000.  This version
            of the project (01) has the accession number NZ_JBSXOU010000000,
            and consists of sequences JBSXOU010000001-JBSXOU010000082.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 11.25
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50.0x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861645.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:46:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,403
            CDSs (total)                      :: 3,315
            Genes (coding)                    :: 3,268
            CDSs (with protein)               :: 3,268
            Genes (RNA)                       :: 88
            rRNAs                             :: 6, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 74
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 47
            CDSs (without protein)            :: 47
            Pseudo Genes (ambiguous residues) :: 0 of 47
            Pseudo Genes (frameshifted)       :: 23 of 47
            Pseudo Genes (incomplete)         :: 38 of 47
            Pseudo Genes (internal stop)      :: 4 of 47
            Pseudo Genes (multiple problems)  :: 15 of 47
            CRISPR Arrays                     :: 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3508387
                     /organism="Calidifontibacillus erzurumensis"
                     /mol_type="genomic DNA"
                     /strain="2BVCB6A"
                     /isolation_source="Grass lands"
                     /db_xref="taxon:2741433"
                     /geo_loc_name="India: Akotadar"
                     /lat_lon="22.70905390 N 71.67551800 E"
                     /collection_date="2021"
                     /collected_by="Krunalkumar Dholiya"
WGS         JBSXOU010000001-JBSXOU010000082
WGS_SCAFLD  NZ_JBSXOU010000001-NZ_JBSXOU010000082
//
LOCUS       NZ_JBSYTL010000000   5213737 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2RDA1cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYTL000000000
VERSION     NZ_JBSYTL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364799
            Assembly: GCF_056861095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5213737)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5213737)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYTL000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYTL000000000.  This version of the project
            (01) has the accession number NZ_JBSYTL010000000, and consists of
            sequences JBSYTL010000001-JBSYTL010000081.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861095.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:56:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,104
            CDSs (total)                      :: 5,009
            Genes (coding)                    :: 4,894
            CDSs (with protein)               :: 4,894
            Genes (RNA)                       :: 95
            rRNAs                             :: 2, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 4, 5 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 41 of 115
            Pseudo Genes (incomplete)         :: 79 of 115
            Pseudo Genes (internal stop)      :: 22 of 115
            Pseudo Genes (multiple problems)  :: 23 of 115
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5213737
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2RDA1cef"
                     /isolation_source="river downstream"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYTL010000001-JBSYTL010000081
WGS_SCAFLD  NZ_JBSYTL010000001-NZ_JBSYTL010000081
//
LOCUS       NZ_JBSYRY010000000   5079038 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SIA12cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRY000000000
VERSION     NZ_JBSYRY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364838
            Assembly: GCF_056860255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5079038)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5079038)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRY000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYRY000000000.  This version of the project
            (01) has the accession number NZ_JBSYRY010000000, and consists of
            sequences JBSYRY010000001-JBSYRY010000148.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 48x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860255.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:50:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,976
            CDSs (total)                      :: 4,874
            Genes (coding)                    :: 4,745
            CDSs (with protein)               :: 4,745
            Genes (RNA)                       :: 102
            rRNAs                             :: 2, 5, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 5, 6 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 129
            CDSs (without protein)            :: 129
            Pseudo Genes (ambiguous residues) :: 0 of 129
            Pseudo Genes (frameshifted)       :: 32 of 129
            Pseudo Genes (incomplete)         :: 99 of 129
            Pseudo Genes (internal stop)      :: 20 of 129
            Pseudo Genes (multiple problems)  :: 20 of 129
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5079038
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SIA12cef"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRY010000001-JBSYRY010000148
WGS_SCAFLD  NZ_JBSYRY010000001-NZ_JBSYRY010000148
//
LOCUS       NZ_JBSYRP010000000   5104679 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SIA5cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRP000000000
VERSION     NZ_JBSYRP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364847
            Assembly: GCF_056860095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5104679)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5104679)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRP000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYRP000000000.  This version of the project
            (01) has the accession number NZ_JBSYRP010000000, and consists of
            sequences JBSYRP010000001-JBSYRP010000098.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860095.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:47:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,875
            Genes (coding)                    :: 4,776
            CDSs (with protein)               :: 4,776
            Genes (RNA)                       :: 95
            rRNAs                             :: 2, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 4, 5 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 99
            CDSs (without protein)            :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 28 of 99
            Pseudo Genes (incomplete)         :: 76 of 99
            Pseudo Genes (internal stop)      :: 16 of 99
            Pseudo Genes (multiple problems)  :: 19 of 99
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5104679
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SIA5cef"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRP010000001-JBSYRP010000098
WGS_SCAFLD  NZ_JBSYRP010000001-NZ_JBSYRP010000098
//
LOCUS       NZ_JBSYTE010000000   5064672 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2RUA5mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYTE000000000
VERSION     NZ_JBSYTE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364806
            Assembly: GCF_056860875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5064672)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5064672)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYTE000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYTE000000000.  This version of the project
            (01) has the accession number NZ_JBSYTE010000000, and consists of
            sequences JBSYTE010000001-JBSYTE010000057.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 38x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860875.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:56:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,910
            CDSs (total)                      :: 4,821
            Genes (coding)                    :: 4,736
            CDSs (with protein)               :: 4,736
            Genes (RNA)                       :: 89
            rRNAs                             :: 2, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 85
            CDSs (without protein)            :: 85
            Pseudo Genes (ambiguous residues) :: 0 of 85
            Pseudo Genes (frameshifted)       :: 32 of 85
            Pseudo Genes (incomplete)         :: 52 of 85
            Pseudo Genes (internal stop)      :: 14 of 85
            Pseudo Genes (multiple problems)  :: 13 of 85
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5064672
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2RUA5mer"
                     /isolation_source="river upstream"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYTE010000001-JBSYTE010000057
WGS_SCAFLD  NZ_JBSYTE010000001-NZ_JBSYTE010000057
//
LOCUS       NZ_JBXGHV010000000   4290990 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus licheniformis strain SL33, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGHV000000000
VERSION     NZ_JBXGHV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772380
            Assembly: GCF_056855555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus licheniformis
  ORGANISM  Bacillus licheniformis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus.
REFERENCE   1  (bases 1 to 4290990)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGHV000000000.1.
            The Bacillus licheniformis whole genome shotgun (WGS) project has
            the project accession NZ_JBXGHV000000000.  This version of the
            project (01) has the accession number NZ_JBXGHV010000000, and
            consists of sequences JBXGHV010000001-JBXGHV010000027.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855555.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:53:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,498
            CDSs (total)                      :: 4,429
            Genes (coding)                    :: 4,318
            CDSs (with protein)               :: 4,318
            Genes (RNA)                       :: 69
            rRNAs                             :: 3, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 3, 4 (5S, 16S)
            tRNAs                             :: 56
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 59 of 111
            Pseudo Genes (incomplete)         :: 51 of 111
            Pseudo Genes (internal stop)      :: 19 of 111
            Pseudo Genes (multiple problems)  :: 17 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4290990
                     /organism="Bacillus licheniformis"
                     /mol_type="genomic DNA"
                     /strain="SL33"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:1402"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2023-09-15"
WGS         JBXGHV010000001-JBXGHV010000027
WGS_SCAFLD  NZ_JBXGHV010000001-NZ_JBXGHV010000027
//
LOCUS       NZ_JBSYRL010000000   5316647 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SIB2mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRL000000000
VERSION     NZ_JBSYRL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364851
            Assembly: GCF_056860015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5316647)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5316647)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRL000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYRL000000000.  This version of the project
            (01) has the accession number NZ_JBSYRL010000000, and consists of
            sequences JBSYRL010000001-JBSYRL010000168.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 48x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860015.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:39:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,311
            CDSs (total)                      :: 5,222
            Genes (coding)                    :: 5,069
            CDSs (with protein)               :: 5,069
            Genes (RNA)                       :: 89
            rRNAs                             :: 3, 6, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 6, 3 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 153
            CDSs (without protein)            :: 153
            Pseudo Genes (ambiguous residues) :: 0 of 153
            Pseudo Genes (frameshifted)       :: 35 of 153
            Pseudo Genes (incomplete)         :: 122 of 153
            Pseudo Genes (internal stop)      :: 18 of 153
            Pseudo Genes (multiple problems)  :: 19 of 153
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5316647
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SIB2mer"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRL010000001-JBSYRL010000168
WGS_SCAFLD  NZ_JBSYRL010000001-NZ_JBSYRL010000168
//
LOCUS       NZ_JBSYTI010000000   5303057 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter portucalensis strain 2RDA8mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYTI000000000
VERSION     NZ_JBSYTI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364802
            Assembly: GCF_056861015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter portucalensis
  ORGANISM  Citrobacter portucalensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5303057)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5303057)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYTI000000000.1.
            The Citrobacter portucalensis whole genome shotgun (WGS) project
            has the project accession NZ_JBSYTI000000000.  This version of the
            project (01) has the accession number NZ_JBSYTI010000000, and
            consists of sequences JBSYTI010000001-JBSYTI010000355.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 63x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861015.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:04:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,352
            CDSs (total)                      :: 5,259
            Genes (coding)                    :: 5,063
            CDSs (with protein)               :: 5,063
            Genes (RNA)                       :: 93
            rRNAs                             :: 3, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 196
            CDSs (without protein)            :: 196
            Pseudo Genes (ambiguous residues) :: 0 of 196
            Pseudo Genes (frameshifted)       :: 36 of 196
            Pseudo Genes (incomplete)         :: 157 of 196
            Pseudo Genes (internal stop)      :: 23 of 196
            Pseudo Genes (multiple problems)  :: 16 of 196
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5303057
                     /organism="Citrobacter portucalensis"
                     /mol_type="genomic DNA"
                     /strain="2RDA8mer"
                     /isolation_source="river downstream"
                     /db_xref="taxon:1639133"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYTI010000001-JBSYTI010000355
WGS_SCAFLD  NZ_JBSYTI010000001-NZ_JBSYTI010000355
//
LOCUS       NZ_JBSXNV010000000   3989801 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aliiroseovarius sp. B-4, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXNV000000000
VERSION     NZ_JBSXNV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312065
            Assembly: GCF_056857795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aliiroseovarius sp. B-4
  ORGANISM  Aliiroseovarius sp. B-4
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Aliiroseovarius.
REFERENCE   1  (bases 1 to 3989801)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXNV000000000.1.
            The Aliiroseovarius sp. B-4 whole genome shotgun (WGS) project has
            the project accession NZ_JBSXNV000000000.  This version of the
            project (01) has the accession number NZ_JBSXNV010000000, and
            consists of sequences JBSXNV010000001-JBSXNV010000042.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 296.94x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857795.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:16:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,934
            CDSs (total)                      :: 3,883
            Genes (coding)                    :: 3,831
            CDSs (with protein)               :: 3,831
            Genes (RNA)                       :: 51
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 14 of 52
            Pseudo Genes (incomplete)         :: 46 of 52
            Pseudo Genes (internal stop)      :: 4 of 52
            Pseudo Genes (multiple problems)  :: 10 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3989801
                     /organism="Aliiroseovarius sp. B-4"
                     /mol_type="genomic DNA"
                     /strain="B-4"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472684"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.71773 N 63.86117 E"
                     /collection_date="2022-06"
WGS         JBSXNV010000001-JBSXNV010000042
WGS_SCAFLD  NZ_JBSXNV010000001-NZ_JBSXNV010000042
//
LOCUS       NZ_JBSYRV010000000   5212106 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter portucalensis strain 2SIA2cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRV000000000
VERSION     NZ_JBSYRV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364841
            Assembly: GCF_056860215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter portucalensis
  ORGANISM  Citrobacter portucalensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5212106)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5212106)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRV000000000.1.
            The Citrobacter portucalensis whole genome shotgun (WGS) project
            has the project accession NZ_JBSYRV000000000.  This version of the
            project (01) has the accession number NZ_JBSYRV010000000, and
            consists of sequences JBSYRV010000001-JBSYRV010000131.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 53x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860215.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:47:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,123
            CDSs (total)                      :: 5,033
            Genes (coding)                    :: 4,892
            CDSs (with protein)               :: 4,892
            Genes (RNA)                       :: 90
            rRNAs                             :: 3, 5, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 5, 3 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 141
            CDSs (without protein)            :: 141
            Pseudo Genes (ambiguous residues) :: 0 of 141
            Pseudo Genes (frameshifted)       :: 37 of 141
            Pseudo Genes (incomplete)         :: 95 of 141
            Pseudo Genes (internal stop)      :: 22 of 141
            Pseudo Genes (multiple problems)  :: 12 of 141
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5212106
                     /organism="Citrobacter portucalensis"
                     /mol_type="genomic DNA"
                     /strain="2SIA2cef"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:1639133"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRV010000001-JBSYRV010000131
WGS_SCAFLD  NZ_JBSYRV010000001-NZ_JBSYRV010000131
//
LOCUS       NZ_JBSYRI010000000   5238827 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SIB4cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRI000000000
VERSION     NZ_JBSYRI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364854
            Assembly: GCF_056859935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5238827)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5238827)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRI000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYRI000000000.  This version of the project
            (01) has the accession number NZ_JBSYRI010000000, and consists of
            sequences JBSYRI010000001-JBSYRI010000078.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859935.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:43:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,101
            CDSs (total)                      :: 5,008
            Genes (coding)                    :: 4,913
            CDSs (with protein)               :: 4,913
            Genes (RNA)                       :: 93
            rRNAs                             :: 3, 5, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 5, 7 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 95
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 26 of 95
            Pseudo Genes (incomplete)         :: 64 of 95
            Pseudo Genes (internal stop)      :: 21 of 95
            Pseudo Genes (multiple problems)  :: 14 of 95
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5238827
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SIB4cef"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRI010000001-JBSYRI010000078
WGS_SCAFLD  NZ_JBSYRI010000001-NZ_JBSYRI010000078
//
LOCUS       NZ_JBSYRB010000000   5125300 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter portucalensis strain 2SOA14mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRB000000000
VERSION     NZ_JBSYRB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364861
            Assembly: GCF_056859795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter portucalensis
  ORGANISM  Citrobacter portucalensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5125300)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5125300)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRB000000000.1.
            The Citrobacter portucalensis whole genome shotgun (WGS) project
            has the project accession NZ_JBSYRB000000000.  This version of the
            project (01) has the accession number NZ_JBSYRB010000000, and
            consists of sequences JBSYRB010000001-JBSYRB010000154.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 55x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859795.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:52:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,027
            CDSs (total)                      :: 4,936
            Genes (coding)                    :: 4,837
            CDSs (with protein)               :: 4,837
            Genes (RNA)                       :: 91
            rRNAs                             :: 3, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2, 1, 5 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 99
            CDSs (without protein)            :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 25 of 99
            Pseudo Genes (incomplete)         :: 79 of 99
            Pseudo Genes (internal stop)      :: 10 of 99
            Pseudo Genes (multiple problems)  :: 13 of 99
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5125300
                     /organism="Citrobacter portucalensis"
                     /mol_type="genomic DNA"
                     /strain="2SOA14mer"
                     /isolation_source="mWWTP outflow"
                     /db_xref="taxon:1639133"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRB010000001-JBSYRB010000154
WGS_SCAFLD  NZ_JBSYRB010000001-NZ_JBSYRB010000154
//
LOCUS       NZ_JBWVBL010000000   5306904 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas caviae strain K1073, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWVBL000000000
VERSION     NZ_JBWVBL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56817191
            Assembly: GCF_056863445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas caviae
  ORGANISM  Aeromonas caviae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 5306904)
  AUTHORS   Luo,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-APR-2026) Department of Clinical Laboratory, Taizhou
            Municipal Hospital, No. 381-1, Zhongshan East Road, Jiaojiang,
            Taizhou, Zhejiang 318000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWVBL000000000.1.
            The Aeromonas caviae whole genome shotgun (WGS) project has the
            project accession NZ_JBWVBL000000000.  This version of the project
            (01) has the accession number NZ_JBWVBL010000000, and consists of
            sequences JBWVBL010000001-JBWVBL010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: the Oxford Nanopore Technologies
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863445.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:10:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,057
            CDSs (total)                      :: 4,896
            Genes (coding)                    :: 4,703
            CDSs (with protein)               :: 4,703
            Genes (RNA)                       :: 161
            rRNAs                             :: 11, 10, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 11, 10, 10 (5S, 16S, 23S)
            tRNAs                             :: 123
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 193
            CDSs (without protein)            :: 193
            Pseudo Genes (ambiguous residues) :: 0 of 193
            Pseudo Genes (frameshifted)       :: 72 of 193
            Pseudo Genes (incomplete)         :: 134 of 193
            Pseudo Genes (internal stop)      :: 18 of 193
            Pseudo Genes (multiple problems)  :: 25 of 193
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5306904
                     /organism="Aeromonas caviae"
                     /mol_type="genomic DNA"
                     /strain="K1073"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:648"
                     /geo_loc_name="China: Anhui"
                     /lat_lon="31 N 116 E"
                     /collection_date="2022"
                     /collected_by="Xinhua Luo"
WGS         JBWVBL010000001-JBWVBL010000003
WGS_SCAFLD  NZ_CM166506
WGS_SCAFLD  NZ_JBWVBL010000002-NZ_JBWVBL010000003
//
LOCUS       NZ_JBSYSR010000000   5790247 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SHA7cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSR000000000
VERSION     NZ_JBSYSR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364819
            Assembly: GCF_056860675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5790247)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5790247)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSR000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSR000000000.  This version of the project
            (01) has the accession number NZ_JBSYSR010000000, and consists of
            sequences JBSYSR010000001-JBSYSR010000210.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 42x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860675.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:55:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,764
            CDSs (total)                      :: 5,669
            Genes (coding)                    :: 5,471
            CDSs (with protein)               :: 5,471
            Genes (RNA)                       :: 95
            rRNAs                             :: 2, 3, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 8 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 35 of 198
            Pseudo Genes (incomplete)         :: 164 of 198
            Pseudo Genes (internal stop)      :: 18 of 198
            Pseudo Genes (multiple problems)  :: 18 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5790247
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SHA7cef"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSR010000001-JBSYSR010000210
WGS_SCAFLD  NZ_JBSYSR010000001-NZ_JBSYSR010000210
//
LOCUS       NZ_JBSYSH010000000   5413066 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SHcef3merA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSH000000000
VERSION     NZ_JBSYSH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364829
            Assembly: GCF_056860455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5413066)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5413066)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSH000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSH000000000.  This version of the project
            (01) has the accession number NZ_JBSYSH010000000, and consists of
            sequences JBSYSH010000001-JBSYSH010000138.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 36x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860455.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:51:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,357
            CDSs (total)                      :: 5,270
            Genes (coding)                    :: 5,147
            CDSs (with protein)               :: 5,147
            Genes (RNA)                       :: 87
            rRNAs                             :: 2, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 26 of 123
            Pseudo Genes (incomplete)         :: 88 of 123
            Pseudo Genes (internal stop)      :: 19 of 123
            Pseudo Genes (multiple problems)  :: 10 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5413066
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SHcef3merA"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSH010000001-JBSYSH010000138
WGS_SCAFLD  NZ_JBSYSH010000001-NZ_JBSYSH010000138
//
LOCUS       NZ_JBXFWZ010000000   3216531 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brevundimonas aurantiaca strain H12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXFWZ000000000
VERSION     NZ_JBXFWZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN57193755
            Assembly: GCF_056856855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brevundimonas aurantiaca
  ORGANISM  Brevundimonas aurantiaca
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Caulobacterales; Caulobacteraceae; Brevundimonas.
REFERENCE   1  (bases 1 to 3216531)
  AUTHORS   Wu,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2026) College of Life Science, Hebei University,
            No. 180 Wusi East Road, Baoding, Hebei 071002, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFWZ000000000.1.
            The Brevundimonas aurantiaca whole genome shotgun (WGS) project has
            the project accession NZ_JBXFWZ000000000.  This version of the
            project (01) has the accession number NZ_JBXFWZ010000000, and
            consists of sequence JBXFWZ010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: unicycle v. v0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856855.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:11:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,178
            CDSs (total)                      :: 3,118
            Genes (coding)                    :: 3,102
            CDSs (with protein)               :: 3,102
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 5 of 16
            Pseudo Genes (incomplete)         :: 12 of 16
            Pseudo Genes (internal stop)      :: 2 of 16
            Pseudo Genes (multiple problems)  :: 3 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3216531
                     /organism="Brevundimonas aurantiaca"
                     /mol_type="genomic DNA"
                     /strain="H12"
                     /isolation_source="Flaveria bidentis"
                     /db_xref="taxon:74316"
                     /geo_loc_name="China: Baoding"
                     /collection_date="2024-10-28"
WGS         JBXFWZ010000001
WGS_SCAFLD  NZ_CM166468
//
LOCUS       NZ_JBSYSD010000000   5108874 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SHcef8merB, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSD000000000
VERSION     NZ_JBSYSD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364833
            Assembly: GCF_056860355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5108874)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5108874)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSD000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSD000000000.  This version of the project
            (01) has the accession number NZ_JBSYSD010000000, and consists of
            sequences JBSYSD010000001-JBSYSD010000091.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 23x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860355.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:47:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,978
            CDSs (total)                      :: 4,886
            Genes (coding)                    :: 4,785
            CDSs (with protein)               :: 4,785
            Genes (RNA)                       :: 92
            rRNAs                             :: 2, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 101
            CDSs (without protein)            :: 101
            Pseudo Genes (ambiguous residues) :: 0 of 101
            Pseudo Genes (frameshifted)       :: 32 of 101
            Pseudo Genes (incomplete)         :: 73 of 101
            Pseudo Genes (internal stop)      :: 21 of 101
            Pseudo Genes (multiple problems)  :: 20 of 101
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5108874
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SHcef8merB"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSD010000001-JBSYSD010000091
WGS_SCAFLD  NZ_JBSYSD010000001-NZ_JBSYSD010000091
//
LOCUS       NZ_JBSYRS010000000   4879599 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter braakii strain 2SIA3mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRS000000000
VERSION     NZ_JBSYRS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364844
            Assembly: GCF_056860155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter braakii
  ORGANISM  Citrobacter braakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 4879599)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4879599)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRS000000000.1.
            The Citrobacter braakii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYRS000000000.  This version of the project
            (01) has the accession number NZ_JBSYRS010000000, and consists of
            sequences JBSYRS010000001-JBSYRS010000057.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 20x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860155.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:33:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,688
            CDSs (total)                      :: 4,593
            Genes (coding)                    :: 4,523
            CDSs (with protein)               :: 4,523
            Genes (RNA)                       :: 95
            rRNAs                             :: 3, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 4, 3 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 20 of 70
            Pseudo Genes (incomplete)         :: 51 of 70
            Pseudo Genes (internal stop)      :: 12 of 70
            Pseudo Genes (multiple problems)  :: 10 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4879599
                     /organism="Citrobacter braakii"
                     /mol_type="genomic DNA"
                     /strain="2SIA3mer"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:57706"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRS010000001-JBSYRS010000057
WGS_SCAFLD  NZ_JBSYRS010000001-NZ_JBSYRS010000057
//
LOCUS       NZ_JBSYSE010000000   5406840 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SHcef7merA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSE000000000
VERSION     NZ_JBSYSE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364832
            Assembly: GCF_056860395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5406840)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5406840)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSE000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSE000000000.  This version of the project
            (01) has the accession number NZ_JBSYSE010000000, and consists of
            sequences JBSYSE010000001-JBSYSE010000160.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 31x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860395.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:50:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,321
            CDSs (total)                      :: 5,235
            Genes (coding)                    :: 5,085
            CDSs (with protein)               :: 5,085
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 150
            CDSs (without protein)            :: 150
            Pseudo Genes (ambiguous residues) :: 0 of 150
            Pseudo Genes (frameshifted)       :: 34 of 150
            Pseudo Genes (incomplete)         :: 111 of 150
            Pseudo Genes (internal stop)      :: 23 of 150
            Pseudo Genes (multiple problems)  :: 16 of 150
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5406840
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SHcef7merA"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSE010000001-JBSYSE010000160
WGS_SCAFLD  NZ_JBSYSE010000001-NZ_JBSYSE010000160
//
LOCUS       NZ_JBSYSY010000000   5486958 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter portucalensis strain 2SHA13mercef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSY000000000
VERSION     NZ_JBSYSY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364812
            Assembly: GCF_056860815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter portucalensis
  ORGANISM  Citrobacter portucalensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5486958)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5486958)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSY000000000.1.
            The Citrobacter portucalensis whole genome shotgun (WGS) project
            has the project accession NZ_JBSYSY000000000.  This version of the
            project (01) has the accession number NZ_JBSYSY010000000, and
            consists of sequences JBSYSY010000001-JBSYSY010000171.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 19x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860815.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:04:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,548
            CDSs (total)                      :: 5,465
            Genes (coding)                    :: 5,290
            CDSs (with protein)               :: 5,290
            Genes (RNA)                       :: 83
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 71
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 175
            CDSs (without protein)            :: 175
            Pseudo Genes (ambiguous residues) :: 0 of 175
            Pseudo Genes (frameshifted)       :: 41 of 175
            Pseudo Genes (incomplete)         :: 131 of 175
            Pseudo Genes (internal stop)      :: 22 of 175
            Pseudo Genes (multiple problems)  :: 15 of 175
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5486958
                     /organism="Citrobacter portucalensis"
                     /mol_type="genomic DNA"
                     /strain="2SHA13mercef"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:1639133"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSY010000001-JBSYSY010000171
WGS_SCAFLD  NZ_JBSYSY010000001-NZ_JBSYSY010000171
//
LOCUS       NZ_JBSYSV010000000   5619858 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SHA2cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSV000000000
VERSION     NZ_JBSYSV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364815
            Assembly: GCF_056860715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5619858)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5619858)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSV000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSV000000000.  This version of the project
            (01) has the accession number NZ_JBSYSV010000000, and consists of
            sequences JBSYSV010000001-JBSYSV010000112.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 39x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860715.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:48:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,575
            CDSs (total)                      :: 5,484
            Genes (coding)                    :: 5,366
            CDSs (with protein)               :: 5,366
            Genes (RNA)                       :: 91
            rRNAs                             :: 3, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 28 of 118
            Pseudo Genes (incomplete)         :: 90 of 118
            Pseudo Genes (internal stop)      :: 15 of 118
            Pseudo Genes (multiple problems)  :: 14 of 118
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5619858
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SHA2cef"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSV010000001-JBSYSV010000112
WGS_SCAFLD  NZ_JBSYSV010000001-NZ_JBSYSV010000112
//
LOCUS       NZ_JBSYRU010000000   4946375 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SIA2mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRU000000000
VERSION     NZ_JBSYRU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364842
            Assembly: GCF_056860195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 4946375)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4946375)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRU000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYRU000000000.  This version of the project
            (01) has the accession number NZ_JBSYRU010000000, and consists of
            sequences JBSYRU010000001-JBSYRU010000134.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 39x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860195.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:51:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,831
            CDSs (total)                      :: 4,744
            Genes (coding)                    :: 4,645
            CDSs (with protein)               :: 4,645
            Genes (RNA)                       :: 87
            rRNAs                             :: 3, 4, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 4, 3 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 99
            CDSs (without protein)            :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 28 of 99
            Pseudo Genes (incomplete)         :: 68 of 99
            Pseudo Genes (internal stop)      :: 15 of 99
            Pseudo Genes (multiple problems)  :: 11 of 99
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4946375
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SIA2mer"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRU010000001-JBSYRU010000134
WGS_SCAFLD  NZ_JBSYRU010000001-NZ_JBSYRU010000134
//
LOCUS       NZ_JBSYSK010000000   5394772 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SHcef10merA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSK000000000
VERSION     NZ_JBSYSK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364826
            Assembly: GCF_056860495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5394772)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5394772)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSK000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSK000000000.  This version of the project
            (01) has the accession number NZ_JBSYSK010000000, and consists of
            sequences JBSYSK010000001-JBSYSK010000143.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 13x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860495.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:55:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,356
            CDSs (total)                      :: 5,266
            Genes (coding)                    :: 5,139
            CDSs (with protein)               :: 5,139
            Genes (RNA)                       :: 90
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 127
            CDSs (without protein)            :: 127
            Pseudo Genes (ambiguous residues) :: 0 of 127
            Pseudo Genes (frameshifted)       :: 26 of 127
            Pseudo Genes (incomplete)         :: 93 of 127
            Pseudo Genes (internal stop)      :: 19 of 127
            Pseudo Genes (multiple problems)  :: 11 of 127
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5394772
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SHcef10merA"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSK010000001-JBSYSK010000143
WGS_SCAFLD  NZ_JBSYSK010000001-NZ_JBSYSK010000143
//
LOCUS       NZ_JBXFYN010000000   8476800 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia contaminans strain COLMIS 204, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXFYN000000000
VERSION     NZ_JBXFYN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56786085
            Assembly: GCF_056858375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia contaminans
  ORGANISM  Burkholderia contaminans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 8476800)
  AUTHORS   Escobar,M.C., Nino-Garcia,J.P., Acosta-Gonzalez,A.,
            Diaz-Cardenas,C., Vasquez,Y., Marques,S. and Cardona,G.
  TITLE     Genome-Based Insights into Metal Co-Resistance in Amazonian
            Mercury-Resistant Bacteria: Ecological Lifestyle and Biosafety
            Implications for Bioremediation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8476800)
  AUTHORS   Escobar,M.C., Nino-Garcia,J.P., Acosta-Gonzalez,A.,
            Diaz-Cardenas,C., Vasquez,Y., Marques,S. and Cardona,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAR-2026) Biotechnology and Genetic Resources
            Laboratory, Sinchi Amazonic Institute of Scientific Research, Cl.
            20 #5-44, Bogota, Cundinamarca 111321, Colombia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFYN000000000.1.
            The Burkholderia contaminans whole genome shotgun (WGS) project has
            the project accession NZ_JBXFYN000000000.  This version of the
            project (01) has the accession number NZ_JBXFYN010000000, and
            consists of sequences JBXFYN010000001-JBXFYN010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 31-JAN-2023
            Assembly Method        :: Flye v. 2.9.1-b1780
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 475x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858375.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:42:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,807
            CDSs (total)                      :: 7,717
            Genes (coding)                    :: 7,574
            CDSs (with protein)               :: 7,574
            Genes (RNA)                       :: 90
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 143
            CDSs (without protein)            :: 143
            Pseudo Genes (ambiguous residues) :: 0 of 143
            Pseudo Genes (frameshifted)       :: 64 of 143
            Pseudo Genes (incomplete)         :: 93 of 143
            Pseudo Genes (internal stop)      :: 22 of 143
            Pseudo Genes (multiple problems)  :: 32 of 143
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8476800
                     /organism="Burkholderia contaminans"
                     /mol_type="genomic DNA"
                     /strain="COLMIS 204"
                     /isolation_source="sediment"
                     /db_xref="taxon:488447"
                     /geo_loc_name="Colombia: Taraira"
                     /collection_date="2016-06-27"
WGS         JBXFYN010000001-JBXFYN010000004
WGS_SCAFLD  NZ_JBXFYN010000001-NZ_JBXFYN010000004
//
LOCUS       NZ_JBSYQU010000000   5039380 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SOB2mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYQU000000000
VERSION     NZ_JBSYQU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364868
            Assembly: GCF_056859705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5039380)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5039380)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYQU000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYQU000000000.  This version of the project
            (01) has the accession number NZ_JBSYQU010000000, and consists of
            sequences JBSYQU010000001-JBSYQU010000055.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 45x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859705.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:39:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,857
            CDSs (total)                      :: 4,762
            Genes (coding)                    :: 4,681
            CDSs (with protein)               :: 4,681
            Genes (RNA)                       :: 95
            rRNAs                             :: 3, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 29 of 81
            Pseudo Genes (incomplete)         :: 53 of 81
            Pseudo Genes (internal stop)      :: 15 of 81
            Pseudo Genes (multiple problems)  :: 15 of 81
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5039380
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SOB2mer"
                     /isolation_source="mWWTP outflow"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYQU010000001-JBSYQU010000055
WGS_SCAFLD  NZ_JBSYQU010000001-NZ_JBSYQU010000055
//
LOCUS       NZ_JBSYRC010000000   5374030 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SOA12merB, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRC000000000
VERSION     NZ_JBSYRC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364860
            Assembly: GCF_056859835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5374030)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5374030)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRC000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYRC000000000.  This version of the project
            (01) has the accession number NZ_JBSYRC010000000, and consists of
            sequences JBSYRC010000001-JBSYRC010000101.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 29x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859835.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:53:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,222
            CDSs (total)                      :: 5,120
            Genes (coding)                    :: 4,978
            CDSs (with protein)               :: 4,978
            Genes (RNA)                       :: 102
            rRNAs                             :: 2, 6, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 6, 5 (16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 142
            CDSs (without protein)            :: 142
            Pseudo Genes (ambiguous residues) :: 0 of 142
            Pseudo Genes (frameshifted)       :: 43 of 142
            Pseudo Genes (incomplete)         :: 101 of 142
            Pseudo Genes (internal stop)      :: 30 of 142
            Pseudo Genes (multiple problems)  :: 27 of 142
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5374030
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SOA12merB"
                     /isolation_source="mWWTP outflow"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRC010000001-JBSYRC010000101
WGS_SCAFLD  NZ_JBSYRC010000001-NZ_JBSYRC010000101
//
LOCUS       NZ_JBSYRM010000000   5129440 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SIB1cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRM000000000
VERSION     NZ_JBSYRM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364850
            Assembly: GCF_056860035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5129440)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5129440)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRM000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYRM000000000.  This version of the project
            (01) has the accession number NZ_JBSYRM010000000, and consists of
            sequences JBSYRM010000001-JBSYRM010000128.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 43x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860035.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:39:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,058
            CDSs (total)                      :: 4,968
            Genes (coding)                    :: 4,832
            CDSs (with protein)               :: 4,832
            Genes (RNA)                       :: 90
            rRNAs                             :: 2, 5, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 5, 3 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 136
            CDSs (without protein)            :: 136
            Pseudo Genes (ambiguous residues) :: 0 of 136
            Pseudo Genes (frameshifted)       :: 33 of 136
            Pseudo Genes (incomplete)         :: 101 of 136
            Pseudo Genes (internal stop)      :: 19 of 136
            Pseudo Genes (multiple problems)  :: 15 of 136
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5129440
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SIB1cef"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRM010000001-JBSYRM010000128
WGS_SCAFLD  NZ_JBSYRM010000001-NZ_JBSYRM010000128
//
LOCUS       NZ_JBSYSM010000000   5295914 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SHB1mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSM000000000
VERSION     NZ_JBSYSM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364824
            Assembly: GCF_056860575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5295914)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5295914)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSM000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSM000000000.  This version of the project
            (01) has the accession number NZ_JBSYSM010000000, and consists of
            sequences JBSYSM010000001-JBSYSM010000102.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 44x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860575.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:44:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,254
            CDSs (total)                      :: 5,163
            Genes (coding)                    :: 5,029
            CDSs (with protein)               :: 5,029
            Genes (RNA)                       :: 91
            rRNAs                             :: 2, 6, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 6, 3 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 134
            CDSs (without protein)            :: 134
            Pseudo Genes (ambiguous residues) :: 0 of 134
            Pseudo Genes (frameshifted)       :: 35 of 134
            Pseudo Genes (incomplete)         :: 102 of 134
            Pseudo Genes (internal stop)      :: 17 of 134
            Pseudo Genes (multiple problems)  :: 18 of 134
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5295914
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SHB1mer"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSM010000001-JBSYSM010000102
WGS_SCAFLD  NZ_JBSYSM010000001-NZ_JBSYSM010000102
//
LOCUS       NZ_JBSYRF010000000   5094803 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SIB8mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRF000000000
VERSION     NZ_JBSYRF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364857
            Assembly: GCF_056859895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5094803)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5094803)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRF000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYRF000000000.  This version of the project
            (01) has the accession number NZ_JBSYRF010000000, and consists of
            sequences JBSYRF010000001-JBSYRF010000060.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 46x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859895.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:49:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,906
            CDSs (total)                      :: 4,818
            Genes (coding)                    :: 4,751
            CDSs (with protein)               :: 4,751
            Genes (RNA)                       :: 88
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 4, 2 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 27 of 67
            Pseudo Genes (incomplete)         :: 42 of 67
            Pseudo Genes (internal stop)      :: 13 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5094803
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SIB8mer"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRF010000001-JBSYRF010000060
WGS_SCAFLD  NZ_JBSYRF010000001-NZ_JBSYRF010000060
//
LOCUS       NZ_JBSYSB010000000   5630801 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SHcefen6merA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSB000000000
VERSION     NZ_JBSYSB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364835
            Assembly: GCF_056860335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5630801)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5630801)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSB000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSB000000000.  This version of the project
            (01) has the accession number NZ_JBSYSB010000000, and consists of
            sequences JBSYSB010000001-JBSYSB010000212.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 32x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860335.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:52:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,759
            CDSs (total)                      :: 5,663
            Genes (coding)                    :: 5,474
            CDSs (with protein)               :: 5,474
            Genes (RNA)                       :: 96
            rRNAs                             :: 3, 3, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3, 6 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 189
            CDSs (without protein)            :: 189
            Pseudo Genes (ambiguous residues) :: 0 of 189
            Pseudo Genes (frameshifted)       :: 44 of 189
            Pseudo Genes (incomplete)         :: 140 of 189
            Pseudo Genes (internal stop)      :: 26 of 189
            Pseudo Genes (multiple problems)  :: 20 of 189
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5630801
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SHcefen6merA"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSB010000001-JBSYSB010000212
WGS_SCAFLD  NZ_JBSYSB010000001-NZ_JBSYSB010000212
//
LOCUS       NZ_JBSYRG010000000   5086779 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SIB7mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRG000000000
VERSION     NZ_JBSYRG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364856
            Assembly: GCF_056859915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5086779)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5086779)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRG000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYRG000000000.  This version of the project
            (01) has the accession number NZ_JBSYRG010000000, and consists of
            sequences JBSYRG010000001-JBSYRG010000072.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 31x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859915.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:42:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,917
            CDSs (total)                      :: 4,826
            Genes (coding)                    :: 4,740
            CDSs (with protein)               :: 4,740
            Genes (RNA)                       :: 91
            rRNAs                             :: 2, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2, 4 (16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 86
            CDSs (without protein)            :: 86
            Pseudo Genes (ambiguous residues) :: 0 of 86
            Pseudo Genes (frameshifted)       :: 28 of 86
            Pseudo Genes (incomplete)         :: 60 of 86
            Pseudo Genes (internal stop)      :: 17 of 86
            Pseudo Genes (multiple problems)  :: 17 of 86
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5086779
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SIB7mer"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRG010000001-JBSYRG010000072
WGS_SCAFLD  NZ_JBSYRG010000001-NZ_JBSYRG010000072
//
LOCUS       NZ_JBSYTB010000000   5422538 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter portucalensis strain 2SHA11cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYTB000000000
VERSION     NZ_JBSYTB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364809
            Assembly: GCF_056860855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter portucalensis
  ORGANISM  Citrobacter portucalensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5422538)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5422538)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYTB000000000.1.
            The Citrobacter portucalensis whole genome shotgun (WGS) project
            has the project accession NZ_JBSYTB000000000.  This version of the
            project (01) has the accession number NZ_JBSYTB010000000, and
            consists of sequences JBSYTB010000001-JBSYTB010000148.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 28x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860855.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:58:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,302
            CDSs (total)                      :: 5,211
            Genes (coding)                    :: 5,086
            CDSs (with protein)               :: 5,086
            Genes (RNA)                       :: 91
            rRNAs                             :: 2, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 125
            CDSs (without protein)            :: 125
            Pseudo Genes (ambiguous residues) :: 0 of 125
            Pseudo Genes (frameshifted)       :: 28 of 125
            Pseudo Genes (incomplete)         :: 98 of 125
            Pseudo Genes (internal stop)      :: 18 of 125
            Pseudo Genes (multiple problems)  :: 18 of 125
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5422538
                     /organism="Citrobacter portucalensis"
                     /mol_type="genomic DNA"
                     /strain="2SHA11cef"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:1639133"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYTB010000001-JBSYTB010000148
WGS_SCAFLD  NZ_JBSYTB010000001-NZ_JBSYTB010000148
//
LOCUS       NZ_JBXEQW010000000   4286715 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus subtilis strain B171, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXEQW000000000
VERSION     NZ_JBXEQW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56360655
            Assembly: GCF_056858235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus subtilis
  ORGANISM  Bacillus subtilis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus.
REFERENCE   1  (bases 1 to 4286715)
  AUTHORS   Cairns,E.C.O.P. and Zytynska,S.E.
  TITLE     Revealing Functional Traits of Insect Pest Suppressive
            Rhizobacterial Strains through Comparative Genomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4286715)
  AUTHORS   Cairns,E.C.O.P. and Zytynska,S.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAR-2026) Department of Evolution, Ecology and
            Behaviour, University of Liverpool, Crown Street, Liverpool L69
            7ZX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEQW000000000.1.
            The Bacillus subtilis whole genome shotgun (WGS) project has the
            project accession NZ_JBXEQW000000000.  This version of the project
            (01) has the accession number NZ_JBXEQW010000000, and consists of
            sequence JBXEQW010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Hybrid Oxford Nanopore GridION and
                                      Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858235.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:27:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,527
            CDSs (total)                      :: 4,406
            Genes (coding)                    :: 4,336
            CDSs (with protein)               :: 4,336
            Genes (RNA)                       :: 121
            rRNAs                             :: 10, 10, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 10, 10, 10 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 38 of 70
            Pseudo Genes (internal stop)      :: 8 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4286715
                     /organism="Bacillus subtilis"
                     /mol_type="genomic DNA"
                     /strain="B171"
                     /isolation_source="ENVO:00002259"
                     /host="Hordeum vulgare"
                     /db_xref="taxon:1423"
                     /geo_loc_name="Germany: Scheyern"
                     /lat_lon="48.29 N 11.26 E"
                     /collection_date="2004-04-15"
WGS         JBXEQW010000001
WGS_SCAFLD  NZ_CM166492
//
LOCUS       NZ_JBSYTM010000000   5403343 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2RDA10mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYTM000000000
VERSION     NZ_JBSYTM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364798
            Assembly: GCF_056861075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5403343)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5403343)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYTM000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYTM000000000.  This version of the project
            (01) has the accession number NZ_JBSYTM010000000, and consists of
            sequences JBSYTM010000001-JBSYTM010000345.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 49x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861075.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:02:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,470
            CDSs (total)                      :: 5,375
            Genes (coding)                    :: 5,146
            CDSs (with protein)               :: 5,146
            Genes (RNA)                       :: 95
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 229
            CDSs (without protein)            :: 229
            Pseudo Genes (ambiguous residues) :: 0 of 229
            Pseudo Genes (frameshifted)       :: 35 of 229
            Pseudo Genes (incomplete)         :: 186 of 229
            Pseudo Genes (internal stop)      :: 28 of 229
            Pseudo Genes (multiple problems)  :: 18 of 229
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5403343
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2RDA10mer"
                     /isolation_source="river downstream"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYTM010000001-JBSYTM010000345
WGS_SCAFLD  NZ_JBSYTM010000001-NZ_JBSYTM010000345
//
LOCUS       NZ_JBSYRK010000000   5455424 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SIB3cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRK000000000
VERSION     NZ_JBSYRK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364852
            Assembly: GCF_056859995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5455424)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5455424)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRK000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYRK000000000.  This version of the project
            (01) has the accession number NZ_JBSYRK010000000, and consists of
            sequences JBSYRK010000001-JBSYRK010000083.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 53x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859995.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:47:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,372
            CDSs (total)                      :: 5,279
            Genes (coding)                    :: 5,165
            CDSs (with protein)               :: 5,165
            Genes (RNA)                       :: 93
            rRNAs                             :: 1, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 4 (16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 114
            CDSs (without protein)            :: 114
            Pseudo Genes (ambiguous residues) :: 0 of 114
            Pseudo Genes (frameshifted)       :: 45 of 114
            Pseudo Genes (incomplete)         :: 72 of 114
            Pseudo Genes (internal stop)      :: 23 of 114
            Pseudo Genes (multiple problems)  :: 22 of 114
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5455424
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SIB3cef"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRK010000001-JBSYRK010000083
WGS_SCAFLD  NZ_JBSYRK010000001-NZ_JBSYRK010000083
//
LOCUS       NZ_JBSYTK010000000   5392805 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2RDA1mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYTK000000000
VERSION     NZ_JBSYTK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364800
            Assembly: GCF_056861035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5392805)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5392805)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYTK000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYTK000000000.  This version of the project
            (01) has the accession number NZ_JBSYTK010000000, and consists of
            sequences JBSYTK010000001-JBSYTK010000212.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 46x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861035.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:07:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,327
            CDSs (total)                      :: 5,238
            Genes (coding)                    :: 5,068
            CDSs (with protein)               :: 5,068
            Genes (RNA)                       :: 89
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 170
            CDSs (without protein)            :: 170
            Pseudo Genes (ambiguous residues) :: 0 of 170
            Pseudo Genes (frameshifted)       :: 42 of 170
            Pseudo Genes (incomplete)         :: 128 of 170
            Pseudo Genes (internal stop)      :: 24 of 170
            Pseudo Genes (multiple problems)  :: 20 of 170
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5392805
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2RDA1mer"
                     /isolation_source="river downstream"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYTK010000001-JBSYTK010000212
WGS_SCAFLD  NZ_JBSYTK010000001-NZ_JBSYTK010000212
//
LOCUS       NZ_JBSYTG010000000   5767162 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2RUA1merA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYTG000000000
VERSION     NZ_JBSYTG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364804
            Assembly: GCF_056860975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5767162)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5767162)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYTG000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYTG000000000.  This version of the project
            (01) has the accession number NZ_JBSYTG010000000, and consists of
            sequences JBSYTG010000001-JBSYTG010000241.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 23x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860975.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:48:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,825
            CDSs (total)                      :: 5,736
            Genes (coding)                    :: 5,565
            CDSs (with protein)               :: 5,565
            Genes (RNA)                       :: 89
            rRNAs                             :: 2, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 4, 5 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 171
            CDSs (without protein)            :: 171
            Pseudo Genes (ambiguous residues) :: 0 of 171
            Pseudo Genes (frameshifted)       :: 28 of 171
            Pseudo Genes (incomplete)         :: 140 of 171
            Pseudo Genes (internal stop)      :: 23 of 171
            Pseudo Genes (multiple problems)  :: 18 of 171
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5767162
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2RUA1merA"
                     /isolation_source="river upstream"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYTG010000001-JBSYTG010000241
WGS_SCAFLD  NZ_JBSYTG010000001-NZ_JBSYTG010000241
//
LOCUS       NZ_JBSYRE010000000   5051667 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter portucalensis strain 2SIBk14merB, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRE000000000
VERSION     NZ_JBSYRE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364858
            Assembly: GCF_056859855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter portucalensis
  ORGANISM  Citrobacter portucalensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5051667)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5051667)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRE000000000.1.
            The Citrobacter portucalensis whole genome shotgun (WGS) project
            has the project accession NZ_JBSYRE000000000.  This version of the
            project (01) has the accession number NZ_JBSYRE010000000, and
            consists of sequences JBSYRE010000001-JBSYRE010000098.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 51x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859855.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:42:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,892
            CDSs (total)                      :: 4,797
            Genes (coding)                    :: 4,692
            CDSs (with protein)               :: 4,692
            Genes (RNA)                       :: 95
            rRNAs                             :: 3, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 25 of 105
            Pseudo Genes (incomplete)         :: 77 of 105
            Pseudo Genes (internal stop)      :: 17 of 105
            Pseudo Genes (multiple problems)  :: 14 of 105
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5051667
                     /organism="Citrobacter portucalensis"
                     /mol_type="genomic DNA"
                     /strain="2SIBk14merB"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:1639133"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRE010000001-JBSYRE010000098
WGS_SCAFLD  NZ_JBSYRE010000001-NZ_JBSYRE010000098
//
LOCUS       NZ_JBSYRQ010000000   5065627 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SIA4mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRQ000000000
VERSION     NZ_JBSYRQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364846
            Assembly: GCF_056860115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5065627)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5065627)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRQ000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYRQ000000000.  This version of the project
            (01) has the accession number NZ_JBSYRQ010000000, and consists of
            sequences JBSYRQ010000001-JBSYRQ010000049.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 42x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860115.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:37:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,883
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,706
            CDSs (with protein)               :: 4,706
            Genes (RNA)                       :: 89
            rRNAs                             :: 2, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 88
            CDSs (without protein)            :: 88
            Pseudo Genes (ambiguous residues) :: 0 of 88
            Pseudo Genes (frameshifted)       :: 30 of 88
            Pseudo Genes (incomplete)         :: 55 of 88
            Pseudo Genes (internal stop)      :: 15 of 88
            Pseudo Genes (multiple problems)  :: 12 of 88
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5065627
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SIA4mer"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRQ010000001-JBSYRQ010000049
WGS_SCAFLD  NZ_JBSYRQ010000001-NZ_JBSYRQ010000049
//
LOCUS       NZ_JBXEQE010000000   7200706 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Agaribacillus sp. DX54, whole genome shotgun sequencing project.
ACCESSION   NZ_JBXEQE000000000
VERSION     NZ_JBXEQE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56644576
            Assembly: GCF_056858335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agaribacillus sp. DX54
  ORGANISM  Agaribacillus sp. DX54
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Splendidivirgaceae; Agaribacillus.
REFERENCE   1  (bases 1 to 7200706)
  AUTHORS   Yoon,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2026) College of Pharmacy, Keimyung University,
            1095 Dalgubeoldaero, Dalseo-gu, Daegu si 42601, South Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEQE000000000.1.
            The Agaribacillus sp. DX54 whole genome shotgun (WGS) project has
            the project accession NZ_JBXEQE000000000.  This version of the
            project (01) has the accession number NZ_JBXEQE010000000, and
            consists of sequences JBXEQE010000001-JBXEQE010000186.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 525.9x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858335.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:27:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,182
            CDSs (total)                      :: 6,138
            Genes (coding)                    :: 6,070
            CDSs (with protein)               :: 6,070
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 7 of 68
            Pseudo Genes (incomplete)         :: 56 of 68
            Pseudo Genes (internal stop)      :: 11 of 68
            Pseudo Genes (multiple problems)  :: 6 of 68
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7200706
                     /organism="Agaribacillus sp. DX54"
                     /mol_type="genomic DNA"
                     /strain="DX54"
                     /isolation_source="Coral"
                     /db_xref="taxon:3696550"
                     /geo_loc_name="Japan: Okinawa"
                     /collection_date="2004-03"
WGS         JBXEQE010000001-JBXEQE010000186
WGS_SCAFLD  NZ_JBXEQE010000001-NZ_JBXEQE010000186
//
LOCUS       NZ_JBSYRO010000000   5305800 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter europaeus strain 2SIA5mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRO000000000
VERSION     NZ_JBSYRO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364848
            Assembly: GCF_056860055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter europaeus
  ORGANISM  Citrobacter europaeus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter.
REFERENCE   1  (bases 1 to 5305800)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5305800)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRO000000000.1.
            The Citrobacter europaeus whole genome shotgun (WGS) project has
            the project accession NZ_JBSYRO000000000.  This version of the
            project (01) has the accession number NZ_JBSYRO010000000, and
            consists of sequences JBSYRO010000001-JBSYRO010000075.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 18x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860055.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:42:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,062
            CDSs (total)                      :: 4,966
            Genes (coding)                    :: 4,898
            CDSs (with protein)               :: 4,898
            Genes (RNA)                       :: 96
            rRNAs                             :: 3, 5, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 5, 6 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 20 of 68
            Pseudo Genes (incomplete)         :: 48 of 68
            Pseudo Genes (internal stop)      :: 14 of 68
            Pseudo Genes (multiple problems)  :: 12 of 68
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5305800
                     /organism="Citrobacter europaeus"
                     /mol_type="genomic DNA"
                     /strain="2SIA5mer"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:1914243"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRO010000001-JBSYRO010000075
WGS_SCAFLD  NZ_JBSYRO010000001-NZ_JBSYRO010000075
//
LOCUS       NZ_JBXFWV010000000   6225759 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus basilensis strain MS11, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXFWV000000000
VERSION     NZ_JBXFWV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN57193759
            Assembly: GCF_056856795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus basilensis
  ORGANISM  Bacillus basilensis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 6225759)
  AUTHORS   Wu,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2026) College of Life Science, Hebei University,
            No. 180 Wusi East Road, Baoding, Hebei 071002, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFWV000000000.1.
            The Bacillus basilensis whole genome shotgun (WGS) project has the
            project accession NZ_JBXFWV000000000.  This version of the project
            (01) has the accession number NZ_JBXFWV010000000, and consists of
            sequences JBXFWV010000001-JBXFWV010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: canu v. v2.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856795.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:44:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,408
            CDSs (total)                      :: 6,253
            Genes (coding)                    :: 5,991
            CDSs (with protein)               :: 5,991
            Genes (RNA)                       :: 155
            rRNAs                             :: 14, 14, 14 (5S, 16S, 23S)
            complete rRNAs                    :: 14, 14, 14 (5S, 16S, 23S)
            tRNAs                             :: 108
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 262
            CDSs (without protein)            :: 262
            Pseudo Genes (ambiguous residues) :: 0 of 262
            Pseudo Genes (frameshifted)       :: 105 of 262
            Pseudo Genes (incomplete)         :: 160 of 262
            Pseudo Genes (internal stop)      :: 64 of 262
            Pseudo Genes (multiple problems)  :: 56 of 262
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6225759
                     /organism="Bacillus basilensis"
                     /mol_type="genomic DNA"
                     /strain="MS11"
                     /isolation_source="Phytolacca americana"
                     /db_xref="taxon:3243721"
                     /geo_loc_name="China: Baoding"
                     /collection_date="2024-11-12"
WGS         JBXFWV010000001-JBXFWV010000004
WGS_SCAFLD  NZ_CM166465
WGS_SCAFLD  NZ_JBXFWV010000002-NZ_JBXFWV010000004
//
LOCUS       NZ_JBXEQU010000000   3915549 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus velezensis strain FZB42, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXEQU000000000
VERSION     NZ_JBXEQU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56360658
            Assembly: GCF_056858195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus velezensis
  ORGANISM  Bacillus velezensis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus amyloliquefaciens group.
REFERENCE   1  (bases 1 to 3915549)
  AUTHORS   Cairns,E.C.O.P. and Zytynska,S.E.
  TITLE     Revealing Functional Traits of Insect Pest Suppressive
            Rhizobacterial Strains through Comparative Genomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3915549)
  AUTHORS   Cairns,E.C.O.P. and Zytynska,S.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAR-2026) Department of Evolution, Ecology and
            Behaviour, University of Liverpool, Crown Street, Liverpool L69
            7ZX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEQU000000000.1.
            The Bacillus velezensis whole genome shotgun (WGS) project has the
            project accession NZ_JBXEQU000000000.  This version of the project
            (01) has the accession number NZ_JBXEQU010000000, and consists of
            sequence JBXEQU010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Hybrid Oxford Nanopore GridION and
                                      Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858195.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:31:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,882
            CDSs (total)                      :: 3,764
            Genes (coding)                    :: 3,683
            CDSs (with protein)               :: 3,683
            Genes (RNA)                       :: 118
            rRNAs                             :: 9, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 35 of 81
            Pseudo Genes (incomplete)         :: 55 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 19 of 81
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3915549
                     /organism="Bacillus velezensis"
                     /mol_type="genomic DNA"
                     /strain="FZB42"
                     /isolation_source="ENVO:00002259"
                     /host="Beta vulgaris"
                     /type_material="type strain of Bacillus amyloliquefaciens
                     subsp. plantarum"
                     /db_xref="taxon:492670"
                     /geo_loc_name="Germany: Gottingen"
                     /lat_lon="51.54 N 9.92 E"
                     /collection_date="1997-11-04"
WGS         JBXEQU010000001
WGS_SCAFLD  NZ_CM166490
//
LOCUS       NZ_JBWVBJ010000000   4753875 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas caviae strain K1065, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWVBJ000000000
VERSION     NZ_JBWVBJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56817027
            Assembly: GCF_056863375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas caviae
  ORGANISM  Aeromonas caviae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4753875)
  AUTHORS   Luo,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-APR-2026) Department of Clinical Laboratory, Taizhou
            Municipal Hospital, No. 381-1, Zhongshan East Road, Jiaojiang,
            Taizhou, Zhejiang 318000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWVBJ000000000.1.
            The Aeromonas caviae whole genome shotgun (WGS) project has the
            project accession NZ_JBWVBJ000000000.  This version of the project
            (01) has the accession number NZ_JBWVBJ010000000, and consists of
            sequences JBWVBJ010000001-JBWVBJ010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: the Oxford Nanopore Technologies
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863375.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 20:05:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,465
            CDSs (total)                      :: 4,307
            Genes (coding)                    :: 4,164
            CDSs (with protein)               :: 4,164
            Genes (RNA)                       :: 158
            rRNAs                             :: 11, 10, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 11, 10, 10 (5S, 16S, 23S)
            tRNAs                             :: 123
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 143
            CDSs (without protein)            :: 143
            Pseudo Genes (ambiguous residues) :: 0 of 143
            Pseudo Genes (frameshifted)       :: 74 of 143
            Pseudo Genes (incomplete)         :: 83 of 143
            Pseudo Genes (internal stop)      :: 27 of 143
            Pseudo Genes (multiple problems)  :: 34 of 143
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4753875
                     /organism="Aeromonas caviae"
                     /mol_type="genomic DNA"
                     /strain="K1065"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:648"
                     /geo_loc_name="China: Anhui"
                     /lat_lon="31 N 116 E"
                     /collection_date="2018"
                     /collected_by="Xinhua Luo"
WGS         JBWVBJ010000001-JBWVBJ010000003
WGS_SCAFLD  NZ_CM166505
WGS_SCAFLD  NZ_JBWVBJ010000002-NZ_JBWVBJ010000003
//
LOCUS       NZ_JBSYRD010000000   5523136 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SOA11merB, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRD000000000
VERSION     NZ_JBSYRD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364859
            Assembly: GCF_056859875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5523136)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5523136)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRD000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYRD000000000.  This version of the project
            (01) has the accession number NZ_JBSYRD010000000, and consists of
            sequences JBSYRD010000001-JBSYRD010000249.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859875.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:41:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,594
            CDSs (total)                      :: 5,507
            Genes (coding)                    :: 5,314
            CDSs (with protein)               :: 5,314
            Genes (RNA)                       :: 87
            rRNAs                             :: 1, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 3 (16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 193
            CDSs (without protein)            :: 193
            Pseudo Genes (ambiguous residues) :: 0 of 193
            Pseudo Genes (frameshifted)       :: 51 of 193
            Pseudo Genes (incomplete)         :: 147 of 193
            Pseudo Genes (internal stop)      :: 19 of 193
            Pseudo Genes (multiple problems)  :: 21 of 193
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5523136
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SOA11merB"
                     /isolation_source="mWWTP outflow"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRD010000001-JBSYRD010000249
WGS_SCAFLD  NZ_JBSYRD010000001-NZ_JBSYRD010000249
//
LOCUS       NZ_JBSYRA010000000   5636583 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 2SOA16merBa, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRA000000000
VERSION     NZ_JBSYRA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364862
            Assembly: GCF_056859815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5636583)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5636583)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRA000000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYRA000000000.  This version of the project
            (01) has the accession number NZ_JBSYRA010000000, and consists of
            sequences JBSYRA010000001-JBSYRA010000129.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 37x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859815.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:48:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,524
            CDSs (total)                      :: 5,427
            Genes (coding)                    :: 5,261
            CDSs (with protein)               :: 5,261
            Genes (RNA)                       :: 97
            rRNAs                             :: 2, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 47 of 166
            Pseudo Genes (incomplete)         :: 122 of 166
            Pseudo Genes (internal stop)      :: 29 of 166
            Pseudo Genes (multiple problems)  :: 28 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5636583
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="2SOA16merBa"
                     /isolation_source="mWWTP outflow"
                     /db_xref="taxon:546"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRA010000001-JBSYRA010000129
WGS_SCAFLD  NZ_JBSYRA010000001-NZ_JBSYRA010000129
//
LOCUS       NZ_JBSYRW010000000   4985652 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter braakii strain 2SIA1mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRW000000000
VERSION     NZ_JBSYRW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364840
            Assembly: GCF_056860275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter braakii
  ORGANISM  Citrobacter braakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 4985652)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4985652)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRW000000000.1.
            The Citrobacter braakii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYRW000000000.  This version of the project
            (01) has the accession number NZ_JBSYRW010000000, and consists of
            sequences JBSYRW010000001-JBSYRW010000056.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 46x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860275.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:40:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,822
            CDSs (total)                      :: 4,731
            Genes (coding)                    :: 4,659
            CDSs (with protein)               :: 4,659
            Genes (RNA)                       :: 91
            rRNAs                             :: 3, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3, 5 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 72
            CDSs (without protein)            :: 72
            Pseudo Genes (ambiguous residues) :: 0 of 72
            Pseudo Genes (frameshifted)       :: 23 of 72
            Pseudo Genes (incomplete)         :: 53 of 72
            Pseudo Genes (internal stop)      :: 14 of 72
            Pseudo Genes (multiple problems)  :: 15 of 72
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4985652
                     /organism="Citrobacter braakii"
                     /mol_type="genomic DNA"
                     /strain="2SIA1mer"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:57706"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRW010000001-JBSYRW010000056
WGS_SCAFLD  NZ_JBSYRW010000001-NZ_JBSYRW010000056
//
LOCUS       NZ_JBSXNY010000000   3990334 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aliiroseovarius sp. B-24, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXNY000000000
VERSION     NZ_JBSXNY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312062
            Assembly: GCF_056857875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aliiroseovarius sp. B-24
  ORGANISM  Aliiroseovarius sp. B-24
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Aliiroseovarius.
REFERENCE   1  (bases 1 to 3990334)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXNY000000000.1.
            The Aliiroseovarius sp. B-24 whole genome shotgun (WGS) project has
            the project accession NZ_JBSXNY000000000.  This version of the
            project (01) has the accession number NZ_JBSXNY010000000, and
            consists of sequences JBSXNY010000001-JBSXNY010000046.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 318.11x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857875.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:07:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,930
            CDSs (total)                      :: 3,877
            Genes (coding)                    :: 3,826
            CDSs (with protein)               :: 3,826
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 43 of 51
            Pseudo Genes (internal stop)      :: 5 of 51
            Pseudo Genes (multiple problems)  :: 10 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3990334
                     /organism="Aliiroseovarius sp. B-24"
                     /mol_type="genomic DNA"
                     /strain="B-24"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472681"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.70368 N 63.83797 E"
                     /collection_date="2022-06"
WGS         JBSXNY010000001-JBSXNY010000046
WGS_SCAFLD  NZ_JBSXNY010000001-NZ_JBSXNY010000046
//
LOCUS       NZ_JBSYSJ010000000   5248018 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter braakii strain 2SHcef1merA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSJ000000000
VERSION     NZ_JBSYSJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364827
            Assembly: GCF_056860515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter braakii
  ORGANISM  Citrobacter braakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5248018)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5248018)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSJ000000000.1.
            The Citrobacter braakii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSJ000000000.  This version of the project
            (01) has the accession number NZ_JBSYSJ010000000, and consists of
            sequences JBSYSJ010000001-JBSYSJ010000193.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 14x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860515.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:46:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,230
            CDSs (total)                      :: 5,142
            Genes (coding)                    :: 4,971
            CDSs (with protein)               :: 4,971
            Genes (RNA)                       :: 88
            rRNAs                             :: 2, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 171
            CDSs (without protein)            :: 171
            Pseudo Genes (ambiguous residues) :: 0 of 171
            Pseudo Genes (frameshifted)       :: 42 of 171
            Pseudo Genes (incomplete)         :: 130 of 171
            Pseudo Genes (internal stop)      :: 27 of 171
            Pseudo Genes (multiple problems)  :: 22 of 171
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5248018
                     /organism="Citrobacter braakii"
                     /mol_type="genomic DNA"
                     /strain="2SHcef1merA"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:57706"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSJ010000001-JBSYSJ010000193
WGS_SCAFLD  NZ_JBSYSJ010000001-NZ_JBSYSJ010000193
//
LOCUS       NZ_JBTNUA010000000   8323591 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Actinoplanes siamensis strain TBRC 4237, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBTNUA000000000
VERSION     NZ_JBTNUA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54551111
            Assembly: GCF_056862845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Actinoplanes siamensis
  ORGANISM  Actinoplanes siamensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Actinoplanes.
REFERENCE   1  (bases 1 to 8323591)
  AUTHORS   Suriyachadkun,C. and Aroonsri,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2026) Biocatalyst Technology Research Team,
            National Center for Genetic Engineering and Biotechnology, 113
            Thailand Science Park, Phahonyothin Road, Khlong Nueng, Khlong
            Luang, Khlong Luang, Pathum Thani 12120, Thailand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTNUA000000000.1.
            The Actinoplanes siamensis whole genome shotgun (WGS) project has
            the project accession NZ_JBTNUA000000000.  This version of the
            project (01) has the accession number NZ_JBTNUA010000000, and
            consists of sequences JBTNUA010000001-JBTNUA010000002.
            Bacteria and source DNA available from Thailand Bioresource
            Research Center.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 21-AUG-2020
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 334.0x
            Sequencing Technology  :: Illumina MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862845.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:53:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,644
            CDSs (total)                      :: 7,550
            Genes (coding)                    :: 7,410
            CDSs (with protein)               :: 7,410
            Genes (RNA)                       :: 94
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 140
            CDSs (without protein)            :: 140
            Pseudo Genes (ambiguous residues) :: 0 of 140
            Pseudo Genes (frameshifted)       :: 51 of 140
            Pseudo Genes (incomplete)         :: 113 of 140
            Pseudo Genes (internal stop)      :: 8 of 140
            Pseudo Genes (multiple problems)  :: 30 of 140
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8323591
                     /organism="Actinoplanes siamensis"
                     /mol_type="genomic DNA"
                     /strain="TBRC 4237"
                     /isolation_source="Bamboo forest"
                     /db_xref="taxon:1223317"
                     /geo_loc_name="Thailand: Khorn Kaen"
                     /lat_lon="16.76 N 101.98 E"
                     /collection_date="2010-09-08"
WGS         JBTNUA010000001-JBTNUA010000002
WGS_SCAFLD  NZ_CM166503
WGS_SCAFLD  NZ_JBTNUA010000002
//
LOCUS       NZ_JBSXNT010000000   3827407 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Alterinioella sp. B-7, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXNT000000000
VERSION     NZ_JBSXNT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312067
            Assembly: GCF_056857775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Alterinioella sp. B-7
  ORGANISM  Alterinioella sp. B-7
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Alterinioella.
REFERENCE   1  (bases 1 to 3827407)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXNT000000000.1.
            The Alterinioella sp. B-7 whole genome shotgun (WGS) project has
            the project accession NZ_JBSXNT000000000.  This version of the
            project (01) has the accession number NZ_JBSXNT010000000, and
            consists of sequences JBSXNT010000001-JBSXNT010000039.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 329.35x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857775.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:14:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,877
            CDSs (total)                      :: 3,829
            Genes (coding)                    :: 3,787
            CDSs (with protein)               :: 3,787
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 9 of 42
            Pseudo Genes (incomplete)         :: 32 of 42
            Pseudo Genes (internal stop)      :: 10 of 42
            Pseudo Genes (multiple problems)  :: 7 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3827407
                     /organism="Alterinioella sp. B-7"
                     /mol_type="genomic DNA"
                     /strain="B-7"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472686"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.70368 N 63.83797 E"
                     /collection_date="2022-06"
WGS         JBSXNT010000001-JBSXNT010000039
WGS_SCAFLD  NZ_JBSXNT010000001-NZ_JBSXNT010000039
//
LOCUS       NZ_JBXEPS010000000   2881238 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Alistipes ihumii strain CCBE759-25, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXEPS000000000
VERSION     NZ_JBXEPS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54870287
            Assembly: GCF_056858655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Alistipes ihumii
  ORGANISM  Alistipes ihumii
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Rikenellaceae; Alistipes.
REFERENCE   1  (bases 1 to 2881238)
  AUTHORS   Gianecini,A., Cipolla,L., Fernandez Caniggia,L. and Prieto,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Bacteriology, National Institute of
            Infectious Diseases, Velez Sarsfield 563, Buenos Aires C1282AFF,
            Argentina
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEPS000000000.1.
            The Alistipes ihumii whole genome shotgun (WGS) project has the
            project accession NZ_JBXEPS000000000.  This version of the project
            (01) has the accession number NZ_JBXEPS010000000, and consists of
            sequence JBXEPS010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 18-DEC-2025
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 384.3x
            Sequencing Technology  :: Illumina MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858655.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:19:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,384
            CDSs (total)                      :: 2,331
            Genes (coding)                    :: 2,304
            CDSs (with protein)               :: 2,304
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 6 of 27
            Pseudo Genes (incomplete)         :: 24 of 27
            Pseudo Genes (internal stop)      :: 3 of 27
            Pseudo Genes (multiple problems)  :: 4 of 27
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2881238
                     /organism="Alistipes ihumii"
                     /mol_type="genomic DNA"
                     /strain="CCBE759-25"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:1470347"
                     /geo_loc_name="Argentina"
                     /lat_lon="34.61315 S 58.37723 W"
                     /collection_date="2025-12-18"
                     /collected_by="National Institute of Infectious Diseases"
WGS         JBXEPS010000001
WGS_SCAFLD  NZ_CM166500
//
LOCUS       NZ_JBXEQX010000000   5542670 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Acidovorax radicis N35, whole genome shotgun sequencing project.
ACCESSION   NZ_JBXEQX000000000
VERSION     NZ_JBXEQX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56360654
            Assembly: GCF_056858255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acidovorax radicis N35
  ORGANISM  Acidovorax radicis N35
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Acidovorax.
REFERENCE   1  (bases 1 to 5542670)
  AUTHORS   Cairns,E.C.O.P. and Zytynska,S.E.
  TITLE     Revealing Functional Traits of Insect Pest Suppressive
            Rhizobacterial Strains through Comparative Genomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5542670)
  AUTHORS   Cairns,E.C.O.P. and Zytynska,S.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAR-2026) Department of Evolution, Ecology and
            Behaviour, University of Liverpool, Crown Street, Liverpool L69
            7ZX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEQX000000000.1.
            The Acidovorax radicis N35 whole genome shotgun (WGS) project has
            the project accession NZ_JBXEQX000000000.  This version of the
            project (01) has the accession number NZ_JBXEQX010000000, and
            consists of sequence JBXEQX010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Hybrid Oxford Nanopore GridION and
                                      Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858255.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:49:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,108
            CDSs (total)                      :: 5,041
            Genes (coding)                    :: 5,020
            CDSs (with protein)               :: 5,020
            Genes (RNA)                       :: 67
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 18 of 21
            Pseudo Genes (internal stop)      :: 2 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5542670
                     /organism="Acidovorax radicis N35"
                     /mol_type="genomic DNA"
                     /strain="N35"
                     /isolation_source="ENVO:00002259"
                     /host="Triticum aestivum"
                     /type_material="type strain of Acidovorax radicis"
                     /db_xref="taxon:999386"
                     /geo_loc_name="Germany: Newmarkt"
                     /lat_lon="49.17 N 11.28 E"
                     /collection_date="2011-11-01"
WGS         JBXEQX010000001
WGS_SCAFLD  NZ_CM166493
//
LOCUS       NZ_JBWVBM010000000   4526259 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas caviae strain K1075, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWVBM000000000
VERSION     NZ_JBWVBM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56817214
            Assembly: GCF_056863505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas caviae
  ORGANISM  Aeromonas caviae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4526259)
  AUTHORS   Luo,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-APR-2026) Department of Clinical Laboratory, Taizhou
            Municipal Hospital, No. 381-1, Zhongshan East Road, Jiaojiang,
            Taizhou, Zhejiang 318000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWVBM000000000.1.
            The Aeromonas caviae whole genome shotgun (WGS) project has the
            project accession NZ_JBWVBM000000000.  This version of the project
            (01) has the accession number NZ_JBWVBM010000000, and consists of
            sequences JBWVBM010000001-JBWVBM010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: the Oxford Nanopore Technologies
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863505.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:24:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,209
            CDSs (total)                      :: 4,050
            Genes (coding)                    :: 3,985
            CDSs (with protein)               :: 3,985
            Genes (RNA)                       :: 159
            rRNAs                             :: 11, 10, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 11, 10, 10 (5S, 16S, 23S)
            tRNAs                             :: 122
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 25 of 66
            Pseudo Genes (incomplete)         :: 43 of 66
            Pseudo Genes (internal stop)      :: 10 of 66
            Pseudo Genes (multiple problems)  :: 11 of 66
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4526259
                     /organism="Aeromonas caviae"
                     /mol_type="genomic DNA"
                     /strain="K1075"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:648"
                     /geo_loc_name="China: Anhui"
                     /lat_lon="31 N 116 E"
                     /collection_date="2022"
                     /collected_by="Xinhua Luo"
WGS         JBWVBM010000001-JBWVBM010000003
WGS_SCAFLD  NZ_CM166507
WGS_SCAFLD  NZ_JBWVBM010000002-NZ_JBWVBM010000003
//
LOCUS       NZ_JBXGIA010000000   4212303 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus subtilis strain SL29, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGIA000000000
VERSION     NZ_JBXGIA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772375
            Assembly: GCF_056855675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus subtilis
  ORGANISM  Bacillus subtilis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus.
REFERENCE   1  (bases 1 to 4212303)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGIA000000000.1.
            The Bacillus subtilis whole genome shotgun (WGS) project has the
            project accession NZ_JBXGIA000000000.  This version of the project
            (01) has the accession number NZ_JBXGIA010000000, and consists of
            sequences JBXGIA010000001-JBXGIA010000010.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855675.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:00:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,442
            CDSs (total)                      :: 4,369
            Genes (coding)                    :: 4,313
            CDSs (with protein)               :: 4,313
            Genes (RNA)                       :: 73
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 23 of 56
            Pseudo Genes (incomplete)         :: 38 of 56
            Pseudo Genes (internal stop)      :: 7 of 56
            Pseudo Genes (multiple problems)  :: 11 of 56
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4212303
                     /organism="Bacillus subtilis"
                     /mol_type="genomic DNA"
                     /strain="SL29"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:1423"
                     /geo_loc_name="USA: Hillsboro"
                     /lat_lon="47.40 N 97.06 W"
                     /collection_date="2022-08-18"
WGS         JBXGIA010000001-JBXGIA010000010
WGS_SCAFLD  NZ_JBXGIA010000001-NZ_JBXGIA010000010
//
LOCUS       NZ_JBTXOS010000000   3251631 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A19_3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOS000000000
VERSION     NZ_JBTXOS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798557
            Assembly: GCF_056865395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 3251631)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOS000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXOS000000000.  This version of the project
            (01) has the accession number NZ_JBTXOS010000000, and consists of
            sequences JBTXOS010000001-JBTXOS010001038.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865395.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:37:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,839
            CDSs (total)                      :: 3,769
            Genes (coding)                    :: 3,334
            CDSs (with protein)               :: 3,334
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 435
            CDSs (without protein)            :: 435
            Pseudo Genes (ambiguous residues) :: 0 of 435
            Pseudo Genes (frameshifted)       :: 19 of 435
            Pseudo Genes (incomplete)         :: 403 of 435
            Pseudo Genes (internal stop)      :: 27 of 435
            Pseudo Genes (multiple problems)  :: 12 of 435
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3251631
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A19_3"
                     /isolation_source="outpatient surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOS010000001-JBTXOS010001038
WGS_SCAFLD  NZ_JBTXOS010000001-NZ_JBTXOS010001038
//
LOCUS       NZ_JBWNZT010000000   1955134 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Ligilactobacillus salivarius strain PRS-119, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWNZT000000000
VERSION     NZ_JBWNZT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56714575
            Assembly: GCF_056863945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ligilactobacillus salivarius
  ORGANISM  Ligilactobacillus salivarius
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 1955134)
  AUTHORS   Lu,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-MAR-2026) Bioinformatics Department, SuZhou
            PrecisionBio Co., Ltd, 218 Xinghu Street, suzhou 215000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWNZT000000000.1.
            The Ligilactobacillus salivarius whole genome shotgun (WGS) project
            has the project accession NZ_JBWNZT000000000.  This version of the
            project (01) has the accession number NZ_JBWNZT010000000, and
            consists of sequences JBWNZT010000001-JBWNZT010000048.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863945.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:14:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,018
            CDSs (total)                      :: 1,929
            Genes (coding)                    :: 1,882
            CDSs (with protein)               :: 1,882
            Genes (RNA)                       :: 89
            rRNAs                             :: 4, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 2, 5 (16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 47
            CDSs (without protein)            :: 47
            Pseudo Genes (ambiguous residues) :: 0 of 47
            Pseudo Genes (frameshifted)       :: 22 of 47
            Pseudo Genes (incomplete)         :: 20 of 47
            Pseudo Genes (internal stop)      :: 12 of 47
            Pseudo Genes (multiple problems)  :: 7 of 47
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1955134
                     /organism="Ligilactobacillus salivarius"
                     /mol_type="genomic DNA"
                     /strain="PRS-119"
                     /host="Homo sapiens"
                     /db_xref="taxon:1624"
                     /geo_loc_name="China"
                     /collection_date="2023"
WGS         JBWNZT010000001-JBWNZT010000048
WGS_SCAFLD  NZ_JBWNZT010000001-NZ_JBWNZT010000048
//
LOCUS       NZ_JBSYRZ010000000   4820299 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter youngae strain 2SIA11cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRZ000000000
VERSION     NZ_JBSYRZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364837
            Assembly: GCF_056860295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter youngae
  ORGANISM  Citrobacter youngae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 4820299)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4820299)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRZ000000000.1.
            The Citrobacter youngae whole genome shotgun (WGS) project has the
            project accession NZ_JBSYRZ000000000.  This version of the project
            (01) has the accession number NZ_JBSYRZ010000000, and consists of
            sequences JBSYRZ010000001-JBSYRZ010000079.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860295.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:49:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,713
            CDSs (total)                      :: 4,619
            Genes (coding)                    :: 4,514
            CDSs (with protein)               :: 4,514
            Genes (RNA)                       :: 94
            rRNAs                             :: 2, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 36 of 105
            Pseudo Genes (incomplete)         :: 79 of 105
            Pseudo Genes (internal stop)      :: 13 of 105
            Pseudo Genes (multiple problems)  :: 22 of 105
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4820299
                     /organism="Citrobacter youngae"
                     /mol_type="genomic DNA"
                     /strain="2SIA11cef"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:133448"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRZ010000001-JBSYRZ010000079
WGS_SCAFLD  NZ_JBSYRZ010000001-NZ_JBSYRZ010000079
//
LOCUS       NZ_JBTXPC010000000   2654215 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecalis strain HO36, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXPC000000000
VERSION     NZ_JBTXPC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798547
            Assembly: GCF_056865775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2654215)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXPC000000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JBTXPC000000000.  This version of the
            project (01) has the accession number NZ_JBTXPC010000000, and
            consists of sequences JBTXPC010000001-JBTXPC010000029.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865775.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:51:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,535
            CDSs (total)                      :: 2,475
            Genes (coding)                    :: 2,460
            CDSs (with protein)               :: 2,460
            Genes (RNA)                       :: 60
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 15
            CDSs (without protein)            :: 15
            Pseudo Genes (ambiguous residues) :: 0 of 15
            Pseudo Genes (frameshifted)       :: 6 of 15
            Pseudo Genes (incomplete)         :: 8 of 15
            Pseudo Genes (internal stop)      :: 2 of 15
            Pseudo Genes (multiple problems)  :: 1 of 15
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2654215
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="HO36"
                     /isolation_source="emergency surface"
                     /db_xref="taxon:1351"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2025-06-10"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXPC010000001-JBTXPC010000029
WGS_SCAFLD  NZ_JBTXPC010000001-NZ_JBTXPC010000029
//
LOCUS       NZ_JBSSOW010000000   5256238 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 177a, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSOW000000000
VERSION     NZ_JBSSOW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664935
            Assembly: GCF_056862075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5256238)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSOW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSOW000000000.  This version of the project
            (01) has the accession number NZ_JBSSOW010000000, and consists of
            sequences JBSSOW010000001-JBSSOW010000151.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 93.521x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862075.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:07:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,267
            CDSs (total)                      :: 5,149
            Genes (coding)                    :: 4,946
            CDSs (with protein)               :: 4,946
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 5, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 6, 4, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 203
            CDSs (without protein)            :: 203
            Pseudo Genes (ambiguous residues) :: 0 of 203
            Pseudo Genes (frameshifted)       :: 73 of 203
            Pseudo Genes (incomplete)         :: 141 of 203
            Pseudo Genes (internal stop)      :: 25 of 203
            Pseudo Genes (multiple problems)  :: 32 of 203
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5256238
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="177a"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST224"
WGS         JBSSOW010000001-JBSSOW010000151
WGS_SCAFLD  NZ_JBSSOW010000001-NZ_JBSSOW010000151
//
LOCUS       NZ_JBTXOH010000000   2978360 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A78_4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOH000000000
VERSION     NZ_JBTXOH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798569
            Assembly: GCF_056864985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2978360)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOH000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXOH000000000.  This version of the project
            (01) has the accession number NZ_JBTXOH010000000, and consists of
            sequences JBTXOH010000001-JBTXOH010000138.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864985.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:28:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,981
            CDSs (total)                      :: 2,910
            Genes (coding)                    :: 2,796
            CDSs (with protein)               :: 2,796
            Genes (RNA)                       :: 71
            rRNAs                             :: 4, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 1 (5S, 16S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 114
            CDSs (without protein)            :: 114
            Pseudo Genes (ambiguous residues) :: 0 of 114
            Pseudo Genes (frameshifted)       :: 19 of 114
            Pseudo Genes (incomplete)         :: 84 of 114
            Pseudo Genes (internal stop)      :: 22 of 114
            Pseudo Genes (multiple problems)  :: 9 of 114
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2978360
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A78_4"
                     /isolation_source="outpatient air"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOH010000001-JBTXOH010000138
WGS_SCAFLD  NZ_JBTXOH010000001-NZ_JBTXOH010000138
//
LOCUS       NZ_JBVVAA010000000   5325668 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella pneumoniae strain LNTD5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBVVAA000000000
VERSION     NZ_JBVVAA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56043266
            Assembly: GCF_056866275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5325668)
  AUTHORS   Liu,S. and Sun,Y.-Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2026) College of Veterinary Medicine, Qingdao
            Agricultural University, Changcheng Road 700, Qingdao 277000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVVAA000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBVVAA000000000.  This version of the
            project (01) has the accession number NZ_JBVVAA010000000, and
            consists of sequences JBVVAA010000001-JBVVAA010000048.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JAN-2026
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056866275.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:59:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,199
            CDSs (total)                      :: 5,081
            Genes (coding)                    :: 4,995
            CDSs (with protein)               :: 4,995
            Genes (RNA)                       :: 118
            rRNAs                             :: 5, 9, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 9, 10 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 86
            CDSs (without protein)            :: 86
            Pseudo Genes (ambiguous residues) :: 0 of 86
            Pseudo Genes (frameshifted)       :: 46 of 86
            Pseudo Genes (incomplete)         :: 42 of 86
            Pseudo Genes (internal stop)      :: 19 of 86
            Pseudo Genes (multiple problems)  :: 17 of 86
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5325668
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="LNTD5"
                     /isolation_source="feces"
                     /host="Sika deer"
                     /db_xref="taxon:573"
                     /geo_loc_name="China: Liaoning"
                     /lat_lon="41.8057 N 123.4315 E"
                     /collection_date="2024-09"
WGS         JBVVAA010000001-JBVVAA010000048
WGS_SCAFLD  NZ_JBVVAA010000001-NZ_JBVVAA010000048
//
LOCUS       NZ_JBTXOA010000000   2943122 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A83_3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOA000000000
VERSION     NZ_JBTXOA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798576
            Assembly: GCF_056864775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2943122)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOA000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXOA000000000.  This version of the project
            (01) has the accession number NZ_JBTXOA010000000, and consists of
            sequences JBTXOA010000001-JBTXOA010000122.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864775.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:30:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,925
            CDSs (total)                      :: 2,858
            Genes (coding)                    :: 2,767
            CDSs (with protein)               :: 2,767
            Genes (RNA)                       :: 67
            rRNAs                             :: 4, 2 (5S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 2 (5S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 19 of 91
            Pseudo Genes (incomplete)         :: 66 of 91
            Pseudo Genes (internal stop)      :: 17 of 91
            Pseudo Genes (multiple problems)  :: 9 of 91
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2943122
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A83_3"
                     /isolation_source="outpatient air"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOA010000001-JBTXOA010000122
WGS_SCAFLD  NZ_JBTXOA010000001-NZ_JBTXOA010000122
//
LOCUS       NZ_JBWAYV010000000   5343760 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain LL_10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWAYV000000000
VERSION     NZ_JBWAYV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56449257
            Assembly: GCF_056863855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5343760)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Clinical laboratory, The Second Affiliated
            Hospital Zhejiang University of Medicine, No. 88, Jiefang Road,
            Hangzhou, Zhejiang 310009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWAYV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBWAYV000000000.  This version of the project
            (01) has the accession number NZ_JBWAYV010000000, and consists of
            sequences JBWAYV010000001-JBWAYV010000182.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863855.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:32:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,364
            CDSs (total)                      :: 5,263
            Genes (coding)                    :: 5,034
            CDSs (with protein)               :: 5,034
            Genes (RNA)                       :: 101
            rRNAs                             :: 3, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 229
            CDSs (without protein)            :: 229
            Pseudo Genes (ambiguous residues) :: 0 of 229
            Pseudo Genes (frameshifted)       :: 63 of 229
            Pseudo Genes (incomplete)         :: 177 of 229
            Pseudo Genes (internal stop)      :: 34 of 229
            Pseudo Genes (multiple problems)  :: 41 of 229
            Pseudo Genes (short protein)      :: 1 of 229
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5343760
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="LL_10"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Yunnan"
                     /collection_date="2025-12-05"
WGS         JBWAYV010000001-JBWAYV010000182
WGS_SCAFLD  NZ_JBWAYV010000001-NZ_JBWAYV010000182
//
LOCUS       NZ_JBVUZZ010000000   5403780 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella variicola strain LNTD57, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBVUZZ000000000
VERSION     NZ_JBVUZZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56043272
            Assembly: GCF_056866235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella variicola
  ORGANISM  Klebsiella variicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5403780)
  AUTHORS   Liu,S. and Sun,Y.-Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2026) College of Veterinary Medicine, Qingdao
            Agricultural University, Changcheng Road 700, Qingdao 277000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVUZZ000000000.1.
            The Klebsiella variicola whole genome shotgun (WGS) project has the
            project accession NZ_JBVUZZ000000000.  This version of the project
            (01) has the accession number NZ_JBVUZZ010000000, and consists of
            sequences JBVUZZ010000001-JBVUZZ010000044.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JAN-2026
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056866235.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:55:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,250
            CDSs (total)                      :: 5,133
            Genes (coding)                    :: 5,040
            CDSs (with protein)               :: 5,040
            Genes (RNA)                       :: 117
            rRNAs                             :: 7, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 9, 8 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 93
            CDSs (without protein)            :: 93
            Pseudo Genes (ambiguous residues) :: 0 of 93
            Pseudo Genes (frameshifted)       :: 44 of 93
            Pseudo Genes (incomplete)         :: 49 of 93
            Pseudo Genes (internal stop)      :: 17 of 93
            Pseudo Genes (multiple problems)  :: 15 of 93
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5403780
                     /organism="Klebsiella variicola"
                     /mol_type="genomic DNA"
                     /strain="LNTD57"
                     /isolation_source="feces"
                     /host="Sika deer"
                     /db_xref="taxon:244366"
                     /geo_loc_name="China: Liaoning"
                     /lat_lon="41.8057 N 123.4315 E"
                     /collection_date="2024-09"
WGS         JBVUZZ010000001-JBVUZZ010000044
WGS_SCAFLD  NZ_JBVUZZ010000001-NZ_JBVUZZ010000044
//
LOCUS       NZ_JBSSPC010000000   5321841 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 113a, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSPC000000000
VERSION     NZ_JBSSPC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664929
            Assembly: GCF_056862275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5321841)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSPC000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSPC000000000.  This version of the project
            (01) has the accession number NZ_JBSSPC010000000, and consists of
            sequences JBSSPC010000001-JBSSPC010000118.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 98.191x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862275.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:16:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,246
            CDSs (total)                      :: 5,141
            Genes (coding)                    :: 4,926
            CDSs (with protein)               :: 4,926
            Genes (RNA)                       :: 105
            rRNAs                             :: 9, 3, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 2, 7 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 215
            CDSs (without protein)            :: 215
            Pseudo Genes (ambiguous residues) :: 0 of 215
            Pseudo Genes (frameshifted)       :: 77 of 215
            Pseudo Genes (incomplete)         :: 151 of 215
            Pseudo Genes (internal stop)      :: 27 of 215
            Pseudo Genes (multiple problems)  :: 38 of 215
            Pseudo Genes (short protein)      :: 1 of 215
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5321841
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="113a"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST624"
WGS         JBSSPC010000001-JBSSPC010000118
WGS_SCAFLD  NZ_JBSSPC010000001-NZ_JBSSPC010000118
//
LOCUS       NZ_JBXEPZ010000000   3194738 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Heyndrickxia coagulans strain RS24, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXEPZ000000000
VERSION     NZ_JBXEPZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51801086
            Assembly: GCF_056854155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Heyndrickxia coagulans (Bacillus coagulans)
  ORGANISM  Heyndrickxia coagulans
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Heyndrickxia.
REFERENCE   1  (bases 1 to 3194738)
  AUTHORS   Kim,Y.-J., Lee,H.-H., Seo,Y.-J. and Park,C.-S.
  TITLE     Application for Heyndrickxia coagulans RS24 for probiotic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3194738)
  AUTHORS   Kim,Y.-J., Lee,H.-H., Seo,Y.-J. and Park,C.-S.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2025) Food science and biotechnology, KyungHee
            University, Deokyoungdaero, Yongin 17104, South Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEPZ000000000.1.
            The Heyndrickxia coagulans whole genome shotgun (WGS) project has
            the project accession NZ_JBXEPZ000000000.  This version of the
            project (01) has the accession number NZ_JBXEPZ010000000, and
            consists of sequence JBXEPZ010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: FEB-2025
            Assembly Method        :: CCS v. 6.6.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854155.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:49:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,123
            CDSs (total)                      :: 3,005
            Genes (coding)                    :: 2,897
            CDSs (with protein)               :: 2,897
            Genes (RNA)                       :: 118
            rRNAs                             :: 10, 10, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 10, 10, 10 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 39 of 108
            Pseudo Genes (incomplete)         :: 70 of 108
            Pseudo Genes (internal stop)      :: 25 of 108
            Pseudo Genes (multiple problems)  :: 22 of 108
            CRISPR Arrays                     :: 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3194738
                     /organism="Heyndrickxia coagulans"
                     /mol_type="genomic DNA"
                     /strain="RS24"
                     /isolation_source="Rice straw"
                     /db_xref="taxon:1398"
                     /geo_loc_name="South Korea"
                     /lat_lon="34.88516 N 127.4350 E"
                     /collection_date="2024-12-20"
WGS         JBXEPZ010000001
WGS_SCAFLD  NZ_CM166460
//
LOCUS       NZ_JBXEPR010000000   2713643 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain 10K2M, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXEPR000000000
VERSION     NZ_JBXEPR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54275481
            Assembly: GCF_056858165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2713643)
  AUTHORS   Brenciani,A.
  TITLE     optrA-carrying enterococci recovered from soil and river sediments
            of the K2 region, Pakistan
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2713643)
  AUTHORS   Brenciani,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-DEC-2025) Unit of Microbiology, Department of
            Biomedical Sciences & Public Health, Polytechnic University of
            Marche Medical School, Tronto 10/A, Ancona 60126, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEPR000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBXEPR000000000.  This version of the project
            (01) has the accession number NZ_JBXEPR010000000, and consists of
            sequences JBXEPR010000001-JBXEPR010000011.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Complete Genomics
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858165.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:45:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,674
            CDSs (total)                      :: 2,583
            Genes (coding)                    :: 2,447
            CDSs (with protein)               :: 2,447
            Genes (RNA)                       :: 91
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 136
            CDSs (without protein)            :: 136
            Pseudo Genes (ambiguous residues) :: 0 of 136
            Pseudo Genes (frameshifted)       :: 43 of 136
            Pseudo Genes (incomplete)         :: 79 of 136
            Pseudo Genes (internal stop)      :: 34 of 136
            Pseudo Genes (multiple problems)  :: 16 of 136
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2713643
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="10K2M"
                     /isolation_source="river sediment"
                     /db_xref="taxon:1352"
                     /geo_loc_name="Pakistan"
                     /collection_date="2024"
                     /collected_by="Department of Life and Environmental
                     Sciences, Polytechnic University of Marche, Ancona"
WGS         JBXEPR010000001-JBXEPR010000011
WGS_SCAFLD  NZ_CM166489
WGS_SCAFLD  NZ_JBXEPR010000002-NZ_JBXEPR010000011
//
LOCUS       NZ_JBTXNW010000000   2981660 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A87_3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXNW000000000
VERSION     NZ_JBTXNW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798580
            Assembly: GCF_056864645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2981660)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXNW000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXNW000000000.  This version of the project
            (01) has the accession number NZ_JBTXNW010000000, and consists of
            sequences JBTXNW010000001-JBTXNW010000160.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864645.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:23:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,984
            CDSs (total)                      :: 2,914
            Genes (coding)                    :: 2,801
            CDSs (with protein)               :: 2,801
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 113
            CDSs (without protein)            :: 113
            Pseudo Genes (ambiguous residues) :: 0 of 113
            Pseudo Genes (frameshifted)       :: 19 of 113
            Pseudo Genes (incomplete)         :: 83 of 113
            Pseudo Genes (internal stop)      :: 22 of 113
            Pseudo Genes (multiple problems)  :: 9 of 113
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2981660
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A87_3"
                     /isolation_source="emergency surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXNW010000001-JBTXNW010000160
WGS_SCAFLD  NZ_JBTXNW010000001-NZ_JBTXNW010000160
//
LOCUS       NZ_JBVVAF010000000   5682812 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella variicola strain JLLY45, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBVVAF000000000
VERSION     NZ_JBVVAF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56043261
            Assembly: GCF_056866445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella variicola
  ORGANISM  Klebsiella variicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5682812)
  AUTHORS   Liu,S. and Sun,Y.-Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2026) College of Veterinary Medicine, Qingdao
            Agricultural University, Changcheng Road 700, Qingdao 277000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVVAF000000000.1.
            The Klebsiella variicola whole genome shotgun (WGS) project has the
            project accession NZ_JBVVAF000000000.  This version of the project
            (01) has the accession number NZ_JBVVAF010000000, and consists of
            sequences JBVVAF010000001-JBVVAF010000055.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JAN-2026
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056866445.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:58:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,561
            CDSs (total)                      :: 5,449
            Genes (coding)                    :: 5,337
            CDSs (with protein)               :: 5,337
            Genes (RNA)                       :: 112
            rRNAs                             :: 7, 9, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 9, 4 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 48 of 112
            Pseudo Genes (incomplete)         :: 63 of 112
            Pseudo Genes (internal stop)      :: 25 of 112
            Pseudo Genes (multiple problems)  :: 20 of 112
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5682812
                     /organism="Klebsiella variicola"
                     /mol_type="genomic DNA"
                     /strain="JLLY45"
                     /isolation_source="feces"
                     /host="Sika deer"
                     /db_xref="taxon:244366"
                     /geo_loc_name="China: Jilin"
                     /lat_lon="43.8868 N 125.3245 E"
                     /collection_date="2024-10"
WGS         JBVVAF010000001-JBVVAF010000055
WGS_SCAFLD  NZ_JBVVAF010000001-NZ_JBVVAF010000055
//
LOCUS       NZ_JBSSPJ010000000   5006605 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 70b, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSPJ000000000
VERSION     NZ_JBSSPJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664922
            Assembly: GCF_056862595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5006605)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSPJ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSPJ000000000.  This version of the project
            (01) has the accession number NZ_JBSSPJ010000000, and consists of
            sequences JBSSPJ010000001-JBSSPJ010000077.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 93.334x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862595.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:59:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,871
            CDSs (total)                      :: 4,773
            Genes (coding)                    :: 4,639
            CDSs (with protein)               :: 4,639
            Genes (RNA)                       :: 98
            rRNAs                             :: 8, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 6, 4 (5S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 134
            CDSs (without protein)            :: 134
            Pseudo Genes (ambiguous residues) :: 0 of 134
            Pseudo Genes (frameshifted)       :: 51 of 134
            Pseudo Genes (incomplete)         :: 98 of 134
            Pseudo Genes (internal stop)      :: 22 of 134
            Pseudo Genes (multiple problems)  :: 32 of 134
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5006605
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="70b"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST457"
WGS         JBSSPJ010000001-JBSSPJ010000077
WGS_SCAFLD  NZ_JBSSPJ010000001-NZ_JBSSPJ010000077
//
LOCUS       NZ_JBTXOK010000000   2988010 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A76_7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOK000000000
VERSION     NZ_JBTXOK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798566
            Assembly: GCF_056865085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2988010)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOK000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXOK000000000.  This version of the project
            (01) has the accession number NZ_JBTXOK010000000, and consists of
            sequences JBTXOK010000001-JBTXOK010000177.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865085.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:30:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,995
            CDSs (total)                      :: 2,925
            Genes (coding)                    :: 2,810
            CDSs (with protein)               :: 2,810
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 19 of 115
            Pseudo Genes (incomplete)         :: 85 of 115
            Pseudo Genes (internal stop)      :: 22 of 115
            Pseudo Genes (multiple problems)  :: 9 of 115
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2988010
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A76_7"
                     /isolation_source="emergency surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOK010000001-JBTXOK010000177
WGS_SCAFLD  NZ_JBTXOK010000001-NZ_JBTXOK010000177
//
LOCUS       NZ_JBSSPE010000000   5004409 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 88c, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSPE000000000
VERSION     NZ_JBSSPE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664927
            Assembly: GCF_056862395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5004409)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSPE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSPE000000000.  This version of the project
            (01) has the accession number NZ_JBSSPE010000000, and consists of
            sequences JBSSPE010000001-JBSSPE010000089.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 87.803x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862395.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:47:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,875
            CDSs (total)                      :: 4,768
            Genes (coding)                    :: 4,632
            CDSs (with protein)               :: 4,632
            Genes (RNA)                       :: 107
            rRNAs                             :: 8, 1, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 6, 9 (5S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 136
            CDSs (without protein)            :: 136
            Pseudo Genes (ambiguous residues) :: 0 of 136
            Pseudo Genes (frameshifted)       :: 50 of 136
            Pseudo Genes (incomplete)         :: 100 of 136
            Pseudo Genes (internal stop)      :: 22 of 136
            Pseudo Genes (multiple problems)  :: 31 of 136
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5004409
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="88c"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST457"
WGS         JBSSPE010000001-JBSSPE010000089
WGS_SCAFLD  NZ_JBSSPE010000001-NZ_JBSSPE010000089
//
LOCUS       NZ_JBTXNK010000000   3306131 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A110_8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXNK000000000
VERSION     NZ_JBTXNK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798592
            Assembly: GCF_056862985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 3306131)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXNK000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXNK000000000.  This version of the project
            (01) has the accession number NZ_JBTXNK010000000, and consists of
            sequences JBTXNK010000001-JBTXNK010000372.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862985.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:03:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,414
            CDSs (total)                      :: 3,344
            Genes (coding)                    :: 3,125
            CDSs (with protein)               :: 3,125
            Genes (RNA)                       :: 70
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 1 (5S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 219
            CDSs (without protein)            :: 219
            Pseudo Genes (ambiguous residues) :: 0 of 219
            Pseudo Genes (frameshifted)       :: 48 of 219
            Pseudo Genes (incomplete)         :: 152 of 219
            Pseudo Genes (internal stop)      :: 37 of 219
            Pseudo Genes (multiple problems)  :: 15 of 219
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3306131
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A110_8"
                     /isolation_source="outpatient surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2025-03-17"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXNK010000001-JBTXNK010000372
WGS_SCAFLD  NZ_JBTXNK010000001-NZ_JBTXNK010000372
//
LOCUS       NZ_JBTXOR010000000   2983416 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A27_1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOR000000000
VERSION     NZ_JBTXOR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798558
            Assembly: GCF_056865425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2983416)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOR000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXOR000000000.  This version of the project
            (01) has the accession number NZ_JBTXOR010000000, and consists of
            sequences JBTXOR010000001-JBTXOR010000175.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865425.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:47:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,018
            CDSs (total)                      :: 2,948
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 19 of 123
            Pseudo Genes (incomplete)         :: 93 of 123
            Pseudo Genes (internal stop)      :: 22 of 123
            Pseudo Genes (multiple problems)  :: 9 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2983416
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A27_1"
                     /isolation_source="emergency air"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOR010000001-JBTXOR010000175
WGS_SCAFLD  NZ_JBTXOR010000001-NZ_JBTXOR010000175
//
LOCUS       NZ_JBXEQG010000000   4198680 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Litorisediminivivens sp. KMU-197, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXEQG000000000
VERSION     NZ_JBXEQG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56644826
            Assembly: GCF_056858395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Litorisediminivivens sp. KMU-197
  ORGANISM  Litorisediminivivens sp. KMU-197
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Litorisediminivivens.
REFERENCE   1  (bases 1 to 4198680)
  AUTHORS   Yoon,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2026) College of Pharmacy, Keimyung University,
            1095 Dalgubeoldaero, Dalseo-gu, Daegu si 42601, South Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEQG000000000.1.
            The Litorisediminivivens sp. KMU-197 whole genome shotgun (WGS)
            project has the project accession NZ_JBXEQG000000000.  This version
            of the project (01) has the accession number NZ_JBXEQG010000000,
            and consists of sequences JBXEQG010000001-JBXEQG010000031.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1270.1x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858395.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:22:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,016
            CDSs (total)                      :: 3,965
            Genes (coding)                    :: 3,945
            CDSs (with protein)               :: 3,945
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 8 of 20
            Pseudo Genes (incomplete)         :: 14 of 20
            Pseudo Genes (internal stop)      :: 6 of 20
            Pseudo Genes (multiple problems)  :: 7 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4198680
                     /organism="Litorisediminivivens sp. KMU-197"
                     /mol_type="genomic DNA"
                     /strain="KMU-197"
                     /isolation_source="seawater"
                     /db_xref="taxon:3479383"
                     /geo_loc_name="South Korea: Gyeongju"
                     /collection_date="2025-08"
WGS         JBXEQG010000001-JBXEQG010000031
WGS_SCAFLD  NZ_JBXEQG010000001-NZ_JBXEQG010000031
//
LOCUS       NZ_JBSXOL010000000   4074825 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Halopseudomonas sp. L-64, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXOL000000000
VERSION     NZ_JBSXOL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312087
            Assembly: GCF_056859435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Halopseudomonas sp. L-64
  ORGANISM  Halopseudomonas sp. L-64
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Halopseudomonas.
REFERENCE   1  (bases 1 to 4074825)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXOL000000000.1.
            The Halopseudomonas sp. L-64 whole genome shotgun (WGS) project has
            the project accession NZ_JBSXOL000000000.  This version of the
            project (01) has the accession number NZ_JBSXOL010000000, and
            consists of sequences JBSXOL010000001-JBSXOL010000094.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 308.36x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859435.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:39:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,808
            CDSs (total)                      :: 3,747
            Genes (coding)                    :: 3,671
            CDSs (with protein)               :: 3,671
            Genes (RNA)                       :: 61
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 13 of 76
            Pseudo Genes (incomplete)         :: 61 of 76
            Pseudo Genes (internal stop)      :: 14 of 76
            Pseudo Genes (multiple problems)  :: 9 of 76
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4074825
                     /organism="Halopseudomonas sp. L-64"
                     /mol_type="genomic DNA"
                     /strain="L-64"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472706"
                     /geo_loc_name="Indian Ocean: Southwestern Indian Ridge"
                     /lat_lon="37.91465 S 49.28191 E"
                     /collection_date="2024-05"
WGS         JBSXOL010000001-JBSXOL010000094
WGS_SCAFLD  NZ_JBSXOL010000001-NZ_JBSXOL010000094
//
LOCUS       NZ_JBSXOS010000000   3828743 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Flagellimonas sp. L-3, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXOS000000000
VERSION     NZ_JBSXOS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312080
            Assembly: GCF_056859575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Flagellimonas sp. L-3
  ORGANISM  Flagellimonas sp. L-3
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flagellimonas.
REFERENCE   1  (bases 1 to 3828743)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXOS000000000.1.
            The Flagellimonas sp. L-3 whole genome shotgun (WGS) project has
            the project accession NZ_JBSXOS000000000.  This version of the
            project (01) has the accession number NZ_JBSXOS010000000, and
            consists of sequences JBSXOS010000001-JBSXOS010000081.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 330.34x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859575.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:20:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,521
            CDSs (total)                      :: 3,473
            Genes (coding)                    :: 3,439
            CDSs (with protein)               :: 3,439
            Genes (RNA)                       :: 48
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 2 (5S, 16S)
            tRNAs                             :: 37
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 12 of 34
            Pseudo Genes (incomplete)         :: 25 of 34
            Pseudo Genes (internal stop)      :: 8 of 34
            Pseudo Genes (multiple problems)  :: 10 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3828743
                     /organism="Flagellimonas sp. L-3"
                     /mol_type="genomic DNA"
                     /strain="L-3"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472699"
                     /geo_loc_name="Indian Ocean: Southwestern Indian Ridge"
                     /lat_lon="37.93805 S 49.26156 E"
                     /collection_date="2024-05"
WGS         JBSXOS010000001-JBSXOS010000081
WGS_SCAFLD  NZ_JBSXOS010000001-NZ_JBSXOS010000081
//
LOCUS       NZ_JBSXNR010000000   3827951 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Flagellimonas sp. L-11, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXNR000000000
VERSION     NZ_JBSXNR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312069
            Assembly: GCF_056857735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Flagellimonas sp. L-11
  ORGANISM  Flagellimonas sp. L-11
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flagellimonas.
REFERENCE   1  (bases 1 to 3827951)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXNR000000000.1.
            The Flagellimonas sp. L-11 whole genome shotgun (WGS) project has
            the project accession NZ_JBSXNR000000000.  This version of the
            project (01) has the accession number NZ_JBSXNR010000000, and
            consists of sequences JBSXNR010000001-JBSXNR010000081.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 307.63x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857735.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:05:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,517
            CDSs (total)                      :: 3,469
            Genes (coding)                    :: 3,434
            CDSs (with protein)               :: 3,434
            Genes (RNA)                       :: 48
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 2 (5S, 16S)
            tRNAs                             :: 37
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 13 of 35
            Pseudo Genes (incomplete)         :: 25 of 35
            Pseudo Genes (internal stop)      :: 8 of 35
            Pseudo Genes (multiple problems)  :: 10 of 35
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3827951
                     /organism="Flagellimonas sp. L-11"
                     /mol_type="genomic DNA"
                     /strain="L-11"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472688"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.69187 N 63.83227 E"
                     /collection_date="2022-06"
WGS         JBSXNR010000001-JBSXNR010000081
WGS_SCAFLD  NZ_JBSXNR010000001-NZ_JBSXNR010000081
//
LOCUS       NZ_JBVVAG010000000   5493178 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella variicola strain JLLY31, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBVVAG000000000
VERSION     NZ_JBVVAG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56043259
            Assembly: GCF_056866505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella variicola
  ORGANISM  Klebsiella variicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5493178)
  AUTHORS   Liu,S. and Sun,Y.-Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2026) College of Veterinary Medicine, Qingdao
            Agricultural University, Changcheng Road 700, Qingdao 277000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVVAG000000000.1.
            The Klebsiella variicola whole genome shotgun (WGS) project has the
            project accession NZ_JBVVAG000000000.  This version of the project
            (01) has the accession number NZ_JBVVAG010000000, and consists of
            sequences JBVVAG010000001-JBVVAG010000035.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JAN-2026
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056866505.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:00:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,373
            CDSs (total)                      :: 5,261
            Genes (coding)                    :: 5,151
            CDSs (with protein)               :: 5,151
            Genes (RNA)                       :: 112
            rRNAs                             :: 7, 8, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 8, 6 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 110
            CDSs (without protein)            :: 110
            Pseudo Genes (ambiguous residues) :: 0 of 110
            Pseudo Genes (frameshifted)       :: 47 of 110
            Pseudo Genes (incomplete)         :: 72 of 110
            Pseudo Genes (internal stop)      :: 17 of 110
            Pseudo Genes (multiple problems)  :: 22 of 110
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5493178
                     /organism="Klebsiella variicola"
                     /mol_type="genomic DNA"
                     /strain="JLLY31"
                     /isolation_source="feces"
                     /host="Sika deer"
                     /db_xref="taxon:244366"
                     /geo_loc_name="China: Jilin"
                     /lat_lon="43.8868 N 125.3245 E"
                     /collection_date="2024-10"
WGS         JBVVAG010000001-JBVVAG010000035
WGS_SCAFLD  NZ_JBVVAG010000001-NZ_JBVVAG010000035
//
LOCUS       NZ_JBVUZW010000000   5599088 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella variicola strain SDYD2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBVUZW000000000
VERSION     NZ_JBVUZW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56043279
            Assembly: GCF_056866115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella variicola
  ORGANISM  Klebsiella variicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5599088)
  AUTHORS   Liu,S. and Sun,Y.-Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2026) College of Veterinary Medicine, Qingdao
            Agricultural University, Changcheng Road 700, Qingdao 277000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVUZW000000000.1.
            The Klebsiella variicola whole genome shotgun (WGS) project has the
            project accession NZ_JBVUZW000000000.  This version of the project
            (01) has the accession number NZ_JBVUZW010000000, and consists of
            sequences JBVUZW010000001-JBVUZW010000042.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JAN-2026
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056866115.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:00:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,476
            CDSs (total)                      :: 5,362
            Genes (coding)                    :: 5,244
            CDSs (with protein)               :: 5,244
            Genes (RNA)                       :: 114
            rRNAs                             :: 9, 6, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 7, 6, 4 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 51 of 118
            Pseudo Genes (incomplete)         :: 65 of 118
            Pseudo Genes (internal stop)      :: 28 of 118
            Pseudo Genes (multiple problems)  :: 23 of 118
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5599088
                     /organism="Klebsiella variicola"
                     /mol_type="genomic DNA"
                     /strain="SDYD2"
                     /isolation_source="feces"
                     /host="Sika deer"
                     /db_xref="taxon:244366"
                     /geo_loc_name="China: Shandong"
                     /lat_lon="36.6512 N 117.1201 E"
                     /collection_date="2024-09"
WGS         JBVUZW010000001-JBVUZW010000042
WGS_SCAFLD  NZ_JBVUZW010000001-NZ_JBVUZW010000042
//
LOCUS       NZ_JBSXOA010000000   3377542 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Gracilimonas sp. B-17, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXOA000000000
VERSION     NZ_JBSXOA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312060
            Assembly: GCF_056857935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Gracilimonas sp. B-17
  ORGANISM  Gracilimonas sp. B-17
            Bacteria; Pseudomonadati; Balneolota; Balneolia; Balneolales;
            Balneolaceae; Gracilimonas.
REFERENCE   1  (bases 1 to 3377542)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXOA000000000.1.
            The Gracilimonas sp. B-17 whole genome shotgun (WGS) project has
            the project accession NZ_JBSXOA000000000.  This version of the
            project (01) has the accession number NZ_JBSXOA010000000, and
            consists of sequences JBSXOA010000001-JBSXOA010000012.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 369.21x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857935.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:52:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,950
            CDSs (total)                      :: 2,903
            Genes (coding)                    :: 2,892
            CDSs (with protein)               :: 2,892
            Genes (RNA)                       :: 47
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 3 of 11
            Pseudo Genes (incomplete)         :: 7 of 11
            Pseudo Genes (internal stop)      :: 2 of 11
            Pseudo Genes (multiple problems)  :: 1 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3377542
                     /organism="Gracilimonas sp. B-17"
                     /mol_type="genomic DNA"
                     /strain="B-17"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472679"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.71773 N 63.86117 E"
                     /collection_date="2022-06"
WGS         JBSXOA010000001-JBSXOA010000012
WGS_SCAFLD  NZ_JBSXOA010000001-NZ_JBSXOA010000012
//
LOCUS       NZ_JBVVAI010000000   5705839 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella variicola strain JLLY2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBVVAI000000000
VERSION     NZ_JBVVAI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56043256
            Assembly: GCF_056866555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella variicola
  ORGANISM  Klebsiella variicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5705839)
  AUTHORS   Liu,S. and Sun,Y.-Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2026) College of Veterinary Medicine, Qingdao
            Agricultural University, Changcheng Road 700, Qingdao 277000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVVAI000000000.1.
            The Klebsiella variicola whole genome shotgun (WGS) project has the
            project accession NZ_JBVVAI000000000.  This version of the project
            (01) has the accession number NZ_JBVVAI010000000, and consists of
            sequences JBVVAI010000001-JBVVAI010000087.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JAN-2026
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056866555.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:15:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,591
            CDSs (total)                      :: 5,470
            Genes (coding)                    :: 5,355
            CDSs (with protein)               :: 5,355
            Genes (RNA)                       :: 121
            rRNAs                             :: 11, 7, 13 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 9, 7, 13 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 49 of 115
            Pseudo Genes (incomplete)         :: 66 of 115
            Pseudo Genes (internal stop)      :: 20 of 115
            Pseudo Genes (multiple problems)  :: 18 of 115
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5705839
                     /organism="Klebsiella variicola"
                     /mol_type="genomic DNA"
                     /strain="JLLY2"
                     /isolation_source="feces"
                     /host="Sika deer"
                     /db_xref="taxon:244366"
                     /geo_loc_name="China: Jilin"
                     /lat_lon="43.8868 N 125.3245 E"
                     /collection_date="2024-10"
WGS         JBVVAI010000001-JBVVAI010000087
WGS_SCAFLD  NZ_JBVVAI010000001-NZ_JBVVAI010000087
//
LOCUS       NZ_JBSSOV010000000   5203885 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 187a, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSOV000000000
VERSION     NZ_JBSSOV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664936
            Assembly: GCF_056862045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5203885)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSOV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSOV000000000.  This version of the project
            (01) has the accession number NZ_JBSSOV010000000, and consists of
            sequences JBSSOV010000001-JBSSOV010000144.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 112.934x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862045.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:13:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,200
            CDSs (total)                      :: 5,083
            Genes (coding)                    :: 4,890
            CDSs (with protein)               :: 4,890
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 5, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 6, 4, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 193
            CDSs (without protein)            :: 193
            Pseudo Genes (ambiguous residues) :: 0 of 193
            Pseudo Genes (frameshifted)       :: 71 of 193
            Pseudo Genes (incomplete)         :: 134 of 193
            Pseudo Genes (internal stop)      :: 24 of 193
            Pseudo Genes (multiple problems)  :: 32 of 193
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5203885
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="187a"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST224"
WGS         JBSSOV010000001-JBSSOV010000144
WGS_SCAFLD  NZ_JBSSOV010000001-NZ_JBSSOV010000144
//
LOCUS       NZ_JBVVAB010000000   5496868 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella variicola strain HLDD28, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBVVAB000000000
VERSION     NZ_JBVVAB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56043265
            Assembly: GCF_056866305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella variicola
  ORGANISM  Klebsiella variicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5496868)
  AUTHORS   Liu,S. and Sun,Y.-Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2026) College of Veterinary Medicine, Qingdao
            Agricultural University, Changcheng Road 700, Qingdao 277000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVVAB000000000.1.
            The Klebsiella variicola whole genome shotgun (WGS) project has the
            project accession NZ_JBVVAB000000000.  This version of the project
            (01) has the accession number NZ_JBVVAB010000000, and consists of
            sequences JBVVAB010000001-JBVVAB010000022.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JAN-2026
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056866305.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:56:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,330
            CDSs (total)                      :: 5,220
            Genes (coding)                    :: 5,124
            CDSs (with protein)               :: 5,124
            Genes (RNA)                       :: 110
            rRNAs                             :: 8, 6, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 6, 6, 4 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 96
            CDSs (without protein)            :: 96
            Pseudo Genes (ambiguous residues) :: 0 of 96
            Pseudo Genes (frameshifted)       :: 45 of 96
            Pseudo Genes (incomplete)         :: 50 of 96
            Pseudo Genes (internal stop)      :: 21 of 96
            Pseudo Genes (multiple problems)  :: 17 of 96
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5496868
                     /organism="Klebsiella variicola"
                     /mol_type="genomic DNA"
                     /strain="HLDD28"
                     /isolation_source="feces"
                     /host="Sika deer"
                     /db_xref="taxon:244366"
                     /geo_loc_name="China: Heilongjiang"
                     /lat_lon="45.8038 N 126.5349 E"
                     /collection_date="2024-10"
WGS         JBVVAB010000001-JBVVAB010000022
WGS_SCAFLD  NZ_JBVVAB010000001-NZ_JBVVAB010000022
//
LOCUS       NZ_JBVVAD010000000   5496489 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella variicola strain HLDD8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBVVAD000000000
VERSION     NZ_JBVVAD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56043263
            Assembly: GCF_056866405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella variicola
  ORGANISM  Klebsiella variicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5496489)
  AUTHORS   Liu,S. and Sun,Y.-Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2026) College of Veterinary Medicine, Qingdao
            Agricultural University, Changcheng Road 700, Qingdao 277000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVVAD000000000.1.
            The Klebsiella variicola whole genome shotgun (WGS) project has the
            project accession NZ_JBVVAD000000000.  This version of the project
            (01) has the accession number NZ_JBVVAD010000000, and consists of
            sequences JBVVAD010000001-JBVVAD010000018.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JAN-2026
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056866405.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:58:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,330
            CDSs (total)                      :: 5,220
            Genes (coding)                    :: 5,123
            CDSs (with protein)               :: 5,123
            Genes (RNA)                       :: 110
            rRNAs                             :: 8, 5, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 6, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 97
            CDSs (without protein)            :: 97
            Pseudo Genes (ambiguous residues) :: 0 of 97
            Pseudo Genes (frameshifted)       :: 45 of 97
            Pseudo Genes (incomplete)         :: 51 of 97
            Pseudo Genes (internal stop)      :: 21 of 97
            Pseudo Genes (multiple problems)  :: 17 of 97
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5496489
                     /organism="Klebsiella variicola"
                     /mol_type="genomic DNA"
                     /strain="HLDD8"
                     /isolation_source="feces"
                     /host="Sika deer"
                     /db_xref="taxon:244366"
                     /geo_loc_name="China: Heilongjiang"
                     /lat_lon="45.8038 N 126.5349 E"
                     /collection_date="2024-10"
WGS         JBVVAD010000001-JBVVAD010000018
WGS_SCAFLD  NZ_JBVVAD010000001-NZ_JBVVAD010000018
//
LOCUS       NZ_JBSSPI010000000   5213677 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 70c, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSPI000000000
VERSION     NZ_JBSSPI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664923
            Assembly: GCF_056862505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5213677)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSPI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSPI000000000.  This version of the project
            (01) has the accession number NZ_JBSSPI010000000, and consists of
            sequences JBSSPI010000001-JBSSPI010000106.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 66.697x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862505.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:15:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,189
            CDSs (total)                      :: 5,081
            Genes (coding)                    :: 4,884
            CDSs (with protein)               :: 4,884
            Genes (RNA)                       :: 108
            rRNAs                             :: 8, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5, 3, 1 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 197
            CDSs (without protein)            :: 197
            Pseudo Genes (ambiguous residues) :: 0 of 197
            Pseudo Genes (frameshifted)       :: 71 of 197
            Pseudo Genes (incomplete)         :: 134 of 197
            Pseudo Genes (internal stop)      :: 32 of 197
            Pseudo Genes (multiple problems)  :: 34 of 197
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5213677
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="70c"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST162"
WGS         JBSSPI010000001-JBSSPI010000106
WGS_SCAFLD  NZ_JBSSPI010000001-NZ_JBSSPI010000106
//
LOCUS       NZ_JBVUZX010000000   5752348 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella variicola strain LNTD93, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBVUZX000000000
VERSION     NZ_JBVUZX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56043275
            Assembly: GCF_056866185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella variicola
  ORGANISM  Klebsiella variicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5752348)
  AUTHORS   Liu,S. and Sun,Y.-Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2026) College of Veterinary Medicine, Qingdao
            Agricultural University, Changcheng Road 700, Qingdao 277000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVUZX000000000.1.
            The Klebsiella variicola whole genome shotgun (WGS) project has the
            project accession NZ_JBVUZX000000000.  This version of the project
            (01) has the accession number NZ_JBVUZX010000000, and consists of
            sequences JBVUZX010000001-JBVUZX010000066.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JAN-2026
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056866185.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:57:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,646
            CDSs (total)                      :: 5,515
            Genes (coding)                    :: 5,395
            CDSs (with protein)               :: 5,395
            Genes (RNA)                       :: 131
            rRNAs                             :: 13, 11, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 11, 11, 10 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 16
            Pseudo Genes (total)              :: 120
            CDSs (without protein)            :: 120
            Pseudo Genes (ambiguous residues) :: 0 of 120
            Pseudo Genes (frameshifted)       :: 48 of 120
            Pseudo Genes (incomplete)         :: 76 of 120
            Pseudo Genes (internal stop)      :: 27 of 120
            Pseudo Genes (multiple problems)  :: 26 of 120
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5752348
                     /organism="Klebsiella variicola"
                     /mol_type="genomic DNA"
                     /strain="LNTD93"
                     /isolation_source="feces"
                     /host="Sika deer"
                     /db_xref="taxon:244366"
                     /geo_loc_name="China: Liaoning"
                     /lat_lon="41.8057 N 123.4315 E"
                     /collection_date="2024-09"
WGS         JBVUZX010000001-JBVUZX010000066
WGS_SCAFLD  NZ_JBVUZX010000001-NZ_JBVUZX010000066
//
LOCUS       NZ_JBSSPL010000000   5321506 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 43c, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSPL000000000
VERSION     NZ_JBSSPL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664920
            Assembly: GCF_056862645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5321506)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSPL000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSPL000000000.  This version of the project
            (01) has the accession number NZ_JBSSPL010000000, and consists of
            sequences JBSSPL010000001-JBSSPL010000112.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 72.486x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862645.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:59:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,243
            CDSs (total)                      :: 5,142
            Genes (coding)                    :: 4,925
            CDSs (with protein)               :: 4,925
            Genes (RNA)                       :: 101
            rRNAs                             :: 9, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 7, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 217
            CDSs (without protein)            :: 217
            Pseudo Genes (ambiguous residues) :: 0 of 217
            Pseudo Genes (frameshifted)       :: 77 of 217
            Pseudo Genes (incomplete)         :: 153 of 217
            Pseudo Genes (internal stop)      :: 27 of 217
            Pseudo Genes (multiple problems)  :: 38 of 217
            Pseudo Genes (short protein)      :: 1 of 217
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5321506
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="43c"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST624"
WGS         JBSSPL010000001-JBSSPL010000112
WGS_SCAFLD  NZ_JBSSPL010000001-NZ_JBSSPL010000112
//
LOCUS       NZ_JBVVAC010000000   5643301 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella variicola strain HLDD26, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBVVAC000000000
VERSION     NZ_JBVVAC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56043264
            Assembly: GCF_056866345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella variicola
  ORGANISM  Klebsiella variicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5643301)
  AUTHORS   Liu,S. and Sun,Y.-Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2026) College of Veterinary Medicine, Qingdao
            Agricultural University, Changcheng Road 700, Qingdao 277000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVVAC000000000.1.
            The Klebsiella variicola whole genome shotgun (WGS) project has the
            project accession NZ_JBVVAC000000000.  This version of the project
            (01) has the accession number NZ_JBVVAC010000000, and consists of
            sequences JBVVAC010000001-JBVVAC010000026.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JAN-2026
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056866345.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:55:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,523
            CDSs (total)                      :: 5,415
            Genes (coding)                    :: 5,297
            CDSs (with protein)               :: 5,297
            Genes (RNA)                       :: 108
            rRNAs                             :: 7, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 5, 4, 5 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 49 of 118
            Pseudo Genes (incomplete)         :: 65 of 118
            Pseudo Genes (internal stop)      :: 25 of 118
            Pseudo Genes (multiple problems)  :: 17 of 118
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5643301
                     /organism="Klebsiella variicola"
                     /mol_type="genomic DNA"
                     /strain="HLDD26"
                     /isolation_source="feces"
                     /host="Sika deer"
                     /db_xref="taxon:244366"
                     /geo_loc_name="China: Heilongjiang"
                     /lat_lon="45.8038 N 126.5349 E"
                     /collection_date="2024-10"
WGS         JBVVAC010000001-JBVVAC010000026
WGS_SCAFLD  NZ_JBVVAC010000001-NZ_JBVVAC010000026
//
LOCUS       NZ_JBVUZY010000000   5636963 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella variicola strain LNTD60, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBVUZY000000000
VERSION     NZ_JBVUZY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56043273
            Assembly: GCF_056866155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella variicola
  ORGANISM  Klebsiella variicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5636963)
  AUTHORS   Liu,S. and Sun,Y.-Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2026) College of Veterinary Medicine, Qingdao
            Agricultural University, Changcheng Road 700, Qingdao 277000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVUZY000000000.1.
            The Klebsiella variicola whole genome shotgun (WGS) project has the
            project accession NZ_JBVUZY000000000.  This version of the project
            (01) has the accession number NZ_JBVUZY010000000, and consists of
            sequences JBVUZY010000001-JBVUZY010000057.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JAN-2026
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056866155.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:58:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,562
            CDSs (total)                      :: 5,439
            Genes (coding)                    :: 5,316
            CDSs (with protein)               :: 5,316
            Genes (RNA)                       :: 123
            rRNAs                             :: 11, 5, 11 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 8, 5, 11 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 42 of 123
            Pseudo Genes (incomplete)         :: 74 of 123
            Pseudo Genes (internal stop)      :: 27 of 123
            Pseudo Genes (multiple problems)  :: 19 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5636963
                     /organism="Klebsiella variicola"
                     /mol_type="genomic DNA"
                     /strain="LNTD60"
                     /isolation_source="feces"
                     /host="Sika deer"
                     /db_xref="taxon:244366"
                     /geo_loc_name="China: Liaoning"
                     /lat_lon="41.8057 N 123.4315 E"
                     /collection_date="2024-09"
WGS         JBVUZY010000001-JBVUZY010000057
WGS_SCAFLD  NZ_JBVUZY010000001-NZ_JBVUZY010000057
//
LOCUS       NZ_JBSXNL010000000   4124687 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Galbibacter sp. L-19, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXNL000000000
VERSION     NZ_JBSXNL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312075
            Assembly: GCF_056857615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Galbibacter sp. L-19
  ORGANISM  Galbibacter sp. L-19
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Galbibacter.
REFERENCE   1  (bases 1 to 4124687)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXNL000000000.1.
            The Galbibacter sp. L-19 whole genome shotgun (WGS) project has the
            project accession NZ_JBSXNL000000000.  This version of the project
            (01) has the accession number NZ_JBSXNL010000000, and consists of
            sequences JBSXNL010000001-JBSXNL010000074.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 295.37x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857615.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:09:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,580
            CDSs (total)                      :: 3,533
            Genes (coding)                    :: 3,495
            CDSs (with protein)               :: 3,495
            Genes (RNA)                       :: 47
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 39
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 38
            CDSs (without protein)            :: 38
            Pseudo Genes (ambiguous residues) :: 0 of 38
            Pseudo Genes (frameshifted)       :: 5 of 38
            Pseudo Genes (incomplete)         :: 31 of 38
            Pseudo Genes (internal stop)      :: 5 of 38
            Pseudo Genes (multiple problems)  :: 3 of 38
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4124687
                     /organism="Galbibacter sp. L-19"
                     /mol_type="genomic DNA"
                     /strain="L-19"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472694"
                     /geo_loc_name="Indian Ocean: Southwestern Indian Ridge"
                     /lat_lon="37.93805 S 49.26156 E"
                     /collection_date="2024-05"
WGS         JBSXNL010000001-JBSXNL010000074
WGS_SCAFLD  NZ_JBSXNL010000001-NZ_JBSXNL010000074
//
LOCUS       NZ_JBXFXH010000000   5045153 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter sp. QK-SA4, whole genome shotgun sequencing project.
ACCESSION   NZ_JBXFXH000000000
VERSION     NZ_JBXFXH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN57236572
            Assembly: GCF_056856775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter sp. QK-SA4
  ORGANISM  Enterobacter sp. QK-SA4
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter.
REFERENCE   1  (bases 1 to 5045153)
  AUTHORS   Cossio-Bayugar,R., Arreguin-Perez,C.A., Amaro,I., Aguilar-Diaz,H.
            and Miranda-Miranda,E.
  TITLE     A Novel Entomopathogenic Enterobacter sp. with Acaricidal Activity
            against Rhipicephalus microplus: Multilocus Phylogenetic Evidence
            and Biocontrol Potential
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5045153)
  AUTHORS   Cossio-Bayugar,R., Arreguin-Perez,C.A., Amaro,I., Aguilar-Diaz,H.
            and Miranda-Miranda,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2026) CENID-SAI, Instituto Nacional de
            Investigaciones Forestales Agricolas y Pecuarias,
            Cuernavaca-Cuautla 8534, Jiutepec, Morelos 62574, Mexico
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFXH000000000.1.
            The Enterobacter sp. QK-SA4 whole genome shotgun (WGS) project has
            the project accession NZ_JBXFXH000000000.  This version of the
            project (01) has the accession number NZ_JBXFXH010000000, and
            consists of sequences JBXFXH010000001-JBXFXH010000007.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 23-JUN-2024
            Assembly Method        :: Flye v. 2.9.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 42.25x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856775.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:18:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,917
            CDSs (total)                      :: 4,802
            Genes (coding)                    :: 4,687
            CDSs (with protein)               :: 4,687
            Genes (RNA)                       :: 115
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 28 of 115
            Pseudo Genes (incomplete)         :: 88 of 115
            Pseudo Genes (internal stop)      :: 15 of 115
            Pseudo Genes (multiple problems)  :: 12 of 115
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5045153
                     /organism="Enterobacter sp. QK-SA4"
                     /mol_type="genomic DNA"
                     /strain="QK-SA4"
                     /isolation_source="Bovine"
                     /host="Rhipicephalus microplus"
                     /db_xref="taxon:3700072"
                     /geo_loc_name="Mexico: Morelos"
                     /lat_lon="18.88527737 N 99.15698333 W"
                     /collection_date="2016"
WGS         JBXFXH010000001-JBXFXH010000007
WGS_SCAFLD  NZ_JBXFXH010000001-NZ_JBXFXH010000007
//
LOCUS       NZ_JBTXOJ010000000   3021571 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A77_1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOJ000000000
VERSION     NZ_JBTXOJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798567
            Assembly: GCF_056865115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 3021571)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOJ000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXOJ000000000.  This version of the project
            (01) has the accession number NZ_JBTXOJ010000000, and consists of
            sequences JBTXOJ010000001-JBTXOJ010000311.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865115.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:28:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,108
            CDSs (total)                      :: 3,035
            Genes (coding)                    :: 2,910
            CDSs (with protein)               :: 2,910
            Genes (RNA)                       :: 73
            rRNAs                             :: 4, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 2 (5S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 125
            CDSs (without protein)            :: 125
            Pseudo Genes (ambiguous residues) :: 0 of 125
            Pseudo Genes (frameshifted)       :: 20 of 125
            Pseudo Genes (incomplete)         :: 95 of 125
            Pseudo Genes (internal stop)      :: 22 of 125
            Pseudo Genes (multiple problems)  :: 10 of 125
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3021571
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A77_1"
                     /isolation_source="emergency surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOJ010000001-JBTXOJ010000311
WGS_SCAFLD  NZ_JBTXOJ010000001-NZ_JBTXOJ010000311
//
LOCUS       NZ_JBXGHU010000000   3410528 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Heyndrickxia faecalis strain SL34, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGHU000000000
VERSION     NZ_JBXGHU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772381
            Assembly: GCF_056855535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Heyndrickxia faecalis
  ORGANISM  Heyndrickxia faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Heyndrickxia.
REFERENCE   1  (bases 1 to 3410528)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGHU000000000.1.
            The Heyndrickxia faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JBXGHU000000000.  This version of the
            project (01) has the accession number NZ_JBXGHU010000000, and
            consists of sequences JBXGHU010000001-JBXGHU010000099.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855535.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:57:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,326
            CDSs (total)                      :: 3,235
            Genes (coding)                    :: 3,144
            CDSs (with protein)               :: 3,144
            Genes (RNA)                       :: 91
            rRNAs                             :: 7, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 3, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 37 of 91
            Pseudo Genes (incomplete)         :: 59 of 91
            Pseudo Genes (internal stop)      :: 10 of 91
            Pseudo Genes (multiple problems)  :: 14 of 91
            CRISPR Arrays                     :: 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3410528
                     /organism="Heyndrickxia faecalis"
                     /mol_type="genomic DNA"
                     /strain="SL34"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:2824910"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2023-02-13"
WGS         JBXGHU010000001-JBXGHU010000099
WGS_SCAFLD  NZ_JBXGHU010000001-NZ_JBXGHU010000099
//
LOCUS       NZ_JBSSPG010000000   5321743 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 73b, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSPG000000000
VERSION     NZ_JBSSPG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664925
            Assembly: GCF_056862475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5321743)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSPG000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSPG000000000.  This version of the project
            (01) has the accession number NZ_JBSSPG010000000, and consists of
            sequences JBSSPG010000001-JBSSPG010000114.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.292x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862475.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:12:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,244
            CDSs (total)                      :: 5,139
            Genes (coding)                    :: 4,924
            CDSs (with protein)               :: 4,924
            Genes (RNA)                       :: 105
            rRNAs                             :: 9, 3, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 2, 7 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 215
            CDSs (without protein)            :: 215
            Pseudo Genes (ambiguous residues) :: 0 of 215
            Pseudo Genes (frameshifted)       :: 77 of 215
            Pseudo Genes (incomplete)         :: 151 of 215
            Pseudo Genes (internal stop)      :: 27 of 215
            Pseudo Genes (multiple problems)  :: 38 of 215
            Pseudo Genes (short protein)      :: 1 of 215
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5321743
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="73b"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST624"
WGS         JBSSPG010000001-JBSSPG010000114
WGS_SCAFLD  NZ_JBSSPG010000001-NZ_JBSSPG010000114
//
LOCUS       NZ_JBTXOV010000000   2838215 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecalis strain HO43, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOV000000000
VERSION     NZ_JBTXOV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798554
            Assembly: GCF_056865525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2838215)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOV000000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JBTXOV000000000.  This version of the
            project (01) has the accession number NZ_JBTXOV010000000, and
            consists of sequences JBTXOV010000001-JBTXOV010000036.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865525.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:25:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,810
            CDSs (total)                      :: 2,744
            Genes (coding)                    :: 2,665
            CDSs (with protein)               :: 2,665
            Genes (RNA)                       :: 66
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 31 of 79
            Pseudo Genes (incomplete)         :: 36 of 79
            Pseudo Genes (internal stop)      :: 25 of 79
            Pseudo Genes (multiple problems)  :: 12 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2838215
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="HO43"
                     /isolation_source="outpatient surface"
                     /db_xref="taxon:1351"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2025-06-10"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOV010000001-JBTXOV010000036
WGS_SCAFLD  NZ_JBTXOV010000001-NZ_JBTXOV010000036
//
LOCUS       NZ_JBSSOZ010000000   4975983 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 151a, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSOZ000000000
VERSION     NZ_JBSSOZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664932
            Assembly: GCF_056862185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4975983)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSOZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSOZ000000000.  This version of the project
            (01) has the accession number NZ_JBSSOZ010000000, and consists of
            sequences JBSSOZ010000001-JBSSOZ010000101.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 81.292x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862185.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:52:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,924
            CDSs (total)                      :: 4,817
            Genes (coding)                    :: 4,627
            CDSs (with protein)               :: 4,627
            Genes (RNA)                       :: 107
            rRNAs                             :: 7, 4, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 4, 3, 6 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 190
            CDSs (without protein)            :: 190
            Pseudo Genes (ambiguous residues) :: 0 of 190
            Pseudo Genes (frameshifted)       :: 68 of 190
            Pseudo Genes (incomplete)         :: 130 of 190
            Pseudo Genes (internal stop)      :: 32 of 190
            Pseudo Genes (multiple problems)  :: 36 of 190
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4975983
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="151a"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST162"
WGS         JBSSOZ010000001-JBSSOZ010000101
WGS_SCAFLD  NZ_JBSSOZ010000001-NZ_JBSSOZ010000101
//
LOCUS       NZ_JBTXNP010000000   2768323 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A103_5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXNP000000000
VERSION     NZ_JBTXNP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798587
            Assembly: GCF_056863215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2768323)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXNP000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXNP000000000.  This version of the project
            (01) has the accession number NZ_JBTXNP010000000, and consists of
            sequences JBTXNP010000001-JBTXNP010000173.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863215.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:11:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,775
            CDSs (total)                      :: 2,706
            Genes (coding)                    :: 2,573
            CDSs (with protein)               :: 2,573
            Genes (RNA)                       :: 69
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 42 of 133
            Pseudo Genes (incomplete)         :: 74 of 133
            Pseudo Genes (internal stop)      :: 30 of 133
            Pseudo Genes (multiple problems)  :: 11 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2768323
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A103_5"
                     /isolation_source="outpatient surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2025-03-17"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXNP010000001-JBTXNP010000173
WGS_SCAFLD  NZ_JBTXNP010000001-NZ_JBTXNP010000173
//
LOCUS       NZ_JBVVAE010000000   5877659 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella pasteurii strain JLLY75, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBVVAE000000000
VERSION     NZ_JBVVAE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56043262
            Assembly: GCF_056866375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pasteurii
  ORGANISM  Klebsiella pasteurii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 5877659)
  AUTHORS   Liu,S. and Sun,Y.-Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2026) College of Veterinary Medicine, Qingdao
            Agricultural University, Changcheng Road 700, Qingdao 277000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVVAE000000000.1.
            The Klebsiella pasteurii whole genome shotgun (WGS) project has the
            project accession NZ_JBVVAE000000000.  This version of the project
            (01) has the accession number NZ_JBVVAE010000000, and consists of
            sequences JBVVAE010000001-JBVVAE010000062.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JAN-2026
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056866375.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:02:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,646
            CDSs (total)                      :: 5,537
            Genes (coding)                    :: 5,439
            CDSs (with protein)               :: 5,439
            Genes (RNA)                       :: 109
            rRNAs                             :: 4, 10, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 10, 8 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 98
            CDSs (without protein)            :: 98
            Pseudo Genes (ambiguous residues) :: 0 of 98
            Pseudo Genes (frameshifted)       :: 46 of 98
            Pseudo Genes (incomplete)         :: 67 of 98
            Pseudo Genes (internal stop)      :: 16 of 98
            Pseudo Genes (multiple problems)  :: 25 of 98
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5877659
                     /organism="Klebsiella pasteurii"
                     /mol_type="genomic DNA"
                     /strain="JLLY75"
                     /isolation_source="feces"
                     /host="Sika deer"
                     /db_xref="taxon:2587529"
                     /geo_loc_name="China: Jilin"
                     /lat_lon="43.8868 N 125.3245 E"
                     /collection_date="2024-10"
WGS         JBVVAE010000001-JBVVAE010000062
WGS_SCAFLD  NZ_JBVVAE010000001-NZ_JBVVAE010000062
//
LOCUS       NZ_JBTXNQ010000000   2974888 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A98_8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXNQ000000000
VERSION     NZ_JBTXNQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798586
            Assembly: GCF_056863185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2974888)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXNQ000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXNQ000000000.  This version of the project
            (01) has the accession number NZ_JBTXNQ010000000, and consists of
            sequences JBTXNQ010000001-JBTXNQ010000139.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863185.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:05:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,976
            CDSs (total)                      :: 2,906
            Genes (coding)                    :: 2,788
            CDSs (with protein)               :: 2,788
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 19 of 118
            Pseudo Genes (incomplete)         :: 88 of 118
            Pseudo Genes (internal stop)      :: 22 of 118
            Pseudo Genes (multiple problems)  :: 9 of 118
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2974888
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A98_8"
                     /isolation_source="outpatient surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXNQ010000001-JBTXNQ010000139
WGS_SCAFLD  NZ_JBTXNQ010000001-NZ_JBTXNQ010000139
//
LOCUS       NZ_JBXGHS010000000   2454611 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lentilactobacillus buchneri strain SL36, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGHS000000000
VERSION     NZ_JBXGHS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772383
            Assembly: GCF_056855495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lentilactobacillus buchneri
  ORGANISM  Lentilactobacillus buchneri
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lentilactobacillus.
REFERENCE   1  (bases 1 to 2454611)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGHS000000000.1.
            The Lentilactobacillus buchneri whole genome shotgun (WGS) project
            has the project accession NZ_JBXGHS000000000.  This version of the
            project (01) has the accession number NZ_JBXGHS010000000, and
            consists of sequences JBXGHS010000001-JBXGHS010000037.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855495.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:47:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,402
            CDSs (total)                      :: 2,353
            Genes (coding)                    :: 2,317
            CDSs (with protein)               :: 2,317
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 16 of 36
            Pseudo Genes (incomplete)         :: 16 of 36
            Pseudo Genes (internal stop)      :: 9 of 36
            Pseudo Genes (multiple problems)  :: 5 of 36
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2454611
                     /organism="Lentilactobacillus buchneri"
                     /mol_type="genomic DNA"
                     /strain="SL36"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:1581"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2023-02-13"
WGS         JBXGHS010000001-JBXGHS010000037
WGS_SCAFLD  NZ_JBXGHS010000001-NZ_JBXGHS010000037
//
LOCUS       NZ_JAKDDV010000000   5211542 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain ECO10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAKDDV000000000
VERSION     NZ_JAKDDV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN24046104
            Assembly: GCF_056859235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5211542)
  AUTHORS   Kim,Y.-J., Kim,S. and Bae,S.
  TITLE     Genomic Analysis of Plasmid IncF-Mediated Co-resistance in
            Escherichia coli Isolated From Humans and Animals
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5211542)
  AUTHORS   Kim,Y.-J., Kim,S. and Bae,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JAN-2022) Division of Antimicrobial Resistance
            Research, Korea National Institute of Health, 187 Osongsaengmyeong
            2-ro, Chungju-si, Chungcheongbuk-do 28159, South Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKDDV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JAKDDV000000000.  This version of the project
            (01) has the accession number NZ_JAKDDV010000000, and consists of
            sequences JAKDDV010000001-JAKDDV010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. 3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 330x
            Sequencing Technology  :: PacBio RSII
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859235.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:32:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,189
            CDSs (total)                      :: 5,073
            Genes (coding)                    :: 4,812
            CDSs (with protein)               :: 4,812
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 261
            CDSs (without protein)            :: 261
            Pseudo Genes (ambiguous residues) :: 0 of 261
            Pseudo Genes (frameshifted)       :: 108 of 261
            Pseudo Genes (incomplete)         :: 178 of 261
            Pseudo Genes (internal stop)      :: 37 of 261
            Pseudo Genes (multiple problems)  :: 53 of 261
            Pseudo Genes (short protein)      :: 1 of 261
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5211542
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="ECO10"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="South Korea: Seoul"
                     /collection_date="2017-01"
WGS         JAKDDV010000001-JAKDDV010000004
WGS_SCAFLD  NZ_JAKDDV010000001-NZ_JAKDDV010000004
//
LOCUS       NZ_JBTXOZ010000000   3120075 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecalis strain HO39, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOZ000000000
VERSION     NZ_JBTXOZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798550
            Assembly: GCF_056865675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 3120075)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOZ000000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JBTXOZ000000000.  This version of the
            project (01) has the accession number NZ_JBTXOZ010000000, and
            consists of sequences JBTXOZ010000001-JBTXOZ010000085.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865675.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:52:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,117
            CDSs (total)                      :: 3,043
            Genes (coding)                    :: 2,972
            CDSs (with protein)               :: 2,972
            Genes (RNA)                       :: 74
            rRNAs                             :: 3, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2, 4 (5S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 18 of 71
            Pseudo Genes (incomplete)         :: 52 of 71
            Pseudo Genes (internal stop)      :: 6 of 71
            Pseudo Genes (multiple problems)  :: 4 of 71
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3120075
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="HO39"
                     /isolation_source="emergency surface"
                     /db_xref="taxon:1351"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2025-06-10"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOZ010000001-JBTXOZ010000085
WGS_SCAFLD  NZ_JBTXOZ010000001-NZ_JBTXOZ010000085
//
LOCUS       NZ_JBXGHT010000000   3375927 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Heyndrickxia faecalis strain SL35, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGHT000000000
VERSION     NZ_JBXGHT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772382
            Assembly: GCF_056855515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Heyndrickxia faecalis
  ORGANISM  Heyndrickxia faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Heyndrickxia.
REFERENCE   1  (bases 1 to 3375927)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGHT000000000.1.
            The Heyndrickxia faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JBXGHT000000000.  This version of the
            project (01) has the accession number NZ_JBXGHT010000000, and
            consists of sequences JBXGHT010000001-JBXGHT010000103.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855515.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:49:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,260
            CDSs (total)                      :: 3,177
            Genes (coding)                    :: 3,093
            CDSs (with protein)               :: 3,093
            Genes (RNA)                       :: 83
            rRNAs                             :: 9, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 5, 1, 3 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 84
            CDSs (without protein)            :: 84
            Pseudo Genes (ambiguous residues) :: 0 of 84
            Pseudo Genes (frameshifted)       :: 25 of 84
            Pseudo Genes (incomplete)         :: 66 of 84
            Pseudo Genes (internal stop)      :: 8 of 84
            Pseudo Genes (multiple problems)  :: 13 of 84
            CRISPR Arrays                     :: 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3375927
                     /organism="Heyndrickxia faecalis"
                     /mol_type="genomic DNA"
                     /strain="SL35"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:2824910"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2023-02-13"
WGS         JBXGHT010000001-JBXGHT010000103
WGS_SCAFLD  NZ_JBXGHT010000001-NZ_JBXGHT010000103
//
LOCUS       NZ_JBSSOP010000000   4979741 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 192c, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSOP000000000
VERSION     NZ_JBSSOP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664942
            Assembly: GCF_056861785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4979741)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSOP000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSOP000000000.  This version of the project
            (01) has the accession number NZ_JBSSOP010000000, and consists of
            sequences JBSSOP010000001-JBSSOP010000104.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 90.025x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861785.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:53:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,929
            CDSs (total)                      :: 4,822
            Genes (coding)                    :: 4,630
            CDSs (with protein)               :: 4,630
            Genes (RNA)                       :: 107
            rRNAs                             :: 7, 4, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 4, 3, 6 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 192
            CDSs (without protein)            :: 192
            Pseudo Genes (ambiguous residues) :: 0 of 192
            Pseudo Genes (frameshifted)       :: 69 of 192
            Pseudo Genes (incomplete)         :: 131 of 192
            Pseudo Genes (internal stop)      :: 33 of 192
            Pseudo Genes (multiple problems)  :: 36 of 192
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4979741
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="192c"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST162"
WGS         JBSSOP010000001-JBSSOP010000104
WGS_SCAFLD  NZ_JBSSOP010000001-NZ_JBSSOP010000104
//
LOCUS       NZ_JBTXOC010000000   2980686 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A83_1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOC000000000
VERSION     NZ_JBTXOC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798574
            Assembly: GCF_056864855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2980686)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOC000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXOC000000000.  This version of the project
            (01) has the accession number NZ_JBTXOC010000000, and consists of
            sequences JBTXOC010000001-JBTXOC010000147.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864855.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:23:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,982
            CDSs (total)                      :: 2,912
            Genes (coding)                    :: 2,795
            CDSs (with protein)               :: 2,795
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 19 of 117
            Pseudo Genes (incomplete)         :: 87 of 117
            Pseudo Genes (internal stop)      :: 22 of 117
            Pseudo Genes (multiple problems)  :: 9 of 117
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2980686
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A83_1"
                     /isolation_source="outpatient air"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOC010000001-JBTXOC010000147
WGS_SCAFLD  NZ_JBTXOC010000001-NZ_JBTXOC010000147
//
LOCUS       NZ_JBVVAH010000000   5878048 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella pasteurii strain JLLY5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBVVAH000000000
VERSION     NZ_JBVVAH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56043257
            Assembly: GCF_056866485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pasteurii
  ORGANISM  Klebsiella pasteurii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 5878048)
  AUTHORS   Liu,S. and Sun,Y.-Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2026) College of Veterinary Medicine, Qingdao
            Agricultural University, Changcheng Road 700, Qingdao 277000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVVAH000000000.1.
            The Klebsiella pasteurii whole genome shotgun (WGS) project has the
            project accession NZ_JBVVAH000000000.  This version of the project
            (01) has the accession number NZ_JBVVAH010000000, and consists of
            sequences JBVVAH010000001-JBVVAH010000062.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JAN-2026
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056866485.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:02:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,645
            CDSs (total)                      :: 5,537
            Genes (coding)                    :: 5,438
            CDSs (with protein)               :: 5,438
            Genes (RNA)                       :: 108
            rRNAs                             :: 4, 10, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 10, 7 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 99
            CDSs (without protein)            :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 46 of 99
            Pseudo Genes (incomplete)         :: 68 of 99
            Pseudo Genes (internal stop)      :: 16 of 99
            Pseudo Genes (multiple problems)  :: 25 of 99
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5878048
                     /organism="Klebsiella pasteurii"
                     /mol_type="genomic DNA"
                     /strain="JLLY5"
                     /isolation_source="feces"
                     /host="Sika deer"
                     /db_xref="taxon:2587529"
                     /geo_loc_name="China: Jilin"
                     /lat_lon="43.8868 N 125.3245 E"
                     /collection_date="2024-10"
WGS         JBVVAH010000001-JBVVAH010000062
WGS_SCAFLD  NZ_JBVVAH010000001-NZ_JBVVAH010000062
//
LOCUS       NZ_JBTXPE010000000   3086558 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecalis strain HO34, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXPE000000000
VERSION     NZ_JBTXPE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798545
            Assembly: GCF_056865815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 3086558)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXPE000000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JBTXPE000000000.  This version of the
            project (01) has the accession number NZ_JBTXPE010000000, and
            consists of sequences JBTXPE010000001-JBTXPE010000081.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865815.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:49:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,068
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,926
            CDSs (with protein)               :: 2,926
            Genes (RNA)                       :: 66
            rRNAs                             :: 3, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 1 (5S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 19 of 76
            Pseudo Genes (incomplete)         :: 55 of 76
            Pseudo Genes (internal stop)      :: 7 of 76
            Pseudo Genes (multiple problems)  :: 4 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3086558
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="HO34"
                     /isolation_source="emergency surface"
                     /db_xref="taxon:1351"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2025-06-10"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXPE010000001-JBTXPE010000081
WGS_SCAFLD  NZ_JBTXPE010000001-NZ_JBTXPE010000081
//
LOCUS       NZ_JBSSOM010000000   5195700 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 195a, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSOM000000000
VERSION     NZ_JBSSOM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664945
            Assembly: GCF_056861705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5195700)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSOM000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSOM000000000.  This version of the project
            (01) has the accession number NZ_JBSSOM010000000, and consists of
            sequences JBSSOM010000001-JBSSOM010000137.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 121.318x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861705.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:59:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,202
            CDSs (total)                      :: 5,088
            Genes (coding)                    :: 4,896
            CDSs (with protein)               :: 4,896
            Genes (RNA)                       :: 114
            rRNAs                             :: 9, 4, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 6, 3, 9 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 192
            CDSs (without protein)            :: 192
            Pseudo Genes (ambiguous residues) :: 0 of 192
            Pseudo Genes (frameshifted)       :: 66 of 192
            Pseudo Genes (incomplete)         :: 130 of 192
            Pseudo Genes (internal stop)      :: 33 of 192
            Pseudo Genes (multiple problems)  :: 32 of 192
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5195700
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="195a"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST212"
WGS         JBSSOM010000001-JBSSOM010000137
WGS_SCAFLD  NZ_JBSSOM010000001-NZ_JBSSOM010000137
//
LOCUS       NZ_JBXEPO010000000   2968966 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecalis strain PAK6AS, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXEPO000000000
VERSION     NZ_JBXEPO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54275484
            Assembly: GCF_056858115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2968966)
  AUTHORS   Brenciani,A.
  TITLE     optrA-carrying enterococci recovered from soil and river sediments
            of the K2 region, Pakistan
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2968966)
  AUTHORS   Brenciani,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-DEC-2025) Unit of Microbiology, Department of
            Biomedical Sciences & Public Health, Polytechnic University of
            Marche Medical School, Tronto 10/A, Ancona 60126, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEPO000000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JBXEPO000000000.  This version of the
            project (01) has the accession number NZ_JBXEPO010000000, and
            consists of sequences JBXEPO010000001-JBXEPO010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Complete Genomics
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858115.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:41:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,893
            CDSs (total)                      :: 2,816
            Genes (coding)                    :: 2,759
            CDSs (with protein)               :: 2,759
            Genes (RNA)                       :: 77
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 21 of 57
            Pseudo Genes (incomplete)         :: 27 of 57
            Pseudo Genes (internal stop)      :: 14 of 57
            Pseudo Genes (multiple problems)  :: 5 of 57
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2968966
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="PAK6AS"
                     /isolation_source="soil"
                     /db_xref="taxon:1351"
                     /geo_loc_name="Pakistan"
                     /collection_date="2024"
                     /collected_by="Department of Life and Environmental
                     Sciences, Polytechnic University of Marche, Ancona"
WGS         JBXEPO010000001-JBXEPO010000004
WGS_SCAFLD  NZ_CM166487
WGS_SCAFLD  NZ_JBXEPO010000002-NZ_JBXEPO010000004
//
LOCUS       NZ_JBXEQJ010000000   3293611 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Laceyella sacchari strain IIPT1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXEQJ000000000
VERSION     NZ_JBXEQJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53233919
            Assembly: GCF_056857115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Laceyella sacchari
  ORGANISM  Laceyella sacchari
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Thermoactinomycetaceae; Laceyella.
REFERENCE   1  (bases 1 to 3293611)
  AUTHORS   Patel,P., Dasgupta,D. and Ray,A.
  TITLE     WGS of Laceyella sacchari IIPT1
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3293611)
  AUTHORS   Patel,P., Dasgupta,D. and Ray,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-NOV-2025) Biotechnology conversion Area (Biofuels
            Division), CSIR-Indian Institute of Petroleum, Indian Institute of
            Petroleum, Dehradun, Uttarakhand 248005, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEQJ000000000.1.
            The Laceyella sacchari whole genome shotgun (WGS) project has the
            project accession NZ_JBXEQJ000000000.  This version of the project
            (01) has the accession number NZ_JBXEQJ010000000, and consists of
            sequences JBXEQJ010000001-JBXEQJ010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from CSIR-Indian Instiute of
            Petroleum.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: SEP-2025
            Assembly Method        :: Unicycler v. 0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 98.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857115.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:10:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,257
            CDSs (total)                      :: 3,176
            Genes (coding)                    :: 3,135
            CDSs (with protein)               :: 3,135
            Genes (RNA)                       :: 81
            rRNAs                             :: 5, 1 (5S, 16S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            tRNAs                             :: 71
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 41
            CDSs (without protein)            :: 41
            Pseudo Genes (ambiguous residues) :: 0 of 41
            Pseudo Genes (frameshifted)       :: 13 of 41
            Pseudo Genes (incomplete)         :: 28 of 41
            Pseudo Genes (internal stop)      :: 5 of 41
            Pseudo Genes (multiple problems)  :: 4 of 41
            CRISPR Arrays                     :: 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3293611
                     /organism="Laceyella sacchari"
                     /mol_type="genomic DNA"
                     /strain="IIPT1"
                     /isolation_source="rhizosphere"
                     /host="Litchi"
                     /db_xref="taxon:37482"
                     /geo_loc_name="India: Dehradun"
                     /lat_lon="30.27159729 N 78.07821710 E"
                     /collection_date="2021-07"
                     /collected_by="Patel Pratima Ashok"
WGS         JBXEQJ010000001-JBXEQJ010000002
WGS_SCAFLD  NZ_JBXEQJ010000001-NZ_JBXEQJ010000002
//
LOCUS       NZ_JBTXOB010000000   2980408 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A83_2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOB000000000
VERSION     NZ_JBTXOB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798575
            Assembly: GCF_056864805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2980408)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOB000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXOB000000000.  This version of the project
            (01) has the accession number NZ_JBTXOB010000000, and consists of
            sequences JBTXOB010000001-JBTXOB010000148.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864805.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:31:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,978
            CDSs (total)                      :: 2,908
            Genes (coding)                    :: 2,795
            CDSs (with protein)               :: 2,795
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 113
            CDSs (without protein)            :: 113
            Pseudo Genes (ambiguous residues) :: 0 of 113
            Pseudo Genes (frameshifted)       :: 19 of 113
            Pseudo Genes (incomplete)         :: 83 of 113
            Pseudo Genes (internal stop)      :: 22 of 113
            Pseudo Genes (multiple problems)  :: 9 of 113
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2980408
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A83_2"
                     /isolation_source="outpatient air"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOB010000001-JBTXOB010000148
WGS_SCAFLD  NZ_JBTXOB010000001-NZ_JBTXOB010000148
//
LOCUS       NZ_JBSSPB010000000   5202119 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 113c, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSPB000000000
VERSION     NZ_JBSSPB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664930
            Assembly: GCF_056862295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5202119)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSPB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSPB000000000.  This version of the project
            (01) has the accession number NZ_JBSSPB010000000, and consists of
            sequences JBSSPB010000001-JBSSPB010000133.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 87.22x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862295.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:57:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,193
            CDSs (total)                      :: 5,076
            Genes (coding)                    :: 4,885
            CDSs (with protein)               :: 4,885
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 5, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 6, 4, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 191
            CDSs (without protein)            :: 191
            Pseudo Genes (ambiguous residues) :: 0 of 191
            Pseudo Genes (frameshifted)       :: 71 of 191
            Pseudo Genes (incomplete)         :: 132 of 191
            Pseudo Genes (internal stop)      :: 24 of 191
            Pseudo Genes (multiple problems)  :: 32 of 191
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5202119
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="113c"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST224"
WGS         JBSSPB010000001-JBSSPB010000133
WGS_SCAFLD  NZ_JBSSPB010000001-NZ_JBSSPB010000133
//
LOCUS       NZ_JBXGIB010000000   2357344 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Levilactobacillus brevis strain SL28, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGIB000000000
VERSION     NZ_JBXGIB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772374
            Assembly: GCF_056855695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Levilactobacillus brevis
  ORGANISM  Levilactobacillus brevis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
REFERENCE   1  (bases 1 to 2357344)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGIB000000000.1.
            The Levilactobacillus brevis whole genome shotgun (WGS) project has
            the project accession NZ_JBXGIB000000000.  This version of the
            project (01) has the accession number NZ_JBXGIB010000000, and
            consists of sequences JBXGIB010000001-JBXGIB010000030.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855695.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:44:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,356
            CDSs (total)                      :: 2,292
            Genes (coding)                    :: 2,269
            CDSs (with protein)               :: 2,269
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 23
            CDSs (without protein)            :: 23
            Pseudo Genes (ambiguous residues) :: 0 of 23
            Pseudo Genes (frameshifted)       :: 12 of 23
            Pseudo Genes (incomplete)         :: 8 of 23
            Pseudo Genes (internal stop)      :: 9 of 23
            Pseudo Genes (multiple problems)  :: 6 of 23
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2357344
                     /organism="Levilactobacillus brevis"
                     /mol_type="genomic DNA"
                     /strain="SL28"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:1580"
                     /geo_loc_name="USA: Hillsboro"
                     /lat_lon="47.40 N 97.06 W"
                     /collection_date="2022-08-18"
WGS         JBXGIB010000001-JBXGIB010000030
WGS_SCAFLD  NZ_JBXGIB010000001-NZ_JBXGIB010000030
//
LOCUS       NZ_JBTXPB010000000   3123218 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecalis strain HO37, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXPB000000000
VERSION     NZ_JBTXPB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798548
            Assembly: GCF_056865735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 3123218)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXPB000000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JBTXPB000000000.  This version of the
            project (01) has the accession number NZ_JBTXPB010000000, and
            consists of sequences JBTXPB010000001-JBTXPB010000083.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865735.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:36:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,120
            CDSs (total)                      :: 3,046
            Genes (coding)                    :: 2,977
            CDSs (with protein)               :: 2,977
            Genes (RNA)                       :: 74
            rRNAs                             :: 3, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2, 4 (5S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 18 of 69
            Pseudo Genes (incomplete)         :: 50 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 4 of 69
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3123218
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="HO37"
                     /isolation_source="emergency surface"
                     /db_xref="taxon:1351"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2025-06-10"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXPB010000001-JBTXPB010000083
WGS_SCAFLD  NZ_JBTXPB010000001-NZ_JBTXPB010000083
//
LOCUS       NZ_JBTXNI010000000   2766582 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A115_1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXNI000000000
VERSION     NZ_JBTXNI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798594
            Assembly: GCF_056862935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2766582)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXNI000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXNI000000000.  This version of the project
            (01) has the accession number NZ_JBTXNI010000000, and consists of
            sequences JBTXNI010000001-JBTXNI010000169.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862935.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:59:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,780
            CDSs (total)                      :: 2,715
            Genes (coding)                    :: 2,581
            CDSs (with protein)               :: 2,581
            Genes (RNA)                       :: 65
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 134
            CDSs (without protein)            :: 134
            Pseudo Genes (ambiguous residues) :: 0 of 134
            Pseudo Genes (frameshifted)       :: 42 of 134
            Pseudo Genes (incomplete)         :: 75 of 134
            Pseudo Genes (internal stop)      :: 30 of 134
            Pseudo Genes (multiple problems)  :: 11 of 134
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2766582
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A115_1"
                     /isolation_source="outpatient surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2025-03-17"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXNI010000001-JBTXNI010000169
WGS_SCAFLD  NZ_JBTXNI010000001-NZ_JBTXNI010000169
//
LOCUS       NZ_JBTXNN010000000   2773766 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A104_2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXNN000000000
VERSION     NZ_JBTXNN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798589
            Assembly: GCF_056863095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2773766)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXNN000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXNN000000000.  This version of the project
            (01) has the accession number NZ_JBTXNN010000000, and consists of
            sequences JBTXNN010000001-JBTXNN010000190.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863095.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:02:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,804
            CDSs (total)                      :: 2,735
            Genes (coding)                    :: 2,584
            CDSs (with protein)               :: 2,584
            Genes (RNA)                       :: 69
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 151
            CDSs (without protein)            :: 151
            Pseudo Genes (ambiguous residues) :: 0 of 151
            Pseudo Genes (frameshifted)       :: 42 of 151
            Pseudo Genes (incomplete)         :: 93 of 151
            Pseudo Genes (internal stop)      :: 31 of 151
            Pseudo Genes (multiple problems)  :: 13 of 151
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2773766
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A104_2"
                     /isolation_source="outpatient surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2025-03-17"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXNN010000001-JBTXNN010000190
WGS_SCAFLD  NZ_JBTXNN010000001-NZ_JBTXNN010000190
//
LOCUS       NZ_JBTXNU010000000   2980260 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A90_3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXNU000000000
VERSION     NZ_JBTXNU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798582
            Assembly: GCF_056864545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2980260)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXNU000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXNU000000000.  This version of the project
            (01) has the accession number NZ_JBTXNU010000000, and consists of
            sequences JBTXNU010000001-JBTXNU010000150.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864545.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:23:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,979
            CDSs (total)                      :: 2,909
            Genes (coding)                    :: 2,794
            CDSs (with protein)               :: 2,794
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 19 of 115
            Pseudo Genes (incomplete)         :: 85 of 115
            Pseudo Genes (internal stop)      :: 22 of 115
            Pseudo Genes (multiple problems)  :: 9 of 115
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2980260
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A90_3"
                     /isolation_source="emergency surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXNU010000001-JBTXNU010000150
WGS_SCAFLD  NZ_JBTXNU010000001-NZ_JBTXNU010000150
//
LOCUS       NZ_JBWAYW010000000   4905460 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain LL_9, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWAYW000000000
VERSION     NZ_JBWAYW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56449256
            Assembly: GCF_056863835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4905460)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Clinical laboratory, The Second Affiliated
            Hospital Zhejiang University of Medicine, No. 88, Jiefang Road,
            Hangzhou, Zhejiang 310009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWAYW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBWAYW000000000.  This version of the project
            (01) has the accession number NZ_JBWAYW010000000, and consists of
            sequences JBWAYW010000001-JBWAYW010000205.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863835.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:34:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,886
            CDSs (total)                      :: 4,792
            Genes (coding)                    :: 4,558
            CDSs (with protein)               :: 4,558
            Genes (RNA)                       :: 94
            rRNAs                             :: 2, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 234
            CDSs (without protein)            :: 234
            Pseudo Genes (ambiguous residues) :: 0 of 234
            Pseudo Genes (frameshifted)       :: 60 of 234
            Pseudo Genes (incomplete)         :: 162 of 234
            Pseudo Genes (internal stop)      :: 41 of 234
            Pseudo Genes (multiple problems)  :: 25 of 234
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4905460
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="LL_9"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Yunnan"
                     /collection_date="2025-12-05"
WGS         JBWAYW010000001-JBWAYW010000205
WGS_SCAFLD  NZ_JBWAYW010000001-NZ_JBWAYW010000205
//
LOCUS       NZ_JBSXNP010000000   3477915 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Jannaschia sp. L-14R, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXNP000000000
VERSION     NZ_JBSXNP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312071
            Assembly: GCF_056857695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Jannaschia sp. L-14R
  ORGANISM  Jannaschia sp. L-14R
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Jannaschia.
REFERENCE   1  (bases 1 to 3477915)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXNP000000000.1.
            The Jannaschia sp. L-14R whole genome shotgun (WGS) project has the
            project accession NZ_JBSXNP000000000.  This version of the project
            (01) has the accession number NZ_JBSXNP010000000, and consists of
            sequences JBSXNP010000001-JBSXNP010000011.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 360.99x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857695.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:12:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,515
            CDSs (total)                      :: 3,466
            Genes (coding)                    :: 3,413
            CDSs (with protein)               :: 3,413
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 14 of 53
            Pseudo Genes (incomplete)         :: 51 of 53
            Pseudo Genes (internal stop)      :: 9 of 53
            Pseudo Genes (multiple problems)  :: 18 of 53
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3477915
                     /organism="Jannaschia sp. L-14R"
                     /mol_type="genomic DNA"
                     /strain="L-14R"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472690"
                     /geo_loc_name="Indian Ocean: Southwestern Indian Ridge"
                     /lat_lon="37.93805 S 49.26156 E"
                     /collection_date="2024-05"
WGS         JBSXNP010000001-JBSXNP010000011
WGS_SCAFLD  NZ_JBSXNP010000001-NZ_JBSXNP010000011
//
LOCUS       NZ_JBTXNY010000000   2980151 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A85_3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXNY000000000
VERSION     NZ_JBTXNY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798578
            Assembly: GCF_056864675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2980151)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXNY000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXNY000000000.  This version of the project
            (01) has the accession number NZ_JBTXNY010000000, and consists of
            sequences JBTXNY010000001-JBTXNY010000139.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 6x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864675.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:31:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,983
            CDSs (total)                      :: 2,913
            Genes (coding)                    :: 2,799
            CDSs (with protein)               :: 2,799
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 114
            CDSs (without protein)            :: 114
            Pseudo Genes (ambiguous residues) :: 0 of 114
            Pseudo Genes (frameshifted)       :: 19 of 114
            Pseudo Genes (incomplete)         :: 84 of 114
            Pseudo Genes (internal stop)      :: 22 of 114
            Pseudo Genes (multiple problems)  :: 9 of 114
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2980151
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A85_3"
                     /isolation_source="outpatient surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXNY010000001-JBTXNY010000139
WGS_SCAFLD  NZ_JBTXNY010000001-NZ_JBTXNY010000139
//
LOCUS       NZ_JBVUZV010000000   5550265 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella variicola strain LNTD16, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBVUZV000000000
VERSION     NZ_JBVUZV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56043282
            Assembly: GCF_056866065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella variicola
  ORGANISM  Klebsiella variicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5550265)
  AUTHORS   Liu,S. and Sun,Y.-Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2026) College of Veterinary Medicine, Qingdao
            Agricultural University, Changcheng Road 700, Qingdao 277000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVUZV000000000.1.
            The Klebsiella variicola whole genome shotgun (WGS) project has the
            project accession NZ_JBVUZV000000000.  This version of the project
            (01) has the accession number NZ_JBVUZV010000000, and consists of
            sequences JBVUZV010000001-JBVUZV010000049.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JAN-2026
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056866065.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:00:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,435
            CDSs (total)                      :: 5,318
            Genes (coding)                    :: 5,181
            CDSs (with protein)               :: 5,181
            Genes (RNA)                       :: 117
            rRNAs                             :: 12, 7, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 10, 7, 10 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 137
            CDSs (without protein)            :: 137
            Pseudo Genes (ambiguous residues) :: 0 of 137
            Pseudo Genes (frameshifted)       :: 49 of 137
            Pseudo Genes (incomplete)         :: 84 of 137
            Pseudo Genes (internal stop)      :: 30 of 137
            Pseudo Genes (multiple problems)  :: 20 of 137
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5550265
                     /organism="Klebsiella variicola"
                     /mol_type="genomic DNA"
                     /strain="LNTD16"
                     /isolation_source="feces"
                     /host="Sika deer"
                     /db_xref="taxon:244366"
                     /geo_loc_name="China: Liaoning"
                     /lat_lon="41.8057 N 123.4315 E"
                     /collection_date="2024-09"
WGS         JBVUZV010000001-JBVUZV010000049
WGS_SCAFLD  NZ_JBVUZV010000001-NZ_JBVUZV010000049
//
LOCUS       NZ_JBWXHB010000000   5110660 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain TZ_20_4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWXHB000000000
VERSION     NZ_JBWXHB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN57131688
            Assembly: GCF_056863615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5110660)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-APR-2026) Clinical laboratory, The Second Affiliated
            Hospital Zhejiang University of Medicine, No. 88, Jiefang Road,
            Hangzhou, Zhejiang 310009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWXHB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBWXHB000000000.  This version of the project
            (01) has the accession number NZ_JBWXHB010000000, and consists of
            sequences JBWXHB010000001-JBWXHB010000257.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 07-APR-2026
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863615.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:44:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,211
            CDSs (total)                      :: 5,124
            Genes (coding)                    :: 4,846
            CDSs (with protein)               :: 4,846
            Genes (RNA)                       :: 87
            rRNAs                             :: 3, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 278
            CDSs (without protein)            :: 278
            Pseudo Genes (ambiguous residues) :: 0 of 278
            Pseudo Genes (frameshifted)       :: 79 of 278
            Pseudo Genes (incomplete)         :: 199 of 278
            Pseudo Genes (internal stop)      :: 58 of 278
            Pseudo Genes (multiple problems)  :: 51 of 278
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5110660
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="TZ_20_4"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Zhejiang"
                     /collection_date="2020-10-27"
WGS         JBWXHB010000001-JBWXHB010000257
WGS_SCAFLD  NZ_JBWXHB010000001-NZ_JBWXHB010000257
//
LOCUS       NZ_JBTXOP010000000   2488117 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A50_7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOP000000000
VERSION     NZ_JBTXOP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798560
            Assembly: GCF_056865335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2488117)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOP000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXOP000000000.  This version of the project
            (01) has the accession number NZ_JBTXOP010000000, and consists of
            sequences JBTXOP010000001-JBTXOP010000225.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865335.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:38:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,489
            CDSs (total)                      :: 2,422
            Genes (coding)                    :: 2,259
            CDSs (with protein)               :: 2,259
            Genes (RNA)                       :: 67
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 163
            CDSs (without protein)            :: 163
            Pseudo Genes (ambiguous residues) :: 0 of 163
            Pseudo Genes (frameshifted)       :: 43 of 163
            Pseudo Genes (incomplete)         :: 106 of 163
            Pseudo Genes (internal stop)      :: 36 of 163
            Pseudo Genes (multiple problems)  :: 17 of 163
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2488117
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A50_7"
                     /isolation_source="emergency surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOP010000001-JBTXOP010000225
WGS_SCAFLD  NZ_JBTXOP010000001-NZ_JBTXOP010000225
//
LOCUS       NZ_JBXGJX010000000   3035716 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lactiplantibacillus plantarum strain Pm001, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGJX000000000
VERSION     NZ_JBXGJX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56553707
            Assembly: GCF_056858315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactiplantibacillus plantarum
  ORGANISM  Lactiplantibacillus plantarum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactiplantibacillus.
REFERENCE   1  (bases 1 to 3035716)
  AUTHORS   Liu,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAR-2026) school of medicine, Zhejiang university,
            268 Kaixuan Road, Hangzhou, Zhejiang 310029, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGJX000000000.1.
            The Lactiplantibacillus plantarum whole genome shotgun (WGS)
            project has the project accession NZ_JBXGJX000000000.  This version
            of the project (01) has the accession number NZ_JBXGJX010000000,
            and consists of sequence JBXGJX010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Institute of Translational
            Medicine, Zhejiang University School of Medicine.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: ABySS v. FEB-2022
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858315.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:25:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,807
            Genes (coding)                    :: 2,768
            CDSs (with protein)               :: 2,768
            Genes (RNA)                       :: 91
            rRNAs                             :: 6, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 16 of 39
            Pseudo Genes (incomplete)         :: 18 of 39
            Pseudo Genes (internal stop)      :: 8 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3035716
                     /organism="Lactiplantibacillus plantarum"
                     /mol_type="genomic DNA"
                     /strain="Pm001"
                     /isolation_source="Healthy human feces"
                     /db_xref="taxon:1590"
                     /geo_loc_name="China: Hangzhou"
                     /collection_date="2022-02"
WGS         JBXGJX010000001
WGS_SCAFLD  NZ_CM166494
//
LOCUS       NZ_JBTXNR010000000   2979106 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A98_4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXNR000000000
VERSION     NZ_JBTXNR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798585
            Assembly: GCF_056864435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2979106)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXNR000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXNR000000000.  This version of the project
            (01) has the accession number NZ_JBTXNR010000000, and consists of
            sequences JBTXNR010000001-JBTXNR010000149.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864435.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:21:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,982
            CDSs (total)                      :: 2,912
            Genes (coding)                    :: 2,791
            CDSs (with protein)               :: 2,791
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 121
            Pseudo Genes (ambiguous residues) :: 0 of 121
            Pseudo Genes (frameshifted)       :: 19 of 121
            Pseudo Genes (incomplete)         :: 91 of 121
            Pseudo Genes (internal stop)      :: 22 of 121
            Pseudo Genes (multiple problems)  :: 9 of 121
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2979106
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A98_4"
                     /isolation_source="outpatient surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXNR010000001-JBTXNR010000149
WGS_SCAFLD  NZ_JBTXNR010000001-NZ_JBTXNR010000149
//
LOCUS       NZ_JBXGIC010000000   3255023 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lactiplantibacillus plantarum strain SL27, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGIC000000000
VERSION     NZ_JBXGIC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772373
            Assembly: GCF_056855655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactiplantibacillus plantarum
  ORGANISM  Lactiplantibacillus plantarum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactiplantibacillus.
REFERENCE   1  (bases 1 to 3255023)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGIC000000000.1.
            The Lactiplantibacillus plantarum whole genome shotgun (WGS)
            project has the project accession NZ_JBXGIC000000000.  This version
            of the project (01) has the accession number NZ_JBXGIC010000000,
            and consists of sequences JBXGIC010000001-JBXGIC010000028.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855655.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:46:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,071
            CDSs (total)                      :: 3,009
            Genes (coding)                    :: 2,984
            CDSs (with protein)               :: 2,984
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 25
            CDSs (without protein)            :: 25
            Pseudo Genes (ambiguous residues) :: 0 of 25
            Pseudo Genes (frameshifted)       :: 11 of 25
            Pseudo Genes (incomplete)         :: 9 of 25
            Pseudo Genes (internal stop)      :: 9 of 25
            Pseudo Genes (multiple problems)  :: 4 of 25
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3255023
                     /organism="Lactiplantibacillus plantarum"
                     /mol_type="genomic DNA"
                     /strain="SL27"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:1590"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2023-02-13"
WGS         JBXGIC010000001-JBXGIC010000028
WGS_SCAFLD  NZ_JBXGIC010000001-NZ_JBXGIC010000028
//
LOCUS       NZ_JBWAYS010000000   5156322 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain LL_93, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWAYS000000000
VERSION     NZ_JBWAYS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56449261
            Assembly: GCF_056863755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5156322)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Clinical laboratory, The Second Affiliated
            Hospital Zhejiang University of Medicine, No. 88, Jiefang Road,
            Hangzhou, Zhejiang 310009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWAYS000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBWAYS000000000.  This version of the project
            (01) has the accession number NZ_JBWAYS010000000, and consists of
            sequences JBWAYS010000001-JBWAYS010000109.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863755.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:51:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,103
            CDSs (total)                      :: 5,023
            Genes (coding)                    :: 4,765
            CDSs (with protein)               :: 4,765
            Genes (RNA)                       :: 80
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 69
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 258
            CDSs (without protein)            :: 258
            Pseudo Genes (ambiguous residues) :: 0 of 258
            Pseudo Genes (frameshifted)       :: 94 of 258
            Pseudo Genes (incomplete)         :: 162 of 258
            Pseudo Genes (internal stop)      :: 55 of 258
            Pseudo Genes (multiple problems)  :: 45 of 258
            Pseudo Genes (short protein)      :: 1 of 258
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5156322
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="LL_93"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Yunnan"
                     /collection_date="2025-12-05"
WGS         JBWAYS010000001-JBWAYS010000109
WGS_SCAFLD  NZ_JBWAYS010000001-NZ_JBWAYS010000109
//
LOCUS       NZ_JBTXNL010000000   2764394 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A110_5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXNL000000000
VERSION     NZ_JBTXNL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798591
            Assembly: GCF_056863045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2764394)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXNL000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXNL000000000.  This version of the project
            (01) has the accession number NZ_JBTXNL010000000, and consists of
            sequences JBTXNL010000001-JBTXNL010000158.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863045.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:55:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,763
            CDSs (total)                      :: 2,694
            Genes (coding)                    :: 2,560
            CDSs (with protein)               :: 2,560
            Genes (RNA)                       :: 69
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 134
            CDSs (without protein)            :: 134
            Pseudo Genes (ambiguous residues) :: 0 of 134
            Pseudo Genes (frameshifted)       :: 42 of 134
            Pseudo Genes (incomplete)         :: 75 of 134
            Pseudo Genes (internal stop)      :: 30 of 134
            Pseudo Genes (multiple problems)  :: 11 of 134
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2764394
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A110_5"
                     /isolation_source="outpatient surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2025-03-17"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXNL010000001-JBTXNL010000158
WGS_SCAFLD  NZ_JBTXNL010000001-NZ_JBTXNL010000158
//
LOCUS       NZ_JBWEEU010000000   1948412 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Limosilactobacillus reuteri strain MG5463, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWEEU000000000
VERSION     NZ_JBWEEU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56535193
            Assembly: GCF_056863915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Limosilactobacillus reuteri
  ORGANISM  Limosilactobacillus reuteri
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Limosilactobacillus.
REFERENCE   1  (bases 1 to 1948412)
  AUTHORS   Lee,J.Y. and Kim,B.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2026) R&D center, Mediogen, 17, Megapolliseu
            3-ro, Daesowon-myeon, Chungju-si 27461, South Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWEEU000000000.1.
            The Limosilactobacillus reuteri whole genome shotgun (WGS) project
            has the project accession NZ_JBWEEU000000000.  This version of the
            project (01) has the accession number NZ_JBWEEU010000000, and
            consists of sequence JBWEEU010000001.
            Bacteria and source DNA available from Mediogen, R&D center.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 05-JUL-2024
            Assembly Method        :: Flye v. 2.8.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 151.0x
            Sequencing Technology  :: PacBio Sequel; Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863915.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:16:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,011
            CDSs (total)                      :: 1,923
            Genes (coding)                    :: 1,868
            CDSs (with protein)               :: 1,868
            Genes (RNA)                       :: 88
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 55
            CDSs (without protein)            :: 55
            Pseudo Genes (ambiguous residues) :: 0 of 55
            Pseudo Genes (frameshifted)       :: 16 of 55
            Pseudo Genes (incomplete)         :: 29 of 55
            Pseudo Genes (internal stop)      :: 19 of 55
            Pseudo Genes (multiple problems)  :: 8 of 55
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1948412
                     /organism="Limosilactobacillus reuteri"
                     /mol_type="genomic DNA"
                     /strain="MG5463"
                     /isolation_source="Capsella bursa-pastoris"
                     /host="Plant"
                     /db_xref="taxon:1598"
                     /geo_loc_name="South Korea"
                     /collection_date="2021-02-26"
WGS         JBWEEU010000001
WGS_SCAFLD  NZ_CM166510
//
LOCUS       NZ_JBSSOU010000000   4981138 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 187b, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSOU000000000
VERSION     NZ_JBSSOU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664937
            Assembly: GCF_056862005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4981138)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSOU000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSOU000000000.  This version of the project
            (01) has the accession number NZ_JBSSOU010000000, and consists of
            sequences JBSSOU010000001-JBSSOU010000111.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 97.901x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862005.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:10:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,941
            CDSs (total)                      :: 4,831
            Genes (coding)                    :: 4,630
            CDSs (with protein)               :: 4,630
            Genes (RNA)                       :: 110
            rRNAs                             :: 8, 4, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 4, 3, 8 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 201
            CDSs (without protein)            :: 201
            Pseudo Genes (ambiguous residues) :: 0 of 201
            Pseudo Genes (frameshifted)       :: 71 of 201
            Pseudo Genes (incomplete)         :: 139 of 201
            Pseudo Genes (internal stop)      :: 34 of 201
            Pseudo Genes (multiple problems)  :: 38 of 201
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4981138
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="187b"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST162"
WGS         JBSSOU010000001-JBSSOU010000111
WGS_SCAFLD  NZ_JBSSOU010000001-NZ_JBSSOU010000111
//
LOCUS       NZ_JBTXOM010000000   2985209 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A70_7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOM000000000
VERSION     NZ_JBTXOM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798564
            Assembly: GCF_056865195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2985209)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOM000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXOM000000000.  This version of the project
            (01) has the accession number NZ_JBTXOM010000000, and consists of
            sequences JBTXOM010000001-JBTXOM010000173.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865195.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:29:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,990
            CDSs (total)                      :: 2,920
            Genes (coding)                    :: 2,807
            CDSs (with protein)               :: 2,807
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 113
            CDSs (without protein)            :: 113
            Pseudo Genes (ambiguous residues) :: 0 of 113
            Pseudo Genes (frameshifted)       :: 19 of 113
            Pseudo Genes (incomplete)         :: 83 of 113
            Pseudo Genes (internal stop)      :: 22 of 113
            Pseudo Genes (multiple problems)  :: 9 of 113
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2985209
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A70_7"
                     /isolation_source="emergency surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOM010000001-JBTXOM010000173
WGS_SCAFLD  NZ_JBTXOM010000001-NZ_JBTXOM010000173
//
LOCUS       NZ_JBSXNW010000000   3995006 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Flagellimonas sp. B-3, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXNW000000000
VERSION     NZ_JBSXNW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312064
            Assembly: GCF_056857835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Flagellimonas sp. B-3
  ORGANISM  Flagellimonas sp. B-3
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flagellimonas.
REFERENCE   1  (bases 1 to 3995006)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXNW000000000.1.
            The Flagellimonas sp. B-3 whole genome shotgun (WGS) project has
            the project accession NZ_JBSXNW000000000.  This version of the
            project (01) has the accession number NZ_JBSXNW010000000, and
            consists of sequences JBSXNW010000001-JBSXNW010000026.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 237.8x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857835.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:10:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,621
            CDSs (total)                      :: 3,573
            Genes (coding)                    :: 3,556
            CDSs (with protein)               :: 3,556
            Genes (RNA)                       :: 48
            rRNAs                             :: 2, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 17
            CDSs (without protein)            :: 17
            Pseudo Genes (ambiguous residues) :: 0 of 17
            Pseudo Genes (frameshifted)       :: 5 of 17
            Pseudo Genes (incomplete)         :: 13 of 17
            Pseudo Genes (internal stop)      :: 1 of 17
            Pseudo Genes (multiple problems)  :: 2 of 17
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3995006
                     /organism="Flagellimonas sp. B-3"
                     /mol_type="genomic DNA"
                     /strain="B-3"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472683"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.71773 N 63.86117 E"
                     /collection_date="2022-06"
WGS         JBSXNW010000001-JBSXNW010000026
WGS_SCAFLD  NZ_JBSXNW010000001-NZ_JBSXNW010000026
//
LOCUS       NZ_JBSYQW010000000   5433514 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter portucalensis strain 2SOA20merA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYQW000000000
VERSION     NZ_JBSYQW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364866
            Assembly: GCF_056859695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter portucalensis
  ORGANISM  Citrobacter portucalensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5433514)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5433514)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYQW000000000.1.
            The Citrobacter portucalensis whole genome shotgun (WGS) project
            has the project accession NZ_JBSYQW000000000.  This version of the
            project (01) has the accession number NZ_JBSYQW010000000, and
            consists of sequences JBSYQW010000001-JBSYQW010000217.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 17x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859695.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,438
            CDSs (total)                      :: 5,340
            Genes (coding)                    :: 5,181
            CDSs (with protein)               :: 5,181
            Genes (RNA)                       :: 98
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 159
            CDSs (without protein)            :: 159
            Pseudo Genes (ambiguous residues) :: 0 of 159
            Pseudo Genes (frameshifted)       :: 31 of 159
            Pseudo Genes (incomplete)         :: 130 of 159
            Pseudo Genes (internal stop)      :: 15 of 159
            Pseudo Genes (multiple problems)  :: 14 of 159
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5433514
                     /organism="Citrobacter portucalensis"
                     /mol_type="genomic DNA"
                     /strain="2SOA20merA"
                     /isolation_source="mWWTP outflow"
                     /db_xref="taxon:1639133"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYQW010000001-JBSYQW010000217
WGS_SCAFLD  NZ_JBSYQW010000001-NZ_JBSYQW010000217
//
LOCUS       NZ_JBSSOQ010000000   5307555 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 191a, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSOQ000000000
VERSION     NZ_JBSSOQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664941
            Assembly: GCF_056861835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5307555)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSOQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSOQ000000000.  This version of the project
            (01) has the accession number NZ_JBSSOQ010000000, and consists of
            sequences JBSSOQ010000001-JBSSOQ010000118.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.8x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861835.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:05:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,269
            CDSs (total)                      :: 5,159
            Genes (coding)                    :: 4,987
            CDSs (with protein)               :: 4,987
            Genes (RNA)                       :: 110
            rRNAs                             :: 8, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 172
            CDSs (without protein)            :: 172
            Pseudo Genes (ambiguous residues) :: 0 of 172
            Pseudo Genes (frameshifted)       :: 61 of 172
            Pseudo Genes (incomplete)         :: 121 of 172
            Pseudo Genes (internal stop)      :: 14 of 172
            Pseudo Genes (multiple problems)  :: 24 of 172
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5307555
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="191a"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST973"
WGS         JBSSOQ010000001-JBSSOQ010000118
WGS_SCAFLD  NZ_JBSSOQ010000001-NZ_JBSSOQ010000118
//
LOCUS       NZ_JBTXOF010000000   2980694 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A82_2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOF000000000
VERSION     NZ_JBTXOF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798571
            Assembly: GCF_056864955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2980694)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOF000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXOF000000000.  This version of the project
            (01) has the accession number NZ_JBTXOF010000000, and consists of
            sequences JBTXOF010000001-JBTXOF010000154.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 5x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864955.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:29:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,979
            CDSs (total)                      :: 2,909
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 19 of 112
            Pseudo Genes (incomplete)         :: 82 of 112
            Pseudo Genes (internal stop)      :: 22 of 112
            Pseudo Genes (multiple problems)  :: 9 of 112
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2980694
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A82_2"
                     /isolation_source="outpatient air"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOF010000001-JBTXOF010000154
WGS_SCAFLD  NZ_JBTXOF010000001-NZ_JBTXOF010000154
//
LOCUS       NZ_JBSSOO010000000   4786994 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 193a, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSOO000000000
VERSION     NZ_JBSSOO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664943
            Assembly: GCF_056861755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4786994)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSOO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSOO000000000.  This version of the project
            (01) has the accession number NZ_JBSSOO010000000, and consists of
            sequences JBSSOO010000001-JBSSOO010000077.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 91.131x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861755.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:06:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,702
            CDSs (total)                      :: 4,593
            Genes (coding)                    :: 4,464
            CDSs (with protein)               :: 4,464
            Genes (RNA)                       :: 109
            rRNAs                             :: 9, 7, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 23S)
            partial rRNAs                     :: 6, 7 (5S, 16S)
            tRNAs                             :: 83
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 129
            CDSs (without protein)            :: 129
            Pseudo Genes (ambiguous residues) :: 0 of 129
            Pseudo Genes (frameshifted)       :: 42 of 129
            Pseudo Genes (incomplete)         :: 76 of 129
            Pseudo Genes (internal stop)      :: 32 of 129
            Pseudo Genes (multiple problems)  :: 18 of 129
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4786994
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="193a"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST2448"
WGS         JBSSOO010000001-JBSSOO010000077
WGS_SCAFLD  NZ_JBSSOO010000001-NZ_JBSSOO010000077
//
LOCUS       NZ_JBSSPD010000000   5004310 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 99a, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSPD000000000
VERSION     NZ_JBSSPD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664928
            Assembly: GCF_056862355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5004310)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSPD000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSPD000000000.  This version of the project
            (01) has the accession number NZ_JBSSPD010000000, and consists of
            sequences JBSSPD010000001-JBSSPD010000079.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 91.483x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862355.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:39:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,869
            CDSs (total)                      :: 4,771
            Genes (coding)                    :: 4,635
            CDSs (with protein)               :: 4,635
            Genes (RNA)                       :: 98
            rRNAs                             :: 7, 1, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 5, 6 (5S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 136
            CDSs (without protein)            :: 136
            Pseudo Genes (ambiguous residues) :: 0 of 136
            Pseudo Genes (frameshifted)       :: 51 of 136
            Pseudo Genes (incomplete)         :: 101 of 136
            Pseudo Genes (internal stop)      :: 22 of 136
            Pseudo Genes (multiple problems)  :: 33 of 136
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5004310
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="99a"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST457"
WGS         JBSSPD010000001-JBSSPD010000079
WGS_SCAFLD  NZ_JBSSPD010000001-NZ_JBSSPD010000079
//
LOCUS       NZ_JBSYQQ010000000   5209399 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter portucalensis strain 2SOBe18cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYQQ000000000
VERSION     NZ_JBSYQQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364872
            Assembly: GCF_056859595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter portucalensis
  ORGANISM  Citrobacter portucalensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5209399)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5209399)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYQQ000000000.1.
            The Citrobacter portucalensis whole genome shotgun (WGS) project
            has the project accession NZ_JBSYQQ000000000.  This version of the
            project (01) has the accession number NZ_JBSYQQ010000000, and
            consists of sequences JBSYQQ010000001-JBSYQQ010000137.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 36x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859595.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:51:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,247
            CDSs (total)                      :: 5,160
            Genes (coding)                    :: 5,027
            CDSs (with protein)               :: 5,027
            Genes (RNA)                       :: 87
            rRNAs                             :: 4, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 4, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 37 of 133
            Pseudo Genes (incomplete)         :: 91 of 133
            Pseudo Genes (internal stop)      :: 21 of 133
            Pseudo Genes (multiple problems)  :: 12 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5209399
                     /organism="Citrobacter portucalensis"
                     /mol_type="genomic DNA"
                     /strain="2SOBe18cef"
                     /isolation_source="mWWTP outflow"
                     /db_xref="taxon:1639133"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYQQ010000001-JBSYQQ010000137
WGS_SCAFLD  NZ_JBSYQQ010000001-NZ_JBSYQQ010000137
//
LOCUS       NZ_JBWAYU010000000   5106954 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain LL_19, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWAYU000000000
VERSION     NZ_JBWAYU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56449259
            Assembly: GCF_056863805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5106954)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Clinical laboratory, The Second Affiliated
            Hospital Zhejiang University of Medicine, No. 88, Jiefang Road,
            Hangzhou, Zhejiang 310009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWAYU000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBWAYU000000000.  This version of the project
            (01) has the accession number NZ_JBWAYU010000000, and consists of
            sequences JBWAYU010000001-JBWAYU010000222.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863805.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:39:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,167
            CDSs (total)                      :: 5,085
            Genes (coding)                    :: 4,846
            CDSs (with protein)               :: 4,846
            Genes (RNA)                       :: 82
            rRNAs                             :: 1, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 4 (16S)
            tRNAs                             :: 67
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 239
            CDSs (without protein)            :: 239
            Pseudo Genes (ambiguous residues) :: 0 of 239
            Pseudo Genes (frameshifted)       :: 65 of 239
            Pseudo Genes (incomplete)         :: 174 of 239
            Pseudo Genes (internal stop)      :: 34 of 239
            Pseudo Genes (multiple problems)  :: 31 of 239
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5106954
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="LL_19"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Yunnan"
                     /collection_date="2025-12-05"
WGS         JBWAYU010000001-JBWAYU010000222
WGS_SCAFLD  NZ_JBWAYU010000001-NZ_JBWAYU010000222
//
LOCUS       NZ_JBSSOR010000000   5308712 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 190a, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSOR000000000
VERSION     NZ_JBSSOR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664940
            Assembly: GCF_056861885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5308712)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSOR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSOR000000000.  This version of the project
            (01) has the accession number NZ_JBSSOR010000000, and consists of
            sequences JBSSOR010000001-JBSSOR010000109.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 101.263x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861885.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:06:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,265
            CDSs (total)                      :: 5,156
            Genes (coding)                    :: 4,979
            CDSs (with protein)               :: 4,979
            Genes (RNA)                       :: 109
            rRNAs                             :: 8, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 177
            CDSs (without protein)            :: 177
            Pseudo Genes (ambiguous residues) :: 0 of 177
            Pseudo Genes (frameshifted)       :: 60 of 177
            Pseudo Genes (incomplete)         :: 126 of 177
            Pseudo Genes (internal stop)      :: 14 of 177
            Pseudo Genes (multiple problems)  :: 23 of 177
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5308712
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="190a"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST973"
WGS         JBSSOR010000001-JBSSOR010000109
WGS_SCAFLD  NZ_JBSSOR010000001-NZ_JBSSOR010000109
//
LOCUS       NZ_JBTXOG010000000   3051009 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A78_6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOG000000000
VERSION     NZ_JBTXOG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798570
            Assembly: GCF_056865005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 3051009)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOG000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXOG000000000.  This version of the project
            (01) has the accession number NZ_JBTXOG010000000, and consists of
            sequences JBTXOG010000001-JBTXOG010000402.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865005.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:24:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,193
            CDSs (total)                      :: 3,122
            Genes (coding)                    :: 2,950
            CDSs (with protein)               :: 2,950
            Genes (RNA)                       :: 71
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 172
            CDSs (without protein)            :: 172
            Pseudo Genes (ambiguous residues) :: 0 of 172
            Pseudo Genes (frameshifted)       :: 19 of 172
            Pseudo Genes (incomplete)         :: 141 of 172
            Pseudo Genes (internal stop)      :: 23 of 172
            Pseudo Genes (multiple problems)  :: 9 of 172
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3051009
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A78_6"
                     /isolation_source="outpatient air"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOG010000001-JBTXOG010000402
WGS_SCAFLD  NZ_JBTXOG010000001-NZ_JBTXOG010000402
//
LOCUS       NZ_JBTXNX010000000   2979365 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A86_6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXNX000000000
VERSION     NZ_JBTXNX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798579
            Assembly: GCF_056864705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2979365)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXNX000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXNX000000000.  This version of the project
            (01) has the accession number NZ_JBTXNX010000000, and consists of
            sequences JBTXNX010000001-JBTXNX010000145.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864705.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:33:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,976
            CDSs (total)                      :: 2,906
            Genes (coding)                    :: 2,793
            CDSs (with protein)               :: 2,793
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 113
            CDSs (without protein)            :: 113
            Pseudo Genes (ambiguous residues) :: 0 of 113
            Pseudo Genes (frameshifted)       :: 19 of 113
            Pseudo Genes (incomplete)         :: 83 of 113
            Pseudo Genes (internal stop)      :: 22 of 113
            Pseudo Genes (multiple problems)  :: 9 of 113
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2979365
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A86_6"
                     /isolation_source="emergency surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXNX010000001-JBTXNX010000145
WGS_SCAFLD  NZ_JBTXNX010000001-NZ_JBTXNX010000145
//
LOCUS       NZ_JBSXON010000000   4076030 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Halopseudomonas sp. L-58, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXON000000000
VERSION     NZ_JBSXON000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312085
            Assembly: GCF_056859475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Halopseudomonas sp. L-58
  ORGANISM  Halopseudomonas sp. L-58
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Halopseudomonas.
REFERENCE   1  (bases 1 to 4076030)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXON000000000.1.
            The Halopseudomonas sp. L-58 whole genome shotgun (WGS) project has
            the project accession NZ_JBSXON000000000.  This version of the
            project (01) has the accession number NZ_JBSXON010000000, and
            consists of sequences JBSXON010000001-JBSXON010000091.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 216.03x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859475.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:35:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,812
            CDSs (total)                      :: 3,752
            Genes (coding)                    :: 3,667
            CDSs (with protein)               :: 3,667
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 85
            CDSs (without protein)            :: 85
            Pseudo Genes (ambiguous residues) :: 0 of 85
            Pseudo Genes (frameshifted)       :: 15 of 85
            Pseudo Genes (incomplete)         :: 68 of 85
            Pseudo Genes (internal stop)      :: 14 of 85
            Pseudo Genes (multiple problems)  :: 9 of 85
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4076030
                     /organism="Halopseudomonas sp. L-58"
                     /mol_type="genomic DNA"
                     /strain="L-58"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472704"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.69187 N 63.83227 E"
                     /collection_date="2022-06"
WGS         JBSXON010000001-JBSXON010000091
WGS_SCAFLD  NZ_JBSXON010000001-NZ_JBSXON010000091
//
LOCUS       NZ_JBSSOT010000000   5195620 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 188a, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSOT000000000
VERSION     NZ_JBSSOT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664938
            Assembly: GCF_056861965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5195620)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSOT000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSOT000000000.  This version of the project
            (01) has the accession number NZ_JBSSOT010000000, and consists of
            sequences JBSSOT010000001-JBSSOT010000135.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 106.392x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861965.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:06:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,202
            CDSs (total)                      :: 5,090
            Genes (coding)                    :: 4,892
            CDSs (with protein)               :: 4,892
            Genes (RNA)                       :: 112
            rRNAs                             :: 7, 4, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 5, 3, 9 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 66 of 198
            Pseudo Genes (incomplete)         :: 136 of 198
            Pseudo Genes (internal stop)      :: 33 of 198
            Pseudo Genes (multiple problems)  :: 32 of 198
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5195620
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="188a"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST212"
WGS         JBSSOT010000001-JBSSOT010000135
WGS_SCAFLD  NZ_JBSSOT010000001-NZ_JBSSOT010000135
//
LOCUS       NZ_JBSSOY010000000   5151188 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 164c, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSOY000000000
VERSION     NZ_JBSSOY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664933
            Assembly: GCF_056862155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5151188)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSOY000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSOY000000000.  This version of the project
            (01) has the accession number NZ_JBSSOY010000000, and consists of
            sequences JBSSOY010000001-JBSSOY010000096.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 91.722x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862155.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:07:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,034
            CDSs (total)                      :: 4,930
            Genes (coding)                    :: 4,747
            CDSs (with protein)               :: 4,747
            Genes (RNA)                       :: 104
            rRNAs                             :: 9, 3, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 2, 7 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 183
            CDSs (without protein)            :: 183
            Pseudo Genes (ambiguous residues) :: 0 of 183
            Pseudo Genes (frameshifted)       :: 59 of 183
            Pseudo Genes (incomplete)         :: 126 of 183
            Pseudo Genes (internal stop)      :: 23 of 183
            Pseudo Genes (multiple problems)  :: 25 of 183
            Pseudo Genes (short protein)      :: 1 of 183
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5151188
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="164c"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST624"
WGS         JBSSOY010000001-JBSSOY010000096
WGS_SCAFLD  NZ_JBSSOY010000001-NZ_JBSSOY010000096
//
LOCUS       NZ_JBSYSA010000000   5376794 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter youngae strain 2SIA10cef, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYSA000000000
VERSION     NZ_JBSYSA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364836
            Assembly: GCF_056860315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter youngae
  ORGANISM  Citrobacter youngae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5376794)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5376794)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYSA000000000.1.
            The Citrobacter youngae whole genome shotgun (WGS) project has the
            project accession NZ_JBSYSA000000000.  This version of the project
            (01) has the accession number NZ_JBSYSA010000000, and consists of
            sequences JBSYSA010000001-JBSYSA010000122.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 24x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056860315.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:54:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,380
            CDSs (total)                      :: 5,288
            Genes (coding)                    :: 5,132
            CDSs (with protein)               :: 5,132
            Genes (RNA)                       :: 92
            rRNAs                             :: 4, 6, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 3, 6 (5S, 16S)
            tRNAs                             :: 70
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 156
            CDSs (without protein)            :: 156
            Pseudo Genes (ambiguous residues) :: 0 of 156
            Pseudo Genes (frameshifted)       :: 50 of 156
            Pseudo Genes (incomplete)         :: 117 of 156
            Pseudo Genes (internal stop)      :: 19 of 156
            Pseudo Genes (multiple problems)  :: 27 of 156
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5376794
                     /organism="Citrobacter youngae"
                     /mol_type="genomic DNA"
                     /strain="2SIA10cef"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:133448"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYSA010000001-JBSYSA010000122
WGS_SCAFLD  NZ_JBSYSA010000001-NZ_JBSYSA010000122
//
LOCUS       NZ_JBTXNZ010000000   3029123 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A84_8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXNZ000000000
VERSION     NZ_JBTXNZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798577
            Assembly: GCF_056864745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 3029123)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXNZ000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXNZ000000000.  This version of the project
            (01) has the accession number NZ_JBTXNZ010000000, and consists of
            sequences JBTXNZ010000001-JBTXNZ010000325.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864745.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:24:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,130
            CDSs (total)                      :: 3,059
            Genes (coding)                    :: 2,916
            CDSs (with protein)               :: 2,916
            Genes (RNA)                       :: 71
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 1 (5S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 143
            CDSs (without protein)            :: 143
            Pseudo Genes (ambiguous residues) :: 0 of 143
            Pseudo Genes (frameshifted)       :: 18 of 143
            Pseudo Genes (incomplete)         :: 114 of 143
            Pseudo Genes (internal stop)      :: 22 of 143
            Pseudo Genes (multiple problems)  :: 9 of 143
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3029123
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A84_8"
                     /isolation_source="outpatient surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXNZ010000001-JBTXNZ010000325
WGS_SCAFLD  NZ_JBTXNZ010000001-NZ_JBTXNZ010000325
//
LOCUS       NZ_JBWAYT010000000   5110072 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain LL_39, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWAYT000000000
VERSION     NZ_JBWAYT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56449260
            Assembly: GCF_056863735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5110072)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Clinical laboratory, The Second Affiliated
            Hospital Zhejiang University of Medicine, No. 88, Jiefang Road,
            Hangzhou, Zhejiang 310009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWAYT000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBWAYT000000000.  This version of the project
            (01) has the accession number NZ_JBWAYT010000000, and consists of
            sequences JBWAYT010000001-JBWAYT010000154.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863735.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:46:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,187
            CDSs (total)                      :: 5,088
            Genes (coding)                    :: 4,856
            CDSs (with protein)               :: 4,856
            Genes (RNA)                       :: 99
            rRNAs                             :: 2, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 5 (16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 16
            Pseudo Genes (total)              :: 232
            CDSs (without protein)            :: 232
            Pseudo Genes (ambiguous residues) :: 0 of 232
            Pseudo Genes (frameshifted)       :: 65 of 232
            Pseudo Genes (incomplete)         :: 162 of 232
            Pseudo Genes (internal stop)      :: 35 of 232
            Pseudo Genes (multiple problems)  :: 28 of 232
            Pseudo Genes (short protein)      :: 1 of 232
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5110072
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="LL_39"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Yunnan"
                     /collection_date="2025-12-05"
WGS         JBWAYT010000001-JBWAYT010000154
WGS_SCAFLD  NZ_JBWAYT010000001-NZ_JBWAYT010000154
//
LOCUS       NZ_JBTXPD010000000   3086498 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecalis strain HO35, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXPD000000000
VERSION     NZ_JBTXPD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798546
            Assembly: GCF_056865835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 3086498)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXPD000000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JBTXPD000000000.  This version of the
            project (01) has the accession number NZ_JBTXPD010000000, and
            consists of sequences JBTXPD010000001-JBTXPD010000078.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865835.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:47:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,069
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,926
            CDSs (with protein)               :: 2,926
            Genes (RNA)                       :: 67
            rRNAs                             :: 3, 2 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 2 (5S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 19 of 76
            Pseudo Genes (incomplete)         :: 55 of 76
            Pseudo Genes (internal stop)      :: 7 of 76
            Pseudo Genes (multiple problems)  :: 4 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3086498
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="HO35"
                     /isolation_source="emergency surface"
                     /db_xref="taxon:1351"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2025-06-10"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXPD010000001-JBTXPD010000078
WGS_SCAFLD  NZ_JBTXPD010000001-NZ_JBTXPD010000078
//
LOCUS       NZ_JBTXNT010000000   2978999 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A90_8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXNT000000000
VERSION     NZ_JBTXNT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798583
            Assembly: GCF_056864565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2978999)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXNT000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXNT000000000.  This version of the project
            (01) has the accession number NZ_JBTXNT010000000, and consists of
            sequences JBTXNT010000001-JBTXNT010000147.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864565.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:24:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,982
            CDSs (total)                      :: 2,912
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 18 of 115
            Pseudo Genes (incomplete)         :: 86 of 115
            Pseudo Genes (internal stop)      :: 22 of 115
            Pseudo Genes (multiple problems)  :: 9 of 115
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2978999
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A90_8"
                     /isolation_source="emergency surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXNT010000001-JBTXNT010000147
WGS_SCAFLD  NZ_JBTXNT010000001-NZ_JBTXNT010000147
//
LOCUS       NZ_JBWAYR010000000   5118431 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain LL_102, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWAYR000000000
VERSION     NZ_JBWAYR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56449262
            Assembly: GCF_056863685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5118431)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Clinical laboratory, The Second Affiliated
            Hospital Zhejiang University of Medicine, No. 88, Jiefang Road,
            Hangzhou, Zhejiang 310009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWAYR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBWAYR000000000.  This version of the project
            (01) has the accession number NZ_JBWAYR010000000, and consists of
            sequences JBWAYR010000001-JBWAYR010000128.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863685.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:41:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,107
            CDSs (total)                      :: 5,006
            Genes (coding)                    :: 4,758
            CDSs (with protein)               :: 4,758
            Genes (RNA)                       :: 101
            rRNAs                             :: 3, 6, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 248
            CDSs (without protein)            :: 248
            Pseudo Genes (ambiguous residues) :: 0 of 248
            Pseudo Genes (frameshifted)       :: 67 of 248
            Pseudo Genes (incomplete)         :: 176 of 248
            Pseudo Genes (internal stop)      :: 40 of 248
            Pseudo Genes (multiple problems)  :: 31 of 248
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5118431
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="LL_102"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Yunnan"
                     /collection_date="2025-12-05"
WGS         JBWAYR010000001-JBWAYR010000128
WGS_SCAFLD  NZ_JBWAYR010000001-NZ_JBWAYR010000128
//
LOCUS       NZ_JBSSPA010000000   5004133 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 134a, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSPA000000000
VERSION     NZ_JBSSPA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664931
            Assembly: GCF_056862235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5004133)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSPA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSPA000000000.  This version of the project
            (01) has the accession number NZ_JBSSPA010000000, and consists of
            sequences JBSSPA010000001-JBSSPA010000092.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 121.027x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862235.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:54:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,877
            CDSs (total)                      :: 4,776
            Genes (coding)                    :: 4,638
            CDSs (with protein)               :: 4,638
            Genes (RNA)                       :: 101
            rRNAs                             :: 7, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 6, 4 (5S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 138
            CDSs (without protein)            :: 138
            Pseudo Genes (ambiguous residues) :: 0 of 138
            Pseudo Genes (frameshifted)       :: 51 of 138
            Pseudo Genes (incomplete)         :: 102 of 138
            Pseudo Genes (internal stop)      :: 22 of 138
            Pseudo Genes (multiple problems)  :: 32 of 138
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5004133
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="134a"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST457"
WGS         JBSSPA010000001-JBSSPA010000092
WGS_SCAFLD  NZ_JBSSPA010000001-NZ_JBSSPA010000092
//
LOCUS       NZ_JBTXOI010000000   2978340 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A78_3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOI000000000
VERSION     NZ_JBTXOI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798568
            Assembly: GCF_056865075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2978340)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOI000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXOI000000000.  This version of the project
            (01) has the accession number NZ_JBTXOI010000000, and consists of
            sequences JBTXOI010000001-JBTXOI010000145.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865075.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:31:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,980
            CDSs (total)                      :: 2,910
            Genes (coding)                    :: 2,791
            CDSs (with protein)               :: 2,791
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 19 of 119
            Pseudo Genes (incomplete)         :: 89 of 119
            Pseudo Genes (internal stop)      :: 22 of 119
            Pseudo Genes (multiple problems)  :: 9 of 119
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2978340
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A78_3"
                     /isolation_source="outpatient air"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOI010000001-JBTXOI010000145
WGS_SCAFLD  NZ_JBTXOI010000001-NZ_JBTXOI010000145
//
LOCUS       NZ_JBTXOE010000000   2982314 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A82_7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOE000000000
VERSION     NZ_JBTXOE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798572
            Assembly: GCF_056864905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2982314)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOE000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXOE000000000.  This version of the project
            (01) has the accession number NZ_JBTXOE010000000, and consists of
            sequences JBTXOE010000001-JBTXOE010000163.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864905.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:23:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,988
            CDSs (total)                      :: 2,918
            Genes (coding)                    :: 2,801
            CDSs (with protein)               :: 2,801
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 19 of 117
            Pseudo Genes (incomplete)         :: 87 of 117
            Pseudo Genes (internal stop)      :: 22 of 117
            Pseudo Genes (multiple problems)  :: 9 of 117
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2982314
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A82_7"
                     /isolation_source="outpatient air"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOE010000001-JBTXOE010000163
WGS_SCAFLD  NZ_JBTXOE010000001-NZ_JBTXOE010000163
//
LOCUS       NZ_JBSSON010000000   5242142 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 194c, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSON000000000
VERSION     NZ_JBSSON000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664944
            Assembly: GCF_056861675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5242142)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSON000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSON000000000.  This version of the project
            (01) has the accession number NZ_JBSSON010000000, and consists of
            sequences JBSSON010000001-JBSSON010000156.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 105.151x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861675.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:54:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,275
            CDSs (total)                      :: 5,161
            Genes (coding)                    :: 4,957
            CDSs (with protein)               :: 4,957
            Genes (RNA)                       :: 114
            rRNAs                             :: 9, 4, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 6, 3, 9 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 204
            CDSs (without protein)            :: 204
            Pseudo Genes (ambiguous residues) :: 0 of 204
            Pseudo Genes (frameshifted)       :: 66 of 204
            Pseudo Genes (incomplete)         :: 142 of 204
            Pseudo Genes (internal stop)      :: 33 of 204
            Pseudo Genes (multiple problems)  :: 32 of 204
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5242142
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="194c"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST212"
WGS         JBSSON010000001-JBSSON010000156
WGS_SCAFLD  NZ_JBSSON010000001-NZ_JBSSON010000156
//
LOCUS       NZ_JBTXOY010000000   3122309 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecalis strain HO40, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOY000000000
VERSION     NZ_JBTXOY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798551
            Assembly: GCF_056865625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 3122309)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOY000000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JBTXOY000000000.  This version of the
            project (01) has the accession number NZ_JBTXOY010000000, and
            consists of sequences JBTXOY010000001-JBTXOY010000081.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865625.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:51:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,125
            CDSs (total)                      :: 3,051
            Genes (coding)                    :: 2,979
            CDSs (with protein)               :: 2,979
            Genes (RNA)                       :: 74
            rRNAs                             :: 3, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2, 4 (5S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 72
            CDSs (without protein)            :: 72
            Pseudo Genes (ambiguous residues) :: 0 of 72
            Pseudo Genes (frameshifted)       :: 17 of 72
            Pseudo Genes (incomplete)         :: 54 of 72
            Pseudo Genes (internal stop)      :: 6 of 72
            Pseudo Genes (multiple problems)  :: 4 of 72
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3122309
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="HO40"
                     /isolation_source="emergency surface"
                     /db_xref="taxon:1351"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2025-06-10"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOY010000001-JBTXOY010000081
WGS_SCAFLD  NZ_JBTXOY010000001-NZ_JBTXOY010000081
//
LOCUS       NZ_JBSSPH010000000   5213332 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 73a, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSPH000000000
VERSION     NZ_JBSSPH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664924
            Assembly: GCF_056862525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5213332)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSPH000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSPH000000000.  This version of the project
            (01) has the accession number NZ_JBSSPH010000000, and consists of
            sequences JBSSPH010000001-JBSSPH010000110.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 78.14x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862525.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:16:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,198
            CDSs (total)                      :: 5,090
            Genes (coding)                    :: 4,893
            CDSs (with protein)               :: 4,893
            Genes (RNA)                       :: 108
            rRNAs                             :: 8, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5, 3, 1 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 197
            CDSs (without protein)            :: 197
            Pseudo Genes (ambiguous residues) :: 0 of 197
            Pseudo Genes (frameshifted)       :: 71 of 197
            Pseudo Genes (incomplete)         :: 134 of 197
            Pseudo Genes (internal stop)      :: 31 of 197
            Pseudo Genes (multiple problems)  :: 34 of 197
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5213332
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="73a"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST162"
WGS         JBSSPH010000001-JBSSPH010000110
WGS_SCAFLD  NZ_JBSSPH010000001-NZ_JBSSPH010000110
//
LOCUS       NZ_JBTXOX010000000   3123436 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecalis strain HO41, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOX000000000
VERSION     NZ_JBTXOX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798552
            Assembly: GCF_056865595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 3123436)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOX000000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JBTXOX000000000.  This version of the
            project (01) has the accession number NZ_JBTXOX010000000, and
            consists of sequences JBTXOX010000001-JBTXOX010000085.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865595.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:29:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,124
            CDSs (total)                      :: 3,050
            Genes (coding)                    :: 2,973
            CDSs (with protein)               :: 2,973
            Genes (RNA)                       :: 74
            rRNAs                             :: 3, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2, 4 (5S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 18 of 77
            Pseudo Genes (incomplete)         :: 59 of 77
            Pseudo Genes (internal stop)      :: 6 of 77
            Pseudo Genes (multiple problems)  :: 5 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3123436
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="HO41"
                     /isolation_source="emergency surface"
                     /db_xref="taxon:1351"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2025-06-10"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOX010000001-JBTXOX010000085
WGS_SCAFLD  NZ_JBTXOX010000001-NZ_JBTXOX010000085
//
LOCUS       NZ_JBWAYQ010000000   4832660 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain LL_104, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWAYQ000000000
VERSION     NZ_JBWAYQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56449263
            Assembly: GCF_056863645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4832660)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Clinical laboratory, The Second Affiliated
            Hospital Zhejiang University of Medicine, No. 88, Jiefang Road,
            Hangzhou, Zhejiang 310009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWAYQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBWAYQ000000000.  This version of the project
            (01) has the accession number NZ_JBWAYQ010000000, and consists of
            sequences JBWAYQ010000001-JBWAYQ010000219.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863645.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:45:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,861
            CDSs (total)                      :: 4,772
            Genes (coding)                    :: 4,490
            CDSs (with protein)               :: 4,490
            Genes (RNA)                       :: 89
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 4, 2 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 282
            CDSs (without protein)            :: 282
            Pseudo Genes (ambiguous residues) :: 0 of 282
            Pseudo Genes (frameshifted)       :: 62 of 282
            Pseudo Genes (incomplete)         :: 209 of 282
            Pseudo Genes (internal stop)      :: 40 of 282
            Pseudo Genes (multiple problems)  :: 26 of 282
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4832660
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="LL_104"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Yunnan"
                     /collection_date="2025-12-05"
WGS         JBWAYQ010000001-JBWAYQ010000219
WGS_SCAFLD  NZ_JBWAYQ010000001-NZ_JBWAYQ010000219
//
LOCUS       NZ_JBXEPP010000000   2749068 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus hirae strain 10K2I, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXEPP000000000
VERSION     NZ_JBXEPP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54275483
            Assembly: GCF_056858135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus hirae
  ORGANISM  Enterococcus hirae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2749068)
  AUTHORS   Brenciani,A.
  TITLE     optrA-carrying enterococci recovered from soil and river sediments
            of the K2 region, Pakistan
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2749068)
  AUTHORS   Brenciani,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-DEC-2025) Unit of Microbiology, Department of
            Biomedical Sciences & Public Health, Polytechnic University of
            Marche Medical School, Tronto 10/A, Ancona 60126, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEPP000000000.1.
            The Enterococcus hirae whole genome shotgun (WGS) project has the
            project accession NZ_JBXEPP000000000.  This version of the project
            (01) has the accession number NZ_JBXEPP010000000, and consists of
            sequences JBXEPP010000001-JBXEPP010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Complete Genomics
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858135.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:33:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,616
            CDSs (total)                      :: 2,528
            Genes (coding)                    :: 2,443
            CDSs (with protein)               :: 2,443
            Genes (RNA)                       :: 88
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 85
            CDSs (without protein)            :: 85
            Pseudo Genes (ambiguous residues) :: 0 of 85
            Pseudo Genes (frameshifted)       :: 36 of 85
            Pseudo Genes (incomplete)         :: 41 of 85
            Pseudo Genes (internal stop)      :: 22 of 85
            Pseudo Genes (multiple problems)  :: 11 of 85
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2749068
                     /organism="Enterococcus hirae"
                     /mol_type="genomic DNA"
                     /strain="10K2I"
                     /isolation_source="river sediment"
                     /db_xref="taxon:1354"
                     /geo_loc_name="Pakistan"
                     /collection_date="2024"
                     /collected_by="Department of Life and Environmental
                     Sciences, Polytechnic University of Marche, Ancona"
WGS         JBXEPP010000001-JBXEPP010000003
WGS_SCAFLD  NZ_CM166488
WGS_SCAFLD  NZ_JBXEPP010000002-NZ_JBXEPP010000003
//
LOCUS       NZ_JBSSOX010000000   5050090 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 170b, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSOX000000000
VERSION     NZ_JBSSOX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664934
            Assembly: GCF_056862115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5050090)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSOX000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSOX000000000.  This version of the project
            (01) has the accession number NZ_JBSSOX010000000, and consists of
            sequences JBSSOX010000001-JBSSOX010000161.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 87.208x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862115.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:03:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,047
            CDSs (total)                      :: 4,945
            Genes (coding)                    :: 4,694
            CDSs (with protein)               :: 4,694
            Genes (RNA)                       :: 102
            rRNAs                             :: 7, 6, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 4, 6, 2 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 251
            CDSs (without protein)            :: 251
            Pseudo Genes (ambiguous residues) :: 0 of 251
            Pseudo Genes (frameshifted)       :: 93 of 251
            Pseudo Genes (incomplete)         :: 166 of 251
            Pseudo Genes (internal stop)      :: 46 of 251
            Pseudo Genes (multiple problems)  :: 47 of 251
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5050090
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="170b"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST58"
WGS         JBSSOX010000001-JBSSOX010000161
WGS_SCAFLD  NZ_JBSSOX010000001-NZ_JBSSOX010000161
//
LOCUS       NZ_JBSSOS010000000   5003227 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 188c, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSOS000000000
VERSION     NZ_JBSSOS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664939
            Assembly: GCF_056861925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5003227)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSOS000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSOS000000000.  This version of the project
            (01) has the accession number NZ_JBSSOS010000000, and consists of
            sequences JBSSOS010000001-JBSSOS010000080.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 87.854x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861925.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:06:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,869
            CDSs (total)                      :: 4,770
            Genes (coding)                    :: 4,634
            CDSs (with protein)               :: 4,634
            Genes (RNA)                       :: 99
            rRNAs                             :: 8, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 6, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 136
            CDSs (without protein)            :: 136
            Pseudo Genes (ambiguous residues) :: 0 of 136
            Pseudo Genes (frameshifted)       :: 50 of 136
            Pseudo Genes (incomplete)         :: 101 of 136
            Pseudo Genes (internal stop)      :: 22 of 136
            Pseudo Genes (multiple problems)  :: 32 of 136
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5003227
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="188c"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST457"
WGS         JBSSOS010000001-JBSSOS010000080
WGS_SCAFLD  NZ_JBSSOS010000001-NZ_JBSSOS010000080
//
LOCUS       NZ_JBSXOH010000000   6267294 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Cyclobacterium sp. L-R, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXOH000000000
VERSION     NZ_JBSXOH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312091
            Assembly: GCF_056859355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cyclobacterium sp. L-R
  ORGANISM  Cyclobacterium sp. L-R
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
REFERENCE   1  (bases 1 to 6267294)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXOH000000000.1.
            The Cyclobacterium sp. L-R whole genome shotgun (WGS) project has
            the project accession NZ_JBSXOH000000000.  This version of the
            project (01) has the accession number NZ_JBSXOH010000000, and
            consists of sequences JBSXOH010000001-JBSXOH010000101.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 180.12x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859355.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:35:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,985
            CDSs (total)                      :: 4,940
            Genes (coding)                    :: 4,912
            CDSs (with protein)               :: 4,912
            Genes (RNA)                       :: 45
            rRNAs                             :: 3, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2, 2 (5S, 16S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 8 of 28
            Pseudo Genes (incomplete)         :: 17 of 28
            Pseudo Genes (internal stop)      :: 7 of 28
            Pseudo Genes (multiple problems)  :: 4 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6267294
                     /organism="Cyclobacterium sp. L-R"
                     /mol_type="genomic DNA"
                     /strain="L-R"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472710"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.69187 N 63.83227 E"
                     /collection_date="2022-06"
WGS         JBSXOH010000001-JBSXOH010000101
WGS_SCAFLD  NZ_JBSXOH010000001-NZ_JBSXOH010000101
//
LOCUS       NZ_JBSSPK010000000   5008302 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 61c, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSPK000000000
VERSION     NZ_JBSSPK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664921
            Assembly: GCF_056862615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5008302)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSPK000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSPK000000000.  This version of the project
            (01) has the accession number NZ_JBSSPK010000000, and consists of
            sequences JBSSPK010000001-JBSSPK010000082.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 82.702x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862615.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:59:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,874
            CDSs (total)                      :: 4,773
            Genes (coding)                    :: 4,638
            CDSs (with protein)               :: 4,638
            Genes (RNA)                       :: 101
            rRNAs                             :: 8, 1, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 6, 7 (5S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 135
            CDSs (without protein)            :: 135
            Pseudo Genes (ambiguous residues) :: 0 of 135
            Pseudo Genes (frameshifted)       :: 51 of 135
            Pseudo Genes (incomplete)         :: 100 of 135
            Pseudo Genes (internal stop)      :: 22 of 135
            Pseudo Genes (multiple problems)  :: 33 of 135
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5008302
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="61c"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST457"
WGS         JBSSPK010000001-JBSSPK010000082
WGS_SCAFLD  NZ_JBSSPK010000001-NZ_JBSSPK010000082
//
LOCUS       NZ_JBSSPF010000000   5003661 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia coli strain 85b, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSSPF000000000
VERSION     NZ_JBSSPF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53664926
            Assembly: GCF_056862375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5003661)
  AUTHORS   Masarikova,M., Papouskova,A., Cejkova,D., Sukkar,I. and Cizek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSSPF000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBSSPF000000000.  This version of the project
            (01) has the accession number NZ_JBSSPF010000000, and consists of
            sequences JBSSPF010000001-JBSSPF010000087.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v1.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 116.355x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862375.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:12:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,871
            CDSs (total)                      :: 4,771
            Genes (coding)                    :: 4,632
            CDSs (with protein)               :: 4,632
            Genes (RNA)                       :: 100
            rRNAs                             :: 7, 1, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 5, 6 (5S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 139
            CDSs (without protein)            :: 139
            Pseudo Genes (ambiguous residues) :: 0 of 139
            Pseudo Genes (frameshifted)       :: 51 of 139
            Pseudo Genes (incomplete)         :: 103 of 139
            Pseudo Genes (internal stop)      :: 22 of 139
            Pseudo Genes (multiple problems)  :: 32 of 139
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5003661
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="85b"
                     /isolation_source="feces"
                     /host="Erinaceus europaeus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czechia"
                     /collection_date="2020-01-15"
                     /genotype="ST457"
WGS         JBSSPF010000001-JBSSPF010000087
WGS_SCAFLD  NZ_JBSSPF010000001-NZ_JBSSPF010000087
//
LOCUS       NZ_JBTXOD010000000   2977639 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A82_8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOD000000000
VERSION     NZ_JBTXOD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798573
            Assembly: GCF_056864875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2977639)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOD000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXOD000000000.  This version of the project
            (01) has the accession number NZ_JBTXOD010000000, and consists of
            sequences JBTXOD010000001-JBTXOD010000145.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 9x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864875.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:31:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,977
            CDSs (total)                      :: 2,907
            Genes (coding)                    :: 2,792
            CDSs (with protein)               :: 2,792
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 19 of 115
            Pseudo Genes (incomplete)         :: 85 of 115
            Pseudo Genes (internal stop)      :: 22 of 115
            Pseudo Genes (multiple problems)  :: 9 of 115
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2977639
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A82_8"
                     /isolation_source="outpatient air"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOD010000001-JBTXOD010000145
WGS_SCAFLD  NZ_JBTXOD010000001-NZ_JBTXOD010000145
//
LOCUS       NZ_JBXEPQ010000000   3125554 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain 8K2J, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXEPQ000000000
VERSION     NZ_JBXEPQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54275482
            Assembly: GCF_056858155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 3125554)
  AUTHORS   Brenciani,A.
  TITLE     optrA-carrying enterococci recovered from soil and river sediments
            of the K2 region, Pakistan
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3125554)
  AUTHORS   Brenciani,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-DEC-2025) Unit of Microbiology, Department of
            Biomedical Sciences & Public Health, Polytechnic University of
            Marche Medical School, Tronto 10/A, Ancona 60126, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEPQ000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBXEPQ000000000.  This version of the project
            (01) has the accession number NZ_JBXEPQ010000000, and consists of
            sequences JBXEPQ010000001-JBXEPQ010000009.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Complete Genomics
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858155.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:44:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,086
            CDSs (total)                      :: 2,992
            Genes (coding)                    :: 2,850
            CDSs (with protein)               :: 2,850
            Genes (RNA)                       :: 94
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 142
            CDSs (without protein)            :: 142
            Pseudo Genes (ambiguous residues) :: 0 of 142
            Pseudo Genes (frameshifted)       :: 43 of 142
            Pseudo Genes (incomplete)         :: 88 of 142
            Pseudo Genes (internal stop)      :: 31 of 142
            Pseudo Genes (multiple problems)  :: 17 of 142
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3125554
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="8K2J"
                     /isolation_source="river sediment"
                     /db_xref="taxon:1352"
                     /geo_loc_name="Pakistan"
                     /collection_date="2024"
                     /collected_by="Department of Life and Environmental
                     Sciences, Polytechnic University of Marche, Ancona"
WGS         JBXEPQ010000001-JBXEPQ010000009
WGS_SCAFLD  NZ_JBXEPQ010000001-NZ_JBXEPQ010000009
//
LOCUS       NZ_JBTXOT010000000   2956661 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecalis strain QC_21_4, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBTXOT000000000
VERSION     NZ_JBTXOT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798556
            Assembly: GCF_056865445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2956661)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOT000000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JBTXOT000000000.  This version of the
            project (01) has the accession number NZ_JBTXOT010000000, and
            consists of sequences JBTXOT010000001-JBTXOT010000100.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865445.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,965
            CDSs (total)                      :: 2,902
            Genes (coding)                    :: 2,851
            CDSs (with protein)               :: 2,851
            Genes (RNA)                       :: 63
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 9 of 51
            Pseudo Genes (incomplete)         :: 36 of 51
            Pseudo Genes (internal stop)      :: 7 of 51
            Pseudo Genes (multiple problems)  :: 1 of 51
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2956661
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="QC_21_4"
                     /isolation_source="outpatient surface"
                     /db_xref="taxon:1351"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-10-24"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOT010000001-JBTXOT010000100
WGS_SCAFLD  NZ_JBTXOT010000001-NZ_JBTXOT010000100
//
LOCUS       NZ_JBSYRH010000000   5167869 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter youngae strain 2SIB4mer, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSYRH000000000
VERSION     NZ_JBSYRH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53364855
            Assembly: GCF_056859955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter youngae
  ORGANISM  Citrobacter youngae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5167869)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Tracking Antibiotic Resistance in Aquatic Environments: Citrobacter
            spp. in Wastewater and Surface Water Systems of the Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5167869)
  AUTHORS   Jarmila,L., Iva,S., Davidova Gerzova,L., Palkovicova,J. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYRH000000000.1.
            The Citrobacter youngae whole genome shotgun (WGS) project has the
            project accession NZ_JBSYRH000000000.  This version of the project
            (01) has the accession number NZ_JBSYRH010000000, and consists of
            sequences JBSYRH010000001-JBSYRH010000147.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859955.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:47:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,138
            CDSs (total)                      :: 5,046
            Genes (coding)                    :: 4,908
            CDSs (with protein)               :: 4,908
            Genes (RNA)                       :: 92
            rRNAs                             :: 2, 6, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 6, 4 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 138
            CDSs (without protein)            :: 138
            Pseudo Genes (ambiguous residues) :: 0 of 138
            Pseudo Genes (frameshifted)       :: 33 of 138
            Pseudo Genes (incomplete)         :: 115 of 138
            Pseudo Genes (internal stop)      :: 21 of 138
            Pseudo Genes (multiple problems)  :: 29 of 138
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5167869
                     /organism="Citrobacter youngae"
                     /mol_type="genomic DNA"
                     /strain="2SIB4mer"
                     /isolation_source="mWWTP inflow"
                     /db_xref="taxon:133448"
                     /geo_loc_name="Czechia"
                     /collection_date="2021-04"
                     /collected_by="CEITEC VETUNI"
WGS         JBSYRH010000001-JBSYRH010000147
WGS_SCAFLD  NZ_JBSYRH010000001-NZ_JBSYRH010000147
//
LOCUS       NZ_JBTXOW010000000   3122956 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecalis strain HO42, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOW000000000
VERSION     NZ_JBTXOW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798553
            Assembly: GCF_056865555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 3122956)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOW000000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JBTXOW000000000.  This version of the
            project (01) has the accession number NZ_JBTXOW010000000, and
            consists of sequences JBTXOW010000001-JBTXOW010000090.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865555.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:25:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,127
            CDSs (total)                      :: 3,053
            Genes (coding)                    :: 2,976
            CDSs (with protein)               :: 2,976
            Genes (RNA)                       :: 74
            rRNAs                             :: 3, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2, 4 (5S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 17 of 77
            Pseudo Genes (incomplete)         :: 60 of 77
            Pseudo Genes (internal stop)      :: 6 of 77
            Pseudo Genes (multiple problems)  :: 5 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3122956
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="HO42"
                     /isolation_source="emergency surface"
                     /db_xref="taxon:1351"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2025-06-10"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOW010000001-JBTXOW010000090
WGS_SCAFLD  NZ_JBTXOW010000001-NZ_JBTXOW010000090
//
LOCUS       NZ_JBTXPA010000000   3122697 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecalis strain HO38, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXPA000000000
VERSION     NZ_JBTXPA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798549
            Assembly: GCF_056865705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 3122697)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXPA000000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JBTXPA000000000.  This version of the
            project (01) has the accession number NZ_JBTXPA010000000, and
            consists of sequences JBTXPA010000001-JBTXPA010000088.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865705.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:52:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,128
            CDSs (total)                      :: 3,054
            Genes (coding)                    :: 2,978
            CDSs (with protein)               :: 2,978
            Genes (RNA)                       :: 74
            rRNAs                             :: 3, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2, 4 (5S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 17 of 76
            Pseudo Genes (incomplete)         :: 58 of 76
            Pseudo Genes (internal stop)      :: 6 of 76
            Pseudo Genes (multiple problems)  :: 4 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3122697
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="HO38"
                     /isolation_source="emergency surface"
                     /db_xref="taxon:1351"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2025-06-10"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXPA010000001-JBTXPA010000088
WGS_SCAFLD  NZ_JBTXPA010000001-NZ_JBTXPA010000088
//
LOCUS       NZ_JBTXOU010000000   2973895 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecalis strain HO44, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOU000000000
VERSION     NZ_JBTXOU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798555
            Assembly: GCF_056865505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2973895)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOU000000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JBTXOU000000000.  This version of the
            project (01) has the accession number NZ_JBTXOU010000000, and
            consists of sequences JBTXOU010000001-JBTXOU010000089.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865505.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:53:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,948
            CDSs (total)                      :: 2,882
            Genes (coding)                    :: 2,807
            CDSs (with protein)               :: 2,807
            Genes (RNA)                       :: 66
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 18 of 75
            Pseudo Genes (incomplete)         :: 51 of 75
            Pseudo Genes (internal stop)      :: 15 of 75
            Pseudo Genes (multiple problems)  :: 6 of 75
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2973895
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="HO44"
                     /isolation_source="emergency surface"
                     /db_xref="taxon:1351"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2025-06-10"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOU010000001-JBTXOU010000089
WGS_SCAFLD  NZ_JBTXOU010000001-NZ_JBTXOU010000089
//
LOCUS       NZ_JBTXOO010000000   2890438 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecalis strain A57_3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOO000000000
VERSION     NZ_JBTXOO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798562
            Assembly: GCF_056865315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2890438)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOO000000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JBTXOO000000000.  This version of the
            project (01) has the accession number NZ_JBTXOO010000000, and
            consists of sequences JBTXOO010000001-JBTXOO010000090.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865315.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:30:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,847
            CDSs (total)                      :: 2,794
            Genes (coding)                    :: 2,726
            CDSs (with protein)               :: 2,726
            Genes (RNA)                       :: 53
            rRNAs                             :: 3, 2 (5S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 23 of 68
            Pseudo Genes (incomplete)         :: 40 of 68
            Pseudo Genes (internal stop)      :: 8 of 68
            Pseudo Genes (multiple problems)  :: 3 of 68
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2890438
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="A57_3"
                     /isolation_source="emergency surface"
                     /db_xref="taxon:1351"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOO010000001-JBTXOO010000090
WGS_SCAFLD  NZ_JBTXOO010000001-NZ_JBTXOO010000090
//
LOCUS       NZ_JBTXPF010000000   3085966 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecalis strain HO33, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXPF000000000
VERSION     NZ_JBTXPF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798544
            Assembly: GCF_056865875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 3085966)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXPF000000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JBTXPF000000000.  This version of the
            project (01) has the accession number NZ_JBTXPF010000000, and
            consists of sequences JBTXPF010000001-JBTXPF010000084.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865875.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:52:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,086
            CDSs (total)                      :: 3,019
            Genes (coding)                    :: 2,941
            CDSs (with protein)               :: 2,941
            Genes (RNA)                       :: 67
            rRNAs                             :: 3, 2 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 2 (5S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 18 of 78
            Pseudo Genes (incomplete)         :: 58 of 78
            Pseudo Genes (internal stop)      :: 7 of 78
            Pseudo Genes (multiple problems)  :: 4 of 78
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3085966
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="HO33"
                     /isolation_source="emergency surface"
                     /db_xref="taxon:1351"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2025-06-10"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXPF010000001-JBTXPF010000084
WGS_SCAFLD  NZ_JBTXPF010000001-NZ_JBTXPF010000084
//
LOCUS       NZ_JBTXNO010000000   2765134 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A103_7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXNO000000000
VERSION     NZ_JBTXNO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798588
            Assembly: GCF_056863155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2765134)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXNO000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXNO000000000.  This version of the project
            (01) has the accession number NZ_JBTXNO010000000, and consists of
            sequences JBTXNO010000001-JBTXNO010000159.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863155.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:56:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,760
            CDSs (total)                      :: 2,691
            Genes (coding)                    :: 2,563
            CDSs (with protein)               :: 2,563
            Genes (RNA)                       :: 69
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 40 of 128
            Pseudo Genes (incomplete)         :: 70 of 128
            Pseudo Genes (internal stop)      :: 30 of 128
            Pseudo Genes (multiple problems)  :: 10 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2765134
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A103_7"
                     /isolation_source="outpatient surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2025-03-17"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXNO010000001-JBTXNO010000159
WGS_SCAFLD  NZ_JBTXNO010000001-NZ_JBTXNO010000159
//
LOCUS       NZ_JBTXOL010000000   2993661 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A76_2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXOL000000000
VERSION     NZ_JBTXOL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798565
            Assembly: GCF_056865205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2993661)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXOL000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXOL000000000.  This version of the project
            (01) has the accession number NZ_JBTXOL010000000, and consists of
            sequences JBTXOL010000001-JBTXOL010000197.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056865205.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:34:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,027
            CDSs (total)                      :: 2,953
            Genes (coding)                    :: 2,840
            CDSs (with protein)               :: 2,840
            Genes (RNA)                       :: 74
            rRNAs                             :: 4, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 113
            CDSs (without protein)            :: 113
            Pseudo Genes (ambiguous residues) :: 0 of 113
            Pseudo Genes (frameshifted)       :: 20 of 113
            Pseudo Genes (incomplete)         :: 82 of 113
            Pseudo Genes (internal stop)      :: 22 of 113
            Pseudo Genes (multiple problems)  :: 9 of 113
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2993661
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A76_2"
                     /isolation_source="emergency surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXOL010000001-JBTXOL010000197
WGS_SCAFLD  NZ_JBTXOL010000001-NZ_JBTXOL010000197
//
LOCUS       NZ_JBTXNM010000000   2772999 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A105_5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXNM000000000
VERSION     NZ_JBTXNM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798590
            Assembly: GCF_056863075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2772999)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXNM000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXNM000000000.  This version of the project
            (01) has the accession number NZ_JBTXNM010000000, and consists of
            sequences JBTXNM010000001-JBTXNM010000191.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863075.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:03:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,791
            CDSs (total)                      :: 2,721
            Genes (coding)                    :: 2,586
            CDSs (with protein)               :: 2,586
            Genes (RNA)                       :: 70
            rRNAs                             :: 3, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 1 (5S, 16S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 135
            CDSs (without protein)            :: 135
            Pseudo Genes (ambiguous residues) :: 0 of 135
            Pseudo Genes (frameshifted)       :: 42 of 135
            Pseudo Genes (incomplete)         :: 76 of 135
            Pseudo Genes (internal stop)      :: 30 of 135
            Pseudo Genes (multiple problems)  :: 11 of 135
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2772999
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A105_5"
                     /isolation_source="outpatient surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2025-03-17"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXNM010000001-JBTXNM010000191
WGS_SCAFLD  NZ_JBTXNM010000001-NZ_JBTXNM010000191
//
LOCUS       NZ_JBTXNS010000000   2789852 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain A94_8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXNS000000000
VERSION     NZ_JBTXNS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798584
            Assembly: GCF_056864485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2789852)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXNS000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JBTXNS000000000.  This version of the project
            (01) has the accession number NZ_JBTXNS010000000, and consists of
            sequences JBTXNS010000001-JBTXNS010000045.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864485.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:23:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,729
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,600
            CDSs (with protein)               :: 2,600
            Genes (RNA)                       :: 64
            rRNAs                             :: 3 (5S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 16 of 65
            Pseudo Genes (incomplete)         :: 45 of 65
            Pseudo Genes (internal stop)      :: 12 of 65
            Pseudo Genes (multiple problems)  :: 6 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2789852
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="A94_8"
                     /isolation_source="outpatient surface"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXNS010000001-JBTXNS010000045
WGS_SCAFLD  NZ_JBTXNS010000001-NZ_JBTXNS010000045
//
LOCUS       NZ_JBTXNV010000000   2804855 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecalis strain A88_3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTXNV000000000
VERSION     NZ_JBTXNV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54798581
            Assembly: GCF_056864595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2804855)
  AUTHORS   Xin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Clinical laboratory, The Second Affliated
            Hospital Zhejiang University School of Medicine, 88, Jiefang Road,
            Shangcheng District, Hangzhou, Zhejiang 31009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTXNV000000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JBTXNV000000000.  This version of the
            project (01) has the accession number NZ_JBTXNV010000000, and
            consists of sequences JBTXNV010000001-JBTXNV010000468.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864595.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:24:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,936
            CDSs (total)                      :: 2,875
            Genes (coding)                    :: 2,738
            CDSs (with protein)               :: 2,738
            Genes (RNA)                       :: 61
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 137
            CDSs (without protein)            :: 137
            Pseudo Genes (ambiguous residues) :: 0 of 137
            Pseudo Genes (frameshifted)       :: 7 of 137
            Pseudo Genes (incomplete)         :: 128 of 137
            Pseudo Genes (internal stop)      :: 2 of 137
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2804855
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="A88_3"
                     /isolation_source="emergency air"
                     /db_xref="taxon:1351"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30.18 N 120.12 E"
                     /collection_date="2024-12-27"
                     /collected_by="The Second Affiliated Hospital Zhejiang
                     University School of Medicine"
WGS         JBTXNV010000001-JBTXNV010000468
WGS_SCAFLD  NZ_JBTXNV010000001-NZ_JBTXNV010000468
//
LOCUS       NZ_JBXFVR010000000   3468644 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Clostridium perfringens strain NM2026-13, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXFVR000000000
VERSION     NZ_JBXFVR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN57228732
            Assembly: GCF_056856715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium perfringens
  ORGANISM  Clostridium perfringens
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (bases 1 to 3468644)
  AUTHORS   Zhao,R. and Wang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-APR-2026) College of Veterinary Medicine, Inner
            Mongolia Agricultural University, No. 29 East Erdos Street, Saihan
            District, Hohhot, Inner Mongolia 010018, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFVR000000000.1.
            The Clostridium perfringens whole genome shotgun (WGS) project has
            the project accession NZ_JBXFVR000000000.  This version of the
            project (01) has the accession number NZ_JBXFVR010000000, and
            consists of sequences JBXFVR010000001-JBXFVR010000006.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-APR-2026
            Assembly Method        :: Flye v. v2.9.1; unicycier v. v0.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1272.0x
            Sequencing Technology  :: Illumina NovaSeq; PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856715.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:50:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,236
            CDSs (total)                      :: 3,107
            Genes (coding)                    :: 3,082
            CDSs (with protein)               :: 3,082
            Genes (RNA)                       :: 129
            rRNAs                             :: 10, 10, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 10, 10, 10 (5S, 16S, 23S)
            tRNAs                             :: 95
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 25
            CDSs (without protein)            :: 25
            Pseudo Genes (ambiguous residues) :: 0 of 25
            Pseudo Genes (frameshifted)       :: 11 of 25
            Pseudo Genes (incomplete)         :: 18 of 25
            Pseudo Genes (internal stop)      :: 7 of 25
            Pseudo Genes (multiple problems)  :: 8 of 25
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3468644
                     /organism="Clostridium perfringens"
                     /mol_type="genomic DNA"
                     /strain="NM2026-13"
                     /isolation_source="bovine intestinal tissue"
                     /host="cattle"
                     /db_xref="taxon:1502"
                     /geo_loc_name="China: Inner Mongolia Autonomous Region,
                     Hohhot"
                     /collection_date="2025"
WGS         JBXFVR010000001-JBXFVR010000006
WGS_SCAFLD  NZ_CM166462
WGS_SCAFLD  NZ_JBXFVR010000002-NZ_JBXFVR010000006
//
LOCUS       NZ_JBXEQI010000000   5210595 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Massilia aurea strain HP4R, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXEQI000000000
VERSION     NZ_JBXEQI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56418702
            Assembly: GCF_056858295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Massilia aurea (Telluria aurea)
  ORGANISM  Massilia aurea
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Massilia.
REFERENCE   1  (bases 1 to 5210595)
  AUTHORS   Haak,D.C.
  TITLE     Emma and Mychala sequence additions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5210595)
  AUTHORS   Haak,D.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2026) Biological Sciences, Virginia Tech, 926
            West Campus Drive, Blacksburg, VA 24061, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEQI000000000.1.
            The Massilia aurea whole genome shotgun (WGS) project has the
            project accession NZ_JBXEQI000000000.  This version of the project
            (01) has the accession number NZ_JBXEQI010000000, and consists of
            sequence JBXEQI010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: MAY-2021
            Assembly Method           :: Canu v. 1
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NA
            Genome Coverage           :: 50x
            Sequencing Technology     :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858295.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:39:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,600
            CDSs (total)                      :: 4,493
            Genes (coding)                    :: 4,473
            CDSs (with protein)               :: 4,473
            Genes (RNA)                       :: 107
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 8 of 20
            Pseudo Genes (incomplete)         :: 16 of 20
            Pseudo Genes (internal stop)      :: 3 of 20
            Pseudo Genes (multiple problems)  :: 7 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5210595
                     /organism="Massilia aurea"
                     /mol_type="genomic DNA"
                     /strain="HP4R"
                     /isolation_source="field"
                     /host="amphibian"
                     /db_xref="taxon:373040"
                     /geo_loc_name="USA: Virginia,Blacksburg"
                     /lat_lon="37.229572 N 80.413840 W"
                     /collection_date="2012"
WGS         JBXEQI010000001
WGS_SCAFLD  NZ_JBXEQI010000001
//
LOCUS       NZ_JBSXOJ010000000   3890628 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paracoccus sp. L-6W, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXOJ000000000
VERSION     NZ_JBSXOJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312089
            Assembly: GCF_056859375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paracoccus sp. L-6W
  ORGANISM  Paracoccus sp. L-6W
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paracoccus.
REFERENCE   1  (bases 1 to 3890628)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXOJ000000000.1.
            The Paracoccus sp. L-6W whole genome shotgun (WGS) project has the
            project accession NZ_JBSXOJ000000000.  This version of the project
            (01) has the accession number NZ_JBSXOJ010000000, and consists of
            sequences JBSXOJ010000001-JBSXOJ010000048.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 308.64x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859375.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:27:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,833
            CDSs (total)                      :: 3,780
            Genes (coding)                    :: 3,719
            CDSs (with protein)               :: 3,719
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 13 of 61
            Pseudo Genes (incomplete)         :: 52 of 61
            Pseudo Genes (internal stop)      :: 8 of 61
            Pseudo Genes (multiple problems)  :: 11 of 61
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3890628
                     /organism="Paracoccus sp. L-6W"
                     /mol_type="genomic DNA"
                     /strain="L-6W"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472708"
                     /geo_loc_name="Indian Ocean: Southwestern Indian Ridge"
                     /lat_lon="37.93805 S 49.26156 E"
                     /collection_date="2024-05"
WGS         JBSXOJ010000001-JBSXOJ010000048
WGS_SCAFLD  NZ_JBSXOJ010000001-NZ_JBSXOJ010000048
//
LOCUS       NZ_JBXGIM010000000   2910297 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Moraxella bovis strain SL18, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGIM000000000
VERSION     NZ_JBXGIM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772363
            Assembly: GCF_056855895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Moraxella bovis
  ORGANISM  Moraxella bovis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 2910297)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGIM000000000.1.
            The Moraxella bovis whole genome shotgun (WGS) project has the
            project accession NZ_JBXGIM000000000.  This version of the project
            (01) has the accession number NZ_JBXGIM010000000, and consists of
            sequences JBXGIM010000001-JBXGIM010000131.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855895.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:51:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,977
            CDSs (total)                      :: 2,926
            Genes (coding)                    :: 2,858
            CDSs (with protein)               :: 2,858
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 20 of 68
            Pseudo Genes (incomplete)         :: 44 of 68
            Pseudo Genes (internal stop)      :: 12 of 68
            Pseudo Genes (multiple problems)  :: 7 of 68
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2910297
                     /organism="Moraxella bovis"
                     /mol_type="genomic DNA"
                     /strain="SL18"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:476"
                     /geo_loc_name="USA: Sidney"
                     /lat_lon="47.71 N 104.16 W"
                     /collection_date="2022-09-25"
WGS         JBXGIM010000001-JBXGIM010000131
WGS_SCAFLD  NZ_JBXGIM010000001-NZ_JBXGIM010000131
//
LOCUS       NZ_JBSXOI010000000   4972238 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Marinobacter sp. L-80, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXOI000000000
VERSION     NZ_JBSXOI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312090
            Assembly: GCF_056859395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marinobacter sp. L-80
  ORGANISM  Marinobacter sp. L-80
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 4972238)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXOI000000000.1.
            The Marinobacter sp. L-80 whole genome shotgun (WGS) project has
            the project accession NZ_JBSXOI000000000.  This version of the
            project (01) has the accession number NZ_JBSXOI010000000, and
            consists of sequences JBSXOI010000001-JBSXOI010000077.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 244.81x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859395.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:40:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,670
            CDSs (total)                      :: 4,613
            Genes (coding)                    :: 4,544
            CDSs (with protein)               :: 4,544
            Genes (RNA)                       :: 57
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 2, 1 (5S, 16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 10 of 69
            Pseudo Genes (incomplete)         :: 59 of 69
            Pseudo Genes (internal stop)      :: 9 of 69
            Pseudo Genes (multiple problems)  :: 7 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4972238
                     /organism="Marinobacter sp. L-80"
                     /mol_type="genomic DNA"
                     /strain="L-80"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472709"
                     /geo_loc_name="Indian Ocean: Southwestern Indian Ridge"
                     /lat_lon="37.93805 S 49.26156 E"
                     /collection_date="2024-05"
WGS         JBSXOI010000001-JBSXOI010000077
WGS_SCAFLD  NZ_JBSXOI010000001-NZ_JBSXOI010000077
//
LOCUS       NZ_JBXEPX010000000   5717037 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Novosphingobium sp. BL-S-32, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXEPX000000000
VERSION     NZ_JBXEPX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53082845
            Assembly: GCF_056857055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Novosphingobium sp. BL-S-32
  ORGANISM  Novosphingobium sp. BL-S-32
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Novosphingobium.
REFERENCE   1  (bases 1 to 5717037)
  AUTHORS   Williams,N.W., Ali,T. and Boudreau,P.D.
  TITLE     Serine Palmitoyltransferase Primers Guide Isolation of
            Sphingomonadales Strains Across Diverse Environments
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5717037)
  AUTHORS   Williams,N.W., Ali,T. and Boudreau,P.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-NOV-2025) BioMolecular Sciences, Boudreau Lab, 405
            Faser Hall, University, MS 38677-1848, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEPX000000000.1.
            The Novosphingobium sp. BL-S-32 whole genome shotgun (WGS) project
            has the project accession NZ_JBXEPX000000000.  This version of the
            project (01) has the accession number NZ_JBXEPX010000000, and
            consists of sequences JBXEPX010000001-JBXEPX010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 05-SEP-2025
            Assembly Method        :: Flye v. 2.9.5-b1801
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 32x
            Sequencing Technology  :: ONT
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857055.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:10:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,146
            CDSs (total)                      :: 5,062
            Genes (coding)                    :: 5,002
            CDSs (with protein)               :: 5,002
            Genes (RNA)                       :: 84
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 20 of 60
            Pseudo Genes (incomplete)         :: 46 of 60
            Pseudo Genes (internal stop)      :: 9 of 60
            Pseudo Genes (multiple problems)  :: 15 of 60
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5717037
                     /organism="Novosphingobium sp. BL-S-32"
                     /mol_type="genomic DNA"
                     /strain="BL-S-32"
                     /isolation_source="topsoil"
                     /db_xref="taxon:3470652"
                     /geo_loc_name="USA: Mississippi, Oxford"
                     /lat_lon="34.3646 N 89.5332 W"
                     /collection_date="2025-06-10"
WGS         JBXEPX010000001-JBXEPX010000002
WGS_SCAFLD  NZ_CM166476-NZ_CM166477
//
LOCUS       NZ_JBXGEE010000000   4651006 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea sp. PA1, whole genome shotgun sequencing project.
ACCESSION   NZ_JBXGEE000000000
VERSION     NZ_JBXGEE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN57263545
            Assembly: GCF_056856975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea sp. PA1
  ORGANISM  Pantoea sp. PA1
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea.
REFERENCE   1  (bases 1 to 4651006)
  AUTHORS   Zhang,Z.
  TITLE     First report of Pantoea anthophila causing brown stripe disease on
            rice in Guangxi, China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4651006)
  AUTHORS   Zhang,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-APR-2026) College of Agriculture; Guangxi Key
            Laboratory of Agro-environment and Agro-product Safety, Guangxi
            University, No. 100, East Daxue Road, Xixiangtang District,
            Nanning, Guangxi 530001, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGEE000000000.1.
            The Pantoea sp. PA1 whole genome shotgun (WGS) project has the
            project accession NZ_JBXGEE000000000.  This version of the project
            (01) has the accession number NZ_JBXGEE010000000, and consists of
            sequences JBXGEE010000001-JBXGEE010000021.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from lab stock.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856975.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:16:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,396
            CDSs (total)                      :: 4,303
            Genes (coding)                    :: 4,260
            CDSs (with protein)               :: 4,260
            Genes (RNA)                       :: 93
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 23S)
            partial rRNAs                     :: 5, 4 (16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 18 of 43
            Pseudo Genes (incomplete)         :: 34 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 17 of 43
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4651006
                     /organism="Pantoea sp. PA1"
                     /mol_type="genomic DNA"
                     /strain="Pa1"
                     /isolation_source="rice"
                     /host="Oryza sativa"
                     /db_xref="taxon:3470467"
                     /geo_loc_name="China: Guangxi"
                     /collection_date="2025"
WGS         JBXGEE010000001-JBXGEE010000021
WGS_SCAFLD  NZ_JBXGEE010000001-NZ_JBXGEE010000021
//
LOCUS       NZ_JBXGIL010000000   2034039 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Moraxella bovoculi strain SL19, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGIL000000000
VERSION     NZ_JBXGIL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772364
            Assembly: GCF_056855875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Moraxella bovoculi
  ORGANISM  Moraxella bovoculi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 2034039)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGIL000000000.1.
            The Moraxella bovoculi whole genome shotgun (WGS) project has the
            project accession NZ_JBXGIL000000000.  This version of the project
            (01) has the accession number NZ_JBXGIL010000000, and consists of
            sequences JBXGIL010000001-JBXGIL010000025.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855875.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:45:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,962
            CDSs (total)                      :: 1,912
            Genes (coding)                    :: 1,864
            CDSs (with protein)               :: 1,864
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 20 of 48
            Pseudo Genes (incomplete)         :: 25 of 48
            Pseudo Genes (internal stop)      :: 17 of 48
            Pseudo Genes (multiple problems)  :: 11 of 48
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2034039
                     /organism="Moraxella bovoculi"
                     /mol_type="genomic DNA"
                     /strain="SL19"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:386891"
                     /geo_loc_name="USA: Sidney"
                     /lat_lon="47.71 N 104.16 W"
                     /collection_date="2022-09-25"
WGS         JBXGIL010000001-JBXGIL010000025
WGS_SCAFLD  NZ_JBXGIL010000001-NZ_JBXGIL010000025
//
LOCUS       NZ_JBXGII010000000   2111597 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Moraxella bovoculi strain SL21, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGII000000000
VERSION     NZ_JBXGII000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772367
            Assembly: GCF_056855795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Moraxella bovoculi
  ORGANISM  Moraxella bovoculi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 2111597)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGII000000000.1.
            The Moraxella bovoculi whole genome shotgun (WGS) project has the
            project accession NZ_JBXGII000000000.  This version of the project
            (01) has the accession number NZ_JBXGII010000000, and consists of
            sequences JBXGII010000001-JBXGII010000030.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855795.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:42:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,062
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 1,948
            CDSs (with protein)               :: 1,948
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 26 of 64
            Pseudo Genes (incomplete)         :: 36 of 64
            Pseudo Genes (internal stop)      :: 17 of 64
            Pseudo Genes (multiple problems)  :: 14 of 64
            CRISPR Arrays                     :: 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2111597
                     /organism="Moraxella bovoculi"
                     /mol_type="genomic DNA"
                     /strain="SL21"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:386891"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2022-12-13"
WGS         JBXGII010000001-JBXGII010000030
WGS_SCAFLD  NZ_JBXGII010000001-NZ_JBXGII010000030
//
LOCUS       NZ_JBXFWW010000000   6469466 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paenibacillus sp. CL36, whole genome shotgun sequencing project.
ACCESSION   NZ_JBXFWW000000000
VERSION     NZ_JBXFWW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN57193758
            Assembly: GCF_056856815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paenibacillus sp. CL36
  ORGANISM  Paenibacillus sp. CL36
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (bases 1 to 6469466)
  AUTHORS   Wu,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2026) College of Life Science, Hebei University,
            No. 180 Wusi East Road, Baoding, Hebei 071002, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFWW000000000.1.
            The Paenibacillus sp. CL36 whole genome shotgun (WGS) project has
            the project accession NZ_JBXFWW000000000.  This version of the
            project (01) has the accession number NZ_JBXFWW010000000, and
            consists of sequence JBXFWW010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: unicycle v. v0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 160x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856815.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:34:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,821
            CDSs (total)                      :: 5,678
            Genes (coding)                    :: 5,638
            CDSs (with protein)               :: 5,638
            Genes (RNA)                       :: 143
            rRNAs                             :: 12, 12, 12 (5S, 16S, 23S)
            complete rRNAs                    :: 12, 12, 12 (5S, 16S, 23S)
            tRNAs                             :: 103
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 40
            CDSs (without protein)            :: 40
            Pseudo Genes (ambiguous residues) :: 0 of 40
            Pseudo Genes (frameshifted)       :: 10 of 40
            Pseudo Genes (incomplete)         :: 28 of 40
            Pseudo Genes (internal stop)      :: 4 of 40
            Pseudo Genes (multiple problems)  :: 1 of 40
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6469466
                     /organism="Paenibacillus sp. CL36"
                     /mol_type="genomic DNA"
                     /strain="CL36"
                     /isolation_source="Solanum rostratum"
                     /db_xref="taxon:3700048"
                     /geo_loc_name="China: Baoding"
                     /collection_date="2024-09-28"
WGS         JBXFWW010000001
WGS_SCAFLD  NZ_CM166466
//
LOCUS       NZ_JBXPJA010000000   4817423 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Parviterribacter kavangonensis strain LMG 26950, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBXPJA000000000
VERSION     NZ_JBXPJA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN57274863
            Assembly: GCF_056863335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Parviterribacter kavangonensis
  ORGANISM  Parviterribacter kavangonensis
            Bacteria; Bacillati; Actinomycetota; Thermoleophilia;
            Solirubrobacterales; Parviterribacteraceae; Parviterribacter.
REFERENCE   1  (bases 1 to 4817423)
  AUTHORS   Li,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2026) Xinjiang Institute of Ecology and
            Geography, Chinese Academy of Sciences, No. 818, Beijing South
            Road, Urumqi, Xinjiang 830000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXPJA000000000.1.
            The Parviterribacter kavangonensis whole genome shotgun (WGS)
            project has the project accession NZ_JBXPJA000000000.  This version
            of the project (01) has the accession number NZ_JBXPJA010000000,
            and consists of sequences JBXPJA010000001-JBXPJA010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1142.7x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863335.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:20:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,736
            CDSs (total)                      :: 4,683
            Genes (coding)                    :: 4,650
            CDSs (with protein)               :: 4,650
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 3 of 33
            Pseudo Genes (incomplete)         :: 31 of 33
            Pseudo Genes (internal stop)      :: 1 of 33
            Pseudo Genes (multiple problems)  :: 2 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4817423
                     /organism="Parviterribacter kavangonensis"
                     /mol_type="genomic DNA"
                     /strain="LMG 26950"
                     /isolation_source="savanna soil [ENVO:00005746]"
                     /type_material="type strain of Parviterribacter
                     kavangonensis"
                     /db_xref="taxon:1640865"
                     /geo_loc_name="Namibia"
                     /lat_lon="18.29 S 19.26 E"
                     /collection_date="2016"
WGS         JBXPJA010000001-JBXPJA010000003
WGS_SCAFLD  NZ_JBXPJA010000001-NZ_JBXPJA010000003
//
LOCUS       NZ_JBXADR010000000   1069212 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mycoplasmopsis bovis strain BC10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXADR000000000
VERSION     NZ_JBXADR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53419869
            Assembly: GCF_056857955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycoplasmopsis bovis (Mycoplasma bovis)
  ORGANISM  Mycoplasmopsis bovis
            Bacteria; Bacillati; Mycoplasmatota; Mycoplasmoidales;
            Metamycoplasmataceae; Mycoplasmopsis.
REFERENCE   1  (bases 1 to 1069212)
  AUTHORS   Nielsen,D.W. and Holthausen,D.J.
  TITLE     Genomic characterization of Mycoplasma bovis, Mannheimia
            haemolytica, and bovine viral diarrhea virus 1 from a bovine
            respiratory disease complex case
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1069212)
  AUTHORS   Nielsen,D.W. and Holthausen,D.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Ruminant Diseases and Immunology Research
            Unit, USDA/ARS/National Animal Disease Center, 1920 Dayton Ave,
            Ames, IA 50010, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXADR000000000.1.
            The Mycoplasmopsis bovis whole genome shotgun (WGS) project has the
            project accession NZ_JBXADR000000000.  This version of the project
            (01) has the accession number NZ_JBXADR010000000, and consists of
            sequence JBXADR010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Daniel Nielsen, 1920 Dayton
            Ave., Ames, IA 50010.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 24-FEB-2025
            Assembly Method        :: Flye v. 2.9.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 2143.0x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857955.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:56:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 926
            CDSs (total)                      :: 883
            Genes (coding)                    :: 839
            CDSs (with protein)               :: 839
            Genes (RNA)                       :: 43
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 23 of 44
            Pseudo Genes (incomplete)         :: 25 of 44
            Pseudo Genes (internal stop)      :: 5 of 44
            Pseudo Genes (multiple problems)  :: 9 of 44
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1069212
                     /organism="Mycoplasmopsis bovis"
                     /mol_type="genomic DNA"
                     /strain="BC10"
                     /isolation_source="lung"
                     /host="bovine"
                     /db_xref="taxon:28903"
                     /geo_loc_name="USA"
                     /collection_date="2020-10-30"
WGS         JBXADR010000001
WGS_SCAFLD  NZ_CM166479
//
LOCUS       NZ_JBXEPG010000000   2748516 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mannheimia haemolytica strain 19BRD-019, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXEPG000000000
VERSION     NZ_JBXEPG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53097271
            Assembly: GCF_056857995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2748516)
  AUTHORS   Lee,G.X.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) School of Biological Science, The
            University of Adelaide, Adelaide, Adelaide SA 5005, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEPG000000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_JBXEPG000000000.  This version of the
            project (01) has the accession number NZ_JBXEPG010000000, and
            consists of sequence JBXEPG010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 26-JUN-2025
            Assembly Method        :: Flye v. 2.9.6
            Assembly Name          :: 19BRD-019
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 311x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857995.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:01:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,859
            CDSs (total)                      :: 2,766
            Genes (coding)                    :: 2,685
            CDSs (with protein)               :: 2,685
            Genes (RNA)                       :: 93
            rRNAs                             :: 8, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 37 of 81
            Pseudo Genes (incomplete)         :: 39 of 81
            Pseudo Genes (internal stop)      :: 9 of 81
            Pseudo Genes (multiple problems)  :: 4 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2748516
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="19BRD-019"
                     /isolation_source="lung"
                     /host="cattle"
                     /db_xref="taxon:75985"
                     /geo_loc_name="Australia: South Australia"
                     /collection_date="2019"
                     /collected_by="ACARE"
WGS         JBXEPG010000001
WGS_SCAFLD  NZ_CM166481
//
LOCUS       NZ_JBSXNM010000000   3890664 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paracoccus sp. L-17, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXNM000000000
VERSION     NZ_JBSXNM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312074
            Assembly: GCF_056857655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paracoccus sp. L-17
  ORGANISM  Paracoccus sp. L-17
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paracoccus.
REFERENCE   1  (bases 1 to 3890664)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXNM000000000.1.
            The Paracoccus sp. L-17 whole genome shotgun (WGS) project has the
            project accession NZ_JBSXNM000000000.  This version of the project
            (01) has the accession number NZ_JBSXNM010000000, and consists of
            sequences JBSXNM010000001-JBSXNM010000046.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 326.48x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857655.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:10:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,836
            CDSs (total)                      :: 3,783
            Genes (coding)                    :: 3,723
            CDSs (with protein)               :: 3,723
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 12 of 60
            Pseudo Genes (incomplete)         :: 50 of 60
            Pseudo Genes (internal stop)      :: 8 of 60
            Pseudo Genes (multiple problems)  :: 9 of 60
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3890664
                     /organism="Paracoccus sp. L-17"
                     /mol_type="genomic DNA"
                     /strain="L-17"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472693"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.71773 N 63.86117 E"
                     /collection_date="2022-06"
WGS         JBSXNM010000001-JBSXNM010000046
WGS_SCAFLD  NZ_JBSXNM010000001-NZ_JBSXNM010000046
//
LOCUS       NZ_CBAICG010000000   3836904 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Solirhodobacter sp. isolate
            PELAGICS-MAG-x7-bin055808-FUSWH-SM-16jul20., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBAICG000000000
VERSION     NZ_CBAICG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117450832
            Assembly: GCF_964715405.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Solirhodobacter sp. (freshwater metagenome)
  ORGANISM  Solirhodobacter sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Solirhodobacter.
REFERENCE   1  (bases 1 to 3836904)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-DEC-2024) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBAICG000000000.1.
            The Solirhodobacter sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBAICG000000000.  This version of the project
            (01) has the accession number NZ_CBAICG010000000, and consists of
            sequences CBAICG010000001-CBAICG010000093.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964715405.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 01:32:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,851
            CDSs (total)                      :: 3,808
            Genes (coding)                    :: 3,741
            CDSs (with protein)               :: 3,741
            Genes (RNA)                       :: 43
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 19 of 67
            Pseudo Genes (incomplete)         :: 56 of 67
            Pseudo Genes (internal stop)      :: 11 of 67
            Pseudo Genes (multiple problems)  :: 17 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3836904
                     /organism="Solirhodobacter sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-x7-bin055808-FUSWH-SM-16jul20."
                     /isolation_source="Grosse Fuchskuhle SW lake"
                     /db_xref="taxon:2661808"
                     /environmental_sample
                     /geo_loc_name="Germany"
                     /collection_date="2020-07-16"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBAICG010000001-CBAICG010000093
WGS_SCAFLD  NZ_CBAICG010000001-NZ_CBAICG010000093
//
LOCUS       NZ_JBXPIZ010000000   5687744 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Parviterribacter multiflagellatus strain LMG 26949, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBXPIZ000000000
VERSION     NZ_JBXPIZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN57274864
            Assembly: GCF_056863265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Parviterribacter multiflagellatus
  ORGANISM  Parviterribacter multiflagellatus
            Bacteria; Bacillati; Actinomycetota; Thermoleophilia;
            Solirubrobacterales; Parviterribacteraceae; Parviterribacter.
REFERENCE   1  (bases 1 to 5687744)
  AUTHORS   Li,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2026) Xinjiang Institute of Ecology and
            Geography, Chinese Academy of Sciences, No. 818, Beijing South
            Road, Urumqi, Xinjiang 830000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXPIZ000000000.1.
            The Parviterribacter multiflagellatus whole genome shotgun (WGS)
            project has the project accession NZ_JBXPIZ000000000.  This version
            of the project (01) has the accession number NZ_JBXPIZ010000000,
            and consists of sequences JBXPIZ010000001-JBXPIZ010000018.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 936.9x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863265.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 18:25:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,549
            CDSs (total)                      :: 5,497
            Genes (coding)                    :: 5,464
            CDSs (with protein)               :: 5,464
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 3 of 33
            Pseudo Genes (incomplete)         :: 31 of 33
            Pseudo Genes (internal stop)      :: 1 of 33
            Pseudo Genes (multiple problems)  :: 2 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5687744
                     /organism="Parviterribacter multiflagellatus"
                     /mol_type="genomic DNA"
                     /strain="LMG 26949"
                     /isolation_source="savanna soil [ENVO:00005746]"
                     /type_material="type strain of Parviterribacter
                     multiflagellatus"
                     /db_xref="taxon:1640866"
                     /geo_loc_name="Namibia"
                     /lat_lon="18.29 S 19.26 E"
                     /collection_date="2016"
WGS         JBXPIZ010000001-JBXPIZ010000018
WGS_SCAFLD  NZ_JBXPIZ010000001-NZ_JBXPIZ010000018
//
LOCUS       NZ_JBXGIS010000000   2917354 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Moraxella bovis strain SL11, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGIS000000000
VERSION     NZ_JBXGIS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772357
            Assembly: GCF_056856015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Moraxella bovis
  ORGANISM  Moraxella bovis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 2917354)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGIS000000000.1.
            The Moraxella bovis whole genome shotgun (WGS) project has the
            project accession NZ_JBXGIS000000000.  This version of the project
            (01) has the accession number NZ_JBXGIS010000000, and consists of
            sequences JBXGIS010000001-JBXGIS010000131.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856015.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:03:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,987
            CDSs (total)                      :: 2,936
            Genes (coding)                    :: 2,870
            CDSs (with protein)               :: 2,870
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 19 of 66
            Pseudo Genes (incomplete)         :: 42 of 66
            Pseudo Genes (internal stop)      :: 12 of 66
            Pseudo Genes (multiple problems)  :: 6 of 66
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2917354
                     /organism="Moraxella bovis"
                     /mol_type="genomic DNA"
                     /strain="SL11"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:476"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2023-05-15"
WGS         JBXGIS010000001-JBXGIS010000131
WGS_SCAFLD  NZ_JBXGIS010000001-NZ_JBXGIS010000131
//
LOCUS       NZ_AJQN01000000      6580016 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Sinorhizobium fredii CCBAU 25509, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AJQN00000000
VERSION     NZ_AJQN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02469478
            Assembly: GCF_000261865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium fredii CCBAU 25509
  ORGANISM  Sinorhizobium fredii CCBAU 25509
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 6580016)
  AUTHORS   Tian,C.F., Zhou,Y.J., Zhang,Y.M., Li,Q.Q., Zhang,Y.Z., Li,D.F.,
            Wang,S., Wang,J., Gilbert,L.B., Li,Y.R. and Chen,W.X.
  TITLE     Comparative genomics of rhizobia nodulating soybean suggests
            extensive recruitment of lineage-specific genes in adaptations
  JOURNAL   Proc Natl Acad Sci U S A 109 (22), 8629-8634 (2012)
   PUBMED   22586130
REFERENCE   2  (bases 1 to 6580016)
  AUTHORS   Tian,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-DEC-2011) College of Biological Sciences, China
            Agricultural University, Room No. 1017, Center for Life Sciences,
            Yuanmingyuan Xilu No. 2, Haidian district, Beijing 100193, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AJQN00000000.1.
            The Sinorhizobium fredii CCBAU 25509 whole genome shotgun (WGS)
            project has the project accession NZ_AJQN00000000.  This version of
            the project (01) has the accession number NZ_AJQN01000000, and
            consists of sequences AJQN01000001-AJQN01000443.
            Source DNA available from CCBAU at China Agricultural University.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 1.05
            Assembly Name         :: 25509
            Genome Coverage       :: 151x
            Sequencing Technology :: Illumina HiSeq2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000261865.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:30:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,483
            CDSs (total)                      :: 6,426
            Genes (coding)                    :: 6,086
            CDSs (with protein)               :: 6,086
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 340
            CDSs (without protein)            :: 340
            Pseudo Genes (ambiguous residues) :: 0 of 340
            Pseudo Genes (frameshifted)       :: 154 of 340
            Pseudo Genes (incomplete)         :: 226 of 340
            Pseudo Genes (internal stop)      :: 25 of 340
            Pseudo Genes (multiple problems)  :: 59 of 340
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6580016
                     /organism="Sinorhizobium fredii CCBAU 25509"
                     /mol_type="genomic DNA"
                     /strain="CCBAU 25509"
                     /host="Glycine max"
                     /db_xref="taxon:1128330"
                     /geo_loc_name="China"
WGS         AJQN01000001-AJQN01000443
WGS_SCAFLD  NZ_AJQN01000001-NZ_AJQN01000443
//
LOCUS       NZ_JBWPVL010000000   3216724 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methylophaga sp. F7, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWPVL000000000
VERSION     NZ_JBWPVL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56733001
            Assembly: GCF_056863975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Methylophaga sp. F7
  ORGANISM  Methylophaga sp. F7
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Thiotrichales; Piscirickettsiaceae; Methylophaga.
REFERENCE   1  (bases 1 to 3216724)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2026) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWPVL000000000.1.
            The Methylophaga sp. F7 whole genome shotgun (WGS) project has the
            project accession NZ_JBWPVL000000000.  This version of the project
            (01) has the accession number NZ_JBWPVL010000000, and consists of
            sequences JBWPVL010000001-JBWPVL010000002.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1290.0x
            Sequencing Technology  :: Illumina; PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863975.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:41:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,230
            CDSs (total)                      :: 3,176
            Genes (coding)                    :: 3,078
            CDSs (with protein)               :: 3,078
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 98
            CDSs (without protein)            :: 98
            Pseudo Genes (ambiguous residues) :: 0 of 98
            Pseudo Genes (frameshifted)       :: 77 of 98
            Pseudo Genes (incomplete)         :: 33 of 98
            Pseudo Genes (internal stop)      :: 6 of 98
            Pseudo Genes (multiple problems)  :: 18 of 98
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3216724
                     /organism="Methylophaga sp. F7"
                     /mol_type="genomic DNA"
                     /strain="F7"
                     /isolation_source="long-term mineral-interacting microbial
                     enrichment culture inoculated with deep-sea hydrothermal
                     sediment"
                     /db_xref="taxon:3697136"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.71773 N 63.86117 E"
                     /collection_date="2022-06"
WGS         JBWPVL010000001-JBWPVL010000002
WGS_SCAFLD  NZ_CM166511
WGS_SCAFLD  NZ_JBWPVL010000002
//
LOCUS       NZ_AJQP01000000      6567745 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Sinorhizobium fredii CCBAU 83622, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AJQP00000000
VERSION     NZ_AJQP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02469480
            Assembly: GCF_000261905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium fredii CCBAU 83622
  ORGANISM  Sinorhizobium fredii CCBAU 83622
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 6567745)
  AUTHORS   Tian,C.F., Zhou,Y.J., Zhang,Y.M., Li,Q.Q., Zhang,Y.Z., Li,D.F.,
            Wang,S., Wang,J., Gilbert,L.B., Li,Y.R. and Chen,W.X.
  TITLE     Comparative genomics of rhizobia nodulating soybean suggests
            extensive recruitment of lineage-specific genes in adaptations
  JOURNAL   Proc Natl Acad Sci U S A 109 (22), 8629-8634 (2012)
   PUBMED   22586130
REFERENCE   2  (bases 1 to 6567745)
  AUTHORS   Tian,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-DEC-2011) College of Biological Sciences, China
            Agricultural University, Room No. 1017, Center for Life Sciences,
            Yuanmingyuan Xilu No. 2, Haidian district, Beijing 100193, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AJQP00000000.1.
            The Sinorhizobium fredii CCBAU 83622 whole genome shotgun (WGS)
            project has the project accession NZ_AJQP00000000.  This version of
            the project (01) has the accession number NZ_AJQP01000000, and
            consists of sequences AJQP01000001-AJQP01000401.
            Source DNA available from CCBAU at China Agricultural University.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 1.05
            Assembly Name         :: 83622
            Genome Coverage       :: 161x
            Sequencing Technology :: Illumina HiSeq2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000261905.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:38:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,459
            CDSs (total)                      :: 6,401
            Genes (coding)                    :: 6,092
            CDSs (with protein)               :: 6,092
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 309
            CDSs (without protein)            :: 309
            Pseudo Genes (ambiguous residues) :: 0 of 309
            Pseudo Genes (frameshifted)       :: 138 of 309
            Pseudo Genes (incomplete)         :: 226 of 309
            Pseudo Genes (internal stop)      :: 23 of 309
            Pseudo Genes (multiple problems)  :: 72 of 309
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6567745
                     /organism="Sinorhizobium fredii CCBAU 83622"
                     /mol_type="genomic DNA"
                     /strain="CCBAU 83622"
                     /host="Glycine max"
                     /db_xref="taxon:1128332"
                     /geo_loc_name="China"
WGS         AJQP01000001-AJQP01000401
WGS_SCAFLD  NZ_AJQP01000001-NZ_AJQP01000401
//
LOCUS       NZ_JBSXNQ010000000   4513383 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Marinobacter sp. L-13, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXNQ000000000
VERSION     NZ_JBSXNQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312070
            Assembly: GCF_056857715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marinobacter sp. L-13
  ORGANISM  Marinobacter sp. L-13
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 4513383)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXNQ000000000.1.
            The Marinobacter sp. L-13 whole genome shotgun (WGS) project has
            the project accession NZ_JBSXNQ000000000.  This version of the
            project (01) has the accession number NZ_JBSXNQ010000000, and
            consists of sequences JBSXNQ010000001-JBSXNQ010000069.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 257.28x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857715.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:19:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,204
            CDSs (total)                      :: 4,148
            Genes (coding)                    :: 4,097
            CDSs (with protein)               :: 4,097
            Genes (RNA)                       :: 56
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 16 of 51
            Pseudo Genes (incomplete)         :: 42 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 10 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4513383
                     /organism="Marinobacter sp. L-13"
                     /mol_type="genomic DNA"
                     /strain="L-13"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472689"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.69187 N 63.83227 E"
                     /collection_date="2022-06"
WGS         JBSXNQ010000001-JBSXNQ010000069
WGS_SCAFLD  NZ_JBSXNQ010000001-NZ_JBSXNQ010000069
//
LOCUS       NZ_JBXGIJ010000000   2033977 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Moraxella bovoculi strain SL20, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGIJ000000000
VERSION     NZ_JBXGIJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772366
            Assembly: GCF_056855835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Moraxella bovoculi
  ORGANISM  Moraxella bovoculi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 2033977)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGIJ000000000.1.
            The Moraxella bovoculi whole genome shotgun (WGS) project has the
            project accession NZ_JBXGIJ000000000.  This version of the project
            (01) has the accession number NZ_JBXGIJ010000000, and consists of
            sequences JBXGIJ010000001-JBXGIJ010000024.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855835.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:59:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,963
            CDSs (total)                      :: 1,912
            Genes (coding)                    :: 1,863
            CDSs (with protein)               :: 1,863
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 20 of 49
            Pseudo Genes (incomplete)         :: 26 of 49
            Pseudo Genes (internal stop)      :: 17 of 49
            Pseudo Genes (multiple problems)  :: 11 of 49
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2033977
                     /organism="Moraxella bovoculi"
                     /mol_type="genomic DNA"
                     /strain="SL20"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:386891"
                     /geo_loc_name="USA"
                     /collection_date="2022-12-17"
WGS         JBXGIJ010000001-JBXGIJ010000024
WGS_SCAFLD  NZ_JBXGIJ010000001-NZ_JBXGIJ010000024
//
LOCUS       NZ_JBXGIN010000000   2012739 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Moraxella bovoculi strain SL17, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGIN000000000
VERSION     NZ_JBXGIN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772362
            Assembly: GCF_056855915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Moraxella bovoculi
  ORGANISM  Moraxella bovoculi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 2012739)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGIN000000000.1.
            The Moraxella bovoculi whole genome shotgun (WGS) project has the
            project accession NZ_JBXGIN000000000.  This version of the project
            (01) has the accession number NZ_JBXGIN010000000, and consists of
            sequences JBXGIN010000001-JBXGIN010000017.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855915.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:45:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,953
            CDSs (total)                      :: 1,902
            Genes (coding)                    :: 1,846
            CDSs (with protein)               :: 1,846
            Genes (RNA)                       :: 51
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 23 of 56
            Pseudo Genes (incomplete)         :: 28 of 56
            Pseudo Genes (internal stop)      :: 23 of 56
            Pseudo Genes (multiple problems)  :: 17 of 56
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2012739
                     /organism="Moraxella bovoculi"
                     /mol_type="genomic DNA"
                     /strain="SL17"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:386891"
                     /geo_loc_name="USA: Jamestown"
                     /lat_lon="46.91 N 98.69 W"
                     /collection_date="2022-08-08"
WGS         JBXGIN010000001-JBXGIN010000017
WGS_SCAFLD  NZ_JBXGIN010000001-NZ_JBXGIN010000017
//
LOCUS       NZ_JBSXOR010000000   3673563 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Marinobacter sp. L-42, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXOR000000000
VERSION     NZ_JBSXOR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312081
            Assembly: GCF_056859555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marinobacter sp. L-42
  ORGANISM  Marinobacter sp. L-42
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 3673563)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXOR000000000.1.
            The Marinobacter sp. L-42 whole genome shotgun (WGS) project has
            the project accession NZ_JBSXOR000000000.  This version of the
            project (01) has the accession number NZ_JBSXOR010000000, and
            consists of sequences JBSXOR010000001-JBSXOR010000095.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 304.28x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859555.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:29:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,488
            CDSs (total)                      :: 3,430
            Genes (coding)                    :: 3,345
            CDSs (with protein)               :: 3,345
            Genes (RNA)                       :: 58
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 44
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 85
            CDSs (without protein)            :: 85
            Pseudo Genes (ambiguous residues) :: 0 of 85
            Pseudo Genes (frameshifted)       :: 20 of 85
            Pseudo Genes (incomplete)         :: 64 of 85
            Pseudo Genes (internal stop)      :: 11 of 85
            Pseudo Genes (multiple problems)  :: 9 of 85
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3673563
                     /organism="Marinobacter sp. L-42"
                     /mol_type="genomic DNA"
                     /strain="L-42"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472700"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.69187 N 63.83227 E"
                     /collection_date="2022-06"
WGS         JBSXOR010000001-JBSXOR010000095
WGS_SCAFLD  NZ_JBSXOR010000001-NZ_JBSXOR010000095
//
LOCUS       NZ_JBSXOG010000000   3174463 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methylophaga sp. F-7, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXOG000000000
VERSION     NZ_JBSXOG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312054
            Assembly: GCF_056859335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Methylophaga sp. F-7
  ORGANISM  Methylophaga sp. F-7
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Thiotrichales; Piscirickettsiaceae; Methylophaga.
REFERENCE   1  (bases 1 to 3174463)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXOG000000000.1.
            The Methylophaga sp. F-7 whole genome shotgun (WGS) project has the
            project accession NZ_JBSXOG000000000.  This version of the project
            (01) has the accession number NZ_JBSXOG010000000, and consists of
            sequences JBSXOG010000001-JBSXOG010000025.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 357.84x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859335.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:16:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,102
            CDSs (total)                      :: 3,056
            Genes (coding)                    :: 3,032
            CDSs (with protein)               :: 3,032
            Genes (RNA)                       :: 46
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 7 of 24
            Pseudo Genes (incomplete)         :: 16 of 24
            Pseudo Genes (internal stop)      :: 3 of 24
            Pseudo Genes (multiple problems)  :: 2 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3174463
                     /organism="Methylophaga sp. F-7"
                     /mol_type="genomic DNA"
                     /strain="F-7"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472673"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.71773 N 63.86117 E"
                     /collection_date="2022-06"
WGS         JBSXOG010000001-JBSXOG010000025
WGS_SCAFLD  NZ_JBSXOG010000001-NZ_JBSXOG010000025
//
LOCUS       NZ_JBXFWY010000000   6469430 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paenibacillus sp. G34, whole genome shotgun sequencing project.
ACCESSION   NZ_JBXFWY000000000
VERSION     NZ_JBXFWY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN57193756
            Assembly: GCF_056856875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paenibacillus sp. G34
  ORGANISM  Paenibacillus sp. G34
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (bases 1 to 6469430)
  AUTHORS   Wu,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2026) College of Life Science, Hebei University,
            No. 180 Wusi East Road, Baoding, Hebei 071002, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFWY000000000.1.
            The Paenibacillus sp. G34 whole genome shotgun (WGS) project has
            the project accession NZ_JBXFWY000000000.  This version of the
            project (01) has the accession number NZ_JBXFWY010000000, and
            consists of sequence JBXFWY010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: flye v. v2.9.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 220x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856875.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:24:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,815
            CDSs (total)                      :: 5,672
            Genes (coding)                    :: 5,632
            CDSs (with protein)               :: 5,632
            Genes (RNA)                       :: 143
            rRNAs                             :: 12, 12, 12 (5S, 16S, 23S)
            complete rRNAs                    :: 12, 12, 12 (5S, 16S, 23S)
            tRNAs                             :: 103
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 40
            CDSs (without protein)            :: 40
            Pseudo Genes (ambiguous residues) :: 0 of 40
            Pseudo Genes (frameshifted)       :: 10 of 40
            Pseudo Genes (incomplete)         :: 28 of 40
            Pseudo Genes (internal stop)      :: 4 of 40
            Pseudo Genes (multiple problems)  :: 1 of 40
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6469430
                     /organism="Paenibacillus sp. G34"
                     /mol_type="genomic DNA"
                     /strain="G34"
                     /isolation_source="Bidens pilosa"
                     /db_xref="taxon:3700047"
                     /geo_loc_name="China: Baoding"
                     /collection_date="2024-11-16"
WGS         JBXFWY010000001
WGS_SCAFLD  NZ_CM166469
//
LOCUS       NZ_JBXGHR010000000   2787484 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Moraxella bovis strain SL7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGHR000000000
VERSION     NZ_JBXGHR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772384
            Assembly: GCF_056855475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Moraxella bovis
  ORGANISM  Moraxella bovis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 2787484)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGHR000000000.1.
            The Moraxella bovis whole genome shotgun (WGS) project has the
            project accession NZ_JBXGHR000000000.  This version of the project
            (01) has the accession number NZ_JBXGHR010000000, and consists of
            sequences JBXGHR010000001-JBXGHR010000118.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855475.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:48:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,817
            CDSs (total)                      :: 2,765
            Genes (coding)                    :: 2,697
            CDSs (with protein)               :: 2,697
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 21 of 68
            Pseudo Genes (incomplete)         :: 39 of 68
            Pseudo Genes (internal stop)      :: 15 of 68
            Pseudo Genes (multiple problems)  :: 6 of 68
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2787484
                     /organism="Moraxella bovis"
                     /mol_type="genomic DNA"
                     /strain="SL7"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:476"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2023-02-13"
WGS         JBXGHR010000001-JBXGHR010000118
WGS_SCAFLD  NZ_JBXGHR010000001-NZ_JBXGHR010000118
//
LOCUS       NZ_JBXGIK010000000   2033975 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Moraxella bovoculi strain SL2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGIK000000000
VERSION     NZ_JBXGIK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772365
            Assembly: GCF_056855855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Moraxella bovoculi
  ORGANISM  Moraxella bovoculi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 2033975)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGIK000000000.1.
            The Moraxella bovoculi whole genome shotgun (WGS) project has the
            project accession NZ_JBXGIK000000000.  This version of the project
            (01) has the accession number NZ_JBXGIK010000000, and consists of
            sequences JBXGIK010000001-JBXGIK010000024.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855855.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:43:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,964
            CDSs (total)                      :: 1,913
            Genes (coding)                    :: 1,864
            CDSs (with protein)               :: 1,864
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 21 of 49
            Pseudo Genes (incomplete)         :: 26 of 49
            Pseudo Genes (internal stop)      :: 17 of 49
            Pseudo Genes (multiple problems)  :: 12 of 49
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2033975
                     /organism="Moraxella bovoculi"
                     /mol_type="genomic DNA"
                     /strain="SL2"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:386891"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2022-12-17"
WGS         JBXGIK010000001-JBXGIK010000024
WGS_SCAFLD  NZ_JBXGIK010000001-NZ_JBXGIK010000024
//
LOCUS       NZ_JBSXOC010000000   3839146 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paracoccus sp. B-1, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXOC000000000
VERSION     NZ_JBSXOC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312058
            Assembly: GCF_056859275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paracoccus sp. B-1
  ORGANISM  Paracoccus sp. B-1
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paracoccus.
REFERENCE   1  (bases 1 to 3839146)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXOC000000000.1.
            The Paracoccus sp. B-1 whole genome shotgun (WGS) project has the
            project accession NZ_JBSXOC000000000.  This version of the project
            (01) has the accession number NZ_JBSXOC010000000, and consists of
            sequences JBSXOC010000001-JBSXOC010000060.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 331.42x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859275.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:30:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,826
            CDSs (total)                      :: 3,776
            Genes (coding)                    :: 3,699
            CDSs (with protein)               :: 3,699
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 16 of 77
            Pseudo Genes (incomplete)         :: 72 of 77
            Pseudo Genes (internal stop)      :: 4 of 77
            Pseudo Genes (multiple problems)  :: 14 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3839146
                     /organism="Paracoccus sp. B-1"
                     /mol_type="genomic DNA"
                     /strain="B-1"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472677"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.70368 N 63.83797 E"
                     /collection_date="2022-06"
WGS         JBSXOC010000001-JBSXOC010000060
WGS_SCAFLD  NZ_JBSXOC010000001-NZ_JBSXOC010000060
//
LOCUS       NZ_JBXGIF010000000   2097174 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Moraxella bovoculi strain SL24, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGIF000000000
VERSION     NZ_JBXGIF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772370
            Assembly: GCF_056855755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Moraxella bovoculi
  ORGANISM  Moraxella bovoculi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 2097174)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGIF000000000.1.
            The Moraxella bovoculi whole genome shotgun (WGS) project has the
            project accession NZ_JBXGIF000000000.  This version of the project
            (01) has the accession number NZ_JBXGIF010000000, and consists of
            sequences JBXGIF010000001-JBXGIF010000027.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855755.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:46:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,047
            CDSs (total)                      :: 1,996
            Genes (coding)                    :: 1,936
            CDSs (with protein)               :: 1,936
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 25 of 60
            Pseudo Genes (incomplete)         :: 32 of 60
            Pseudo Genes (internal stop)      :: 17 of 60
            Pseudo Genes (multiple problems)  :: 13 of 60
            CRISPR Arrays                     :: 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097174
                     /organism="Moraxella bovoculi"
                     /mol_type="genomic DNA"
                     /strain="SL24"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:386891"
                     /geo_loc_name="USA: Sidney"
                     /lat_lon="47.71 N 104.16 W"
                     /collection_date="2022-09-25"
WGS         JBXGIF010000001-JBXGIF010000027
WGS_SCAFLD  NZ_JBXGIF010000001-NZ_JBXGIF010000027
//
LOCUS       NZ_JBXGIH010000000   2088420 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Moraxella bovoculi strain SL22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGIH000000000
VERSION     NZ_JBXGIH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772368
            Assembly: GCF_056855815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Moraxella bovoculi
  ORGANISM  Moraxella bovoculi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 2088420)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGIH000000000.1.
            The Moraxella bovoculi whole genome shotgun (WGS) project has the
            project accession NZ_JBXGIH000000000.  This version of the project
            (01) has the accession number NZ_JBXGIH010000000, and consists of
            sequences JBXGIH010000001-JBXGIH010000030.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855815.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:55:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,070
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,958
            CDSs (with protein)               :: 1,958
            Genes (RNA)                       :: 53
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 27 of 59
            Pseudo Genes (incomplete)         :: 32 of 59
            Pseudo Genes (internal stop)      :: 14 of 59
            Pseudo Genes (multiple problems)  :: 12 of 59
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2088420
                     /organism="Moraxella bovoculi"
                     /mol_type="genomic DNA"
                     /strain="SL22"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:386891"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2023-08-01"
WGS         JBXGIH010000001-JBXGIH010000030
WGS_SCAFLD  NZ_JBXGIH010000001-NZ_JBXGIH010000030
//
LOCUS       NZ_JBSXOO010000000   3888801 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paracoccus sp. L-5, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXOO000000000
VERSION     NZ_JBSXOO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312084
            Assembly: GCF_056859515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paracoccus sp. L-5
  ORGANISM  Paracoccus sp. L-5
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paracoccus.
REFERENCE   1  (bases 1 to 3888801)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXOO000000000.1.
            The Paracoccus sp. L-5 whole genome shotgun (WGS) project has the
            project accession NZ_JBSXOO000000000.  This version of the project
            (01) has the accession number NZ_JBSXOO010000000, and consists of
            sequences JBSXOO010000001-JBSXOO010000049.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 312.03x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859515.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:25:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,822
            CDSs (total)                      :: 3,769
            Genes (coding)                    :: 3,709
            CDSs (with protein)               :: 3,709
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 12 of 60
            Pseudo Genes (incomplete)         :: 50 of 60
            Pseudo Genes (internal stop)      :: 8 of 60
            Pseudo Genes (multiple problems)  :: 9 of 60
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3888801
                     /organism="Paracoccus sp. L-5"
                     /mol_type="genomic DNA"
                     /strain="L-5"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472703"
                     /geo_loc_name="Indian Ocean: Southwestern Indian Ridge"
                     /lat_lon="37.91465 S 49.28191 E"
                     /collection_date="2024-05"
WGS         JBSXOO010000001-JBSXOO010000049
WGS_SCAFLD  NZ_JBSXOO010000001-NZ_JBSXOO010000049
//
LOCUS       NZ_JBXGIT010000000   2028097 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Moraxella bovoculi strain SL10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGIT000000000
VERSION     NZ_JBXGIT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772356
            Assembly: GCF_056856055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Moraxella bovoculi
  ORGANISM  Moraxella bovoculi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 2028097)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGIT000000000.1.
            The Moraxella bovoculi whole genome shotgun (WGS) project has the
            project accession NZ_JBXGIT000000000.  This version of the project
            (01) has the accession number NZ_JBXGIT010000000, and consists of
            sequences JBXGIT010000001-JBXGIT010000014.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856055.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:55:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,949
            CDSs (total)                      :: 1,899
            Genes (coding)                    :: 1,846
            CDSs (with protein)               :: 1,846
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 25 of 53
            Pseudo Genes (incomplete)         :: 26 of 53
            Pseudo Genes (internal stop)      :: 15 of 53
            Pseudo Genes (multiple problems)  :: 11 of 53
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2028097
                     /organism="Moraxella bovoculi"
                     /mol_type="genomic DNA"
                     /strain="SL10"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:386891"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2023-05-15"
WGS         JBXGIT010000001-JBXGIT010000014
WGS_SCAFLD  NZ_JBXGIT010000001-NZ_JBXGIT010000014
//
LOCUS       NZ_JBXEPH010000000   2690638 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mannheimia haemolytica strain 19BRD-084, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXEPH000000000
VERSION     NZ_JBXEPH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53097272
            Assembly: GCF_056858015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2690638)
  AUTHORS   Lee,G.X.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) School of Biological Science, The
            University of Adelaide, Adelaide, Adelaide SA 5005, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEPH000000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_JBXEPH000000000.  This version of the
            project (01) has the accession number NZ_JBXEPH010000000, and
            consists of sequence JBXEPH010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 26-JUN-2025
            Assembly Method        :: Flye v. 2.9.6
            Assembly Name          :: 19BRD-084
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 317x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858015.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:06:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,782
            CDSs (total)                      :: 2,691
            Genes (coding)                    :: 2,605
            CDSs (with protein)               :: 2,605
            Genes (RNA)                       :: 91
            rRNAs                             :: 8, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 86
            CDSs (without protein)            :: 86
            Pseudo Genes (ambiguous residues) :: 0 of 86
            Pseudo Genes (frameshifted)       :: 39 of 86
            Pseudo Genes (incomplete)         :: 41 of 86
            Pseudo Genes (internal stop)      :: 10 of 86
            Pseudo Genes (multiple problems)  :: 4 of 86
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2690638
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="19BRD-084"
                     /isolation_source="lung"
                     /host="cattle"
                     /db_xref="taxon:75985"
                     /geo_loc_name="Australia: New South Wales"
                     /collection_date="2019"
                     /collected_by="ACARE"
WGS         JBXEPH010000001
WGS_SCAFLD  NZ_CM166482
//
LOCUS       NZ_JBSXOP010000000   3666879 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Marinobacter sp. L-46, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXOP000000000
VERSION     NZ_JBSXOP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312083
            Assembly: GCF_056859535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marinobacter sp. L-46
  ORGANISM  Marinobacter sp. L-46
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 3666879)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXOP000000000.1.
            The Marinobacter sp. L-46 whole genome shotgun (WGS) project has
            the project accession NZ_JBSXOP000000000.  This version of the
            project (01) has the accession number NZ_JBSXOP010000000, and
            consists of sequences JBSXOP010000001-JBSXOP010000093.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 332.78x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859535.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:20:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,488
            CDSs (total)                      :: 3,428
            Genes (coding)                    :: 3,344
            CDSs (with protein)               :: 3,344
            Genes (RNA)                       :: 60
            rRNAs                             :: 5, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 4, 3 (5S, 16S)
            tRNAs                             :: 44
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 84
            CDSs (without protein)            :: 84
            Pseudo Genes (ambiguous residues) :: 0 of 84
            Pseudo Genes (frameshifted)       :: 20 of 84
            Pseudo Genes (incomplete)         :: 65 of 84
            Pseudo Genes (internal stop)      :: 9 of 84
            Pseudo Genes (multiple problems)  :: 9 of 84
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3666879
                     /organism="Marinobacter sp. L-46"
                     /mol_type="genomic DNA"
                     /strain="L-46"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472702"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.69187 N 63.83227 E"
                     /collection_date="2022-06"
WGS         JBSXOP010000001-JBSXOP010000093
WGS_SCAFLD  NZ_JBSXOP010000001-NZ_JBSXOP010000093
//
LOCUS       NZ_JBXGHQ010000000   2497029 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Moraxella bovis strain SL8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGHQ000000000
VERSION     NZ_JBXGHQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772385
            Assembly: GCF_056855455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Moraxella bovis
  ORGANISM  Moraxella bovis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 2497029)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGHQ000000000.1.
            The Moraxella bovis whole genome shotgun (WGS) project has the
            project accession NZ_JBXGHQ000000000.  This version of the project
            (01) has the accession number NZ_JBXGHQ010000000, and consists of
            sequences JBXGHQ010000001-JBXGHQ010000091.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855455.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:45:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,482
            CDSs (total)                      :: 2,432
            Genes (coding)                    :: 2,373
            CDSs (with protein)               :: 2,373
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 15 of 59
            Pseudo Genes (incomplete)         :: 40 of 59
            Pseudo Genes (internal stop)      :: 7 of 59
            Pseudo Genes (multiple problems)  :: 3 of 59
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2497029
                     /organism="Moraxella bovis"
                     /mol_type="genomic DNA"
                     /strain="SL8"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:476"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.85 W"
                     /collection_date="2023-08-17"
WGS         JBXGHQ010000001-JBXGHQ010000091
WGS_SCAFLD  NZ_JBXGHQ010000001-NZ_JBXGHQ010000091
//
LOCUS       NZ_FTTO01000000      4708101 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Shigella sonnei strain 2090STDY5461791, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FTTO00000000
VERSION     NZ_FTTO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2054403
            Assembly: GCF_900157625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Shigella sonnei
  ORGANISM  Shigella sonnei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
REFERENCE   1
  CONSRTM   Pathogen Informatics
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2017) WTSI, Pathogen Informatics, Wellcome Trust
            Sanger Institute, CB10 1SA, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FTTO00000000.1.
            The Shigella sonnei whole genome shotgun (WGS) project has the
            project accession NZ_FTTO00000000.  This version of the project
            (01) has the accession number NZ_FTTO01000000, and consists of
            sequences FTTO01000001-FTTO01000427.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900157625.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:55:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,056
            CDSs (total)                      :: 4,956
            Genes (coding)                    :: 4,378
            CDSs (with protein)               :: 4,378
            Genes (RNA)                       :: 100
            rRNAs                             :: 5, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 23S)
            partial rRNAs                     :: 3 (16S)
            tRNAs                             :: 82
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 578
            CDSs (without protein)            :: 578
            Pseudo Genes (ambiguous residues) :: 0 of 578
            Pseudo Genes (frameshifted)       :: 123 of 578
            Pseudo Genes (incomplete)         :: 420 of 578
            Pseudo Genes (internal stop)      :: 83 of 578
            Pseudo Genes (multiple problems)  :: 45 of 578
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4708101
                     /organism="Shigella sonnei"
                     /mol_type="genomic DNA"
                     /strain="2090STDY5461791"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:624"
                     /geo_loc_name="Colombia"
                     /collection_date="1900/2016"
WGS         FTTO01000001-FTTO01000427
WGS_SCAFLD  NZ_FTTO01000001-NZ_FTTO01000427
//
LOCUS       NZ_JBXGIP010000000   2107406 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Moraxella bovoculi strain SL15, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGIP000000000
VERSION     NZ_JBXGIP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772360
            Assembly: GCF_056855975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Moraxella bovoculi
  ORGANISM  Moraxella bovoculi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 2107406)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGIP000000000.1.
            The Moraxella bovoculi whole genome shotgun (WGS) project has the
            project accession NZ_JBXGIP000000000.  This version of the project
            (01) has the accession number NZ_JBXGIP010000000, and consists of
            sequences JBXGIP010000001-JBXGIP010000051.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855975.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:56:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,062
            CDSs (total)                      :: 2,010
            Genes (coding)                    :: 1,959
            CDSs (with protein)               :: 1,959
            Genes (RNA)                       :: 52
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2, 1 (5S, 16S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 21 of 51
            Pseudo Genes (incomplete)         :: 30 of 51
            Pseudo Genes (internal stop)      :: 18 of 51
            Pseudo Genes (multiple problems)  :: 15 of 51
            CRISPR Arrays                     :: 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2107406
                     /organism="Moraxella bovoculi"
                     /mol_type="genomic DNA"
                     /strain="SL15"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:386891"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2023-05-15"
WGS         JBXGIP010000001-JBXGIP010000051
WGS_SCAFLD  NZ_JBXGIP010000001-NZ_JBXGIP010000051
//
LOCUS       NZ_FTNN01000000      4187389 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Shewanella morhuae strain ATCC BAA-1205, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FTNN00000000
VERSION     NZ_FTNN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05421840
            Assembly: GCF_900156405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Shewanella morhuae
  ORGANISM  Shewanella morhuae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JAN-2017) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FTNN00000000.1.
            The Shewanella morhuae whole genome shotgun (WGS) project has the
            project accession NZ_FTNN00000000.  This version of the project
            (01) has the accession number NZ_FTNN01000000, and consists of
            sequences FTNN01000001-FTNN01000032.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900156405.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:53:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,660
            CDSs (total)                      :: 3,570
            Genes (coding)                    :: 3,505
            CDSs (with protein)               :: 3,505
            Genes (RNA)                       :: 90
            rRNAs                             :: 6, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 30 of 65
            Pseudo Genes (incomplete)         :: 30 of 65
            Pseudo Genes (internal stop)      :: 25 of 65
            Pseudo Genes (multiple problems)  :: 15 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4187389
                     /organism="Shewanella morhuae"
                     /mol_type="genomic DNA"
                     /strain="ATCC BAA-1205"
                     /type_material="type strain of Shewanella morhuae"
                     /db_xref="taxon:365591"
WGS         FTNN01000001-FTNN01000032
WGS_SCAFLD  NZ_FTNN01000001-NZ_FTNN01000032
//
LOCUS       NZ_FTTV01000000      4600465 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Shigella sonnei strain 2090STDY5461801, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FTTV00000000
VERSION     NZ_FTTV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2054467
            Assembly: GCF_900157965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Shigella sonnei
  ORGANISM  Shigella sonnei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
REFERENCE   1
  CONSRTM   Pathogen Informatics
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2017) WTSI, Pathogen Informatics, Wellcome Trust
            Sanger Institute, CB10 1SA, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FTTV00000000.1.
            The Shigella sonnei whole genome shotgun (WGS) project has the
            project accession NZ_FTTV00000000.  This version of the project
            (01) has the accession number NZ_FTTV01000000, and consists of
            sequences FTTV01000001-FTTV01000439.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900157965.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:56:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,932
            CDSs (total)                      :: 4,836
            Genes (coding)                    :: 4,257
            CDSs (with protein)               :: 4,257
            Genes (RNA)                       :: 96
            rRNAs                             :: 4, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 579
            CDSs (without protein)            :: 579
            Pseudo Genes (ambiguous residues) :: 0 of 579
            Pseudo Genes (frameshifted)       :: 126 of 579
            Pseudo Genes (incomplete)         :: 417 of 579
            Pseudo Genes (internal stop)      :: 82 of 579
            Pseudo Genes (multiple problems)  :: 42 of 579
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4600465
                     /organism="Shigella sonnei"
                     /mol_type="genomic DNA"
                     /strain="2090STDY5461801"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:624"
                     /geo_loc_name="Colombia"
                     /collection_date="2011"
WGS         FTTV01000001-FTTV01000439
WGS_SCAFLD  NZ_FTTV01000001-NZ_FTTV01000439
//
LOCUS       NZ_JBSXOB010000000   4562279 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Marinobacter sp. B-12, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXOB000000000
VERSION     NZ_JBSXOB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312059
            Assembly: GCF_056857915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marinobacter sp. B-12
  ORGANISM  Marinobacter sp. B-12
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 4562279)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXOB000000000.1.
            The Marinobacter sp. B-12 whole genome shotgun (WGS) project has
            the project accession NZ_JBSXOB000000000.  This version of the
            project (01) has the accession number NZ_JBSXOB010000000, and
            consists of sequences JBSXOB010000001-JBSXOB010000066.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 268.61x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857915.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:23:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,228
            CDSs (total)                      :: 4,175
            Genes (coding)                    :: 4,141
            CDSs (with protein)               :: 4,141
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 8 of 34
            Pseudo Genes (incomplete)         :: 26 of 34
            Pseudo Genes (internal stop)      :: 6 of 34
            Pseudo Genes (multiple problems)  :: 6 of 34
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4562279
                     /organism="Marinobacter sp. B-12"
                     /mol_type="genomic DNA"
                     /strain="B-12"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472678"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.70368 N 63.83797 E"
                     /collection_date="2022-06"
WGS         JBSXOB010000001-JBSXOB010000066
WGS_SCAFLD  NZ_JBSXOB010000001-NZ_JBSXOB010000066
//
LOCUS       NZ_JBXGIR010000000   2701313 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Moraxella bovis strain SL12, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGIR000000000
VERSION     NZ_JBXGIR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772358
            Assembly: GCF_056855995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Moraxella bovis
  ORGANISM  Moraxella bovis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 2701313)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGIR000000000.1.
            The Moraxella bovis whole genome shotgun (WGS) project has the
            project accession NZ_JBXGIR000000000.  This version of the project
            (01) has the accession number NZ_JBXGIR010000000, and consists of
            sequences JBXGIR010000001-JBXGIR010000108.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855995.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:02:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,764
            CDSs (total)                      :: 2,715
            Genes (coding)                    :: 2,655
            CDSs (with protein)               :: 2,655
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 15 of 60
            Pseudo Genes (incomplete)         :: 37 of 60
            Pseudo Genes (internal stop)      :: 12 of 60
            Pseudo Genes (multiple problems)  :: 4 of 60
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2701313
                     /organism="Moraxella bovis"
                     /mol_type="genomic DNA"
                     /strain="SL12"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:476"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2023-05-15"
WGS         JBXGIR010000001-JBXGIR010000108
WGS_SCAFLD  NZ_JBXGIR010000001-NZ_JBXGIR010000108
//
LOCUS       NZ_JBSXNK010000000   3673283 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Marinobacter sp. L-2, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXNK000000000
VERSION     NZ_JBSXNK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312076
            Assembly: GCF_056857595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marinobacter sp. L-2
  ORGANISM  Marinobacter sp. L-2
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 3673283)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXNK000000000.1.
            The Marinobacter sp. L-2 whole genome shotgun (WGS) project has the
            project accession NZ_JBSXNK000000000.  This version of the project
            (01) has the accession number NZ_JBSXNK010000000, and consists of
            sequences JBSXNK010000001-JBSXNK010000093.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 311.82x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857595.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:14:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,501
            CDSs (total)                      :: 3,442
            Genes (coding)                    :: 3,348
            CDSs (with protein)               :: 3,348
            Genes (RNA)                       :: 59
            rRNAs                             :: 5, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 4, 3 (5S, 16S)
            tRNAs                             :: 43
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 94
            CDSs (without protein)            :: 94
            Pseudo Genes (ambiguous residues) :: 0 of 94
            Pseudo Genes (frameshifted)       :: 22 of 94
            Pseudo Genes (incomplete)         :: 71 of 94
            Pseudo Genes (internal stop)      :: 12 of 94
            Pseudo Genes (multiple problems)  :: 10 of 94
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3673283
                     /organism="Marinobacter sp. L-2"
                     /mol_type="genomic DNA"
                     /strain="L-2"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472695"
                     /geo_loc_name="Indian Ocean: Southwestern Indian Ridge"
                     /lat_lon="37.93805 S 49.26156 E"
                     /collection_date="2024-05"
WGS         JBSXNK010000001-JBSXNK010000093
WGS_SCAFLD  NZ_JBSXNK010000001-NZ_JBSXNK010000093
//
LOCUS       NZ_AGVV01000000      7001588 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Sinorhizobium meliloti CCNWSX0020, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AGVV00000000
VERSION     NZ_AGVV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02470710
            Assembly: GCF_000236945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti CCNWSX0020
  ORGANISM  Sinorhizobium meliloti CCNWSX0020
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7001588)
  AUTHORS   Li,Z., Ma,Z., Hao,X. and Wei,G.
  TITLE     Draft genome sequence of Sinorhizobium meliloti CCNWSX0020, a
            nitrogen-fixing symbiont with copper tolerance capability isolated
            from lead-zinc mine tailings
  JOURNAL   J Bacteriol 194 (5), 1267-1268 (2012)
   PUBMED   22328762
REFERENCE   2  (bases 1 to 7001588)
  AUTHORS   Li,Z., Ma,Z., Hao,X. and Wei,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-NOV-2011) College of Life Sciences, Northwest A&F
            University, No. 3 Taicheng Road, Yangling, Shaanxi 712100, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AGVV00000000.1.
            The Sinorhizobium meliloti CCNWSX0020 whole genome shotgun (WGS)
            project has the project accession NZ_AGVV00000000.  This version of
            the project (01) has the accession number NZ_AGVV01000000, and
            consists of sequences AGVV01000001-AGVV01000233.
            Bacteria available from College of Life Science, Northwest A&F
            University, Yangling, Shaanxi 712100, P. R. China.
            
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-FEB-2011
            Assembly Method       :: Newbler v. 2.5.3
            Genome Coverage       :: 22x
            Sequencing Technology :: 454 GS FLX Titanium
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000236945.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:52:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,840
            CDSs (total)                      :: 6,781
            Genes (coding)                    :: 6,423
            CDSs (with protein)               :: 6,423
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 358
            CDSs (without protein)            :: 358
            Pseudo Genes (ambiguous residues) :: 0 of 358
            Pseudo Genes (frameshifted)       :: 203 of 358
            Pseudo Genes (incomplete)         :: 218 of 358
            Pseudo Genes (internal stop)      :: 38 of 358
            Pseudo Genes (multiple problems)  :: 90 of 358
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7001588
                     /organism="Sinorhizobium meliloti CCNWSX0020"
                     /mol_type="genomic DNA"
                     /strain="CCNWSX0020"
                     /db_xref="taxon:1107881"
WGS         AGVV01000001-AGVV01000233
WGS_SCAFLD  NZ_AGVV01000001-NZ_AGVV01000233
//
LOCUS       NZ_FTSS01000000      4536169 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Shigella sonnei strain 2090STDY5461779, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FTSS00000000
VERSION     NZ_FTSS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2054391
            Assembly: GCF_900157585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Shigella sonnei
  ORGANISM  Shigella sonnei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
REFERENCE   1
  CONSRTM   Pathogen Informatics
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2017) WTSI, Pathogen Informatics, Wellcome Trust
            Sanger Institute, CB10 1SA, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FTSS00000000.1.
            The Shigella sonnei whole genome shotgun (WGS) project has the
            project accession NZ_FTSS00000000.  This version of the project
            (01) has the accession number NZ_FTSS01000000, and consists of
            sequences FTSS01000001-FTSS01000408.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900157585.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:52:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,816
            CDSs (total)                      :: 4,719
            Genes (coding)                    :: 4,141
            CDSs (with protein)               :: 4,141
            Genes (RNA)                       :: 97
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 578
            CDSs (without protein)            :: 578
            Pseudo Genes (ambiguous residues) :: 0 of 578
            Pseudo Genes (frameshifted)       :: 141 of 578
            Pseudo Genes (incomplete)         :: 403 of 578
            Pseudo Genes (internal stop)      :: 90 of 578
            Pseudo Genes (multiple problems)  :: 50 of 578
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4536169
                     /organism="Shigella sonnei"
                     /mol_type="genomic DNA"
                     /strain="2090STDY5461779"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:624"
                     /geo_loc_name="Colombia"
                     /collection_date="2010"
WGS         FTSS01000001-FTSS01000408
WGS_SCAFLD  NZ_FTSS01000001-NZ_FTSS01000408
//
LOCUS       NZ_AJQO01000000      6815462 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Sinorhizobium fredii CCBAU 45436, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AJQO00000000
VERSION     NZ_AJQO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02469479
            Assembly: GCF_000261885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium fredii CCBAU 45436
  ORGANISM  Sinorhizobium fredii CCBAU 45436
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 6815462)
  AUTHORS   Tian,C.F., Zhou,Y.J., Zhang,Y.M., Li,Q.Q., Zhang,Y.Z., Li,D.F.,
            Wang,S., Wang,J., Gilbert,L.B., Li,Y.R. and Chen,W.X.
  TITLE     Comparative genomics of rhizobia nodulating soybean suggests
            extensive recruitment of lineage-specific genes in adaptations
  JOURNAL   Proc Natl Acad Sci U S A 109 (22), 8629-8634 (2012)
   PUBMED   22586130
REFERENCE   2  (bases 1 to 6815462)
  AUTHORS   Tian,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-DEC-2011) College of Biological Sciences, China
            Agricultural University, Room No. 1017, Center for Life Sciences,
            Yuanmingyuan Xilu No. 2, Haidian district, Beijing 100193, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AJQO00000000.1.
            The Sinorhizobium fredii CCBAU 45436 whole genome shotgun (WGS)
            project has the project accession NZ_AJQO00000000.  This version of
            the project (01) has the accession number NZ_AJQO01000000, and
            consists of sequences AJQO01000001-AJQO01000327.
            Source DNA available from CCBAU at China Agricultural University.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 1.05
            Assembly Name         :: 45436
            Genome Coverage       :: 155x
            Sequencing Technology :: Illumina HiSeq2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000261885.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:49:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,675
            CDSs (total)                      :: 6,603
            Genes (coding)                    :: 6,306
            CDSs (with protein)               :: 6,306
            Genes (RNA)                       :: 72
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 297
            CDSs (without protein)            :: 297
            Pseudo Genes (ambiguous residues) :: 0 of 297
            Pseudo Genes (frameshifted)       :: 110 of 297
            Pseudo Genes (incomplete)         :: 228 of 297
            Pseudo Genes (internal stop)      :: 18 of 297
            Pseudo Genes (multiple problems)  :: 53 of 297
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6815462
                     /organism="Sinorhizobium fredii CCBAU 45436"
                     /mol_type="genomic DNA"
                     /strain="CCBAU 45436"
                     /host="Glycine max"
                     /db_xref="taxon:1128331"
                     /geo_loc_name="China"
WGS         AJQO01000001-AJQO01000327
WGS_SCAFLD  NZ_AJQO01000001-NZ_AJQO01000327
//
LOCUS       NZ_JBTNEN010000000  11213491 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Nonomuraea sp. ATCC-39365 strain ATCC 39365, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBTNEN000000000
VERSION     NZ_JBTNEN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54456877
            Assembly: GCF_056862825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Nonomuraea sp. ATCC-39365
  ORGANISM  Nonomuraea sp. ATCC-39365
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (bases 1 to 11213491)
  AUTHORS   Rosas Becerra,L.R., Selem Mojica,N. and Barona Gomez,F.
  TITLE     Functional shifts of the dual-substrate phosphoribosyl isomerase
            PriA from primary to specialized metabolism in rare Actinomycetota
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 11213491)
  AUTHORS   Rosas Becerra,L.R., Selem Mojica,N. and Barona Gomez,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JAN-2026) Unidad de Genomica Avanzada -LANGEBIO,
            Centro de Investigacion y de Estudios Avanzados del IPN,
            Libramiento Norte Leon Km 9.6, Irapuato 36821, Mexico
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTNEN000000000.1.
            The Nonomuraea sp. ATCC-39365 whole genome shotgun (WGS) project
            has the project accession NZ_JBTNEN000000000.  This version of the
            project (01) has the accession number NZ_JBTNEN010000000, and
            consists of sequence JBTNEN010000001.
            Bacteria and source DNA available from Francisco Barona-Gomez.
            Institute Biology Leiden. Sylviusweg 72 2333 BE Leiden, The
            Netherlands.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-JUL-2021
            Assembly Method        :: Canu v. Nov-2021
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 169.0x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862825.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:31:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 10,733
            CDSs (total)                      :: 10,655
            Genes (coding)                    :: 10,425
            CDSs (with protein)               :: 10,425
            Genes (RNA)                       :: 78
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 230
            CDSs (without protein)            :: 230
            Pseudo Genes (ambiguous residues) :: 0 of 230
            Pseudo Genes (frameshifted)       :: 108 of 230
            Pseudo Genes (incomplete)         :: 131 of 230
            Pseudo Genes (internal stop)      :: 3 of 230
            Pseudo Genes (multiple problems)  :: 12 of 230
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11213491
                     /organism="Nonomuraea sp. ATCC-39365"
                     /mol_type="genomic DNA"
                     /strain="ATCC 39365"
                     /isolation_source="soil"
                     /culture_collection="ATCC:39365"
                     /db_xref="taxon:3569254"
                     /geo_loc_name="Japan: Nagano"
                     /collection_date="1985"
WGS         JBTNEN010000001
WGS_SCAFLD  NZ_CM166502
//
LOCUS       NZ_AJQQ01000000      6876949 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Sinorhizobium fredii CCBAU 83643, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AJQQ00000000
VERSION     NZ_AJQQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02469486
            Assembly: GCF_000261925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium fredii CCBAU 83643
  ORGANISM  Sinorhizobium fredii CCBAU 83643
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 6876949)
  AUTHORS   Tian,C.F., Zhou,Y.J., Zhang,Y.M., Li,Q.Q., Zhang,Y.Z., Li,D.F.,
            Wang,S., Wang,J., Gilbert,L.B., Li,Y.R. and Chen,W.X.
  TITLE     Comparative genomics of rhizobia nodulating soybean suggests
            extensive recruitment of lineage-specific genes in adaptations
  JOURNAL   Proc Natl Acad Sci U S A 109 (22), 8629-8634 (2012)
   PUBMED   22586130
REFERENCE   2  (bases 1 to 6876949)
  AUTHORS   Tian,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-DEC-2011) College of Biological Sciences, China
            Agricultural University, Room No. 1017, Center for Life Sciences,
            Yuanmingyuan Xilu No. 2, Haidian district, Beijing 100193, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AJQQ00000000.1.
            The Sinorhizobium fredii CCBAU 83643 whole genome shotgun (WGS)
            project has the project accession NZ_AJQQ00000000.  This version of
            the project (01) has the accession number NZ_AJQQ01000000, and
            consists of sequences AJQQ01000001-AJQQ01000438.
            Source DNA available from CCBAU at China Agricultural University.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 1.05
            Assembly Name         :: 83643
            Genome Coverage       :: 168x
            Sequencing Technology :: Illumina HiSeq2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000261925.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:55:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,788
            CDSs (total)                      :: 6,732
            Genes (coding)                    :: 6,322
            CDSs (with protein)               :: 6,322
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 410
            CDSs (without protein)            :: 410
            Pseudo Genes (ambiguous residues) :: 0 of 410
            Pseudo Genes (frameshifted)       :: 184 of 410
            Pseudo Genes (incomplete)         :: 280 of 410
            Pseudo Genes (internal stop)      :: 37 of 410
            Pseudo Genes (multiple problems)  :: 83 of 410
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6876949
                     /organism="Sinorhizobium fredii CCBAU 83643"
                     /mol_type="genomic DNA"
                     /strain="CCBAU 83643"
                     /host="Glycine max"
                     /db_xref="taxon:1128333"
                     /geo_loc_name="China"
WGS         AJQQ01000001-AJQQ01000438
WGS_SCAFLD  NZ_AJQQ01000001-NZ_AJQQ01000438
//
LOCUS       NZ_JBSXOF010000000   3231170 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methylophaga sp. F-2, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXOF000000000
VERSION     NZ_JBSXOF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312055
            Assembly: GCF_056859315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Methylophaga sp. F-2
  ORGANISM  Methylophaga sp. F-2
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Thiotrichales; Piscirickettsiaceae; Methylophaga.
REFERENCE   1  (bases 1 to 3231170)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXOF000000000.1.
            The Methylophaga sp. F-2 whole genome shotgun (WGS) project has the
            project accession NZ_JBSXOF000000000.  This version of the project
            (01) has the accession number NZ_JBSXOF010000000, and consists of
            sequences JBSXOF010000001-JBSXOF010000022.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 378.74x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859315.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:16:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,131
            CDSs (total)                      :: 3,082
            Genes (coding)                    :: 3,069
            CDSs (with protein)               :: 3,069
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 2 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 3 of 13
            Pseudo Genes (multiple problems)  :: 1 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3231170
                     /organism="Methylophaga sp. F-2"
                     /mol_type="genomic DNA"
                     /strain="F-2"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472674"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.69187 N 63.83227 E"
                     /collection_date="2022-06"
WGS         JBSXOF010000001-JBSXOF010000022
WGS_SCAFLD  NZ_JBSXOF010000001-NZ_JBSXOF010000022
//
LOCUS       NZ_FTTF01000000      4479413 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Shigella sonnei strain 2090STDY5461737, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FTTF00000000
VERSION     NZ_FTTF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2054157
            Assembly: GCF_900157805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Shigella sonnei
  ORGANISM  Shigella sonnei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
REFERENCE   1
  CONSRTM   Pathogen Informatics
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2017) WTSI, Pathogen Informatics, Wellcome Trust
            Sanger Institute, CB10 1SA, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FTTF00000000.1.
            The Shigella sonnei whole genome shotgun (WGS) project has the
            project accession NZ_FTTF00000000.  This version of the project
            (01) has the accession number NZ_FTTF01000000, and consists of
            sequences FTTF01000001-FTTF01000377.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900157805.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:05:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,745
            CDSs (total)                      :: 4,646
            Genes (coding)                    :: 4,064
            CDSs (with protein)               :: 4,064
            Genes (RNA)                       :: 99
            rRNAs                             :: 6, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 1, 3 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 582
            CDSs (without protein)            :: 582
            Pseudo Genes (ambiguous residues) :: 0 of 582
            Pseudo Genes (frameshifted)       :: 140 of 582
            Pseudo Genes (incomplete)         :: 407 of 582
            Pseudo Genes (internal stop)      :: 92 of 582
            Pseudo Genes (multiple problems)  :: 52 of 582
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4479413
                     /organism="Shigella sonnei"
                     /mol_type="genomic DNA"
                     /strain="2090STDY5461737"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:624"
                     /geo_loc_name="Paraguay"
                     /collection_date="2008"
WGS         FTTF01000001-FTTF01000377
WGS_SCAFLD  NZ_FTTF01000001-NZ_FTTF01000377
//
LOCUS       NZ_JBXGIU010000000   2104759 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Moraxella bovoculi strain SL1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGIU000000000
VERSION     NZ_JBXGIU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772355
            Assembly: GCF_056856035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Moraxella bovoculi
  ORGANISM  Moraxella bovoculi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 2104759)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGIU000000000.1.
            The Moraxella bovoculi whole genome shotgun (WGS) project has the
            project accession NZ_JBXGIU000000000.  This version of the project
            (01) has the accession number NZ_JBXGIU010000000, and consists of
            sequences JBXGIU010000001-JBXGIU010000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856035.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:56:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,053
            CDSs (total)                      :: 2,003
            Genes (coding)                    :: 1,949
            CDSs (with protein)               :: 1,949
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 25 of 54
            Pseudo Genes (incomplete)         :: 28 of 54
            Pseudo Genes (internal stop)      :: 18 of 54
            Pseudo Genes (multiple problems)  :: 14 of 54
            CRISPR Arrays                     :: 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104759
                     /organism="Moraxella bovoculi"
                     /mol_type="genomic DNA"
                     /strain="SL1"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:386891"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.85 W"
                     /collection_date="2023-08-17"
WGS         JBXGIU010000001-JBXGIU010000026
WGS_SCAFLD  NZ_JBXGIU010000001-NZ_JBXGIU010000026
//
LOCUS       NZ_QJSY01000000      4440513 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Shewanella chilikensis strain JC5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_QJSY00000000
VERSION     NZ_QJSY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08777254
            Assembly: GCF_003217175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Shewanella chilikensis
  ORGANISM  Shewanella chilikensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
REFERENCE   1  (bases 1 to 4440513)
  AUTHORS   Whitman,W.
  TITLE     Genomic Encyclopedia of Type Strains, Phase III (KMG-III): the
            genomes of soil and plant-associated and newly described type
            strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4440513)
  AUTHORS   Whitman,W., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2018) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QJSY00000000.1.
            The Shewanella chilikensis whole genome shotgun (WGS) project has
            the project accession NZ_QJSY00000000.  This version of the project
            (01) has the accession number NZ_QJSY01000000, and consists of
            sequences QJSY01000001-QJSY01000090.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10.1
            Expected Final Version :: No
            Genome Coverage        :: 215.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003217175.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:48:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,045
            CDSs (total)                      :: 3,938
            Genes (coding)                    :: 3,867
            CDSs (with protein)               :: 3,867
            Genes (RNA)                       :: 107
            rRNAs                             :: 5, 2 (5S, 16S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2, 1 (5S, 16S)
            tRNAs                             :: 95
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 15 of 71
            Pseudo Genes (incomplete)         :: 64 of 71
            Pseudo Genes (internal stop)      :: 6 of 71
            Pseudo Genes (multiple problems)  :: 12 of 71
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4440513
                     /organism="Shewanella chilikensis"
                     /mol_type="genomic DNA"
                     /strain="JC5"
                     /type_material="type strain of Shewanella chilikensis"
                     /db_xref="taxon:558541"
WGS         QJSY01000001-QJSY01000090
WGS_SCAFLD  NZ_QJSY01000001-NZ_QJSY01000090
//
LOCUS       NZ_JBXFWX010000000   5635212 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paenibacillus pasadenensis strain YC4, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXFWX000000000
VERSION     NZ_JBXFWX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN57193757
            Assembly: GCF_056856835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paenibacillus pasadenensis
  ORGANISM  Paenibacillus pasadenensis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (bases 1 to 5635212)
  AUTHORS   Wu,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2026) College of Life Science, Hebei University,
            No. 180 Wusi East Road, Baoding, Hebei 071002, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFWX000000000.1.
            The Paenibacillus pasadenensis whole genome shotgun (WGS) project
            has the project accession NZ_JBXFWX000000000.  This version of the
            project (01) has the accession number NZ_JBXFWX010000000, and
            consists of sequence JBXFWX010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: flye v. v2.9.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 230x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856835.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:22:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,894
            CDSs (total)                      :: 4,784
            Genes (coding)                    :: 4,744
            CDSs (with protein)               :: 4,744
            Genes (RNA)                       :: 110
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 40
            CDSs (without protein)            :: 40
            Pseudo Genes (ambiguous residues) :: 0 of 40
            Pseudo Genes (frameshifted)       :: 5 of 40
            Pseudo Genes (incomplete)         :: 33 of 40
            Pseudo Genes (internal stop)      :: 5 of 40
            Pseudo Genes (multiple problems)  :: 3 of 40
            CRISPR Arrays                     :: 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5635212
                     /organism="Paenibacillus pasadenensis"
                     /mol_type="genomic DNA"
                     /strain="YC4"
                     /isolation_source="Xanthium italicum Moretti"
                     /db_xref="taxon:217090"
                     /geo_loc_name="China: Baoding"
                     /collection_date="2024-10-06"
WGS         JBXFWX010000001
WGS_SCAFLD  NZ_CM166467
//
LOCUS       NZ_NBUH01000000      6728715 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Sinorhizobium medicae strain Str11, whole genome shotgun sequencing
            project.
ACCESSION   NZ_NBUH00000000
VERSION     NZ_NBUH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05980192
            Assembly: GCF_002865055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium medicae (Ensifer medicae)
  ORGANISM  Sinorhizobium medicae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 6728715)
  AUTHORS   Porter,S.S., Faber-Hammond,J.J. and Friesen,M.L.
  TITLE     Co-invading symbiotic mutualists of Medicago polymorpha retain high
            ancestral diversity and contain diverse accessory genomes
  JOURNAL   FEMS Microbiol Ecol 94 (1) (2018)
   PUBMED   29228264
REFERENCE   2  (bases 1 to 6728715)
  AUTHORS   Porter,S., Friesen,M.L. and Faber-Hammond,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-APR-2017) Biology, Washington State University
            Vancouver, 14204 NE Salmon Creek Ave., Vancouver, WA 98686, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NBUH00000000.1.
            The Sinorhizobium medicae whole genome shotgun (WGS) project has
            the project accession NZ_NBUH00000000.  This version of the project
            (01) has the accession number NZ_NBUH01000000, and consists of
            sequences NBUH01000001-NBUH01000248.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method           :: AllPaths v. May-18-2012 Linux x64 A5
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: GCA_000017145.1
            Genome Coverage           :: 14.7x
            Sequencing Technology     :: Illumina Genome Analyzer IIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002865055.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:53:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,742
            CDSs (total)                      :: 6,685
            Genes (coding)                    :: 5,724
            CDSs (with protein)               :: 5,724
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 961
            CDSs (without protein)            :: 961
            Pseudo Genes (ambiguous residues) :: 1 of 961
            Pseudo Genes (frameshifted)       :: 698 of 961
            Pseudo Genes (incomplete)         :: 346 of 961
            Pseudo Genes (internal stop)      :: 87 of 961
            Pseudo Genes (multiple problems)  :: 157 of 961
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6728715
                     /organism="Sinorhizobium medicae"
                     /mol_type="genomic DNA"
                     /strain="Str11"
                     /host="Medicago polymorpha"
                     /db_xref="taxon:110321"
                     /geo_loc_name="USA: California"
                     /lat_lon="38.871 N 122.419 W"
                     /collection_date="2009"
WGS         NBUH01000001-NBUH01000248
WGS_SCAFLD  NZ_NBUH01000001-NZ_NBUH01000248
//
LOCUS       NZ_JBSXNX010000000   3070419 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Maricaulis sp. B-26, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXNX000000000
VERSION     NZ_JBSXNX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312063
            Assembly: GCF_056857855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Maricaulis sp. B-26
  ORGANISM  Maricaulis sp. B-26
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Maricaulales; Maricaulaceae; Maricaulis.
REFERENCE   1  (bases 1 to 3070419)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXNX000000000.1.
            The Maricaulis sp. B-26 whole genome shotgun (WGS) project has the
            project accession NZ_JBSXNX000000000.  This version of the project
            (01) has the accession number NZ_JBSXNX010000000, and consists of
            sequences JBSXNX010000001-JBSXNX010000027.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 376.8x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857855.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:05:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,956
            CDSs (total)                      :: 2,905
            Genes (coding)                    :: 2,893
            CDSs (with protein)               :: 2,893
            Genes (RNA)                       :: 51
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 10 of 12
            Pseudo Genes (internal stop)      :: 0 of 12
            Pseudo Genes (multiple problems)  :: 1 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3070419
                     /organism="Maricaulis sp. B-26"
                     /mol_type="genomic DNA"
                     /strain="B-26"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472682"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.70368 N 63.83797 E"
                     /collection_date="2022-06"
WGS         JBSXNX010000001-JBSXNX010000027
WGS_SCAFLD  NZ_JBSXNX010000001-NZ_JBSXNX010000027
//
LOCUS       NZ_QWTV01000000      4542501 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Shigella sonnei strain DMB SH20230, whole genome shotgun sequencing
            project.
ACCESSION   NZ_QWTV00000000
VERSION     NZ_QWTV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03291485
            Assembly: GCF_003572805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Shigella sonnei
  ORGANISM  Shigella sonnei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4542501)
  AUTHORS   Gangiredla,J., Mammel,M.K., Lacher,D.W., Tartera,C., Jackson,S.A.,
            Patel,I.R., Elkins,C.A. and Mukherjee,A.
  TITLE     Draft Genome Sequences of 72 Isolates from All Four Species of
            Shigella
  JOURNAL   Microbiol Resour Announc 7 (21), e01399-18 (2018)
   PUBMED   30533843
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4542501)
  AUTHORS   Gangiredla,J., Mammel,M.K., Lacher,D.W., Tartera,C., Jackson,S.A.,
            Patel,I.R., Elkins,C.A. and Mukherjee,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-AUG-2018) CFSAN-ORS-DM-MMSB, US Food and Drug
            Administration, 5100 Paint Branch Parkway, College Park, MD 20740,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QWTV00000000.1.
            The Shigella sonnei whole genome shotgun (WGS) project has the
            project accession NZ_QWTV00000000.  This version of the project
            (01) has the accession number NZ_QWTV01000000, and consists of
            sequences QWTV01000001-QWTV01000563.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 33x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003572805.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:09:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,711
            CDSs (total)                      :: 4,640
            Genes (coding)                    :: 4,070
            CDSs (with protein)               :: 4,070
            Genes (RNA)                       :: 71
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 56
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 570
            CDSs (without protein)            :: 570
            Pseudo Genes (ambiguous residues) :: 0 of 570
            Pseudo Genes (frameshifted)       :: 128 of 570
            Pseudo Genes (incomplete)         :: 399 of 570
            Pseudo Genes (internal stop)      :: 86 of 570
            Pseudo Genes (multiple problems)  :: 40 of 570
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4542501
                     /organism="Shigella sonnei"
                     /mol_type="genomic DNA"
                     /strain="DMB SH20230"
                     /serotype="O-:H16"
                     /serovar="SS"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:624"
                     /geo_loc_name="USA"
                     /collection_date="2003"
                     /collected_by="Maryland Department of Health and Mental
                     Hygiene"
WGS         QWTV01000001-QWTV01000563
WGS_SCAFLD  NZ_QWTV01000001-NZ_QWTV01000563
//
LOCUS       NZ_JBPDIS010000000   6306425 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mycolicibacterium litorale strain NIIDNTM18, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPDIS000000000
VERSION     NZ_JBPDIS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN49041169
            Assembly: GCF_056858715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycolicibacterium litorale (Mycobacterium litorale)
  ORGANISM  Mycolicibacterium litorale
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (bases 1 to 6306425)
  AUTHORS   Lin,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JUN-2025) Department of Laboratory Medicine, West
            China Hospital, Sichuan University, Xiaotianzhu Rd, Chengdu 643100,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPDIS000000000.1.
            The Mycolicibacterium litorale whole genome shotgun (WGS) project
            has the project accession NZ_JBPDIS000000000.  This version of the
            project (01) has the accession number NZ_JBPDIS010000000, and
            consists of sequences JBPDIS010000001-JBPDIS010000096.
            Bacteria and source DNA available from West China Hospital, Sichuan
            University.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4. 2. 0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 255.3x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858715.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:52:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,148
            CDSs (total)                      :: 6,091
            Genes (coding)                    :: 5,966
            CDSs (with protein)               :: 5,966
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 125
            CDSs (without protein)            :: 125
            Pseudo Genes (ambiguous residues) :: 0 of 125
            Pseudo Genes (frameshifted)       :: 43 of 125
            Pseudo Genes (incomplete)         :: 95 of 125
            Pseudo Genes (internal stop)      :: 11 of 125
            Pseudo Genes (multiple problems)  :: 20 of 125
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6306425
                     /organism="Mycolicibacterium litorale"
                     /mol_type="genomic DNA"
                     /strain="NIIDNTM18"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:758802"
                     /geo_loc_name="China: Chengdu"
                     /lat_lon="30.65 N 104.06 E"
                     /collection_date="2024-12-12"
                     /collected_by="West China Hospital of Sichuan University"
WGS         JBPDIS010000001-JBPDIS010000096
WGS_SCAFLD  NZ_JBPDIS010000001-NZ_JBPDIS010000096
//
LOCUS       NZ_JBXGIG010000000   2041882 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Moraxella bovoculi strain SL23, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGIG000000000
VERSION     NZ_JBXGIG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772369
            Assembly: GCF_056855775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Moraxella bovoculi
  ORGANISM  Moraxella bovoculi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 2041882)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGIG000000000.1.
            The Moraxella bovoculi whole genome shotgun (WGS) project has the
            project accession NZ_JBXGIG000000000.  This version of the project
            (01) has the accession number NZ_JBXGIG010000000, and consists of
            sequences JBXGIG010000001-JBXGIG010000036.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855775.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:45:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,991
            CDSs (total)                      :: 1,930
            Genes (coding)                    :: 1,875
            CDSs (with protein)               :: 1,875
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 55
            CDSs (without protein)            :: 55
            Pseudo Genes (ambiguous residues) :: 0 of 55
            Pseudo Genes (frameshifted)       :: 25 of 55
            Pseudo Genes (incomplete)         :: 29 of 55
            Pseudo Genes (internal stop)      :: 16 of 55
            Pseudo Genes (multiple problems)  :: 14 of 55
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2041882
                     /organism="Moraxella bovoculi"
                     /mol_type="genomic DNA"
                     /strain="SL23"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:386891"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2023-08-01"
WGS         JBXGIG010000001-JBXGIG010000036
WGS_SCAFLD  NZ_JBXGIG010000001-NZ_JBXGIG010000036
//
LOCUS       NZ_RAPY01000000      6732474 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Sphingobacterium detergens strain CECT 7938, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RAPY00000000
VERSION     NZ_RAPY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09074751
            Assembly: GCF_003610355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sphingobacterium detergens
  ORGANISM  Sphingobacterium detergens
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.
REFERENCE   1  (bases 1 to 6732474)
  AUTHORS   Whitman,W.
  TITLE     Genomic Encyclopedia of Type Strains, Phase III (KMG-III): the
            genomes of soil and plant-associated and newly described type
            strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6732474)
  AUTHORS   Whitman,W., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-SEP-2018) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RAPY00000000.1.
            The Sphingobacterium detergens whole genome shotgun (WGS) project
            has the project accession NZ_RAPY00000000.  This version of the
            project (01) has the accession number NZ_RAPY01000000, and consists
            of sequences RAPY01000001-RAPY01000012.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10.1
            Expected Final Version :: No
            Genome Coverage        :: 106.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003610355.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:14:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,584
            CDSs (total)                      :: 5,512
            Genes (coding)                    :: 5,494
            CDSs (with protein)               :: 5,494
            Genes (RNA)                       :: 72
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 18
            CDSs (without protein)            :: 18
            Pseudo Genes (ambiguous residues) :: 0 of 18
            Pseudo Genes (frameshifted)       :: 1 of 18
            Pseudo Genes (incomplete)         :: 16 of 18
            Pseudo Genes (internal stop)      :: 1 of 18
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6732474
                     /organism="Sphingobacterium detergens"
                     /mol_type="genomic DNA"
                     /strain="CECT 7938"
                     /type_material="type strain of Sphingobacterium detergens"
                     /db_xref="taxon:1145106"
WGS         RAPY01000001-RAPY01000012
WGS_SCAFLD  NZ_RAPY01000001-NZ_RAPY01000012
//
LOCUS       NZ_JBXGHZ010000000   2030971 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Moraxella bovoculi strain SL3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGHZ000000000
VERSION     NZ_JBXGHZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772376
            Assembly: GCF_056855635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Moraxella bovoculi
  ORGANISM  Moraxella bovoculi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 2030971)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGHZ000000000.1.
            The Moraxella bovoculi whole genome shotgun (WGS) project has the
            project accession NZ_JBXGHZ000000000.  This version of the project
            (01) has the accession number NZ_JBXGHZ010000000, and consists of
            sequences JBXGHZ010000001-JBXGHZ010000024.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855635.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:45:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,976
            CDSs (total)                      :: 1,924
            Genes (coding)                    :: 1,882
            CDSs (with protein)               :: 1,882
            Genes (RNA)                       :: 52
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 18 of 42
            Pseudo Genes (incomplete)         :: 20 of 42
            Pseudo Genes (internal stop)      :: 15 of 42
            Pseudo Genes (multiple problems)  :: 9 of 42
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030971
                     /organism="Moraxella bovoculi"
                     /mol_type="genomic DNA"
                     /strain="SL3"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:386891"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2022-12-13"
WGS         JBXGHZ010000001-JBXGHZ010000024
WGS_SCAFLD  NZ_JBXGHZ010000001-NZ_JBXGHZ010000024
//
LOCUS       NZ_JADZHA010000000   4660999 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Shewanella algae strain A57, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JADZHA000000000
VERSION     NZ_JADZHA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16670436
            Assembly: GCF_017580185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Shewanella algae
  ORGANISM  Shewanella algae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
REFERENCE   1  (bases 1 to 4660999)
  AUTHORS   Martin-Rodriguez,A.J., Higdon,S.M., Thorell,K., Tellgren-Roth,C.,
            Sjoling,A., Galperin,M.Y., Krell,T. and Romling,U.
  TITLE     Comparative Genomics of Cyclic di-GMP Metabolism and Chemosensory
            Pathways in Shewanella algae Strains: Novel Bacterial Sensory
            Domains and Functional Insights into Lifestyle Regulation
  JOURNAL   mSystems 7 (2), e0151821 (2022)
   PUBMED   35311563
REFERENCE   2  (bases 1 to 4660999)
  AUTHORS   Martin-Rodriguez,A.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2020) Microbiology, Tumor and Cell Biology,
            Shewanella, Solnavagen 9, Stockholm 171 65, Sweden
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADZHA000000000.1.
            The Shewanella algae whole genome shotgun (WGS) project has the
            project accession NZ_JADZHA000000000.  This version of the project
            (01) has the accession number NZ_JADZHA010000000, and consists of
            sequences JADZHA010000001-JADZHA010000095.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-OCT-2018
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 77.50807284017868x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017580185.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:28:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,238
            CDSs (total)                      :: 4,126
            Genes (coding)                    :: 4,064
            CDSs (with protein)               :: 4,064
            Genes (RNA)                       :: 112
            rRNAs                             :: 6, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 95
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 24 of 62
            Pseudo Genes (incomplete)         :: 46 of 62
            Pseudo Genes (internal stop)      :: 6 of 62
            Pseudo Genes (multiple problems)  :: 14 of 62
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4660999
                     /organism="Shewanella algae"
                     /mol_type="genomic DNA"
                     /strain="A57"
                     /isolation_source="wound"
                     /host="Homo sapiens"
                     /db_xref="taxon:38313"
                     /geo_loc_name="France"
                     /collection_date="1980"
WGS         JADZHA010000001-JADZHA010000095
WGS_SCAFLD  NZ_JADZHA010000001-NZ_JADZHA010000095
//
LOCUS       NZ_JBSXNZ010000000   4545771 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Marinobacter sp. B-21, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXNZ000000000
VERSION     NZ_JBSXNZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312061
            Assembly: GCF_056857895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marinobacter sp. B-21
  ORGANISM  Marinobacter sp. B-21
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 4545771)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXNZ000000000.1.
            The Marinobacter sp. B-21 whole genome shotgun (WGS) project has
            the project accession NZ_JBSXNZ000000000.  This version of the
            project (01) has the accession number NZ_JBSXNZ010000000, and
            consists of sequences JBSXNZ010000001-JBSXNZ010000090.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 273.7x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857895.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:11:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,257
            CDSs (total)                      :: 4,202
            Genes (coding)                    :: 4,116
            CDSs (with protein)               :: 4,116
            Genes (RNA)                       :: 55
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 86
            CDSs (without protein)            :: 86
            Pseudo Genes (ambiguous residues) :: 0 of 86
            Pseudo Genes (frameshifted)       :: 18 of 86
            Pseudo Genes (incomplete)         :: 73 of 86
            Pseudo Genes (internal stop)      :: 5 of 86
            Pseudo Genes (multiple problems)  :: 10 of 86
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4545771
                     /organism="Marinobacter sp. B-21"
                     /mol_type="genomic DNA"
                     /strain="B-21"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472680"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.71773 N 63.86117 E"
                     /collection_date="2022-06"
WGS         JBSXNZ010000001-JBSXNZ010000090
WGS_SCAFLD  NZ_JBSXNZ010000001-NZ_JBSXNZ010000090
//
LOCUS       NZ_JBXEPW010000000   5767437 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Novosphingobium sp. BL-S-33, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXEPW000000000
VERSION     NZ_JBXEPW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53082846
            Assembly: GCF_056857025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Novosphingobium sp. BL-S-33
  ORGANISM  Novosphingobium sp. BL-S-33
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Novosphingobium.
REFERENCE   1  (bases 1 to 5767437)
  AUTHORS   Williams,N.W., Ali,T. and Boudreau,P.D.
  TITLE     Serine Palmitoyltransferase Primers Guide Isolation of
            Sphingomonadales Strains Across Diverse Environments
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5767437)
  AUTHORS   Williams,N.W., Ali,T. and Boudreau,P.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-NOV-2025) BioMolecular Sciences, Boudreau Lab, 405
            Faser Hall, University, MS 38677-1848, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEPW000000000.1.
            The Novosphingobium sp. BL-S-33 whole genome shotgun (WGS) project
            has the project accession NZ_JBXEPW000000000.  This version of the
            project (01) has the accession number NZ_JBXEPW010000000, and
            consists of sequences JBXEPW010000001-JBXEPW010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 08-SEP-2025
            Assembly Method        :: Flye v. 2.9.5-b1801
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 258x
            Sequencing Technology  :: ONT
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857025.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:34:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,127
            CDSs (total)                      :: 5,043
            Genes (coding)                    :: 4,998
            CDSs (with protein)               :: 4,998
            Genes (RNA)                       :: 84
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 45
            CDSs (without protein)            :: 45
            Pseudo Genes (ambiguous residues) :: 0 of 45
            Pseudo Genes (frameshifted)       :: 10 of 45
            Pseudo Genes (incomplete)         :: 36 of 45
            Pseudo Genes (internal stop)      :: 9 of 45
            Pseudo Genes (multiple problems)  :: 9 of 45
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5767437
                     /organism="Novosphingobium sp. BL-S-33"
                     /mol_type="genomic DNA"
                     /strain="BL-S-33"
                     /isolation_source="topsoil"
                     /db_xref="taxon:3470651"
                     /geo_loc_name="USA: Mississippi, Oxford"
                     /lat_lon="34.3646 N 89.5332 W"
                     /collection_date="2025-06-11"
WGS         JBXEPW010000001-JBXEPW010000002
WGS_SCAFLD  NZ_CM166474-NZ_CM166475
//
LOCUS       NZ_JBXGIQ010000000   2080610 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Moraxella bovoculi strain SL14, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGIQ000000000
VERSION     NZ_JBXGIQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772359
            Assembly: GCF_056855955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Moraxella bovoculi
  ORGANISM  Moraxella bovoculi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 2080610)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGIQ000000000.1.
            The Moraxella bovoculi whole genome shotgun (WGS) project has the
            project accession NZ_JBXGIQ000000000.  This version of the project
            (01) has the accession number NZ_JBXGIQ010000000, and consists of
            sequences JBXGIQ010000001-JBXGIQ010000032.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855955.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:55:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,037
            CDSs (total)                      :: 1,986
            Genes (coding)                    :: 1,935
            CDSs (with protein)               :: 1,935
            Genes (RNA)                       :: 51
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 21 of 51
            Pseudo Genes (incomplete)         :: 30 of 51
            Pseudo Genes (internal stop)      :: 16 of 51
            Pseudo Genes (multiple problems)  :: 15 of 51
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2080610
                     /organism="Moraxella bovoculi"
                     /mol_type="genomic DNA"
                     /strain="SL14"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:386891"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2023-05-15"
WGS         JBXGIQ010000001-JBXGIQ010000032
WGS_SCAFLD  NZ_JBXGIQ010000001-NZ_JBXGIQ010000032
//
LOCUS       NZ_JAMWYS010000000   4250129 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Solitalea agri strain MAHUQ-68, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAMWYS000000000
VERSION     NZ_JAMWYS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN29154599
            Assembly: GCF_023914155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Solitalea agri
  ORGANISM  Solitalea agri
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Solitalea.
REFERENCE   1  (bases 1 to 4250129)
  AUTHORS   Huq,M.A.
  TITLE     Solitalea sp. MAHUQ-68 isolated from rhizospheric soil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4250129)
  AUTHORS   Huq,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUN-2022) Food and Nutrition, Chung-Ang University,
            4726, Seodong-daero, Daedeok-myeon, Anseong-si, Gyeonggi-do 17546,
            South Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAMWYS000000000.1.
            The Solitalea agri whole genome shotgun (WGS) project has the
            project accession NZ_JAMWYS000000000.  This version of the project
            (01) has the accession number NZ_JAMWYS010000000, and consists of
            sequences JAMWYS010000001-JAMWYS010000068.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 15-MAR-2022
            Assembly Method        :: SOAPdenovo v. March 2022
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_023914155.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:47:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,666
            CDSs (total)                      :: 3,604
            Genes (coding)                    :: 3,590
            CDSs (with protein)               :: 3,590
            Genes (RNA)                       :: 62
            rRNAs                             :: 2, 3 (16S, 23S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 14
            CDSs (without protein)            :: 14
            Pseudo Genes (ambiguous residues) :: 0 of 14
            Pseudo Genes (frameshifted)       :: 2 of 14
            Pseudo Genes (incomplete)         :: 11 of 14
            Pseudo Genes (internal stop)      :: 1 of 14
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4250129
                     /organism="Solitalea agri"
                     /mol_type="genomic DNA"
                     /strain="MAHUQ-68"
                     /isolation_source="soil"
                     /type_material="type strain of Solitalea agri"
                     /db_xref="taxon:2953739"
                     /geo_loc_name="South Korea"
                     /collection_date="2020-10-20"
WGS         JAMWYS010000001-JAMWYS010000068
WGS_SCAFLD  NZ_JAMWYS010000001-NZ_JAMWYS010000068
//
LOCUS       NZ_JBSORJ010000000   2702235 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mannheimia haemolytica strain BC2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSORJ000000000
VERSION     NZ_JBSORJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53420729
            Assembly: GCF_056857975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2702235)
  AUTHORS   Nielsen,D.W. and Holthausen,D.J.
  TITLE     Genomic characterization of Mycoplasma bovis, Mannheimia
            haemolytica, and bovine viral diarrhea virus 1 from a bovine
            respiratory disease complex case
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2702235)
  AUTHORS   Nielsen,D.W. and Holthausen,D.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) Ruminant Diseases and Immunology Research
            Unit, USDA/ARS/National Animal Disease Center, 1920 Dayton Ave,
            Ames, IA 50010, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSORJ000000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_JBSORJ000000000.  This version of the
            project (01) has the accession number NZ_JBSORJ010000000, and
            consists of sequence JBSORJ010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Daniel Nielsen, 1920 Dayton
            Ave., Ames, IA 50010.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-FEB-2025
            Assembly Method        :: Flye v. 2.9.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 90.0x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857975.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:05:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,794
            CDSs (total)                      :: 2,705
            Genes (coding)                    :: 2,622
            CDSs (with protein)               :: 2,622
            Genes (RNA)                       :: 89
            rRNAs                             :: 8, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 83
            CDSs (without protein)            :: 83
            Pseudo Genes (ambiguous residues) :: 0 of 83
            Pseudo Genes (frameshifted)       :: 39 of 83
            Pseudo Genes (incomplete)         :: 40 of 83
            Pseudo Genes (internal stop)      :: 8 of 83
            Pseudo Genes (multiple problems)  :: 4 of 83
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2702235
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="BC2"
                     /isolation_source="lung"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA"
                     /collection_date="2020-10-30"
WGS         JBSORJ010000001
WGS_SCAFLD  NZ_CM166480
//
LOCUS       NZ_JBNCKA010000000   4561008 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Shigella sonnei strain ICIS41, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBNCKA000000000
VERSION     NZ_JBNCKA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47217783
            Assembly: GCF_049842455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Shigella sonnei
  ORGANISM  Shigella sonnei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4561008)
  AUTHORS   Borisov,S.D., Plotnikov,A.O., Inchagova,K.S. and Khlopko,Y.A.
  TITLE     Persistence of microorganisms Science Resource Center of Institute
            for Cellular and Intracellular Symbiosis UB RAS, Pionerskaya st.,
            11, Orenburg 460000, RUSSIA
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4561008)
  AUTHORS   Borisov,S.D., Plotnikov,A.O., Inchagova,K.S. and Khlopko,Y.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAR-2025) 'Persistence of Microorganisms' Science
            Resource Center, Institute for Cellular and Intracellular Symbiosis
            UB RAS, Pionerskaya, 11, Orenburg 460000, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCKA000000000.1.
            The Shigella sonnei whole genome shotgun (WGS) project has the
            project accession NZ_JBNCKA000000000.  This version of the project
            (01) has the accession number NZ_JBNCKA010000000, and consists of
            sequences JBNCKA010000001-JBNCKA010000558.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 31-JAN-2025
            Assembly Method        :: Unicycler v. 0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50.7x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049842455.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:12:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,810
            CDSs (total)                      :: 4,712
            Genes (coding)                    :: 4,186
            CDSs (with protein)               :: 4,186
            Genes (RNA)                       :: 98
            rRNAs                             :: 2, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 526
            CDSs (without protein)            :: 526
            Pseudo Genes (ambiguous residues) :: 0 of 526
            Pseudo Genes (frameshifted)       :: 174 of 526
            Pseudo Genes (incomplete)         :: 312 of 526
            Pseudo Genes (internal stop)      :: 105 of 526
            Pseudo Genes (multiple problems)  :: 60 of 526
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4561008
                     /organism="Shigella sonnei"
                     /mol_type="genomic DNA"
                     /strain="ICIS41"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:624"
                     /geo_loc_name="Russia: The Orenburg"
                     /collection_date="2018-11"
WGS         JBNCKA010000001-JBNCKA010000558
WGS_SCAFLD  NZ_JBNCKA010000001-NZ_JBNCKA010000558
//
LOCUS       NZ_JBNCKB010000000   4436075 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Shigella sonnei strain ICIS43, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBNCKB000000000
VERSION     NZ_JBNCKB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47217787
            Assembly: GCF_049842495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Shigella sonnei
  ORGANISM  Shigella sonnei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4436075)
  AUTHORS   Borisov,S.D., Plotnikov,A.O., Inchagova,K.S. and Khlopko,Y.A.
  TITLE     Persistence of microorganisms Science Resource Center of Institute
            for Cellular and Intracellular Symbiosis UB RAS, Pionerskaya st.,
            11, Orenburg 460000, RUSSIA
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4436075)
  AUTHORS   Borisov,S.D., Plotnikov,A.O., Inchagova,K.S. and Khlopko,Y.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAR-2025) 'Persistence of Microorganisms' Science
            Resource Center, Institute for Cellular and Intracellular Symbiosis
            UB RAS, Pionerskaya, 11, Orenburg 460000, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCKB000000000.1.
            The Shigella sonnei whole genome shotgun (WGS) project has the
            project accession NZ_JBNCKB000000000.  This version of the project
            (01) has the accession number NZ_JBNCKB010000000, and consists of
            sequences JBNCKB010000001-JBNCKB010000488.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 07-FEB-2025
            Assembly Method        :: Unicycler v. 0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 33.4x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049842495.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:18:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,626
            CDSs (total)                      :: 4,531
            Genes (coding)                    :: 4,086
            CDSs (with protein)               :: 4,086
            Genes (RNA)                       :: 95
            rRNAs                             :: 2, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 445
            CDSs (without protein)            :: 445
            Pseudo Genes (ambiguous residues) :: 0 of 445
            Pseudo Genes (frameshifted)       :: 146 of 445
            Pseudo Genes (incomplete)         :: 244 of 445
            Pseudo Genes (internal stop)      :: 95 of 445
            Pseudo Genes (multiple problems)  :: 38 of 445
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4436075
                     /organism="Shigella sonnei"
                     /mol_type="genomic DNA"
                     /strain="ICIS43"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:624"
                     /geo_loc_name="Russia: The Orenburg"
                     /collection_date="2018-11"
WGS         JBNCKB010000001-JBNCKB010000488
WGS_SCAFLD  NZ_JBNCKB010000001-NZ_JBNCKB010000488
//
LOCUS       NZ_JBVAOL010000000   6439165 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methylobacterium oryzae strain Rosa1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBVAOL000000000
VERSION     NZ_JBVAOL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN55333556
            Assembly: GCF_056866035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Methylobacterium oryzae
  ORGANISM  Methylobacterium oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1  (bases 1 to 6439165)
  AUTHORS   Huergo,L.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2026) Setor Litoral, Federal University Parana,
            Rua Governador Pedro Viriato Parigot de Souza, 512, Matinhos, PR
            83280000, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVAOL000000000.1.
            The Methylobacterium oryzae whole genome shotgun (WGS) project has
            the project accession NZ_JBVAOL000000000.  This version of the
            project (01) has the accession number NZ_JBVAOL010000000, and
            consists of sequences JBVAOL010000001-JBVAOL010000167.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: OCT-2005
            Assembly Method        :: SPAdes v. 3 15 4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 134.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056866035.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:10:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,212
            CDSs (total)                      :: 6,152
            Genes (coding)                    :: 6,015
            CDSs (with protein)               :: 6,015
            Genes (RNA)                       :: 60
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 137
            CDSs (without protein)            :: 137
            Pseudo Genes (ambiguous residues) :: 0 of 137
            Pseudo Genes (frameshifted)       :: 33 of 137
            Pseudo Genes (incomplete)         :: 111 of 137
            Pseudo Genes (internal stop)      :: 14 of 137
            Pseudo Genes (multiple problems)  :: 18 of 137
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6439165
                     /organism="Methylobacterium oryzae"
                     /mol_type="genomic DNA"
                     /strain="Rosa1"
                     /isolation_source="Air sample"
                     /db_xref="taxon:334852"
                     /geo_loc_name="Brazil"
                     /lat_lon="25.160 S 48.30 W"
                     /altitude="2 m"
                     /collection_date="2022-05"
                     /collected_by="Luciano Huergo"
WGS         JBVAOL010000001-JBVAOL010000167
WGS_SCAFLD  NZ_JBVAOL010000001-NZ_JBVAOL010000167
//
LOCUS       NZ_JBXEPV010000000   5955795 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Novosphingobium sp. BL-S-34, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXEPV000000000
VERSION     NZ_JBXEPV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53082847
            Assembly: GCF_056857015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Novosphingobium sp. BL-S-34
  ORGANISM  Novosphingobium sp. BL-S-34
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Novosphingobium.
REFERENCE   1  (bases 1 to 5955795)
  AUTHORS   Williams,N.W., Ali,T. and Boudreau,P.D.
  TITLE     Serine Palmitoyltransferase Primers Guide Isolation of
            Sphingomonadales Strains Across Diverse Environments
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5955795)
  AUTHORS   Williams,N.W., Ali,T. and Boudreau,P.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-NOV-2025) BioMolecular Sciences, Boudreau Lab, 405
            Faser Hall, University, MS 38677-1848, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEPV000000000.1.
            The Novosphingobium sp. BL-S-34 whole genome shotgun (WGS) project
            has the project accession NZ_JBXEPV000000000.  This version of the
            project (01) has the accession number NZ_JBXEPV010000000, and
            consists of sequences JBXEPV010000001-JBXEPV010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 05-SEP-2025
            Assembly Method        :: Flye v. 2.9.5-b1801
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: ONT
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857015.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,323
            CDSs (total)                      :: 5,239
            Genes (coding)                    :: 5,168
            CDSs (with protein)               :: 5,168
            Genes (RNA)                       :: 84
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 36 of 71
            Pseudo Genes (incomplete)         :: 48 of 71
            Pseudo Genes (internal stop)      :: 11 of 71
            Pseudo Genes (multiple problems)  :: 21 of 71
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5955795
                     /organism="Novosphingobium sp. BL-S-34"
                     /mol_type="genomic DNA"
                     /strain="BL-S-34"
                     /isolation_source="topsoil"
                     /db_xref="taxon:3470650"
                     /geo_loc_name="USA: Mississippi, Oxford"
                     /lat_lon="34.3646 N 89.5332 W"
                     /collection_date="2025-06-09"
WGS         JBXEPV010000001-JBXEPV010000003
WGS_SCAFLD  NZ_CM166472-NZ_CM166473
WGS_SCAFLD  NZ_JBXEPV010000003
//
LOCUS       NZ_JBXEPC010000000   7093090 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas aeruginosa strain SRMPA4678, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXEPC000000000
VERSION     NZ_JBXEPC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54807461
            Assembly: GCF_056858515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7093090)
  AUTHORS   Li,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Laboratory Center, Zhejiang Provincial
            Peoples Hospital, Shangtang Road, Hangzhou, Zhejiang province
            310006, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEPC000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBXEPC000000000.  This version of the
            project (01) has the accession number NZ_JBXEPC010000000, and
            consists of sequence JBXEPC010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858515.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:58:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,703
            CDSs (total)                      :: 6,618
            Genes (coding)                    :: 6,536
            CDSs (with protein)               :: 6,536
            Genes (RNA)                       :: 85
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 27 of 82
            Pseudo Genes (incomplete)         :: 57 of 82
            Pseudo Genes (internal stop)      :: 6 of 82
            Pseudo Genes (multiple problems)  :: 7 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7093090
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="SRMPA4678"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="China: Hangzhou"
                     /collection_date="2024"
                     /collected_by="Xi Li"
WGS         JBXEPC010000001
WGS_SCAFLD  NZ_CM166497
//
LOCUS       NZ_JBXPIY010000000   5003021 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Patulibacter ginsengiterrae strain KCTC 19427, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXPIY000000000
VERSION     NZ_JBXPIY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN57274865
            Assembly: GCF_056863295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Patulibacter ginsengiterrae
  ORGANISM  Patulibacter ginsengiterrae
            Bacteria; Bacillati; Actinomycetota; Thermoleophilia;
            Solirubrobacterales; Patulibacteraceae; Patulibacter.
REFERENCE   1  (bases 1 to 5003021)
  AUTHORS   Li,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2026) Xinjiang Institute of Ecology and
            Geography, Chinese Academy of Sciences, No. 818, Beijing South
            Road, Urumqi, Xinjiang 830000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXPIY000000000.1.
            The Patulibacter ginsengiterrae whole genome shotgun (WGS) project
            has the project accession NZ_JBXPIY000000000.  This version of the
            project (01) has the accession number NZ_JBXPIY010000000, and
            consists of sequences JBXPIY010000001-JBXPIY010000019.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 976.7x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056863295.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:59:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,438
            CDSs (total)                      :: 4,382
            Genes (coding)                    :: 4,343
            CDSs (with protein)               :: 4,343
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 2 of 39
            Pseudo Genes (incomplete)         :: 37 of 39
            Pseudo Genes (internal stop)      :: 0 of 39
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5003021
                     /organism="Patulibacter ginsengiterrae"
                     /mol_type="genomic DNA"
                     /strain="KCTC 19427"
                     /isolation_source="field soil [ENVO:00005755]"
                     /type_material="type strain of Patulibacter
                     ginsengiterrae"
                     /db_xref="taxon:556890"
                     /geo_loc_name="South Korea"
                     /collection_date="2012"
WGS         JBXPIY010000001-JBXPIY010000019
WGS_SCAFLD  NZ_JBXPIY010000001-NZ_JBXPIY010000019
//
LOCUS       NZ_JBXEPB010000000   7079721 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas aeruginosa strain SRMPA1270, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXEPB000000000
VERSION     NZ_JBXEPB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54807462
            Assembly: GCF_056858475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7079721)
  AUTHORS   Li,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Laboratory Center, Zhejiang Provincial
            Peoples Hospital, Shangtang Road, Hangzhou, Zhejiang province
            310006, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEPB000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBXEPB000000000.  This version of the
            project (01) has the accession number NZ_JBXEPB010000000, and
            consists of sequences JBXEPB010000001-JBXEPB010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858475.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:39:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,716
            CDSs (total)                      :: 6,634
            Genes (coding)                    :: 6,517
            CDSs (with protein)               :: 6,517
            Genes (RNA)                       :: 82
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 55 of 117
            Pseudo Genes (incomplete)         :: 59 of 117
            Pseudo Genes (internal stop)      :: 11 of 117
            Pseudo Genes (multiple problems)  :: 7 of 117
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7079721
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="SRMPA1270"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="China: Hangzhou"
                     /collection_date="2024"
                     /collected_by="Xi Li"
WGS         JBXEPB010000001-JBXEPB010000002
WGS_SCAFLD  NZ_JBXEPB010000001-NZ_JBXEPB010000002
//
LOCUS       NZ_JBXEPI010000000   2466504 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pasteurella multocida strain 19BRD-112, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXEPI000000000
VERSION     NZ_JBXEPI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53097270
            Assembly: GCF_056858035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pasteurella multocida
  ORGANISM  Pasteurella multocida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Pasteurella.
REFERENCE   1  (bases 1 to 2466504)
  AUTHORS   Lee,G.X.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) School of Biological Science, The
            University of Adelaide, Adelaide, Adelaide SA 5005, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEPI000000000.1.
            The Pasteurella multocida whole genome shotgun (WGS) project has
            the project accession NZ_JBXEPI000000000.  This version of the
            project (01) has the accession number NZ_JBXEPI010000000, and
            consists of sequence JBXEPI010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 26-JUN-2025
            Assembly Method        :: Flye v. 2.9.6
            Assembly Name          :: 19BRD-112
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 229x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858035.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,426
            CDSs (total)                      :: 2,343
            Genes (coding)                    :: 2,327
            CDSs (with protein)               :: 2,327
            Genes (RNA)                       :: 83
            rRNAs                             :: 7, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 3 of 16
            Pseudo Genes (incomplete)         :: 7 of 16
            Pseudo Genes (internal stop)      :: 7 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2466504
                     /organism="Pasteurella multocida"
                     /mol_type="genomic DNA"
                     /strain="19BRD-112"
                     /isolation_source="lung"
                     /host="cattle"
                     /db_xref="taxon:747"
                     /geo_loc_name="Australia: New South Wales"
                     /collection_date="2019"
                     /collected_by="ACARE"
WGS         JBXEPI010000001
WGS_SCAFLD  NZ_CM166484
//
LOCUS       NZ_JBSXXH010000000   2362800 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pasteurella multocida strain PM1205, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSXXH000000000
VERSION     NZ_JBSXXH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53889761
            Assembly: GCF_056862735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pasteurella multocida
  ORGANISM  Pasteurella multocida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Pasteurella.
REFERENCE   1  (bases 1 to 2362800)
  AUTHORS   Murigneux,V., Zaugg,J. and Omaleki,L.
  TITLE     Exploration of Pasteurella multocida public data reveals extensive
            lipopolysaccharide outer core biosynthesis loci subtype variants
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2362800)
  AUTHORS   Omaleki,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-DEC-2025) Queensland Alliance for Agriculture and
            Food Innovations, The University of Queensland, The University of
            Queensland, St Lucia, QLD 4067, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXXH000000000.1.
            The Pasteurella multocida whole genome shotgun (WGS) project has
            the project accession NZ_JBSXXH000000000.  This version of the
            project (01) has the accession number NZ_JBSXXH010000000, and
            consists of sequences JBSXXH010000001-JBSXXH010000031.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862735.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:53:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,331
            CDSs (total)                      :: 2,269
            Genes (coding)                    :: 2,242
            CDSs (with protein)               :: 2,242
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 2 (5S, 16S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 9 of 27
            Pseudo Genes (incomplete)         :: 12 of 27
            Pseudo Genes (internal stop)      :: 6 of 27
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2362800
                     /organism="Pasteurella multocida"
                     /mol_type="genomic DNA"
                     /strain="PM1205"
                     /isolation_source="liver"
                     /host="Dromaius novaehollandiae"
                     /db_xref="taxon:747"
                     /geo_loc_name="Australia"
                     /collection_date="2007"
                     /collected_by="Pat Blackall"
WGS         JBSXXH010000001-JBSXXH010000031
WGS_SCAFLD  NZ_JBSXXH010000001-NZ_JBSXXH010000031
//
LOCUS       NZ_JBSXNO010000000   3441674 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Qipengyuania sp. L-14Y, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXNO000000000
VERSION     NZ_JBSXNO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312072
            Assembly: GCF_056857675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Qipengyuania sp. L-14Y
  ORGANISM  Qipengyuania sp. L-14Y
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Qipengyuania.
REFERENCE   1  (bases 1 to 3441674)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXNO000000000.1.
            The Qipengyuania sp. L-14Y whole genome shotgun (WGS) project has
            the project accession NZ_JBSXNO000000000.  This version of the
            project (01) has the accession number NZ_JBSXNO010000000, and
            consists of sequences JBSXNO010000001-JBSXNO010000035.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 366.54x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857675.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:09:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,326
            CDSs (total)                      :: 3,274
            Genes (coding)                    :: 3,230
            CDSs (with protein)               :: 3,230
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 8 of 44
            Pseudo Genes (incomplete)         :: 34 of 44
            Pseudo Genes (internal stop)      :: 7 of 44
            Pseudo Genes (multiple problems)  :: 5 of 44
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3441674
                     /organism="Qipengyuania sp. L-14Y"
                     /mol_type="genomic DNA"
                     /strain="L-14Y"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472691"
                     /geo_loc_name="Indian Ocean: Southwestern Indian Ridge"
                     /lat_lon="37.93805 S 49.26156 E"
                     /collection_date="2024-05"
WGS         JBSXNO010000001-JBSXNO010000035
WGS_SCAFLD  NZ_JBSXNO010000001-NZ_JBSXNO010000035
//
LOCUS       NZ_JBSXXI010000000   2303614 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pasteurella multocida strain PM1047, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSXXI000000000
VERSION     NZ_JBSXXI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53889760
            Assembly: GCF_056862765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pasteurella multocida
  ORGANISM  Pasteurella multocida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Pasteurella.
REFERENCE   1  (bases 1 to 2303614)
  AUTHORS   Murigneux,V., Zaugg,J. and Omaleki,L.
  TITLE     Exploration of Pasteurella multocida public data reveals extensive
            lipopolysaccharide outer core biosynthesis loci subtype variants
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2303614)
  AUTHORS   Omaleki,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-DEC-2025) Queensland Alliance for Agriculture and
            Food Innovations, The University of Queensland, The University of
            Queensland, St Lucia, QLD 4067, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXXI000000000.1.
            The Pasteurella multocida whole genome shotgun (WGS) project has
            the project accession NZ_JBSXXI000000000.  This version of the
            project (01) has the accession number NZ_JBSXXI010000000, and
            consists of sequences JBSXXI010000001-JBSXXI010000021.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862765.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:54:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,231
            CDSs (total)                      :: 2,167
            Genes (coding)                    :: 2,160
            CDSs (with protein)               :: 2,160
            Genes (RNA)                       :: 64
            rRNAs                             :: 3, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 1 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2303614
                     /organism="Pasteurella multocida"
                     /mol_type="genomic DNA"
                     /strain="PM1047"
                     /isolation_source="lung"
                     /host="Sus scrofa domesticus"
                     /db_xref="taxon:747"
                     /geo_loc_name="Australia"
                     /collection_date="2003"
                     /collected_by="Pat Blackall"
WGS         JBSXXI010000001-JBSXXI010000021
WGS_SCAFLD  NZ_JBSXXI010000001-NZ_JBSXXI010000021
//
LOCUS       NZ_JBWXTH010000000   5085673 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas sp. FA-1, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWXTH000000000
VERSION     NZ_JBWXTH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN57124393
            Assembly: GCF_056856075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas sp. FA-1
  ORGANISM  Pseudomonas sp. FA-1
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 5085673)
  AUTHORS   Alanazi,F.
  TITLE     Draft genome of Pseudomonas sp. FA-1, a tick-associated bacterium
            from Hyalomma dromedarii in Saudi Arabia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5085673)
  AUTHORS   Alanazi,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-APR-2026) Clinical Laboratory Sciences, King Saud
            University, 8185 al malha - Dhahrat Laban Dist., Riyadh, Riyadh
            13787, Saudi Arabia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWXTH000000000.1.
            The Pseudomonas sp. FA-1 whole genome shotgun (WGS) project has the
            project accession NZ_JBWXTH000000000.  This version of the project
            (01) has the accession number NZ_JBWXTH010000000, and consists of
            sequences JBWXTH010000001-JBWXTH010000097.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Dr. Fuad Alanazi, Department
            of Clinical Laboratory Sciences, College of Applied Medical
            Sciences, King Saud University, Riyadh 12372, Saudi Arabia.
            foalanazi@ksu.edu.sa. Note: original isolate being verified in
            frozen stock collection.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-APR-2026
            Assembly Method        :: SPAdes v. 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 430.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856075.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:11:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,717
            CDSs (total)                      :: 4,641
            Genes (coding)                    :: 4,565
            CDSs (with protein)               :: 4,565
            Genes (RNA)                       :: 76
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 66
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 12 of 76
            Pseudo Genes (incomplete)         :: 68 of 76
            Pseudo Genes (internal stop)      :: 3 of 76
            Pseudo Genes (multiple problems)  :: 7 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5085673
                     /organism="Pseudomonas sp. FA-1"
                     /mol_type="genomic DNA"
                     /strain="FA-1"
                     /isolation_source="Internal tissues of Hyalomma dromedarii
                     tick collected from Camelus dromedarius, Hail Province,
                     Saudi Arabia"
                     /host="Hyalomma dromedarii"
                     /db_xref="taxon:3699025"
                     /geo_loc_name="Saudi Arabia: Hail"
                     /lat_lon="27.52 N 41.69 E"
                     /collection_date="2024-10"
WGS         JBWXTH010000001-JBWXTH010000097
WGS_SCAFLD  NZ_JBWXTH010000001-NZ_JBWXTH010000097
//
LOCUS       NZ_JBXGJV010000000   6031870 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas paracarnis strain COLMIS 147, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGJV000000000
VERSION     NZ_JBXGJV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56786084
            Assembly: GCF_056858415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas paracarnis
  ORGANISM  Pseudomonas paracarnis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6031870)
  AUTHORS   Escobar,M.C., Nino-Garcia,J.P., Acosta-Gonzalez,A.,
            Diaz-Cardenas,C., Vasquez,Y., Marques,S. and Cardona,G.
  TITLE     Genome-Based Insights into Metal Co-Resistance in Amazonian
            Mercury-Resistant Bacteria: Ecological Lifestyle and Biosafety
            Implications for Bioremediation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6031870)
  AUTHORS   Escobar,M.C., Nino-Garcia,J.P., Acosta-Gonzalez,A.,
            Diaz-Cardenas,C., Vasquez,Y., Marques,S. and Cardona,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAR-2026) Biotechnology and Genetic Resources
            Laboratory, Sinchi Amazonic Institute of Scientific Research, Cl.
            20 #5-44, Bogota, Cundinamarca 111321, Colombia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGJV000000000.1.
            The Pseudomonas paracarnis whole genome shotgun (WGS) project has
            the project accession NZ_JBXGJV000000000.  This version of the
            project (01) has the accession number NZ_JBXGJV010000000, and
            consists of sequence JBXGJV010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 31-JAN-2023
            Assembly Method        :: CANU v. 2.1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 468x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858415.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:29:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,541
            CDSs (total)                      :: 5,450
            Genes (coding)                    :: 5,323
            CDSs (with protein)               :: 5,323
            Genes (RNA)                       :: 91
            rRNAs                             :: 7, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 127
            CDSs (without protein)            :: 127
            Pseudo Genes (ambiguous residues) :: 0 of 127
            Pseudo Genes (frameshifted)       :: 75 of 127
            Pseudo Genes (incomplete)         :: 57 of 127
            Pseudo Genes (internal stop)      :: 5 of 127
            Pseudo Genes (multiple problems)  :: 10 of 127
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6031870
                     /organism="Pseudomonas paracarnis"
                     /mol_type="genomic DNA"
                     /strain="COLMIS 147"
                     /isolation_source="sediment"
                     /db_xref="taxon:2750625"
                     /geo_loc_name="Colombia: Tarapaca"
                     /collection_date="2016-06-27"
WGS         JBXGJV010000001
WGS_SCAFLD  NZ_JBXGJV010000001
//
LOCUS       NZ_JBSXOE010000000   4127657 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Roseovarius sp. B-10, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXOE000000000
VERSION     NZ_JBSXOE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312056
            Assembly: GCF_056859295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Roseovarius sp. B-10
  ORGANISM  Roseovarius sp. B-10
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Roseovarius.
REFERENCE   1  (bases 1 to 4127657)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXOE000000000.1.
            The Roseovarius sp. B-10 whole genome shotgun (WGS) project has the
            project accession NZ_JBSXOE000000000.  This version of the project
            (01) has the accession number NZ_JBSXOE010000000, and consists of
            sequences JBSXOE010000001-JBSXOE010000046.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 309.78x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859295.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:24:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,194
            CDSs (total)                      :: 4,145
            Genes (coding)                    :: 4,057
            CDSs (with protein)               :: 4,057
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 88
            CDSs (without protein)            :: 88
            Pseudo Genes (ambiguous residues) :: 0 of 88
            Pseudo Genes (frameshifted)       :: 18 of 88
            Pseudo Genes (incomplete)         :: 76 of 88
            Pseudo Genes (internal stop)      :: 8 of 88
            Pseudo Genes (multiple problems)  :: 13 of 88
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4127657
                     /organism="Roseovarius sp. B-10"
                     /mol_type="genomic DNA"
                     /strain="B-10"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472675"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.71773 N 63.86117 E"
                     /collection_date="2022-06"
WGS         JBSXOE010000001-JBSXOE010000046
WGS_SCAFLD  NZ_JBSXOE010000001-NZ_JBSXOE010000046
//
LOCUS       NZ_JBXEPL010000000   2385230 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pasteurella multocida strain 19BRD-003, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXEPL000000000
VERSION     NZ_JBXEPL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53097267
            Assembly: GCF_056858095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pasteurella multocida
  ORGANISM  Pasteurella multocida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Pasteurella.
REFERENCE   1  (bases 1 to 2385230)
  AUTHORS   Lee,G.X.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) School of Biological Science, The
            University of Adelaide, Adelaide, Adelaide SA 5005, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEPL000000000.1.
            The Pasteurella multocida whole genome shotgun (WGS) project has
            the project accession NZ_JBXEPL000000000.  This version of the
            project (01) has the accession number NZ_JBXEPL010000000, and
            consists of sequence JBXEPL010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 26-JUN-2025
            Assembly Method        :: Flye v. 2.9.6
            Assembly Name          :: 19BRD-003
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 38x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858095.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:06:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,308
            CDSs (total)                      :: 2,223
            Genes (coding)                    :: 2,207
            CDSs (with protein)               :: 2,207
            Genes (RNA)                       :: 85
            rRNAs                             :: 7, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 5 of 16
            Pseudo Genes (incomplete)         :: 5 of 16
            Pseudo Genes (internal stop)      :: 7 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2385230
                     /organism="Pasteurella multocida"
                     /mol_type="genomic DNA"
                     /strain="19BRD-003"
                     /isolation_source="lung"
                     /host="cattle"
                     /db_xref="taxon:747"
                     /geo_loc_name="Australia: South Australia"
                     /collection_date="2019"
                     /collected_by="ACARE"
WGS         JBXEPL010000001
WGS_SCAFLD  NZ_CM166486
//
LOCUS       NZ_JBSXOM010000000   3434381 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Qipengyuania sp. L-5Y, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXOM000000000
VERSION     NZ_JBSXOM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312086
            Assembly: GCF_056859455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Qipengyuania sp. L-5Y
  ORGANISM  Qipengyuania sp. L-5Y
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Qipengyuania.
REFERENCE   1  (bases 1 to 3434381)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXOM000000000.1.
            The Qipengyuania sp. L-5Y whole genome shotgun (WGS) project has
            the project accession NZ_JBSXOM000000000.  This version of the
            project (01) has the accession number NZ_JBSXOM010000000, and
            consists of sequences JBSXOM010000001-JBSXOM010000032.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 353.24x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859455.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:54:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,322
            CDSs (total)                      :: 3,270
            Genes (coding)                    :: 3,227
            CDSs (with protein)               :: 3,227
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 6 of 43
            Pseudo Genes (incomplete)         :: 35 of 43
            Pseudo Genes (internal stop)      :: 7 of 43
            Pseudo Genes (multiple problems)  :: 5 of 43
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3434381
                     /organism="Qipengyuania sp. L-5Y"
                     /mol_type="genomic DNA"
                     /strain="L-5Y"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472705"
                     /geo_loc_name="Indian Ocean: Southwestern Indian Ridge"
                     /lat_lon="37.91465 S 49.28191 E"
                     /collection_date="2024-05"
WGS         JBSXOM010000001-JBSXOM010000032
WGS_SCAFLD  NZ_JBSXOM010000001-NZ_JBSXOM010000032
//
LOCUS       NZ_JBXEPJ010000000   2466504 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pasteurella multocida strain 19BRD-106, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXEPJ000000000
VERSION     NZ_JBXEPJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53097269
            Assembly: GCF_056858055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pasteurella multocida
  ORGANISM  Pasteurella multocida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Pasteurella.
REFERENCE   1  (bases 1 to 2466504)
  AUTHORS   Lee,G.X.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) School of Biological Science, The
            University of Adelaide, Adelaide, Adelaide SA 5005, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEPJ000000000.1.
            The Pasteurella multocida whole genome shotgun (WGS) project has
            the project accession NZ_JBXEPJ000000000.  This version of the
            project (01) has the accession number NZ_JBXEPJ010000000, and
            consists of sequence JBXEPJ010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 26-JUN-2025
            Assembly Method        :: Flye v. 2.9.6
            Assembly Name          :: 19BRD-106
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 387x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858055.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:03:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,426
            CDSs (total)                      :: 2,343
            Genes (coding)                    :: 2,327
            CDSs (with protein)               :: 2,327
            Genes (RNA)                       :: 83
            rRNAs                             :: 7, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 3 of 16
            Pseudo Genes (incomplete)         :: 7 of 16
            Pseudo Genes (internal stop)      :: 7 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2466504
                     /organism="Pasteurella multocida"
                     /mol_type="genomic DNA"
                     /strain="19BRD-106"
                     /isolation_source="lung"
                     /host="cattle"
                     /db_xref="taxon:747"
                     /geo_loc_name="Australia: New South Wales"
                     /collection_date="2019"
                     /collected_by="ACARE"
WGS         JBXEPJ010000001
WGS_SCAFLD  NZ_CM166483
//
LOCUS       NZ_JBXEPE010000000   7227093 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas aeruginosa strain SRMPA3740, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXEPE000000000
VERSION     NZ_JBXEPE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54807459
            Assembly: GCF_056858535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7227093)
  AUTHORS   Li,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Laboratory Center, Zhejiang Provincial
            Peoples Hospital, Shangtang Road, Hangzhou, Zhejiang province
            310006, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEPE000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBXEPE000000000.  This version of the
            project (01) has the accession number NZ_JBXEPE010000000, and
            consists of sequence JBXEPE010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858535.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:59:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,850
            CDSs (total)                      :: 6,767
            Genes (coding)                    :: 6,683
            CDSs (with protein)               :: 6,683
            Genes (RNA)                       :: 83
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 84
            CDSs (without protein)            :: 84
            Pseudo Genes (ambiguous residues) :: 0 of 84
            Pseudo Genes (frameshifted)       :: 23 of 84
            Pseudo Genes (incomplete)         :: 63 of 84
            Pseudo Genes (internal stop)      :: 6 of 84
            Pseudo Genes (multiple problems)  :: 7 of 84
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7227093
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="SRMPA3740"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="China: Hangzhou"
                     /collection_date="2023"
                     /collected_by="Xi Li"
WGS         JBXEPE010000001
WGS_SCAFLD  NZ_CM166498
//
LOCUS       NZ_JBXFXF010000000   5755379 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Priestia megaterium strain HHY-1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXFXF000000000
VERSION     NZ_JBXFXF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN57232961
            Assembly: GCF_056856735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Priestia.
REFERENCE   1  (bases 1 to 5755379)
  AUTHORS   Yuan,H., Yuan,Y. and Yi,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-APR-2026) Bioengineering Laboratory, Institute of
            Biology Hebei Academy of Sciences, 46 Youyi South Street,
            Shijiazhuang 050081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFXF000000000.1.
            The Priestia megaterium whole genome shotgun (WGS) project has the
            project accession NZ_JBXFXF000000000.  This version of the project
            (01) has the accession number NZ_JBXFXF010000000, and consists of
            sequences JBXFXF010000001-JBXFXF010000010.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. v2.9.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 432.0x
            Sequencing Technology  :: Illumina NovaSeq; PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856735.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:21:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,055
            CDSs (total)                      :: 5,870
            Genes (coding)                    :: 5,805
            CDSs (with protein)               :: 5,805
            Genes (RNA)                       :: 185
            rRNAs                             :: 15, 13, 13 (5S, 16S, 23S)
            complete rRNAs                    :: 15, 13, 13 (5S, 16S, 23S)
            tRNAs                             :: 136
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 14 of 66
            Pseudo Genes (incomplete)         :: 48 of 66
            Pseudo Genes (internal stop)      :: 10 of 66
            Pseudo Genes (multiple problems)  :: 7 of 66
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5755379
                     /organism="Priestia megaterium"
                     /mol_type="genomic DNA"
                     /strain="HHY-1"
                     /isolation_source="soil"
                     /db_xref="taxon:1404"
                     /geo_loc_name="China: Huanghua"
                     /collection_date="2024-10"
WGS         JBXFXF010000001-JBXFXF010000010
WGS_SCAFLD  NZ_CM166464
WGS_SCAFLD  NZ_JBXFXF010000002-NZ_JBXFXF010000010
//
LOCUS       NZ_JBXEOW010000000   7145232 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Sinorhizobium meliloti strain AK83, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXEOW000000000
VERSION     NZ_JBXEOW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54974022
            Assembly: GCF_056858675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7145232)
  AUTHORS   Coscione,F., Vaccaro,F., Fagorzi,C. and Mengoni,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JAN-2026) Biology, University of Florence, Via
            Madonna del Piano, 6, Sesto Fiorentino 50019, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEOW000000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_JBXEOW000000000.  This version of the
            project (01) has the accession number NZ_JBXEOW010000000, and
            consists of sequences JBXEOW010000001-JBXEOW010000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 27-JAN-2025
            Assembly Method        :: Flye v. v2.9.6-b1802
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: PacBio Revio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858675.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:34:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,997
            CDSs (total)                      :: 6,928
            Genes (coding)                    :: 6,544
            CDSs (with protein)               :: 6,544
            Genes (RNA)                       :: 69
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 384
            CDSs (without protein)            :: 384
            Pseudo Genes (ambiguous residues) :: 0 of 384
            Pseudo Genes (frameshifted)       :: 251 of 384
            Pseudo Genes (incomplete)         :: 232 of 384
            Pseudo Genes (internal stop)      :: 40 of 384
            Pseudo Genes (multiple problems)  :: 124 of 384
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7145232
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="AK83"
                     /isolation_source="bacterial cell culture"
                     /db_xref="taxon:382"
WGS         JBXEOW010000001-JBXEOW010000005
WGS_SCAFLD  NZ_CM166501
WGS_SCAFLD  NZ_JBXEOW010000001-NZ_JBXEOW010000002
WGS_SCAFLD  NZ_JBXEOW010000004-NZ_JBXEOW010000005
//
LOCUS       NZ_JBSXNU010000000   2946833 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Qipengyuania sp. B-5, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXNU000000000
VERSION     NZ_JBSXNU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312066
            Assembly: GCF_056857815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Qipengyuania sp. B-5
  ORGANISM  Qipengyuania sp. B-5
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Qipengyuania.
REFERENCE   1  (bases 1 to 2946833)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXNU000000000.1.
            The Qipengyuania sp. B-5 whole genome shotgun (WGS) project has the
            project accession NZ_JBSXNU000000000.  This version of the project
            (01) has the accession number NZ_JBSXNU010000000, and consists of
            sequences JBSXNU010000001-JBSXNU010000054.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 368.97x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857815.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:05:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,963
            CDSs (total)                      :: 2,912
            Genes (coding)                    :: 2,874
            CDSs (with protein)               :: 2,874
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 38
            CDSs (without protein)            :: 38
            Pseudo Genes (ambiguous residues) :: 0 of 38
            Pseudo Genes (frameshifted)       :: 9 of 38
            Pseudo Genes (incomplete)         :: 32 of 38
            Pseudo Genes (internal stop)      :: 3 of 38
            Pseudo Genes (multiple problems)  :: 4 of 38
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2946833
                     /organism="Qipengyuania sp. B-5"
                     /mol_type="genomic DNA"
                     /strain="B-5"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472685"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.71773 N 63.86117 E"
                     /collection_date="2022-06"
WGS         JBSXNU010000001-JBSXNU010000054
WGS_SCAFLD  NZ_JBSXNU010000001-NZ_JBSXNU010000054
//
LOCUS       NZ_JBXGKD010000000   8272254 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Phormidium nigroviride strain Malviya-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGKD000000000
VERSION     NZ_JBXGKD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54586941
            Assembly: GCF_056858455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Phormidium nigroviride
  ORGANISM  Phormidium nigroviride
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Oscillatoriophycideae; Oscillatoriales; Oscillatoriaceae;
            Phormidium.
REFERENCE   1  (bases 1 to 8272254)
  AUTHORS   Tiwari,S., Maurya,P.K. and Singh,S.P.
  TITLE     Photoecophysiology of Oscillatoria sp. Malviya-1 under different
            light conditions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8272254)
  AUTHORS   Tiwari,S., Maurya,P.K. and Singh,S.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JAN-2026) Botany, Banaras Hindu University,
            Department of Botany, Banaras Hindu University, Varanasi, Uttar
            Pradesh 221005, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGKD000000000.1.
            The Phormidium nigroviride whole genome shotgun (WGS) project has
            the project accession NZ_JBXGKD000000000.  This version of the
            project (01) has the accession number NZ_JBXGKD010000000, and
            consists of sequences JBXGKD010000001-JBXGKD010000006.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Dr. Shailendra Pratap Singh,
            Department of Botany, Institute of Science, Banaras Hindu
            University, Varanasi,221005, Uttar Pradesh, India.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2025
            Assembly Method        :: Unicycler v. 0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1250.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858455.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:26:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,075
            CDSs (total)                      :: 6,990
            Genes (coding)                    :: 6,805
            CDSs (with protein)               :: 6,805
            Genes (RNA)                       :: 85
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 185
            CDSs (without protein)            :: 185
            Pseudo Genes (ambiguous residues) :: 0 of 185
            Pseudo Genes (frameshifted)       :: 98 of 185
            Pseudo Genes (incomplete)         :: 96 of 185
            Pseudo Genes (internal stop)      :: 36 of 185
            Pseudo Genes (multiple problems)  :: 43 of 185
            CRISPR Arrays                     :: 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8272254
                     /organism="Phormidium nigroviride"
                     /mol_type="genomic DNA"
                     /strain="Malviya-1"
                     /isolation_source="soil crust"
                     /db_xref="taxon:482564"
                     /geo_loc_name="India: Banaras Hindu University, Varanasi,
                     Uttar Pradesh"
                     /lat_lon="25.16036 N 82.59208 E"
                     /collection_date="2019-02"
WGS         JBXGKD010000001-JBXGKD010000006
WGS_SCAFLD  NZ_JBXGKD010000001-NZ_JBXGKD010000006
//
LOCUS       NZ_JBXEPK010000000   2576239 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pasteurella multocida strain 19BRD-011, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXEPK000000000
VERSION     NZ_JBXEPK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53097268
            Assembly: GCF_056858075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pasteurella multocida
  ORGANISM  Pasteurella multocida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Pasteurella.
REFERENCE   1  (bases 1 to 2576239)
  AUTHORS   Lee,G.X.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2025) School of Biological Science, The
            University of Adelaide, Adelaide, Adelaide SA 5005, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEPK000000000.1.
            The Pasteurella multocida whole genome shotgun (WGS) project has
            the project accession NZ_JBXEPK000000000.  This version of the
            project (01) has the accession number NZ_JBXEPK010000000, and
            consists of sequence JBXEPK010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 26-JUN-2025
            Assembly Method        :: Flye v. 2.9.6
            Assembly Name          :: 19BRD-011
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 238x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858075.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:04:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,598
            CDSs (total)                      :: 2,515
            Genes (coding)                    :: 2,499
            CDSs (with protein)               :: 2,499
            Genes (RNA)                       :: 83
            rRNAs                             :: 7, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 2 of 16
            Pseudo Genes (incomplete)         :: 8 of 16
            Pseudo Genes (internal stop)      :: 7 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2576239
                     /organism="Pasteurella multocida"
                     /mol_type="genomic DNA"
                     /strain="19BRD-011"
                     /isolation_source="lung"
                     /host="cattle"
                     /db_xref="taxon:747"
                     /geo_loc_name="Australia: New South Wales"
                     /collection_date="2019"
                     /collected_by="ACARE"
WGS         JBXEPK010000001
WGS_SCAFLD  NZ_CM166485
//
LOCUS       NZ_JBXEQV010000000   6185137 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas simiae strain WCS417r, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXEQV000000000
VERSION     NZ_JBXEQV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56360656
            Assembly: GCF_056858215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas simiae
  ORGANISM  Pseudomonas simiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6185137)
  AUTHORS   Cairns,E.C.O.P. and Zytynska,S.E.
  TITLE     Revealing Functional Traits of Insect Pest Suppressive
            Rhizobacterial Strains through Comparative Genomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6185137)
  AUTHORS   Cairns,E.C.O.P. and Zytynska,S.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAR-2026) Department of Evolution, Ecology and
            Behaviour, University of Liverpool, Crown Street, Liverpool L69
            7ZX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEQV000000000.1.
            The Pseudomonas simiae whole genome shotgun (WGS) project has the
            project accession NZ_JBXEQV000000000.  This version of the project
            (01) has the accession number NZ_JBXEQV010000000, and consists of
            sequence JBXEQV010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Hybrid Oxford Nanopore GridION and
                                      Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858215.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:48:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,739
            CDSs (total)                      :: 5,648
            Genes (coding)                    :: 5,555
            CDSs (with protein)               :: 5,555
            Genes (RNA)                       :: 91
            rRNAs                             :: 7, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 93
            CDSs (without protein)            :: 93
            Pseudo Genes (ambiguous residues) :: 0 of 93
            Pseudo Genes (frameshifted)       :: 24 of 93
            Pseudo Genes (incomplete)         :: 81 of 93
            Pseudo Genes (internal stop)      :: 12 of 93
            Pseudo Genes (multiple problems)  :: 20 of 93
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6185137
                     /organism="Pseudomonas simiae"
                     /mol_type="genomic DNA"
                     /strain="WCS417r"
                     /isolation_source="ENVO:00002259"
                     /host="Triticum aestivum"
                     /db_xref="taxon:321846"
                     /geo_loc_name="Netherlands: Flevopolder"
                     /lat_lon="52.50 N 5.47 E"
                     /collection_date="1988-02-24"
WGS         JBXEQV010000001
WGS_SCAFLD  NZ_CM166491
//
LOCUS       NZ_JBXGKE010000000  13034887 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pyxidicoccus sp. M15, whole genome shotgun sequencing project.
ACCESSION   NZ_JBXGKE000000000
VERSION     NZ_JBXGKE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54600921
            Assembly: GCF_056858435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pyxidicoccus sp. M15
  ORGANISM  Pyxidicoccus sp. M15
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Pyxidicoccus.
REFERENCE   1  (bases 1 to 13034887)
  AUTHORS   Hasan,M.M., Miller,S.L., Youssef,N.H. and Elshahed,M.S.
  TITLE     Isolation and characterization of Pyxidicoccus sp. Nov. M15
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 13034887)
  AUTHORS   Hasan,M.M., Miller,S.L., Youssef,N.H. and Elshahed,M.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-JAN-2026) Microbiology and Molecular Genetics,
            Oklahoma State University, Monroe, Stillwater, OK 74075, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGKE000000000.1.
            The Pyxidicoccus sp. M15 whole genome shotgun (WGS) project has the
            project accession NZ_JBXGKE000000000.  This version of the project
            (01) has the accession number NZ_JBXGKE010000000, and consists of
            sequence JBXGKE010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 96.0x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858435.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:29:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 9,775
            CDSs (total)                      :: 9,683
            Genes (coding)                    :: 9,613
            CDSs (with protein)               :: 9,613
            Genes (RNA)                       :: 92
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 17 of 70
            Pseudo Genes (incomplete)         :: 62 of 70
            Pseudo Genes (internal stop)      :: 1 of 70
            Pseudo Genes (multiple problems)  :: 10 of 70
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13034887
                     /organism="Pyxidicoccus sp. M15"
                     /mol_type="genomic DNA"
                     /strain="M15"
                     /host="Soil"
                     /db_xref="taxon:3591696"
                     /geo_loc_name="USA: Stllwater, Oklahoma"
                     /collection_date="2024-12-03"
WGS         JBXGKE010000001
WGS_SCAFLD  NZ_CM166495
//
LOCUS       NZ_JBXEOV010000000   3468672 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Psychrobacillus sp. Z16_25, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXEOV000000000
VERSION     NZ_JBXEOV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN57221549
            Assembly: GCF_056856695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Psychrobacillus sp. Z16_25
  ORGANISM  Psychrobacillus sp. Z16_25
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Psychrobacillus.
REFERENCE   1  (bases 1 to 3468672)
  AUTHORS   Wang,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2026) China CDC, China CDC, No. 155 Chuangbai
            Road, Changping District, Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEOV000000000.1.
            The Psychrobacillus sp. Z16_25 whole genome shotgun (WGS) project
            has the project accession NZ_JBXEOV000000000.  This version of the
            project (01) has the accession number NZ_JBXEOV010000000, and
            consists of sequences JBXEOV010000001-JBXEOV010000037.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.2.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 288.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856695.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:09:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,500
            CDSs (total)                      :: 3,437
            Genes (coding)                    :: 3,407
            CDSs (with protein)               :: 3,407
            Genes (RNA)                       :: 63
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 52
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 30
            CDSs (without protein)            :: 30
            Pseudo Genes (ambiguous residues) :: 0 of 30
            Pseudo Genes (frameshifted)       :: 9 of 30
            Pseudo Genes (incomplete)         :: 20 of 30
            Pseudo Genes (internal stop)      :: 7 of 30
            Pseudo Genes (multiple problems)  :: 6 of 30
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3468672
                     /organism="Psychrobacillus sp. Z16_25"
                     /mol_type="genomic DNA"
                     /strain="Z16_25"
                     /isolation_source="feces"
                     /host="Tibetan antelope"
                     /db_xref="taxon:3700061"
                     /geo_loc_name="China: Naqu prefecture, Xizang Province"
                     /collection_date="2025-09"
WGS         JBXEOV010000001-JBXEOV010000037
WGS_SCAFLD  NZ_JBXEOV010000001-NZ_JBXEOV010000037
//
LOCUS       NZ_JBXEPD010000000   7122103 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas aeruginosa strain SRMPA2956, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXEPD000000000
VERSION     NZ_JBXEPD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54807460
            Assembly: GCF_056858495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7122103)
  AUTHORS   Li,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Laboratory Center, Zhejiang Provincial
            Peoples Hospital, Shangtang Road, Hangzhou, Zhejiang province
            310006, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEPD000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBXEPD000000000.  This version of the
            project (01) has the accession number NZ_JBXEPD010000000, and
            consists of sequence JBXEPD010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858495.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:57:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,736
            CDSs (total)                      :: 6,653
            Genes (coding)                    :: 6,575
            CDSs (with protein)               :: 6,575
            Genes (RNA)                       :: 83
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 24 of 78
            Pseudo Genes (incomplete)         :: 55 of 78
            Pseudo Genes (internal stop)      :: 7 of 78
            Pseudo Genes (multiple problems)  :: 7 of 78
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7122103
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="SRMPA2956"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="China: Hangzhou"
                     /collection_date="2023"
                     /collected_by="Xi Li"
WGS         JBXEPD010000001
WGS_SCAFLD  NZ_CM166496
//
LOCUS       NZ_JBXEPF010000000   6903817 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pseudomonas aeruginosa strain SRMPA6505, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXEPF000000000
VERSION     NZ_JBXEPF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54807458
            Assembly: GCF_056858575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6903817)
  AUTHORS   Li,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Laboratory Center, Zhejiang Provincial
            Peoples Hospital, Shangtang Road, Hangzhou, Zhejiang province
            310006, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEPF000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBXEPF000000000.  This version of the
            project (01) has the accession number NZ_JBXEPF010000000, and
            consists of sequence JBXEPF010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858575.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:55:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,451
            CDSs (total)                      :: 6,370
            Genes (coding)                    :: 6,305
            CDSs (with protein)               :: 6,305
            Genes (RNA)                       :: 81
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 22 of 65
            Pseudo Genes (incomplete)         :: 46 of 65
            Pseudo Genes (internal stop)      :: 4 of 65
            Pseudo Genes (multiple problems)  :: 6 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6903817
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="SRMPA6505"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="China: Hangzhou"
                     /collection_date="2022"
                     /collected_by="Xi Li"
WGS         JBXEPF010000001
WGS_SCAFLD  NZ_CM166499
//
LOCUS       NZ_JAKKDI010000000   5111625 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Typhimurium strain
            S34L3, whole genome shotgun sequencing project.
ACCESSION   NZ_JAKKDI000000000
VERSION     NZ_JAKKDI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN25211062
            Assembly: GCF_056859215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Typhimurium (Salmonella
            typhimurium)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhimurium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5111625)
  AUTHORS   Liu,B.-T.
  TITLE     High prevalence of mcr-1-positive Salmonella Typhimurium from raw
            shell eggs in China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5111625)
  AUTHORS   Liu,B.-T.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JAN-2022) College of Veterinary Medicine, Qingdao
            Agricultural Universtiy, Changcheng, Qingdao 266109, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKKDI000000000.1.
            The Salmonella enterica subsp. enterica serovar Typhimurium whole
            genome shotgun (WGS) project has the project accession
            NZ_JAKKDI000000000.  This version of the project (01) has the
            accession number NZ_JAKKDI010000000, and consists of sequences
            JAKKDI010000001-JAKKDI010000055.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859215.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:36:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,099
            CDSs (total)                      :: 4,987
            Genes (coding)                    :: 4,839
            CDSs (with protein)               :: 4,839
            Genes (RNA)                       :: 112
            rRNAs                             :: 8, 5, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 1, 5, 7 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 148
            CDSs (without protein)            :: 148
            Pseudo Genes (ambiguous residues) :: 0 of 148
            Pseudo Genes (frameshifted)       :: 38 of 148
            Pseudo Genes (incomplete)         :: 123 of 148
            Pseudo Genes (internal stop)      :: 16 of 148
            Pseudo Genes (multiple problems)  :: 27 of 148
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5111625
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhimurium"
                     /mol_type="genomic DNA"
                     /strain="S34L3"
                     /serovar="Typhimurium"
                     /isolation_source="egg"
                     /sub_species="enterica"
                     /db_xref="taxon:90371"
                     /geo_loc_name="China: Qingdao"
                     /lat_lon="37.09 N 121.00 E"
                     /collection_date="2021-04-20"
                     /collected_by="Bao-Tao Liu"
WGS         JAKKDI010000001-JAKKDI010000055
WGS_SCAFLD  NZ_JAKKDI010000001-NZ_JAKKDI010000055
//
LOCUS       NZ_JBSXXG010000000   2434854 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pasteurella multocida strain PM2801, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSXXG000000000
VERSION     NZ_JBSXXG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53889762
            Assembly: GCF_056862705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pasteurella multocida
  ORGANISM  Pasteurella multocida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Pasteurella.
REFERENCE   1  (bases 1 to 2434854)
  AUTHORS   Murigneux,V., Zaugg,J. and Omaleki,L.
  TITLE     Exploration of Pasteurella multocida public data reveals extensive
            lipopolysaccharide outer core biosynthesis loci subtype variants
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2434854)
  AUTHORS   Omaleki,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-DEC-2025) Queensland Alliance for Agriculture and
            Food Innovations, The University of Queensland, The University of
            Queensland, St Lucia, QLD 4067, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXXG000000000.1.
            The Pasteurella multocida whole genome shotgun (WGS) project has
            the project accession NZ_JBSXXG000000000.  This version of the
            project (01) has the accession number NZ_JBSXXG010000000, and
            consists of sequences JBSXXG010000001-JBSXXG010000069.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056862705.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:48:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,417
            CDSs (total)                      :: 2,352
            Genes (coding)                    :: 2,331
            CDSs (with protein)               :: 2,331
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 2 of 21
            Pseudo Genes (incomplete)         :: 14 of 21
            Pseudo Genes (internal stop)      :: 6 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2434854
                     /organism="Pasteurella multocida"
                     /mol_type="genomic DNA"
                     /strain="PM2801"
                     /isolation_source="nasal cavity"
                     /host="bovine"
                     /db_xref="taxon:747"
                     /geo_loc_name="Australia"
                     /collection_date="2022"
                     /collected_by="Lida Omaleki"
WGS         JBSXXG010000001-JBSXXG010000069
WGS_SCAFLD  NZ_JBSXXG010000001-NZ_JBSXXG010000069
//
LOCUS       NZ_LCVC01000000      2015274 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptococcus agalactiae strain ES-PW-068, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LCVC00000000
VERSION     NZ_LCVC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03435043
            Assembly: GCF_001016725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus agalactiae
  ORGANISM  Streptococcus agalactiae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2015274)
  AUTHORS   Rosini,R., Campisi,E., De Chiara,M., Tettelin,H., Rinaudo,D.,
            Toniolo,C., Metruccio,M., Guidotti,S., Sorensen,U.B., Kilian,M.,
            Ramirez,M., Janulczyk,R., Donati,C., Grandi,G. and Margarit,I.
  CONSRTM   DEVANI Consortium
  TITLE     Genomic analysis reveals the molecular basis for capsule loss in
            the group B Streptococcus population
  JOURNAL   PLoS One 10 (5), e0125985 (2015)
   PUBMED   25946017
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2015274)
  AUTHORS   Rosini,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAY-2015) Research Center, Novartis Vaccines, Via
            Fiorentina 1, Siena 53100, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LCVC00000000.1.
            The Streptococcus agalactiae whole genome shotgun (WGS) project has
            the project accession NZ_LCVC00000000.  This version of the project
            (01) has the accession number NZ_LCVC01000000, and consists of
            sequences LCVC01000001-LCVC01000017.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Celera Assembler v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001016725.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 09:55:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,051
            CDSs (total)                      :: 1,994
            Genes (coding)                    :: 1,927
            CDSs (with protein)               :: 1,927
            Genes (RNA)                       :: 57
            rRNAs                             :: 2, 6 (5S, 16S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 6 (16S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 33 of 67
            Pseudo Genes (incomplete)         :: 33 of 67
            Pseudo Genes (internal stop)      :: 15 of 67
            Pseudo Genes (multiple problems)  :: 10 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2015274
                     /organism="Streptococcus agalactiae"
                     /mol_type="genomic DNA"
                     /strain="ES-PW-068"
                     /serotype="Ia"
                     /isolation_source="Vaginal-rectal"
                     /host="Homo sapiens"
                     /db_xref="taxon:1311"
                     /geo_loc_name="Spain"
                     /collection_date="2008"
                     /collected_by="DEVANI consortium"
                     /genotype="Ia"
WGS         LCVC01000001-LCVC01000017
WGS_SCAFLD  NZ_LCVC01000001-NZ_LCVC01000017
//
LOCUS       NZ_LKKW01000000      1430702 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptobacillus ratti strain OGS16, whole genome shotgun sequencing
            project.
ACCESSION   NZ_LKKW00000000
VERSION     NZ_LKKW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04099675
            Assembly: GCF_001891165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptobacillus ratti
  ORGANISM  Streptobacillus ratti
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Leptotrichiaceae; Streptobacillus.
REFERENCE   1  (bases 1 to 1430702)
  AUTHORS   Eisenberg,T., Glaeser,S.P., Ewers,C., Semmler,T., Nicklas,W.,
            Rau,J., Mauder,N., Hofmann,N., Imaoka,K., Kimura,M. and Kaempfer,P.
  TITLE     Streptobacillus notomytis sp. nov. isolated from an Australian
            spinifex hopping mouse (Notomys alexis) Thomas, 1922
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1430702)
  AUTHORS   Eisenberg,T., Glaeser,S.P., Ewers,C., Semmler,T., Nicklas,W.,
            Rau,J., Mauder,N., Hofmann,N., Imaoka,K., Kimura,M. and Kaempfer,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2015) NG 1 - Microbial Genomics, Robert Koch
            Institute, Nordufer 20, Berlin 13353, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LKKW00000000.1.
            The Streptobacillus ratti whole genome shotgun (WGS) project has
            the project accession NZ_LKKW00000000.  This version of the project
            (01) has the accession number NZ_LKKW01000000, and consists of
            sequences LKKW01000001-LKKW01000146.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2015
            Assembly Method        :: CLC NGS Cell v. 8.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001891165.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:34:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,439
            CDSs (total)                      :: 1,398
            Genes (coding)                    :: 1,368
            CDSs (with protein)               :: 1,368
            Genes (RNA)                       :: 41
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 30
            CDSs (without protein)            :: 30
            Pseudo Genes (ambiguous residues) :: 0 of 30
            Pseudo Genes (frameshifted)       :: 2 of 30
            Pseudo Genes (incomplete)         :: 27 of 30
            Pseudo Genes (internal stop)      :: 1 of 30
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1430702
                     /organism="Streptobacillus ratti"
                     /mol_type="genomic DNA"
                     /strain="OGS16"
                     /host="Rattus rattus"
                     /type_material="type strain of Streptobacillus ratti"
                     /db_xref="taxon:1720557"
                     /geo_loc_name="Japan"
WGS         LKKW01000001-LKKW01000146
WGS_SCAFLD  NZ_LKKW01000001-NZ_LKKW01000146
//
LOCUS       NZ_MSPR01000000      2340839 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptococcus azizii strain 12-5202, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MSPR00000000
VERSION     NZ_MSPR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06174760
            Assembly: GCF_001984715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus azizii
  ORGANISM  Streptococcus azizii
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2340839)
  AUTHORS   Gulvik,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-DEC-2016) Bacterial Special Pathogens Branch, Centers
            for Disease Control, 1600 Clifton Road, Atlanta, GA 30329, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MSPR00000000.1.
            The Streptococcus azizii whole genome shotgun (WGS) project has the
            project accession NZ_MSPR00000000.  This version of the project
            (01) has the accession number NZ_MSPR01000000, and consists of
            sequences MSPR01000001-MSPR01000047.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2016
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 251.4x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001984715.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:46:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,071
            CDSs (total)                      :: 2,015
            Genes (coding)                    :: 1,967
            CDSs (with protein)               :: 1,967
            Genes (RNA)                       :: 56
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 19 of 48
            Pseudo Genes (incomplete)         :: 32 of 48
            Pseudo Genes (internal stop)      :: 8 of 48
            Pseudo Genes (multiple problems)  :: 10 of 48
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2340839
                     /organism="Streptococcus azizii"
                     /mol_type="genomic DNA"
                     /strain="12-5202"
                     /isolation_source="meninges"
                     /host="Mus musculus"
                     /type_material="type strain of Streptococcus azizii"
                     /db_xref="taxon:1579424"
                     /geo_loc_name="USA: New York City"
                     /collection_date="2014"
                     /collected_by="The Forsyth Institute, Cambridge, MA"
WGS         MSPR01000001-MSPR01000047
WGS_SCAFLD  NZ_MSPR01000001-NZ_MSPR01000047
//
LOCUS       NZ_MSJM01000000      2094853 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptococcus cuniculi strain CCUG 65085, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MSJM00000000
VERSION     NZ_MSJM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06174763
            Assembly: GCF_001921845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus cuniculi
  ORGANISM  Streptococcus cuniculi
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2094853)
  AUTHORS   Gulvik,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2016) Bacterial Special Pathogens Branch, Centers
            for Disease Control, 1600 Clifton Road, Atlanta, GA 30329, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MSJM00000000.1.
            The Streptococcus cuniculi whole genome shotgun (WGS) project has
            the project accession NZ_MSJM00000000.  This version of the project
            (01) has the accession number NZ_MSJM01000000, and consists of
            sequences MSJM01000001-MSJM01000018.
            
            Genome was originally submitted with strain designation
            NED12-00049-6B. Strain designation was changed to CCUG 65085 to
            reflect origin of starting material.
            
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2016
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 336.7x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001921845.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:42:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,070
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,985
            CDSs (with protein)               :: 1,985
            Genes (RNA)                       :: 49
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 10 of 36
            Pseudo Genes (incomplete)         :: 26 of 36
            Pseudo Genes (internal stop)      :: 5 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2094853
                     /organism="Streptococcus cuniculi"
                     /mol_type="genomic DNA"
                     /strain="CCUG 65085"
                     /isolation_source="nasal"
                     /host="Oryctolagus cuniculus"
                     /culture_collection="CCUG:65085"
                     /type_material="type strain of Streptococcus cuniculi"
                     /db_xref="taxon:1432788"
                     /geo_loc_name="Spain: Madrid"
                     /collection_date="2014"
                     /collected_by="Ana I. Vela"
WGS         MSJM01000001-MSJM01000018
WGS_SCAFLD  NZ_MSJM01000001-NZ_MSJM01000018
//
LOCUS       NZ_JBSPUK010000000   4711333 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas sp. 123D5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSPUK000000000
VERSION     NZ_JBSPUK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53489996
            Assembly: GCF_056861215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas sp. 123D5
  ORGANISM  Stenotrophomonas sp. 123D5
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4711333)
  AUTHORS   Lu,C.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2025) Tobacco Agronomic Researcher Center, Yunnan
            Academy of Tobacco Agricultural Sciences, Yuantong Street No. 33,
            Kunming, Yunnan 650021, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSPUK000000000.1.
            The Stenotrophomonas sp. 123D5 whole genome shotgun (WGS) project
            has the project accession NZ_JBSPUK000000000.  This version of the
            project (01) has the accession number NZ_JBSPUK010000000, and
            consists of sequences JBSPUK010000001-JBSPUK010000032.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. v1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 468.31x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861215.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:03:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,355
            CDSs (total)                      :: 4,274
            Genes (coding)                    :: 4,246
            CDSs (with protein)               :: 4,246
            Genes (RNA)                       :: 81
            rRNAs                             :: 4, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 2, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 69
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 6 of 28
            Pseudo Genes (incomplete)         :: 23 of 28
            Pseudo Genes (internal stop)      :: 3 of 28
            Pseudo Genes (multiple problems)  :: 3 of 28
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4711333
                     /organism="Stenotrophomonas sp. 123D5"
                     /mol_type="genomic DNA"
                     /strain="123D5"
                     /isolation_source="tobacco field, soil"
                     /db_xref="taxon:3475839"
                     /geo_loc_name="China: Yunnan, Yuxi"
                     /lat_lon="24.237222 N 102.499167 E"
                     /collection_date="2019-05-25"
WGS         JBSPUK010000001-JBSPUK010000032
WGS_SCAFLD  NZ_JBSPUK010000001-NZ_JBSPUK010000032
//
LOCUS       NZ_JBXFWF010000000   4479569 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas sp. STEN063, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXFWF000000000
VERSION     NZ_JBXFWF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52030005
            Assembly: GCF_056854515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas sp. STEN063
  ORGANISM  Stenotrophomonas sp. STEN063
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4479569)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Genomic Analysis of Environmentally Sourced Stenotrophomonas
            Species from Fiji and Australia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4479569)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2026) Australian Institute for Microbiology and
            Infection, University of Technology Sydney, 15 Broadway, Sydney,
            NSW 2007, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFWF000000000.1.
            The Stenotrophomonas sp. STEN063 whole genome shotgun (WGS) project
            has the project accession NZ_JBXFWF000000000.  This version of the
            project (01) has the accession number NZ_JBXFWF010000000, and
            consists of sequences JBXFWF010000001-JBXFWF010000139.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 9.9x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854515.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:00:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,864
            CDSs (total)                      :: 3,797
            Genes (coding)                    :: 3,758
            CDSs (with protein)               :: 3,758
            Genes (RNA)                       :: 67
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 40
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 40
            Pseudo Genes (frameshifted)       :: 9 of 40
            Pseudo Genes (incomplete)         :: 33 of 40
            Pseudo Genes (internal stop)      :: 4 of 40
            Pseudo Genes (multiple problems)  :: 6 of 40
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4479569
                     /organism="Stenotrophomonas sp. STEN063"
                     /mol_type="genomic DNA"
                     /strain="STEN063"
                     /isolation_source="River"
                     /db_xref="taxon:3466904"
                     /geo_loc_name="Australia"
                     /collection_date="2019"
WGS         JBXFWF010000001-JBXFWF010000139
WGS_SCAFLD  NZ_JBXFWF010000001-NZ_JBXFWF010000139
//
LOCUS       NZ_JBSPUF010000000   4646277 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas sp. 21LCFQ19, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSPUF000000000
VERSION     NZ_JBSPUF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53489991
            Assembly: GCF_056861425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas sp. 21LCFQ19
  ORGANISM  Stenotrophomonas sp. 21LCFQ19
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4646277)
  AUTHORS   Lu,C.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2025) Tobacco Agronomic Researcher Center, Yunnan
            Academy of Tobacco Agricultural Sciences, Yuantong Street No. 33,
            Kunming, Yunnan 650021, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSPUF000000000.1.
            The Stenotrophomonas sp. 21LCFQ19 whole genome shotgun (WGS)
            project has the project accession NZ_JBSPUF000000000.  This version
            of the project (01) has the accession number NZ_JBSPUF010000000,
            and consists of sequences JBSPUF010000001-JBSPUF010000035.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. v1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 355.94x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861425.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:52:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,099
            CDSs (total)                      :: 4,029
            Genes (coding)                    :: 3,989
            CDSs (with protein)               :: 3,989
            Genes (RNA)                       :: 70
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 40
            CDSs (without protein)            :: 40
            Pseudo Genes (ambiguous residues) :: 0 of 40
            Pseudo Genes (frameshifted)       :: 4 of 40
            Pseudo Genes (incomplete)         :: 37 of 40
            Pseudo Genes (internal stop)      :: 4 of 40
            Pseudo Genes (multiple problems)  :: 4 of 40
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4646277
                     /organism="Stenotrophomonas sp. 21LCFQ19"
                     /mol_type="genomic DNA"
                     /strain="21LCFQ19"
                     /isolation_source="tobacco phyllosphere, leaf"
                     /db_xref="taxon:3475834"
                     /geo_loc_name="China: Yunnan, Lincang"
                     /lat_lon="24.355833 N 99.709722 E"
                     /collection_date="2021-08-23"
WGS         JBSPUF010000001-JBSPUF010000035
WGS_SCAFLD  NZ_JBSPUF010000001-NZ_JBSPUF010000035
//
LOCUS       NZ_JBXFWG010000000   4350702 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas sp. STEN054, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXFWG000000000
VERSION     NZ_JBXFWG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52029996
            Assembly: GCF_056854535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas sp. STEN054
  ORGANISM  Stenotrophomonas sp. STEN054
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4350702)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Genomic Analysis of Environmentally Sourced Stenotrophomonas
            Species from Fiji and Australia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4350702)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2026) Australian Institute for Microbiology and
            Infection, University of Technology Sydney, 15 Broadway, Sydney,
            NSW 2007, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFWG000000000.1.
            The Stenotrophomonas sp. STEN054 whole genome shotgun (WGS) project
            has the project accession NZ_JBXFWG000000000.  This version of the
            project (01) has the accession number NZ_JBXFWG010000000, and
            consists of sequences JBXFWG010000001-JBXFWG010000121.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 15.6x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854535.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:00:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,972
            CDSs (total)                      :: 3,897
            Genes (coding)                    :: 3,859
            CDSs (with protein)               :: 3,859
            Genes (RNA)                       :: 75
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 38
            CDSs (without protein)            :: 38
            Pseudo Genes (ambiguous residues) :: 0 of 38
            Pseudo Genes (frameshifted)       :: 14 of 38
            Pseudo Genes (incomplete)         :: 23 of 38
            Pseudo Genes (internal stop)      :: 6 of 38
            Pseudo Genes (multiple problems)  :: 5 of 38
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4350702
                     /organism="Stenotrophomonas sp. STEN054"
                     /mol_type="genomic DNA"
                     /strain="STEN054"
                     /isolation_source="Wetland"
                     /db_xref="taxon:3466902"
                     /geo_loc_name="Australia"
                     /collection_date="2019"
WGS         JBXFWG010000001-JBXFWG010000121
WGS_SCAFLD  NZ_JBXFWG010000001-NZ_JBXFWG010000121
//
LOCUS       NZ_JBSPUL010000000   4713495 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas sp. 96B8, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSPUL000000000
VERSION     NZ_JBSPUL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53489997
            Assembly: GCF_056861195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas sp. 96B8
  ORGANISM  Stenotrophomonas sp. 96B8
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4713495)
  AUTHORS   Lu,C.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2025) Tobacco Agronomic Researcher Center, Yunnan
            Academy of Tobacco Agricultural Sciences, Yuantong Street No. 33,
            Kunming, Yunnan 650021, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSPUL000000000.1.
            The Stenotrophomonas sp. 96B8 whole genome shotgun (WGS) project
            has the project accession NZ_JBSPUL000000000.  This version of the
            project (01) has the accession number NZ_JBSPUL010000000, and
            consists of sequences JBSPUL010000001-JBSPUL010000027.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. v1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 404.90x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861195.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:58:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,357
            CDSs (total)                      :: 4,276
            Genes (coding)                    :: 4,252
            CDSs (with protein)               :: 4,252
            Genes (RNA)                       :: 81
            rRNAs                             :: 4, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 2, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 6 of 24
            Pseudo Genes (incomplete)         :: 19 of 24
            Pseudo Genes (internal stop)      :: 4 of 24
            Pseudo Genes (multiple problems)  :: 4 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4713495
                     /organism="Stenotrophomonas sp. 96B8"
                     /mol_type="genomic DNA"
                     /strain="96B8"
                     /isolation_source="tobacco field, soil"
                     /db_xref="taxon:3475840"
                     /geo_loc_name="China: Yunnan, Kunming"
                     /lat_lon="25.24430448 N 102.59493738 E"
                     /collection_date="2019-05-07"
WGS         JBSPUL010000001-JBSPUL010000027
WGS_SCAFLD  NZ_JBSPUL010000001-NZ_JBSPUL010000027
//
LOCUS       NZ_JBXFWB010000000   4322063 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas rhizophila strain STEN077, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXFWB000000000
VERSION     NZ_JBXFWB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52030019
            Assembly: GCF_056854435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas rhizophila
  ORGANISM  Stenotrophomonas rhizophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4322063)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Genomic Analysis of Environmentally Sourced Stenotrophomonas
            Species from Fiji and Australia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4322063)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2026) Australian Institute for Microbiology and
            Infection, University of Technology Sydney, 15 Broadway, Sydney,
            NSW 2007, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFWB000000000.1.
            The Stenotrophomonas rhizophila whole genome shotgun (WGS) project
            has the project accession NZ_JBXFWB000000000.  This version of the
            project (01) has the accession number NZ_JBXFWB010000000, and
            consists of sequences JBXFWB010000001-JBXFWB010000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 18x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854435.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:55:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,878
            CDSs (total)                      :: 3,796
            Genes (coding)                    :: 3,770
            CDSs (with protein)               :: 3,770
            Genes (RNA)                       :: 82
            rRNAs                             :: 6, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 6, 2 (5S, 16S)
            tRNAs                             :: 68
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 6 of 26
            Pseudo Genes (incomplete)         :: 19 of 26
            Pseudo Genes (internal stop)      :: 4 of 26
            Pseudo Genes (multiple problems)  :: 3 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4322063
                     /organism="Stenotrophomonas rhizophila"
                     /mol_type="genomic DNA"
                     /strain="STEN077"
                     /isolation_source="River"
                     /db_xref="taxon:216778"
                     /geo_loc_name="Australia"
                     /collection_date="2019"
WGS         JBXFWB010000001-JBXFWB010000026
WGS_SCAFLD  NZ_JBXFWB010000001-NZ_JBXFWB010000026
//
LOCUS       NZ_JBXFWM010000000   4747346 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas sp. STEN033, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXFWM000000000
VERSION     NZ_JBXFWM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52029975
            Assembly: GCF_056856655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas sp. STEN033
  ORGANISM  Stenotrophomonas sp. STEN033
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4747346)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Genomic Analysis of Environmentally Sourced Stenotrophomonas
            Species from Fiji and Australia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4747346)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2026) Australian Institute for Microbiology and
            Infection, University of Technology Sydney, 15 Broadway, Sydney,
            NSW 2007, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFWM000000000.1.
            The Stenotrophomonas sp. STEN033 whole genome shotgun (WGS) project
            has the project accession NZ_JBXFWM000000000.  This version of the
            project (01) has the accession number NZ_JBXFWM010000000, and
            consists of sequences JBXFWM010000001-JBXFWM010000142.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 9.9x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856655.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:09:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,224
            CDSs (total)                      :: 4,156
            Genes (coding)                    :: 4,100
            CDSs (with protein)               :: 4,100
            Genes (RNA)                       :: 68
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 7 of 56
            Pseudo Genes (incomplete)         :: 49 of 56
            Pseudo Genes (internal stop)      :: 3 of 56
            Pseudo Genes (multiple problems)  :: 3 of 56
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4747346
                     /organism="Stenotrophomonas sp. STEN033"
                     /mol_type="genomic DNA"
                     /strain="STEN033"
                     /isolation_source="Influent Wastewater"
                     /db_xref="taxon:3466898"
                     /geo_loc_name="Australia"
                     /collection_date="2019"
WGS         JBXFWM010000001-JBXFWM010000142
WGS_SCAFLD  NZ_JBXFWM010000001-NZ_JBXFWM010000142
//
LOCUS       NZ_JBSPUQ010000000   3800646 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas sp. 115C5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSPUQ000000000
VERSION     NZ_JBSPUQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53490002
            Assembly: GCF_056861055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas sp. 115C5
  ORGANISM  Stenotrophomonas sp. 115C5
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 3800646)
  AUTHORS   Lu,C.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2025) Tobacco Agronomic Researcher Center, Yunnan
            Academy of Tobacco Agricultural Sciences, Yuantong Street No. 33,
            Kunming, Yunnan 650021, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSPUQ000000000.1.
            The Stenotrophomonas sp. 115C5 whole genome shotgun (WGS) project
            has the project accession NZ_JBSPUQ000000000.  This version of the
            project (01) has the accession number NZ_JBSPUQ010000000, and
            consists of sequences JBSPUQ010000001-JBSPUQ010000017.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. v1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 436.74x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861055.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:46:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,527
            CDSs (total)                      :: 3,471
            Genes (coding)                    :: 3,447
            CDSs (with protein)               :: 3,447
            Genes (RNA)                       :: 56
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 4 of 24
            Pseudo Genes (incomplete)         :: 22 of 24
            Pseudo Genes (internal stop)      :: 3 of 24
            Pseudo Genes (multiple problems)  :: 4 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3800646
                     /organism="Stenotrophomonas sp. 115C5"
                     /mol_type="genomic DNA"
                     /strain="115C5"
                     /isolation_source="tobacco field, soil"
                     /db_xref="taxon:3475845"
                     /geo_loc_name="China: Yunnan, Lincang"
                     /lat_lon="23.814057 N 99.648909 E"
                     /collection_date="2019-04-29"
WGS         JBSPUQ010000001-JBSPUQ010000017
WGS_SCAFLD  NZ_JBSPUQ010000001-NZ_JBSPUQ010000017
//
LOCUS       NZ_JBSPUP010000000   4525690 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas sp. 85A6, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSPUP000000000
VERSION     NZ_JBSPUP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53490001
            Assembly: GCF_056861115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas sp. 85A6
  ORGANISM  Stenotrophomonas sp. 85A6
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4525690)
  AUTHORS   Lu,C.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2025) Tobacco Agronomic Researcher Center, Yunnan
            Academy of Tobacco Agricultural Sciences, Yuantong Street No. 33,
            Kunming, Yunnan 650021, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSPUP000000000.1.
            The Stenotrophomonas sp. 85A6 whole genome shotgun (WGS) project
            has the project accession NZ_JBSPUP000000000.  This version of the
            project (01) has the accession number NZ_JBSPUP010000000, and
            consists of sequences JBSPUP010000001-JBSPUP010000043.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. v1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 259.39x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861115.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:41:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,186
            CDSs (total)                      :: 4,108
            Genes (coding)                    :: 4,081
            CDSs (with protein)               :: 4,081
            Genes (RNA)                       :: 78
            rRNAs                             :: 5, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 67
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 5 of 27
            Pseudo Genes (incomplete)         :: 23 of 27
            Pseudo Genes (internal stop)      :: 3 of 27
            Pseudo Genes (multiple problems)  :: 3 of 27
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4525690
                     /organism="Stenotrophomonas sp. 85A6"
                     /mol_type="genomic DNA"
                     /strain="85A6"
                     /isolation_source="tobacco field, soil"
                     /db_xref="taxon:3475844"
                     /geo_loc_name="China: Yunnan, Honghe"
                     /lat_lon="23.3882 N 102.7321 E"
                     /collection_date="2019-03-07"
WGS         JBSPUP010000001-JBSPUP010000043
WGS_SCAFLD  NZ_JBSPUP010000001-NZ_JBSPUP010000043
//
LOCUS       NZ_JBSPUJ010000000   4713253 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas sp. 86C4, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSPUJ000000000
VERSION     NZ_JBSPUJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53489995
            Assembly: GCF_056861295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas sp. 86C4
  ORGANISM  Stenotrophomonas sp. 86C4
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4713253)
  AUTHORS   Lu,C.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2025) Tobacco Agronomic Researcher Center, Yunnan
            Academy of Tobacco Agricultural Sciences, Yuantong Street No. 33,
            Kunming, Yunnan 650021, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSPUJ000000000.1.
            The Stenotrophomonas sp. 86C4 whole genome shotgun (WGS) project
            has the project accession NZ_JBSPUJ000000000.  This version of the
            project (01) has the accession number NZ_JBSPUJ010000000, and
            consists of sequences JBSPUJ010000001-JBSPUJ010000047.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. v1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 378.91x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861295.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:54:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,360
            CDSs (total)                      :: 4,278
            Genes (coding)                    :: 4,252
            CDSs (with protein)               :: 4,252
            Genes (RNA)                       :: 82
            rRNAs                             :: 5, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 2, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 69
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 5 of 26
            Pseudo Genes (incomplete)         :: 22 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 3 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4713253
                     /organism="Stenotrophomonas sp. 86C4"
                     /mol_type="genomic DNA"
                     /strain="86C4"
                     /isolation_source="tobacco field, soil"
                     /db_xref="taxon:3475838"
                     /geo_loc_name="China: Yunnan, Kaiyuan"
                     /lat_lon="23.7167 N 103.5333 E"
                     /collection_date="2019-03-09"
WGS         JBSPUJ010000001-JBSPUJ010000047
WGS_SCAFLD  NZ_JBSPUJ010000001-NZ_JBSPUJ010000047
//
LOCUS       NZ_JBSPUI010000000   4641112 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas sp. 113D6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSPUI000000000
VERSION     NZ_JBSPUI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53489994
            Assembly: GCF_056861275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas sp. 113D6
  ORGANISM  Stenotrophomonas sp. 113D6
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4641112)
  AUTHORS   Lu,C.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2025) Tobacco Agronomic Researcher Center, Yunnan
            Academy of Tobacco Agricultural Sciences, Yuantong Street No. 33,
            Kunming, Yunnan 650021, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSPUI000000000.1.
            The Stenotrophomonas sp. 113D6 whole genome shotgun (WGS) project
            has the project accession NZ_JBSPUI000000000.  This version of the
            project (01) has the accession number NZ_JBSPUI010000000, and
            consists of sequences JBSPUI010000001-JBSPUI010000035.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. v1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 467.78x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861275.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:54:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,269
            CDSs (total)                      :: 4,187
            Genes (coding)                    :: 4,157
            CDSs (with protein)               :: 4,157
            Genes (RNA)                       :: 82
            rRNAs                             :: 4, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 2, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 30
            CDSs (without protein)            :: 30
            Pseudo Genes (ambiguous residues) :: 0 of 30
            Pseudo Genes (frameshifted)       :: 5 of 30
            Pseudo Genes (incomplete)         :: 25 of 30
            Pseudo Genes (internal stop)      :: 4 of 30
            Pseudo Genes (multiple problems)  :: 3 of 30
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4641112
                     /organism="Stenotrophomonas sp. 113D6"
                     /mol_type="genomic DNA"
                     /strain="113D6"
                     /isolation_source="tobacco field, soil"
                     /db_xref="taxon:3475837"
                     /geo_loc_name="China: Yunnan, Lincang"
                     /lat_lon="24.110047 N 99.385694 E"
                     /collection_date="2019-04-29"
WGS         JBSPUI010000001-JBSPUI010000035
WGS_SCAFLD  NZ_JBSPUI010000001-NZ_JBSPUI010000035
//
LOCUS       NZ_JBSPUD010000000   4790117 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas sp. 82F1, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSPUD000000000
VERSION     NZ_JBSPUD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53489989
            Assembly: GCF_056861525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas sp. 82F1
  ORGANISM  Stenotrophomonas sp. 82F1
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4790117)
  AUTHORS   Lu,C.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2025) Tobacco Agronomic Researcher Center, Yunnan
            Academy of Tobacco Agricultural Sciences, Yuantong Street No. 33,
            Kunming, Yunnan 650021, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSPUD000000000.1.
            The Stenotrophomonas sp. 82F1 whole genome shotgun (WGS) project
            has the project accession NZ_JBSPUD000000000.  This version of the
            project (01) has the accession number NZ_JBSPUD010000000, and
            consists of sequences JBSPUD010000001-JBSPUD010000043.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. v1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 419.26x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861525.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:01:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,320
            CDSs (total)                      :: 4,237
            Genes (coding)                    :: 4,208
            CDSs (with protein)               :: 4,208
            Genes (RNA)                       :: 83
            rRNAs                             :: 4, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 2, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 6 of 29
            Pseudo Genes (incomplete)         :: 24 of 29
            Pseudo Genes (internal stop)      :: 0 of 29
            Pseudo Genes (multiple problems)  :: 1 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4790117
                     /organism="Stenotrophomonas sp. 82F1"
                     /mol_type="genomic DNA"
                     /strain="82F1"
                     /isolation_source="tobacco field, soil"
                     /db_xref="taxon:3475832"
                     /geo_loc_name="China: Yunnan,Lijiang"
                     /lat_lon="26.7477962 N 100.2723985 E"
                     /collection_date="2019-02-01"
WGS         JBSPUD010000001-JBSPUD010000043
WGS_SCAFLD  NZ_JBSPUD010000001-NZ_JBSPUD010000043
//
LOCUS       NZ_JBSPUG010000000   4519144 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas sp. 22DLJC03, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSPUG000000000
VERSION     NZ_JBSPUG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53489992
            Assembly: GCF_056861405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas sp. 22DLJC03
  ORGANISM  Stenotrophomonas sp. 22DLJC03
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4519144)
  AUTHORS   Lu,C.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2025) Tobacco Agronomic Researcher Center, Yunnan
            Academy of Tobacco Agricultural Sciences, Yuantong Street No. 33,
            Kunming, Yunnan 650021, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSPUG000000000.1.
            The Stenotrophomonas sp. 22DLJC03 whole genome shotgun (WGS)
            project has the project accession NZ_JBSPUG000000000.  This version
            of the project (01) has the accession number NZ_JBSPUG010000000,
            and consists of sequences JBSPUG010000001-JBSPUG010000015.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. v1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 286.00x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861405.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:57:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,105
            CDSs (total)                      :: 4,036
            Genes (coding)                    :: 4,018
            CDSs (with protein)               :: 4,018
            Genes (RNA)                       :: 69
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 18
            CDSs (without protein)            :: 18
            Pseudo Genes (ambiguous residues) :: 0 of 18
            Pseudo Genes (frameshifted)       :: 2 of 18
            Pseudo Genes (incomplete)         :: 14 of 18
            Pseudo Genes (internal stop)      :: 3 of 18
            Pseudo Genes (multiple problems)  :: 1 of 18
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4519144
                     /organism="Stenotrophomonas sp. 22DLJC03"
                     /mol_type="genomic DNA"
                     /strain="22DLJC03"
                     /isolation_source="tobacco phyllosphere, leaf"
                     /db_xref="taxon:3475835"
                     /geo_loc_name="China: Yunnan,Dali"
                     /lat_lon="26.470175 N 99.927823 E"
                     /collection_date="2022-08-03"
WGS         JBSPUG010000001-JBSPUG010000015
WGS_SCAFLD  NZ_JBSPUG010000001-NZ_JBSPUG010000015
//
LOCUS       NZ_JBSPUM010000000   4759560 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas sp. 124D1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSPUM000000000
VERSION     NZ_JBSPUM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53489998
            Assembly: GCF_056861175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas sp. 124D1
  ORGANISM  Stenotrophomonas sp. 124D1
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4759560)
  AUTHORS   Lu,C.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2025) Tobacco Agronomic Researcher Center, Yunnan
            Academy of Tobacco Agricultural Sciences, Yuantong Street No. 33,
            Kunming, Yunnan 650021, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSPUM000000000.1.
            The Stenotrophomonas sp. 124D1 whole genome shotgun (WGS) project
            has the project accession NZ_JBSPUM000000000.  This version of the
            project (01) has the accession number NZ_JBSPUM010000000, and
            consists of sequences JBSPUM010000001-JBSPUM010000042.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. v1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 495.69x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861175.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:58:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,407
            CDSs (total)                      :: 4,323
            Genes (coding)                    :: 4,296
            CDSs (with protein)               :: 4,296
            Genes (RNA)                       :: 84
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 71
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 5 of 27
            Pseudo Genes (incomplete)         :: 23 of 27
            Pseudo Genes (internal stop)      :: 3 of 27
            Pseudo Genes (multiple problems)  :: 3 of 27
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4759560
                     /organism="Stenotrophomonas sp. 124D1"
                     /mol_type="genomic DNA"
                     /strain="124D1"
                     /isolation_source="tobacco field, soil"
                     /db_xref="taxon:3475841"
                     /geo_loc_name="China: Yunnan, Wenshang"
                     /lat_lon="24.133889 N 104.160833 E"
                     /collection_date="2019-06-10"
WGS         JBSPUM010000001-JBSPUM010000042
WGS_SCAFLD  NZ_JBSPUM010000001-NZ_JBSPUM010000042
//
LOCUS       NZ_CBBYHE010000000   2529429 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Sphingorhabdus sp. isolate
            PELAGICS-MAG-vn-bin037496-PRSCH-SM-22sep21., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBBYHE000000000
VERSION     NZ_CBBYHE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117450637
            Assembly: GCF_965000825.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Sphingorhabdus sp. (freshwater metagenome)
  ORGANISM  Sphingorhabdus sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingorhabdaceae; Sphingorhabdus.
REFERENCE   1  (bases 1 to 2529429)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JAN-2025) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBBYHE000000000.1.
            The Sphingorhabdus sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBBYHE000000000.  This version of the project
            (01) has the accession number NZ_CBBYHE010000000, and consists of
            sequences CBBYHE010000001-CBBYHE010000037.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_965000825.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 01:11:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,456
            CDSs (total)                      :: 2,407
            Genes (coding)                    :: 2,377
            CDSs (with protein)               :: 2,377
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 30
            CDSs (without protein)            :: 30
            Pseudo Genes (ambiguous residues) :: 0 of 30
            Pseudo Genes (frameshifted)       :: 5 of 30
            Pseudo Genes (incomplete)         :: 25 of 30
            Pseudo Genes (internal stop)      :: 1 of 30
            Pseudo Genes (multiple problems)  :: 1 of 30
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2529429
                     /organism="Sphingorhabdus sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-vn-bin037496-PRSCH-SM-22sep21."
                     /isolation_source="Prosce lake"
                     /db_xref="taxon:1902408"
                     /environmental_sample
                     /geo_loc_name="Croatia"
                     /collection_date="2021-09-22"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBBYHE010000001-CBBYHE010000037
WGS_SCAFLD  NZ_CBBYHE010000001-NZ_CBBYHE010000037
//
LOCUS       NZ_JBSPUC010000000   4050509 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas sp. K-6, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSPUC000000000
VERSION     NZ_JBSPUC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53489988
            Assembly: GCF_056861555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas sp. K-6
  ORGANISM  Stenotrophomonas sp. K-6
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4050509)
  AUTHORS   Lu,C.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2025) Tobacco Agronomic Researcher Center, Yunnan
            Academy of Tobacco Agricultural Sciences, Yuantong Street No. 33,
            Kunming, Yunnan 650021, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSPUC000000000.1.
            The Stenotrophomonas sp. K-6 whole genome shotgun (WGS) project has
            the project accession NZ_JBSPUC000000000.  This version of the
            project (01) has the accession number NZ_JBSPUC010000000, and
            consists of sequences JBSPUC010000001-JBSPUC010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. v1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 469.96x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861555.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:56:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,619
            CDSs (total)                      :: 3,534
            Genes (coding)                    :: 3,516
            CDSs (with protein)               :: 3,516
            Genes (RNA)                       :: 85
            rRNAs                             :: 3, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 18
            CDSs (without protein)            :: 18
            Pseudo Genes (ambiguous residues) :: 0 of 18
            Pseudo Genes (frameshifted)       :: 5 of 18
            Pseudo Genes (incomplete)         :: 13 of 18
            Pseudo Genes (internal stop)      :: 0 of 18
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4050509
                     /organism="Stenotrophomonas sp. K-6"
                     /mol_type="genomic DNA"
                     /strain="K-6"
                     /isolation_source="tobacco field, soil"
                     /db_xref="taxon:3475831"
                     /geo_loc_name="China: Yunnan, Yuxi"
                     /lat_lon="24.237222 N 102.499167 E"
                     /collection_date="2018-10-02"
WGS         JBSPUC010000001-JBSPUC010000008
WGS_SCAFLD  NZ_JBSPUC010000001-NZ_JBSPUC010000008
//
LOCUS       NZ_CBANFC010000000   2232856 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Sphingorhabdus sp. isolate
            PELAGICS-MAG-mu-bin015088-AMADE-SM-01apr22., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBANFC000000000
VERSION     NZ_CBANFC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117451081
            Assembly: GCF_964750325.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Sphingorhabdus sp. (freshwater metagenome)
  ORGANISM  Sphingorhabdus sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingorhabdaceae; Sphingorhabdus.
REFERENCE   1  (bases 1 to 2232856)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-DEC-2024) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBANFC000000000.1.
            The Sphingorhabdus sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBANFC000000000.  This version of the project
            (01) has the accession number NZ_CBANFC010000000, and consists of
            sequences CBANFC010000001-CBANFC010000013.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964750325.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 01:11:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,150
            CDSs (total)                      :: 2,103
            Genes (coding)                    :: 2,092
            CDSs (with protein)               :: 2,092
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 8 of 11
            Pseudo Genes (internal stop)      :: 2 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2232856
                     /organism="Sphingorhabdus sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-mu-bin015088-AMADE-SM-01apr22."
                     /isolation_source="Amadorio reservoir"
                     /db_xref="taxon:1902408"
                     /environmental_sample
                     /geo_loc_name="Spain"
                     /collection_date="2022-04-01"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBANFC010000001-CBANFC010000013
WGS_SCAFLD  NZ_CBANFC010000001-NZ_CBANFC010000013
//
LOCUS       NZ_JVAJ01000000      2537942 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus capitis strain 605_SAUR, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JVAJ00000000
VERSION     NZ_JVAJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03197805
            Assembly: GCF_001065645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus capitis
  ORGANISM  Staphylococcus capitis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2537942)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2537942)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JVAJ00000000.1.
            The Staphylococcus capitis whole genome shotgun (WGS) project has
            the project accession NZ_JVAJ00000000.  This version of the project
            (01) has the accession number NZ_JVAJ01000000, and consists of
            sequences JVAJ01000001-JVAJ01000082.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            The organism was changed from 'Staphylococcus aureus' to
            'Staphylococcus capitis' in July 2016.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_001065645.1
            Current Name        :: Staphylococcus capitis
            Previous Name       :: Staphylococcus aureus
            Date Updated        :: 2016-07-12
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. PROXYTYPE genome for current name
            A1 Genome (subject) :: GCA_000183705.1
            A1 Name             :: Staphylococcus capitis
            A1 ANI              :: 96.65309%
            A1 Query Coverage   :: 89%
            A1 Subject Coverage :: 91%
            Analysis 2 (A2)     :: Query vs. PROXYTYPE genome for previous name
            A2 Genome (subject) :: GCA_001027105.1
            A2 Name             :: Staphylococcus aureus
            A2 ANI              :: 82.00854%
            A2 Query Coverage   :: 12%
            A2 Subject Coverage :: 10%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 13x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001065645.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 09:58:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,493
            CDSs (total)                      :: 2,468
            Genes (coding)                    :: 2,403
            CDSs (with protein)               :: 2,403
            Genes (RNA)                       :: 25
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 17
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 14 of 65
            Pseudo Genes (incomplete)         :: 45 of 65
            Pseudo Genes (internal stop)      :: 15 of 65
            Pseudo Genes (multiple problems)  :: 9 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2537942
                     /organism="Staphylococcus capitis"
                     /mol_type="genomic DNA"
                     /strain="605_SAUR"
                     /host="Homo sapiens"
                     /db_xref="taxon:29388"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JVAJ01000001-JVAJ01000082
WGS_SCAFLD  NZ_JVAJ01000001-NZ_JVAJ01000082
//
LOCUS       NZ_JBSPUE010000000   4585181 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas sp. 22LJNL06-5-1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSPUE000000000
VERSION     NZ_JBSPUE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53489990
            Assembly: GCF_056861455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas sp. 22LJNL06-5-1
  ORGANISM  Stenotrophomonas sp. 22LJNL06-5-1
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4585181)
  AUTHORS   Lu,C.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2025) Tobacco Agronomic Researcher Center, Yunnan
            Academy of Tobacco Agricultural Sciences, Yuantong Street No. 33,
            Kunming, Yunnan 650021, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSPUE000000000.1.
            The Stenotrophomonas sp. 22LJNL06-5-1 whole genome shotgun (WGS)
            project has the project accession NZ_JBSPUE000000000.  This version
            of the project (01) has the accession number NZ_JBSPUE010000000,
            and consists of sequences JBSPUE010000001-JBSPUE010000018.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. v1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 269.00x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861455.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:00:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,180
            CDSs (total)                      :: 4,113
            Genes (coding)                    :: 4,096
            CDSs (with protein)               :: 4,096
            Genes (RNA)                       :: 67
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 17
            CDSs (without protein)            :: 17
            Pseudo Genes (ambiguous residues) :: 0 of 17
            Pseudo Genes (frameshifted)       :: 4 of 17
            Pseudo Genes (incomplete)         :: 12 of 17
            Pseudo Genes (internal stop)      :: 3 of 17
            Pseudo Genes (multiple problems)  :: 2 of 17
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4585181
                     /organism="Stenotrophomonas sp. 22LJNL06-5-1"
                     /mol_type="genomic DNA"
                     /strain="22LJNL06-5-1"
                     /isolation_source="tobacco phyllosphere, leaf"
                     /db_xref="taxon:3475833"
                     /geo_loc_name="China: Yunnan,Lijiang"
                     /lat_lon="27.369306 N 100.881599 E"
                     /collection_date="2022-08-31"
WGS         JBSPUE010000001-JBSPUE010000018
WGS_SCAFLD  NZ_JBSPUE010000001-NZ_JBSPUE010000018
//
LOCUS       NZ_JVOX01000000      2278238 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus hominis strain 238_SHAE, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JVOX00000000
VERSION     NZ_JVOX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03197427
            Assembly: GCF_001070775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus hominis
  ORGANISM  Staphylococcus hominis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2278238)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2278238)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JVOX00000000.1.
            The Staphylococcus hominis whole genome shotgun (WGS) project has
            the project accession NZ_JVOX00000000.  This version of the project
            (01) has the accession number NZ_JVOX01000000, and consists of
            sequences JVOX01000001-JVOX01000050.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            The organism was changed from 'Staphylococcus haemolyticus' to
            'Staphylococcus hominis' in July 2016.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_001070775.1
            Current Name        :: Staphylococcus hominis
            Previous Name       :: Staphylococcus haemolyticus
            Date Updated        :: 2016-07-12
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. PROXYTYPE genome for current name
            A1 Genome (subject) :: GCA_000247085.2
            A1 Name             :: Staphylococcus hominis
            A1 ANI              :: 97.79877%
            A1 Query Coverage   :: 88%
            A1 Subject Coverage :: 90%
            Analysis 2 (A2)     :: Query vs. PROXYTYPE genome for previous name
            A2 Genome (subject) :: GCA_000764065.1
            A2 Name             :: Staphylococcus haemolyticus
            A2 ANI              :: 84.04934%
            A2 Query Coverage   :: 31%
            A2 Subject Coverage :: 29%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 26x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001070775.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 09:54:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,267
            CDSs (total)                      :: 2,241
            Genes (coding)                    :: 2,182
            CDSs (with protein)               :: 2,182
            Genes (RNA)                       :: 26
            rRNAs                             :: 4, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 4 (16S)
            tRNAs                             :: 17
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 13 of 59
            Pseudo Genes (incomplete)         :: 50 of 59
            Pseudo Genes (internal stop)      :: 11 of 59
            Pseudo Genes (multiple problems)  :: 13 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2278238
                     /organism="Staphylococcus hominis"
                     /mol_type="genomic DNA"
                     /strain="238_SHAE"
                     /host="Homo sapiens"
                     /db_xref="taxon:1290"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JVOX01000001-JVOX01000050
WGS_SCAFLD  NZ_JVOX01000001-NZ_JVOX01000050
//
LOCUS       NZ_JWBV01000000      2267850 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus hominis strain 1137_SHAE, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JWBV00000000
VERSION     NZ_JWBV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03197091
            Assembly: GCF_001068725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus hominis
  ORGANISM  Staphylococcus hominis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2267850)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2267850)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWBV00000000.1.
            The Staphylococcus hominis whole genome shotgun (WGS) project has
            the project accession NZ_JWBV00000000.  This version of the project
            (01) has the accession number NZ_JWBV01000000, and consists of
            sequences JWBV01000001-JWBV01000089.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            The organism was changed from 'Staphylococcus haemolyticus' to
            'Staphylococcus hominis' in July 2016.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_001068725.1
            Current Name        :: Staphylococcus hominis
            Previous Name       :: Staphylococcus haemolyticus
            Date Updated        :: 2016-07-12
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. PROXYTYPE genome for current name
            A1 Genome (subject) :: GCA_000247085.2
            A1 Name             :: Staphylococcus hominis
            A1 ANI              :: 99.30698%
            A1 Query Coverage   :: 90%
            A1 Subject Coverage :: 92%
            Analysis 2 (A2)     :: Query vs. PROXYTYPE genome for previous name
            A2 Genome (subject) :: GCA_000261465.1
            A2 Name             :: Staphylococcus haemolyticus
            A2 ANI              :: 83.40623%
            A2 Query Coverage   :: 30%
            A2 Subject Coverage :: 29%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 40x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001068725.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:01:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,301
            CDSs (total)                      :: 2,273
            Genes (coding)                    :: 2,216
            CDSs (with protein)               :: 2,216
            Genes (RNA)                       :: 28
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 14 of 57
            Pseudo Genes (incomplete)         :: 43 of 57
            Pseudo Genes (internal stop)      :: 16 of 57
            Pseudo Genes (multiple problems)  :: 14 of 57
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2267850
                     /organism="Staphylococcus hominis"
                     /mol_type="genomic DNA"
                     /strain="1137_SHAE"
                     /host="Homo sapiens"
                     /db_xref="taxon:1290"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JWBV01000001-JWBV01000089
WGS_SCAFLD  NZ_JWBV01000001-NZ_JWBV01000089
//
LOCUS       NZ_JBXFWI010000000   4769567 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas rhizophila strain STEN049, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXFWI000000000
VERSION     NZ_JBXFWI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52029991
            Assembly: GCF_056856565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas rhizophila
  ORGANISM  Stenotrophomonas rhizophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4769567)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Genomic Analysis of Environmentally Sourced Stenotrophomonas
            Species from Fiji and Australia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4769567)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2026) Australian Institute for Microbiology and
            Infection, University of Technology Sydney, 15 Broadway, Sydney,
            NSW 2007, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFWI000000000.1.
            The Stenotrophomonas rhizophila whole genome shotgun (WGS) project
            has the project accession NZ_JBXFWI000000000.  This version of the
            project (01) has the accession number NZ_JBXFWI010000000, and
            consists of sequences JBXFWI010000001-JBXFWI010000149.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12.3x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856565.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:08:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,276
            CDSs (total)                      :: 4,204
            Genes (coding)                    :: 4,173
            CDSs (with protein)               :: 4,173
            Genes (RNA)                       :: 72
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 13 of 31
            Pseudo Genes (incomplete)         :: 22 of 31
            Pseudo Genes (internal stop)      :: 4 of 31
            Pseudo Genes (multiple problems)  :: 6 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4769567
                     /organism="Stenotrophomonas rhizophila"
                     /mol_type="genomic DNA"
                     /strain="STEN049"
                     /isolation_source="Wetland"
                     /db_xref="taxon:216778"
                     /geo_loc_name="Australia"
                     /collection_date="2019"
WGS         JBXFWI010000001-JBXFWI010000149
WGS_SCAFLD  NZ_JBXFWI010000001-NZ_JBXFWI010000149
//
LOCUS       NZ_MBQE01000000      5009039 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stappia indica strain SBBC 49, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MBQE00000000
VERSION     NZ_MBQE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05382876
            Assembly: GCF_001696535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stappia indica
  ORGANISM  Stappia indica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Stappia.
REFERENCE   1  (bases 1 to 5009039)
  AUTHORS   Henao,J., Ripe,L., Perez,H., Abril,D., Ospina,K., Piza,A.,
            Botero,K., Rincon,C., Donato,J., Hurtado,A., Garcia,E., Otero,V.,
            Risco,A.Del., Guerra,B., Cifuentes,Y., Ordonez,A., Rojas,D.,
            Suarez,K., Osorio,D., Diaz,E., Arevalo,C., Cadavid,L.F. and
            Pinzon,A.
  TITLE     Draft genome announcement of three uncharacterized bacteria
            associated with the Black Band Disease
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5009039)
  AUTHORS   Henao,J., Ripe,L., Perez,H., Abril,D., Ospina,K., Piza,A.,
            Botero,K., Rincon,C., Donato,J., Hurtado,A., Garcia,E., Otero,V.,
            Risco,A.Del., Guerra,B., Cifuentes,Y., Ordonez,A., Rojas,D.,
            Suarez,K., Osorio,D., Diaz,E., Arevalo,C., Cadavid,L.F. and
            Pinzon,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2016) Institute for Genetics, National University
            of Colombia, 45 Road # 26-85, Bogota 11001, Colombia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MBQE00000000.1.
            The Stappia indica whole genome shotgun (WGS) project has the
            project accession NZ_MBQE00000000.  This version of the project
            (01) has the accession number NZ_MBQE01000000, and consists of
            sequences MBQE01000001-MBQE01000017.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 48,73x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001696535.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:52:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,604
            CDSs (total)                      :: 4,551
            Genes (coding)                    :: 4,538
            CDSs (with protein)               :: 4,538
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 3 of 13
            Pseudo Genes (incomplete)         :: 11 of 13
            Pseudo Genes (internal stop)      :: 0 of 13
            Pseudo Genes (multiple problems)  :: 1 of 13
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5009039
                     /organism="Stappia indica"
                     /mol_type="genomic DNA"
                     /strain="SBBC 49"
                     /isolation_source="coral reef"
                     /db_xref="taxon:538381"
                     /geo_loc_name="Colombia: Santa Marta bay"
                     /collection_date="2012-10"
WGS         MBQE01000001-MBQE01000017
WGS_SCAFLD  NZ_MBQE01000001-NZ_MBQE01000017
//
LOCUS       NZ_JBSPUH010000000   4857841 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas sp. 305A1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSPUH000000000
VERSION     NZ_JBSPUH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53489993
            Assembly: GCF_056861325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas sp. 305A1
  ORGANISM  Stenotrophomonas sp. 305A1
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4857841)
  AUTHORS   Lu,C.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2025) Tobacco Agronomic Researcher Center, Yunnan
            Academy of Tobacco Agricultural Sciences, Yuantong Street No. 33,
            Kunming, Yunnan 650021, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSPUH000000000.1.
            The Stenotrophomonas sp. 305A1 whole genome shotgun (WGS) project
            has the project accession NZ_JBSPUH000000000.  This version of the
            project (01) has the accession number NZ_JBSPUH010000000, and
            consists of sequences JBSPUH010000001-JBSPUH010000052.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. v1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 426.99x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861325.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:56:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,450
            CDSs (total)                      :: 4,371
            Genes (coding)                    :: 4,323
            CDSs (with protein)               :: 4,323
            Genes (RNA)                       :: 79
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 11 of 48
            Pseudo Genes (incomplete)         :: 34 of 48
            Pseudo Genes (internal stop)      :: 8 of 48
            Pseudo Genes (multiple problems)  :: 4 of 48
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4857841
                     /organism="Stenotrophomonas sp. 305A1"
                     /mol_type="genomic DNA"
                     /strain="305A1"
                     /isolation_source="tobacco field, soil"
                     /db_xref="taxon:3475836"
                     /geo_loc_name="China: Yunnan, Wenshang"
                     /lat_lon="23.1205866 N 104.031296 E"
                     /collection_date="2021-03-30"
WGS         JBSPUH010000001-JBSPUH010000052
WGS_SCAFLD  NZ_JBSPUH010000001-NZ_JBSPUH010000052
//
LOCUS       NZ_JBSPUO010000000   4803175 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas sp. 86B7, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSPUO000000000
VERSION     NZ_JBSPUO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53490000
            Assembly: GCF_056861135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas sp. 86B7
  ORGANISM  Stenotrophomonas sp. 86B7
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4803175)
  AUTHORS   Lu,C.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2025) Tobacco Agronomic Researcher Center, Yunnan
            Academy of Tobacco Agricultural Sciences, Yuantong Street No. 33,
            Kunming, Yunnan 650021, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSPUO000000000.1.
            The Stenotrophomonas sp. 86B7 whole genome shotgun (WGS) project
            has the project accession NZ_JBSPUO000000000.  This version of the
            project (01) has the accession number NZ_JBSPUO010000000, and
            consists of sequences JBSPUO010000001-JBSPUO010000048.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. v1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 261.72x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861135.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:53:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,432
            CDSs (total)                      :: 4,354
            Genes (coding)                    :: 4,327
            CDSs (with protein)               :: 4,327
            Genes (RNA)                       :: 78
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 5 of 27
            Pseudo Genes (incomplete)         :: 23 of 27
            Pseudo Genes (internal stop)      :: 3 of 27
            Pseudo Genes (multiple problems)  :: 3 of 27
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4803175
                     /organism="Stenotrophomonas sp. 86B7"
                     /mol_type="genomic DNA"
                     /strain="86B7"
                     /isolation_source="tobacco field, soil"
                     /db_xref="taxon:3475843"
                     /geo_loc_name="China: Yunnan, Kaiyuan"
                     /lat_lon="23.766262 N 103.616981 E"
                     /collection_date="2019-03-09"
WGS         JBSPUO010000001-JBSPUO010000048
WGS_SCAFLD  NZ_JBSPUO010000001-NZ_JBSPUO010000048
//
LOCUS       NZ_MBQF01000000      4826226 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stappia indica strain EBBD 17.2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MBQF00000000
VERSION     NZ_MBQF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05382895
            Assembly: GCF_001696545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stappia indica
  ORGANISM  Stappia indica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Stappia.
REFERENCE   1  (bases 1 to 4826226)
  AUTHORS   Henao,J., Ripe,L., Perez,H., Abril,D., Ospina,K., Piza,A.,
            Botero,K., Rincon,C., Donato,J., Hurtado,A., Garcia,E., Otero,V.,
            Risco,A.Del., Guerra,B., Cifuentes,Y., Ordonez,A., Rojas,D.,
            Suarez,K., Osorio,D., Diaz,E., Arevalo,C., Cadavid,L.F. and
            Pinzon,A.
  TITLE     Draft genome announcement of three uncharacterized bacteria
            associated with the Black Band Disease
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4826226)
  AUTHORS   Henao,J., Ripe,L., Perez,H., Abril,D., Ospina,K., Piza,A.,
            Botero,K., Rincon,C., Donato,J., Hurtado,A., Garcia,E., Otero,V.,
            Risco,A.Del., Guerra,B., Cifuentes,Y., Ordonez,A., Rojas,D.,
            Suarez,K., Osorio,D., Diaz,E., Arevalo,C., Cadavid,L.F. and
            Pinzon,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2016) Institute for Genetics, National University
            of Colombia, 45 Road # 26-85, Bogota 11001, Colombia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MBQF00000000.1.
            The Stappia indica whole genome shotgun (WGS) project has the
            project accession NZ_MBQF00000000.  This version of the project
            (01) has the accession number NZ_MBQF01000000, and consists of
            sequences MBQF01000001-MBQF01000045.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 36.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001696545.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:55:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,413
            CDSs (total)                      :: 4,359
            Genes (coding)                    :: 4,335
            CDSs (with protein)               :: 4,335
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 9 of 24
            Pseudo Genes (incomplete)         :: 19 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            Pseudo Genes (multiple problems)  :: 5 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4826226
                     /organism="Stappia indica"
                     /mol_type="genomic DNA"
                     /strain="EBBD 17.2"
                     /isolation_source="coral reef"
                     /db_xref="taxon:538381"
                     /geo_loc_name="Colombia: Santa Marta bay"
                     /collection_date="2012-10"
WGS         MBQF01000001-MBQF01000045
WGS_SCAFLD  NZ_MBQF01000001-NZ_MBQF01000045
//
LOCUS       NZ_JBXFVU010000000   4264790 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas rhizophila strain STEN242, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXFVU000000000
VERSION     NZ_JBXFVU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52030184
            Assembly: GCF_056854275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas rhizophila
  ORGANISM  Stenotrophomonas rhizophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4264790)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Genomic Analysis of Environmentally Sourced Stenotrophomonas
            Species from Fiji and Australia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4264790)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2026) Australian Institute for Microbiology and
            Infection, University of Technology Sydney, 15 Broadway, Sydney,
            NSW 2007, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFVU000000000.1.
            The Stenotrophomonas rhizophila whole genome shotgun (WGS) project
            has the project accession NZ_JBXFVU000000000.  This version of the
            project (01) has the accession number NZ_JBXFVU010000000, and
            consists of sequences JBXFVU010000001-JBXFVU010000028.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 19.7x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854275.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:12:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,817
            CDSs (total)                      :: 3,745
            Genes (coding)                    :: 3,717
            CDSs (with protein)               :: 3,717
            Genes (RNA)                       :: 72
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 6 of 28
            Pseudo Genes (incomplete)         :: 22 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 4 of 28
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4264790
                     /organism="Stenotrophomonas rhizophila"
                     /mol_type="genomic DNA"
                     /strain="STEN242"
                     /isolation_source="River"
                     /db_xref="taxon:216778"
                     /geo_loc_name="Australia"
                     /collection_date="2021"
WGS         JBXFVU010000001-JBXFVU010000028
WGS_SCAFLD  NZ_JBXFVU010000001-NZ_JBXFVU010000028
//
LOCUS       NZ_PPPZ01000000      2758717 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus argenteus strain DSM 28299, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PPPZ00000000
VERSION     NZ_PPPZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06177165
            Assembly: GCF_002901785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus argenteus
  ORGANISM  Staphylococcus argenteus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2758717)
  AUTHORS   Cole,K., Golubchik,T., Russell,J., Foster,D., Llewelyn,M.,
            Wilson,D., Crook,D. and Paul,J.
  TITLE     Draft genome sequences of 64 type strains of genus Staph aureus
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2758717)
  AUTHORS   Cole,K., Golubchik,T., Russell,J., Foster,D., Llewelyn,M.,
            Wilson,D., Crook,D. and Paul,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-AUG-2017) Nuffield Department of Medicine, Oxford
            University, Headley Way, Oxford OX3 9DU, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PPPZ00000000.1.
            The Staphylococcus argenteus whole genome shotgun (WGS) project has
            the project accession NZ_PPPZ00000000.  This version of the project
            (01) has the accession number NZ_PPPZ01000000, and consists of
            sequences PPPZ01000001-PPPZ01000048.
            Bacteria available from DSMZ.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-FEB-2017
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 31.51x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002901785.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:25:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,708
            CDSs (total)                      :: 2,650
            Genes (coding)                    :: 2,555
            CDSs (with protein)               :: 2,555
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 95
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 44 of 95
            Pseudo Genes (incomplete)         :: 51 of 95
            Pseudo Genes (internal stop)      :: 21 of 95
            Pseudo Genes (multiple problems)  :: 16 of 95
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2758717
                     /organism="Staphylococcus argenteus"
                     /mol_type="genomic DNA"
                     /strain="DSM 28299"
                     /host="Homo sapiens"
                     /culture_collection="DSM:28299"
                     /type_material="type strain of Staphylococcus argenteus"
                     /db_xref="taxon:985002"
                     /geo_loc_name="Germany: Braunschweig"
                     /collection_date="2006-09-01"
                     /collected_by="ModMedMicOxford"
WGS         PPPZ01000001-PPPZ01000048
WGS_SCAFLD  NZ_PPPZ01000001-NZ_PPPZ01000048
//
LOCUS       NZ_JBXFWE010000000   4457684 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas rhizophila strain STEN064, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXFWE000000000
VERSION     NZ_JBXFWE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52030006
            Assembly: GCF_056854495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas rhizophila
  ORGANISM  Stenotrophomonas rhizophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4457684)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Genomic Analysis of Environmentally Sourced Stenotrophomonas
            Species from Fiji and Australia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4457684)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2026) Australian Institute for Microbiology and
            Infection, University of Technology Sydney, 15 Broadway, Sydney,
            NSW 2007, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFWE000000000.1.
            The Stenotrophomonas rhizophila whole genome shotgun (WGS) project
            has the project accession NZ_JBXFWE000000000.  This version of the
            project (01) has the accession number NZ_JBXFWE010000000, and
            consists of sequences JBXFWE010000001-JBXFWE010000119.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12.3x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854495.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:48:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,042
            CDSs (total)                      :: 3,972
            Genes (coding)                    :: 3,937
            CDSs (with protein)               :: 3,937
            Genes (RNA)                       :: 70
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 5 of 35
            Pseudo Genes (incomplete)         :: 33 of 35
            Pseudo Genes (internal stop)      :: 2 of 35
            Pseudo Genes (multiple problems)  :: 5 of 35
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4457684
                     /organism="Stenotrophomonas rhizophila"
                     /mol_type="genomic DNA"
                     /strain="STEN064"
                     /isolation_source="River"
                     /db_xref="taxon:216778"
                     /geo_loc_name="Australia"
                     /collection_date="2019"
WGS         JBXFWE010000001-JBXFWE010000119
WGS_SCAFLD  NZ_JBXFWE010000001-NZ_JBXFWE010000119
//
LOCUS       NZ_PZHM01000000      2541319 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus saprophyticus strain SNUC 2120, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PZHM00000000
VERSION     NZ_PZHM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06173103
            Assembly: GCF_003042225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus saprophyticus
  ORGANISM  Staphylococcus saprophyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2541319)
  AUTHORS   Naushad,S., Barkema,H.W., Luby,C., Condas,L.A., Nobrega,D.B.,
            Carson,D.A. and De Buck,J.
  TITLE     Comprehensive Phylogenetic Analysis of Bovine Non-aureus
            Staphylococci Species Based on Whole-Genome Sequencing
  JOURNAL   Front Microbiol 7, 1990 (2016)
   PUBMED   28066335
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2541319)
  AUTHORS   Naushad,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAR-2018) Production Animal Health, University of
            Calgary, 3330 Hospital Drive NW, Calgary, Alberta T2N 4N1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PZHM00000000.1.
            The Staphylococcus saprophyticus whole genome shotgun (WGS) project
            has the project accession NZ_PZHM00000000.  This version of the
            project (01) has the accession number NZ_PZHM01000000, and consists
            of sequences PZHM01000001-PZHM01000105.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 43x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003042225.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:42:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,549
            CDSs (total)                      :: 2,474
            Genes (coding)                    :: 2,385
            CDSs (with protein)               :: 2,385
            Genes (RNA)                       :: 75
            rRNAs                             :: 8, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (16S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 89
            CDSs (without protein)            :: 89
            Pseudo Genes (ambiguous residues) :: 0 of 89
            Pseudo Genes (frameshifted)       :: 31 of 89
            Pseudo Genes (incomplete)         :: 45 of 89
            Pseudo Genes (internal stop)      :: 22 of 89
            Pseudo Genes (multiple problems)  :: 9 of 89
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2541319
                     /organism="Staphylococcus saprophyticus"
                     /mol_type="genomic DNA"
                     /strain="SNUC 2120"
                     /isolation_source="Herd 318"
                     /host="Bos taurus"
                     /db_xref="taxon:29385"
                     /geo_loc_name="Canada: Quebec"
                     /collection_date="2007-07-05"
                     /collected_by="Canadian Bovine Mastitis Research Network
                     (CBMRN)"
WGS         PZHM01000001-PZHM01000105
WGS_SCAFLD  NZ_PZHM01000001-NZ_PZHM01000105
//
LOCUS       NZ_JBSPUB010000000   4730774 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas sp. 132-E2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSPUB000000000
VERSION     NZ_JBSPUB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53489987
            Assembly: GCF_056861585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas sp. 132-E2
  ORGANISM  Stenotrophomonas sp. 132-E2
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4730774)
  AUTHORS   Lu,C.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2025) Tobacco Agronomic Researcher Center, Yunnan
            Academy of Tobacco Agricultural Sciences, Yuantong Street No. 33,
            Kunming, Yunnan 650021, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSPUB000000000.1.
            The Stenotrophomonas sp. 132-E2 whole genome shotgun (WGS) project
            has the project accession NZ_JBSPUB000000000.  This version of the
            project (01) has the accession number NZ_JBSPUB010000000, and
            consists of sequences JBSPUB010000001-JBSPUB010000043.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. v1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 293.06x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861585.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:03:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,298
            Genes (coding)                    :: 4,263
            CDSs (with protein)               :: 4,263
            Genes (RNA)                       :: 82
            rRNAs                             :: 4, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 2 (5S, 16S)
            partial rRNAs                     :: 1, 3 (5S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 5 of 35
            Pseudo Genes (incomplete)         :: 31 of 35
            Pseudo Genes (internal stop)      :: 3 of 35
            Pseudo Genes (multiple problems)  :: 3 of 35
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4730774
                     /organism="Stenotrophomonas sp. 132-E2"
                     /mol_type="genomic DNA"
                     /strain="132-E2"
                     /isolation_source="tobacco field, soil"
                     /db_xref="taxon:3475830"
                     /geo_loc_name="China: Yunnan, Yuxi"
                     /lat_lon="24.237222 N 102.499167 E"
                     /collection_date="2019-07-17"
WGS         JBSPUB010000001-JBSPUB010000043
WGS_SCAFLD  NZ_JBSPUB010000001-NZ_JBSPUB010000043
//
LOCUS       NZ_JBSPUN010000000   4731413 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas sp. 137-E6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSPUN000000000
VERSION     NZ_JBSPUN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53489999
            Assembly: GCF_056861155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas sp. 137-E6
  ORGANISM  Stenotrophomonas sp. 137-E6
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4731413)
  AUTHORS   Lu,C.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2025) Tobacco Agronomic Researcher Center, Yunnan
            Academy of Tobacco Agricultural Sciences, Yuantong Street No. 33,
            Kunming, Yunnan 650021, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSPUN000000000.1.
            The Stenotrophomonas sp. 137-E6 whole genome shotgun (WGS) project
            has the project accession NZ_JBSPUN000000000.  This version of the
            project (01) has the accession number NZ_JBSPUN010000000, and
            consists of sequences JBSPUN010000001-JBSPUN010000031.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. v1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 524.60x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056861155.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:57:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,353
            CDSs (total)                      :: 4,276
            Genes (coding)                    :: 4,249
            CDSs (with protein)               :: 4,249
            Genes (RNA)                       :: 77
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 5 of 27
            Pseudo Genes (incomplete)         :: 23 of 27
            Pseudo Genes (internal stop)      :: 3 of 27
            Pseudo Genes (multiple problems)  :: 3 of 27
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4731413
                     /organism="Stenotrophomonas sp. 137-E6"
                     /mol_type="genomic DNA"
                     /strain="137-E6"
                     /isolation_source="tobacco field, soil"
                     /db_xref="taxon:3475842"
                     /geo_loc_name="China: Yunnan, Wenshang"
                     /lat_lon="23.939655 N 104.30471 E"
                     /collection_date="2019-07-26"
WGS         JBSPUN010000001-JBSPUN010000031
WGS_SCAFLD  NZ_JBSPUN010000001-NZ_JBSPUN010000031
//
LOCUS       NZ_QAYE01000000      4383461 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Sphingomonas faeni strain MA-olki, whole genome shotgun sequencing
            project.
ACCESSION   NZ_QAYE00000000
VERSION     NZ_QAYE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08778976
            Assembly: GCF_003053745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sphingomonas faeni
  ORGANISM  Sphingomonas faeni
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (bases 1 to 4383461)
  AUTHORS   Whitman,W.
  TITLE     Genomic Encyclopedia of Type Strains, Phase III (KMG-III): the
            genomes of soil and plant-associated and newly described type
            strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4383461)
  AUTHORS   Whitman,W., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-APR-2018) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QAYE00000000.1.
            The Sphingomonas faeni whole genome shotgun (WGS) project has the
            project accession NZ_QAYE00000000.  This version of the project
            (01) has the accession number NZ_QAYE01000000, and consists of
            sequences QAYE01000001-QAYE01000033.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10.1
            Expected Final Version :: No
            Genome Coverage        :: 200.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003053745.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:46:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,088
            CDSs (total)                      :: 4,029
            Genes (coding)                    :: 4,003
            CDSs (with protein)               :: 4,003
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 4 of 27
            Pseudo Genes (incomplete)         :: 24 of 27
            Pseudo Genes (internal stop)      :: 2 of 27
            Pseudo Genes (multiple problems)  :: 4 of 27
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4383461
                     /organism="Sphingomonas faeni"
                     /mol_type="genomic DNA"
                     /strain="MA-olki"
                     /type_material="type strain of Sphingomonas faeni"
                     /db_xref="taxon:185950"
                     /geo_loc_name="Finland"
WGS         QAYE01000001-QAYE01000033
WGS_SCAFLD  NZ_QAYE01000001-NZ_QAYE01000033
//
LOCUS       NZ_PZEL01000000      2826888 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus xylosus strain SNUC 3232, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PZEL00000000
VERSION     NZ_PZEL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06173238
            Assembly: GCF_003041275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus xylosus
  ORGANISM  Staphylococcus xylosus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2826888)
  AUTHORS   Naushad,S., Barkema,H.W., Luby,C., Condas,L.A., Nobrega,D.B.,
            Carson,D.A. and De Buck,J.
  TITLE     Comprehensive Phylogenetic Analysis of Bovine Non-aureus
            Staphylococci Species Based on Whole-Genome Sequencing
  JOURNAL   Front Microbiol 7, 1990 (2016)
   PUBMED   28066335
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2826888)
  AUTHORS   Naushad,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAR-2018) Production Animal Health, University of
            Calgary, 3330 Hospital Drive NW, Calgary, Alberta T2N 4N1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PZEL00000000.1.
            The Staphylococcus xylosus whole genome shotgun (WGS) project has
            the project accession NZ_PZEL00000000.  This version of the project
            (01) has the accession number NZ_PZEL01000000, and consists of
            sequences PZEL01000001-PZEL01000151.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 39x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003041275.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:44:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,777
            CDSs (total)                      :: 2,701
            Genes (coding)                    :: 2,664
            CDSs (with protein)               :: 2,664
            Genes (RNA)                       :: 76
            rRNAs                             :: 7, 5, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (16S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 6 of 37
            Pseudo Genes (incomplete)         :: 25 of 37
            Pseudo Genes (internal stop)      :: 8 of 37
            Pseudo Genes (multiple problems)  :: 2 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2826888
                     /organism="Staphylococcus xylosus"
                     /mol_type="genomic DNA"
                     /strain="SNUC 3232"
                     /isolation_source="Herd 226"
                     /host="Bos taurus"
                     /db_xref="taxon:1288"
                     /geo_loc_name="Canada: Ontario"
                     /collection_date="2007-05-25"
                     /collected_by="Canadian Bovine Mastitis Research Network
                     (CBMRN)"
WGS         PZEL01000001-PZEL01000151
WGS_SCAFLD  NZ_PZEL01000001-NZ_PZEL01000151
//
LOCUS       NZ_QAOG01000000      4410490 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Sphingomonas aurantiaca strain MA101b, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QAOG00000000
VERSION     NZ_QAOG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08777253
            Assembly: GCF_003050705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sphingomonas aurantiaca
  ORGANISM  Sphingomonas aurantiaca
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (bases 1 to 4410490)
  AUTHORS   Whitman,W.
  TITLE     Genomic Encyclopedia of Type Strains, Phase III (KMG-III): the
            genomes of soil and plant-associated and newly described type
            strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4410490)
  AUTHORS   Whitman,W., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-APR-2018) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QAOG00000000.1.
            The Sphingomonas aurantiaca whole genome shotgun (WGS) project has
            the project accession NZ_QAOG00000000.  This version of the project
            (01) has the accession number NZ_QAOG01000000, and consists of
            sequences QAOG01000001-QAOG01000013.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10.1
            Expected Final Version :: No
            Genome Coverage        :: 199.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003050705.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:45:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,051
            CDSs (total)                      :: 3,994
            Genes (coding)                    :: 3,959
            CDSs (with protein)               :: 3,959
            Genes (RNA)                       :: 57
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 8 of 35
            Pseudo Genes (incomplete)         :: 28 of 35
            Pseudo Genes (internal stop)      :: 2 of 35
            Pseudo Genes (multiple problems)  :: 3 of 35
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4410490
                     /organism="Sphingomonas aurantiaca"
                     /mol_type="genomic DNA"
                     /strain="MA101b"
                     /type_material="type strain of Sphingomonas aurantiaca"
                     /db_xref="taxon:185949"
                     /geo_loc_name="Finland"
WGS         QAOG01000001-QAOG01000013
WGS_SCAFLD  NZ_QAOG01000001-NZ_QAOG01000013
//
LOCUS       NZ_QXQX01000000      2364145 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus chromogenes strain SNUC 1603, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QXQX00000000
VERSION     NZ_QXQX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06172922
            Assembly: GCF_003578215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus chromogenes
  ORGANISM  Staphylococcus chromogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2364145)
  AUTHORS   Naushad,S., Barkema,H.W., Luby,C., Condas,L.A., Nobrega,D.B.,
            Carson,D.A. and De Buck,J.
  TITLE     Comprehensive Phylogenetic Analysis of Bovine Non-aureus
            Staphylococci Species Based on Whole-Genome Sequencing
  JOURNAL   Front Microbiol 7, 1990 (2016)
   PUBMED   28066335
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2364145)
  AUTHORS   Naushad,S. and De Buck,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2018) Production Animal Health, University of
            Calgary, 3330 Hospital Drive NW, Calgary, Alberta T2N 4N1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QXQX00000000.1.
            The Staphylococcus chromogenes whole genome shotgun (WGS) project
            has the project accession NZ_QXQX00000000.  This version of the
            project (01) has the accession number NZ_QXQX01000000, and consists
            of sequences QXQX01000001-QXQX01000165.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 62x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003578215.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:53:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,447
            CDSs (total)                      :: 2,357
            Genes (coding)                    :: 2,255
            CDSs (with protein)               :: 2,255
            Genes (RNA)                       :: 90
            rRNAs                             :: 9, 11, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 2, 11, 7 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 102
            CDSs (without protein)            :: 102
            Pseudo Genes (ambiguous residues) :: 0 of 102
            Pseudo Genes (frameshifted)       :: 12 of 102
            Pseudo Genes (incomplete)         :: 89 of 102
            Pseudo Genes (internal stop)      :: 5 of 102
            Pseudo Genes (multiple problems)  :: 4 of 102
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2364145
                     /organism="Staphylococcus chromogenes"
                     /mol_type="genomic DNA"
                     /strain="SNUC 1603"
                     /isolation_source="Herd 201"
                     /host="Bos taurus"
                     /db_xref="taxon:46126"
                     /geo_loc_name="Canada: Ontario"
                     /collection_date="2007-08-09"
                     /collected_by="Canadian Bovine Mastitis Research Network
                     (CBMRN)"
WGS         QXQX01000001-QXQX01000165
WGS_SCAFLD  NZ_QXQX01000001-NZ_QXQX01000165
//
LOCUS       NZ_RCVN01000000      3045959 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus pseudoxylosus strain S04009, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RCVN00000000
VERSION     NZ_RCVN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10236448
            Assembly: GCF_003697915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus pseudoxylosus
  ORGANISM  Staphylococcus pseudoxylosus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3045959)
  AUTHORS   Macfadyen,A.C., Leroy,S., Harrison,E.M., Parkhill,J., Holmes,M.A.
            and Paterson,G.K.
  TITLE     Staphylococcus pseudoxylosus sp. nov., isolated from bovine
            mastitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3045959)
  AUTHORS   Macfadyen,A.C. and Paterson,G.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2018) The Royal (Dick) School of Veterinary
            Studies, University of Edinburgh, Easter Bush Campus, Midlothian
            EH25 9RG, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RCVN00000000.1.
            The Staphylococcus pseudoxylosus whole genome shotgun (WGS) project
            has the project accession NZ_RCVN00000000.  This version of the
            project (01) has the accession number NZ_RCVN01000000, and consists
            of sequences RCVN01000001-RCVN01000124.
            Bacteria and source DNA available from NCTC.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 23-MAR-2018
            Assembly Method        :: SPAdes v. March-2018
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 106.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003697915.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:02:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,050
            CDSs (total)                      :: 2,998
            Genes (coding)                    :: 2,927
            CDSs (with protein)               :: 2,927
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 20 of 71
            Pseudo Genes (incomplete)         :: 47 of 71
            Pseudo Genes (internal stop)      :: 12 of 71
            Pseudo Genes (multiple problems)  :: 8 of 71
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3045959
                     /organism="Staphylococcus pseudoxylosus"
                     /mol_type="genomic DNA"
                     /strain="S04009"
                     /isolation_source="mastitis"
                     /host="bovine"
                     /type_material="type strain of Staphylococcus
                     pseudoxylosus"
                     /db_xref="taxon:2282419"
                     /geo_loc_name="France"
                     /collection_date="2002"
WGS         RCVN01000001-RCVN01000124
WGS_SCAFLD  NZ_RCVN01000001-NZ_RCVN01000124
//
LOCUS       NZ_QHIC01000000      2803916 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus pseudintermedius strain SP130a, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QHIC00000000
VERSION     NZ_QHIC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09258691
            Assembly: GCF_004166355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
REFERENCE   1  (bases 1 to 2803916)
  AUTHORS   Nisa,S., Bercker,C., Midwinter,A.C., Bruce,I., Graham,C.F.,
            Venter,P., Bell,A., French,N.P., Benschop,J., Bailey,K.M. and
            Wilkinson,D.A.
  TITLE     Combining MALDI-TOF and genomics in the study of methicillin
            resistant and multidrug resistant Staphylococcus pseudintermedius
            in New Zealand
  JOURNAL   Sci Rep 9 (1), 1271 (2019)
   PUBMED   30718644
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2803916)
  AUTHORS   Wilkinson,D.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAY-2018) School of Veterinary Science, Massey
            University, Molecular Epidemiology and Public Health Laboratory
            (mEpiLab), Hopkirk Research Institute, Massey Un, Palmerston North,
            Manawatu 4474, New Zealand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QHIC00000000.1.
            The Staphylococcus pseudintermedius whole genome shotgun (WGS)
            project has the project accession NZ_QHIC00000000.  This version of
            the project (01) has the accession number NZ_QHIC01000000, and
            consists of sequences QHIC01000001-QHIC01000087.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 31-JAN-2018
            Assembly Method        :: SPAdes v. 3.10.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 104x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004166355.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:11:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,785
            CDSs (total)                      :: 2,704
            Genes (coding)                    :: 2,635
            CDSs (with protein)               :: 2,635
            Genes (RNA)                       :: 81
            rRNAs                             :: 7, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 16S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 16 of 69
            Pseudo Genes (incomplete)         :: 53 of 69
            Pseudo Genes (internal stop)      :: 15 of 69
            Pseudo Genes (multiple problems)  :: 14 of 69
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2803916
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /strain="SP130a"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:283734"
                     /geo_loc_name="New Zealand"
                     /collection_date="2016"
WGS         QHIC01000001-QHIC01000087
WGS_SCAFLD  NZ_QHIC01000001-NZ_QHIC01000087
//
LOCUS       NZ_RJQO01000000      2850919 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus pseudintermedius strain MAD668, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RJQO00000000
VERSION     NZ_RJQO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10389964
            Assembly: GCF_016804585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
REFERENCE   1  (bases 1 to 2850919)
  AUTHORS   Jones,L.P., Davis,M.A., Shah,D.H. and Paul,N.C.
  TITLE     Evaluation of genotyping methods for Staphylococcus
            pseudintermedius at local, regional and global scales
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2850919)
  AUTHORS   Jones,L.P., Davis,M.A., Shah,D.H. and Paul,N.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2018) Global Animal Health, Washington State
            University, 240 Ott Rd, Pullman, WA 99164, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RJQO00000000.1.
            The Staphylococcus pseudintermedius whole genome shotgun (WGS)
            project has the project accession NZ_RJQO00000000.  This version of
            the project (01) has the accession number NZ_RJQO01000000, and
            consists of sequences RJQO01000001-RJQO01000036.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: SEP-2018
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 510x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_016804585.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:27:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,821
            CDSs (total)                      :: 2,752
            Genes (coding)                    :: 2,683
            CDSs (with protein)               :: 2,683
            Genes (RNA)                       :: 69
            rRNAs                             :: 6, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 13 of 69
            Pseudo Genes (incomplete)         :: 56 of 69
            Pseudo Genes (internal stop)      :: 8 of 69
            Pseudo Genes (multiple problems)  :: 8 of 69
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2850919
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /strain="MAD668"
                     /isolation_source="skin"
                     /host="canine"
                     /db_xref="taxon:283734"
                     /geo_loc_name="USA: Colorado"
                     /collection_date="2017"
WGS         RJQO01000001-RJQO01000036
WGS_SCAFLD  NZ_RJQO01000001-NZ_RJQO01000036
//
LOCUS       NZ_CBAOAK010000000   2742647 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Sphingorhabdus sp. isolate
            PELAGICS-MAG-mu-bin022816-RIMVE-LM-08jun20., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBAOAK000000000
VERSION     NZ_CBAOAK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117452435
            Assembly: GCF_964755665.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Sphingorhabdus sp. (freshwater metagenome)
  ORGANISM  Sphingorhabdus sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingorhabdaceae; Sphingorhabdus.
REFERENCE   1  (bases 1 to 2742647)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-DEC-2024) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBAOAK000000000.1.
            The Sphingorhabdus sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBAOAK000000000.  This version of the project
            (01) has the accession number NZ_CBAOAK010000000, and consists of
            sequences CBAOAK010000001-CBAOAK010000202.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964755665.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:38:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,718
            CDSs (total)                      :: 2,678
            Genes (coding)                    :: 2,627
            CDSs (with protein)               :: 2,627
            Genes (RNA)                       :: 40
            tRNAs                             :: 36
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 6 of 51
            Pseudo Genes (incomplete)         :: 43 of 51
            Pseudo Genes (internal stop)      :: 2 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2742647
                     /organism="Sphingorhabdus sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-mu-bin022816-RIMVE-LM-08jun20."
                     /isolation_source="Rimov reservoir"
                     /db_xref="taxon:1902408"
                     /environmental_sample
                     /geo_loc_name="Czechia"
                     /collection_date="2020-06-08"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBAOAK010000001-CBAOAK010000202
WGS_SCAFLD  NZ_CBAOAK010000001-NZ_CBAOAK010000202
//
LOCUS       NZ_QVTH01000000      2474315 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus epidermidis strain s1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QVTH00000000
VERSION     NZ_QVTH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09865937
            Assembly: GCF_016809475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus epidermidis
  ORGANISM  Staphylococcus epidermidis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2474315)
  AUTHORS   Lee,M.D.
  TITLE     ISS Staphylococcus Isolate Genomes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2474315)
  AUTHORS   Lee,M.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-AUG-2018) Space Biology, NASA Ames Research Center,
            Moffett Blvd, Mountain View, CA 94035, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QVTH00000000.1.
            The Staphylococcus epidermidis whole genome shotgun (WGS) project
            has the project accession NZ_QVTH00000000.  This version of the
            project (01) has the accession number NZ_QVTH01000000, and consists
            of sequences QVTH01000001-QVTH01000027.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 382x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_016809475.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,396
            CDSs (total)                      :: 2,353
            Genes (coding)                    :: 2,288
            CDSs (with protein)               :: 2,288
            Genes (RNA)                       :: 43
            rRNAs                             :: 4, 1 (5S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 31 of 65
            Pseudo Genes (incomplete)         :: 44 of 65
            Pseudo Genes (internal stop)      :: 21 of 65
            Pseudo Genes (multiple problems)  :: 24 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2474315
                     /organism="Staphylococcus epidermidis"
                     /mol_type="genomic DNA"
                     /strain="s1"
                     /isolation_source="air"
                     /db_xref="taxon:1282"
                     /geo_loc_name="USA: International Space Station"
                     /lat_lon="29.56 N 95.10 W"
                     /collection_date="2006-08-14"
WGS         QVTH01000001-QVTH01000027
WGS_SCAFLD  NZ_QVTH01000001-NZ_QVTH01000027
//
LOCUS       NZ_JAKVEN010000000   2489639 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus haemolyticus strain H7NS2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAKVEN000000000
VERSION     NZ_JAKVEN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN26185753
            Assembly: GCF_022486105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus haemolyticus
  ORGANISM  Staphylococcus haemolyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2489639)
  AUTHORS   Yang,Y. and Tian,G.
  TITLE     Genomic diversity of Staphylococcus haemolyticus
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2489639)
  AUTHORS   Yang,Y. and Tian,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-FEB-2022) Zhongshan School of Medicine, Sun-yat Sen
            University, 74 Zhongshan 2nd Road, Guangzhou, Guangdong 510080,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKVEN000000000.1.
            The Staphylococcus haemolyticus whole genome shotgun (WGS) project
            has the project accession NZ_JAKVEN000000000.  This version of the
            project (01) has the accession number NZ_JAKVEN010000000, and
            consists of sequences JAKVEN010000001-JAKVEN010000074.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2020
            Assembly Method        :: SPAdes v. 3.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022486105.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:17:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,501
            CDSs (total)                      :: 2,452
            Genes (coding)                    :: 2,386
            CDSs (with protein)               :: 2,386
            Genes (RNA)                       :: 49
            rRNAs                             :: 3, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 1 (5S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 20 of 66
            Pseudo Genes (incomplete)         :: 33 of 66
            Pseudo Genes (internal stop)      :: 17 of 66
            Pseudo Genes (multiple problems)  :: 4 of 66
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2489639
                     /organism="Staphylococcus haemolyticus"
                     /mol_type="genomic DNA"
                     /strain="H7NS2"
                     /db_xref="taxon:1283"
                     /geo_loc_name="China"
                     /collection_date="2019"
WGS         JAKVEN010000001-JAKVEN010000074
WGS_SCAFLD  NZ_JAKVEN010000001-NZ_JAKVEN010000074
//
LOCUS       NZ_JABVXB010000000   2854241 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus argenteus strain 18A183, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABVXB000000000
VERSION     NZ_JABVXB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15184454
            Assembly: GCF_021432505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus argenteus
  ORGANISM  Staphylococcus argenteus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2854241)
  AUTHORS   Wang,W., Baker,M., Hu,Y., Xu,J., Yang,D., Maciel-Guerra,A., Xue,N.,
            Li,H., Yan,S., Li,M., Bai,Y., Dong,Y., Peng,Z., Ma,J., Li,F. and
            Dottorini,T.
  TITLE     Whole-Genome Sequencing and Machine Learning Analysis of
            Staphylococcus aureus from Multiple Heterogeneous Sources in China
            Reveals Common Genetic Traits of Antimicrobial Resistance
  JOURNAL   mSystems 6 (3), e0118520 (2021)
   PUBMED   34100643
REFERENCE   2  (bases 1 to 2854241)
  AUTHORS   Wang,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JUN-2020) Microbiology Laboratory, China National
            Center for Food Safety Risk Assessment, No. 7 Panjiayuannanli Road,
            Beijing 100021, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABVXB000000000.1.
            The Staphylococcus argenteus whole genome shotgun (WGS) project has
            the project accession NZ_JABVXB000000000.  This version of the
            project (01) has the accession number NZ_JABVXB010000000, and
            consists of sequences JABVXB010000001-JABVXB010000014.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021432505.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:18:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,805
            CDSs (total)                      :: 2,756
            Genes (coding)                    :: 2,659
            CDSs (with protein)               :: 2,659
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 97
            CDSs (without protein)            :: 97
            Pseudo Genes (ambiguous residues) :: 0 of 97
            Pseudo Genes (frameshifted)       :: 44 of 97
            Pseudo Genes (incomplete)         :: 48 of 97
            Pseudo Genes (internal stop)      :: 20 of 97
            Pseudo Genes (multiple problems)  :: 13 of 97
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2854241
                     /organism="Staphylococcus argenteus"
                     /mol_type="genomic DNA"
                     /strain="18A183"
                     /isolation_source="food"
                     /db_xref="taxon:985002"
                     /collection_date="2018"
                     /collected_by="CFSA"
WGS         JABVXB010000001-JABVXB010000014
WGS_SCAFLD  NZ_JABVXB010000001-NZ_JABVXB010000014
//
LOCUS       NZ_JAMSHT010000000   2333284 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Sphingomicrobium sediminis strain GRR-S6-50, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAMSHT000000000
VERSION     NZ_JAMSHT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN28888209
            Assembly: GCF_023805295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sphingomicrobium sediminis
  ORGANISM  Sphingomicrobium sediminis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2333284)
  AUTHORS   Kim,C.-H., Yoo,Y. and Kim,J.-J.
  TITLE     Sphingomicrobium sedimins sp. nov., a marine bacterium isolated
            from tidal flat
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2333284)
  AUTHORS   Kim,C.-H., Yoo,Y. and Kim,J.-J.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JUN-2022) College of Life Sciences & Biotechnology,
            Korea University, 145 Anam-ro, Seoul 02841, South Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAMSHT000000000.1.
            The Sphingomicrobium sediminis whole genome shotgun (WGS) project
            has the project accession NZ_JAMSHT000000000.  This version of the
            project (01) has the accession number NZ_JAMSHT010000000, and
            consists of sequences JAMSHT010000001-JAMSHT010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.10.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 310.7x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_023805295.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:43:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,393
            CDSs (total)                      :: 2,343
            Genes (coding)                    :: 2,335
            CDSs (with protein)               :: 2,335
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333284
                     /organism="Sphingomicrobium sediminis"
                     /mol_type="genomic DNA"
                     /strain="GRR-S6-50"
                     /isolation_source="tidal flat sediment"
                     /type_material="type strain of Sphingomicrobium sediminis"
                     /db_xref="taxon:2950949"
                     /geo_loc_name="South Korea: Taean-gun"
                     /collection_date="2019-06-27"
WGS         JAMSHT010000001-JAMSHT010000004
WGS_SCAFLD  NZ_JAMSHT010000001-NZ_JAMSHT010000004
//
LOCUS       NZ_JBXFWA010000000   4280995 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas rhizophila strain STEN085, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXFWA000000000
VERSION     NZ_JBXFWA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52030027
            Assembly: GCF_056854415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas rhizophila
  ORGANISM  Stenotrophomonas rhizophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4280995)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Genomic Analysis of Environmentally Sourced Stenotrophomonas
            Species from Fiji and Australia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4280995)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2026) Australian Institute for Microbiology and
            Infection, University of Technology Sydney, 15 Broadway, Sydney,
            NSW 2007, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFWA000000000.1.
            The Stenotrophomonas rhizophila whole genome shotgun (WGS) project
            has the project accession NZ_JBXFWA000000000.  This version of the
            project (01) has the accession number NZ_JBXFWA010000000, and
            consists of sequences JBXFWA010000001-JBXFWA010000063.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 13.6x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854415.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:53:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,785
            CDSs (total)                      :: 3,713
            Genes (coding)                    :: 3,692
            CDSs (with protein)               :: 3,692
            Genes (RNA)                       :: 72
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 0 of 21
            Pseudo Genes (incomplete)         :: 19 of 21
            Pseudo Genes (internal stop)      :: 2 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4280995
                     /organism="Stenotrophomonas rhizophila"
                     /mol_type="genomic DNA"
                     /strain="STEN085"
                     /isolation_source="River"
                     /db_xref="taxon:216778"
                     /geo_loc_name="Australia"
                     /collection_date="2019"
WGS         JBXFWA010000001-JBXFWA010000063
WGS_SCAFLD  NZ_JBXFWA010000001-NZ_JBXFWA010000063
//
LOCUS       NZ_JBWRIG010000000   2696010 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus aureus strain ST5 isolate SA14, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWRIG000000000
VERSION     NZ_JBWRIG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56687032
            Assembly: GCF_056864325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2696010)
  AUTHORS   Seo,K.S., Nicols,L.M., Palmer,C.D., Hellmann,K.T., Robinson,D.A.,
            Olivier,A.K., Thornton,J.A., Ferdous,K., Brookshire,C. and
            Park,J.Y.
  TITLE     Clinical severity-dependent pathogenicity and macrophage
            polarization induced by Staphylococcus aureus isolated from
            diabetic foot ulcers in a diabetic murine model
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2696010)
  AUTHORS   Seo,K.S., Nicols,L.M., Palmer,C.D., Hellmann,K.T., Robinson,D.A.,
            Olivier,A.K., Thornton,J.A., Ferdous,K., Brookshire,C. and
            Park,J.Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2026) Cell and Molecular Biology, University of
            Mississippi Medical Center, 2500 N State St, Jackson, MS 39216, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWRIG000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBWRIG000000000.  This version of the
            project (01) has the accession number NZ_JBWRIG010000000, and
            consists of sequences JBWRIG010000001-JBWRIG010000083.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 14-AUG-2025
            Assembly Method        :: Shovill v. 1.1.0; SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 440x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864325.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:33:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,689
            CDSs (total)                      :: 2,619
            Genes (coding)                    :: 2,542
            CDSs (with protein)               :: 2,542
            Genes (RNA)                       :: 70
            rRNAs                             :: 2, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 44 of 77
            Pseudo Genes (incomplete)         :: 33 of 77
            Pseudo Genes (internal stop)      :: 16 of 77
            Pseudo Genes (multiple problems)  :: 14 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2696010
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="ST5"
                     /isolate="SA14"
                     /isolation_source="Diabetic foot ulcer"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="USA: Mississippi"
                     /collection_date="2024"
WGS         JBWRIG010000001-JBWRIG010000083
WGS_SCAFLD  NZ_JBWRIG010000001-NZ_JBWRIG010000083
//
LOCUS       NZ_JBWRIH010000000   2873760 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus aureus strain ST105 isolate SA2, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBWRIH000000000
VERSION     NZ_JBWRIH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56687031
            Assembly: GCF_056864365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2873760)
  AUTHORS   Seo,K.S., Nicols,L.M., Palmer,C.D., Hellmann,K.T., Robinson,D.A.,
            Olivier,A.K., Thornton,J.A., Ferdous,K., Brookshire,C. and
            Park,J.Y.
  TITLE     Clinical severity-dependent pathogenicity and macrophage
            polarization induced by Staphylococcus aureus isolated from
            diabetic foot ulcers in a diabetic murine model
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2873760)
  AUTHORS   Seo,K.S., Nicols,L.M., Palmer,C.D., Hellmann,K.T., Robinson,D.A.,
            Olivier,A.K., Thornton,J.A., Ferdous,K., Brookshire,C. and
            Park,J.Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2026) Cell and Molecular Biology, University of
            Mississippi Medical Center, 2500 N State St, Jackson, MS 39216, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWRIH000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBWRIH000000000.  This version of the
            project (01) has the accession number NZ_JBWRIH010000000, and
            consists of sequences JBWRIH010000001-JBWRIH010000178.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 14-AUG-2025
            Assembly Method        :: Shovill v. 1.1.0; SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 478x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864365.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:24:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,953
            CDSs (total)                      :: 2,896
            Genes (coding)                    :: 2,780
            CDSs (with protein)               :: 2,780
            Genes (RNA)                       :: 57
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 3 (5S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 116
            CDSs (without protein)            :: 116
            Pseudo Genes (ambiguous residues) :: 0 of 116
            Pseudo Genes (frameshifted)       :: 51 of 116
            Pseudo Genes (incomplete)         :: 66 of 116
            Pseudo Genes (internal stop)      :: 20 of 116
            Pseudo Genes (multiple problems)  :: 19 of 116
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2873760
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="ST105"
                     /isolate="SA2"
                     /isolation_source="Diabetic foot ulcer"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="USA: Mississippi"
                     /collection_date="2024"
WGS         JBWRIH010000001-JBWRIH010000178
WGS_SCAFLD  NZ_JBWRIH010000001-NZ_JBWRIH010000178
//
LOCUS       NZ_JBWRIC010000000   2909576 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus aureus strain ST8 isolate SA23, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWRIC000000000
VERSION     NZ_JBWRIC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56687036
            Assembly: GCF_056864215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2909576)
  AUTHORS   Seo,K.S., Nicols,L.M., Palmer,C.D., Hellmann,K.T., Robinson,D.A.,
            Olivier,A.K., Thornton,J.A., Ferdous,K., Brookshire,C. and
            Park,J.Y.
  TITLE     Clinical severity-dependent pathogenicity and macrophage
            polarization induced by Staphylococcus aureus isolated from
            diabetic foot ulcers in a diabetic murine model
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2909576)
  AUTHORS   Seo,K.S., Nicols,L.M., Palmer,C.D., Hellmann,K.T., Robinson,D.A.,
            Olivier,A.K., Thornton,J.A., Ferdous,K., Brookshire,C. and
            Park,J.Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2026) Cell and Molecular Biology, University of
            Mississippi Medical Center, 2500 N State St, Jackson, MS 39216, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWRIC000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBWRIC000000000.  This version of the
            project (01) has the accession number NZ_JBWRIC010000000, and
            consists of sequences JBWRIC010000001-JBWRIC010000175.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 14-AUG-2025
            Assembly Method        :: Shovill v. 1.1.0; SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 364x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864215.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:20:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,995
            CDSs (total)                      :: 2,942
            Genes (coding)                    :: 2,837
            CDSs (with protein)               :: 2,837
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 34 of 105
            Pseudo Genes (incomplete)         :: 72 of 105
            Pseudo Genes (internal stop)      :: 13 of 105
            Pseudo Genes (multiple problems)  :: 13 of 105
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2909576
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="ST8"
                     /isolate="SA23"
                     /isolation_source="Diabetic foot ulcer"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="USA: Mississippi"
                     /collection_date="2024"
WGS         JBWRIC010000001-JBWRIC010000175
WGS_SCAFLD  NZ_JBWRIC010000001-NZ_JBWRIC010000175
//
LOCUS       NZ_JBSJDU010000000   4841899 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas maltophilia strain S4/4, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSJDU000000000
VERSION     NZ_JBSJDU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53301080
            Assembly: GCF_056857095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (bases 1 to 4841899)
  AUTHORS   Santana,M.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-NOV-2025) Microbiology, Universidade Federal de
            Vicosa, Avenida Peter Henry Rolfs, VICOSA, Minas Gerais 36570-900,
            Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSJDU000000000.1.
            The Stenotrophomonas maltophilia whole genome shotgun (WGS) project
            has the project accession NZ_JBSJDU000000000.  This version of the
            project (01) has the accession number NZ_JBSJDU010000000, and
            consists of sequences JBSJDU010000001-JBSJDU010000090.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 204x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857095.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:13:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,494
            CDSs (total)                      :: 4,414
            Genes (coding)                    :: 4,355
            CDSs (with protein)               :: 4,355
            Genes (RNA)                       :: 80
            rRNAs                             :: 2, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 14 of 59
            Pseudo Genes (incomplete)         :: 39 of 59
            Pseudo Genes (internal stop)      :: 10 of 59
            Pseudo Genes (multiple problems)  :: 4 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4841899
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /strain="S4/4"
                     /isolation_source="soil"
                     /db_xref="taxon:40324"
                     /geo_loc_name="Brazil"
                     /collection_date="2023"
WGS         JBSJDU010000001-JBSJDU010000090
WGS_SCAFLD  NZ_JBSJDU010000001-NZ_JBSJDU010000090
//
LOCUS       NZ_JBXEPY010000000   5404578 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Sphingomonas sp. BL-S-31, whole genome shotgun sequencing project.
ACCESSION   NZ_JBXEPY000000000
VERSION     NZ_JBXEPY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53082844
            Assembly: GCF_056857075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sphingomonas sp. BL-S-31
  ORGANISM  Sphingomonas sp. BL-S-31
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (bases 1 to 5404578)
  AUTHORS   Williams,N.W., Ali,T. and Boudreau,P.D.
  TITLE     Serine Palmitoyltransferase Primers Guide Isolation of
            Sphingomonadales Strains Across Diverse Environments
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5404578)
  AUTHORS   Williams,N.W., Ali,T. and Boudreau,P.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-NOV-2025) BioMolecular Sciences, Boudreau Lab, 405
            Faser Hall, University, MS 38677-1848, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEPY000000000.1.
            The Sphingomonas sp. BL-S-31 whole genome shotgun (WGS) project has
            the project accession NZ_JBXEPY000000000.  This version of the
            project (01) has the accession number NZ_JBXEPY010000000, and
            consists of sequences JBXEPY010000001-JBXEPY010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 11-SEP-2025
            Assembly Method        :: Flye v. 2.9.5-b1801
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 330x
            Sequencing Technology  :: ONT
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857075.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:51:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,043
            CDSs (total)                      :: 4,980
            Genes (coding)                    :: 4,953
            CDSs (with protein)               :: 4,953
            Genes (RNA)                       :: 63
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 9 of 27
            Pseudo Genes (incomplete)         :: 24 of 27
            Pseudo Genes (internal stop)      :: 0 of 27
            Pseudo Genes (multiple problems)  :: 6 of 27
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5404578
                     /organism="Sphingomonas sp. BL-S-31"
                     /mol_type="genomic DNA"
                     /strain="BL-S-31"
                     /isolation_source="topsoil"
                     /db_xref="taxon:3470653"
                     /geo_loc_name="USA: Mississippi, Oxford"
                     /lat_lon="34.3646 N 89.5332 W"
                     /collection_date="2025-06-06"
WGS         JBXEPY010000001-JBXEPY010000002
WGS_SCAFLD  NZ_CM166478
WGS_SCAFLD  NZ_JBXEPY010000002
//
LOCUS       NZ_JBWRIA010000000   2751488 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus aureus strain ST105 isolate SA33, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBWRIA000000000
VERSION     NZ_JBWRIA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56687038
            Assembly: GCF_056864095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2751488)
  AUTHORS   Seo,K.S., Nicols,L.M., Palmer,C.D., Hellmann,K.T., Robinson,D.A.,
            Olivier,A.K., Thornton,J.A., Ferdous,K., Brookshire,C. and
            Park,J.Y.
  TITLE     Clinical severity-dependent pathogenicity and macrophage
            polarization induced by Staphylococcus aureus isolated from
            diabetic foot ulcers in a diabetic murine model
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2751488)
  AUTHORS   Seo,K.S., Nicols,L.M., Palmer,C.D., Hellmann,K.T., Robinson,D.A.,
            Olivier,A.K., Thornton,J.A., Ferdous,K., Brookshire,C. and
            Park,J.Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2026) Cell and Molecular Biology, University of
            Mississippi Medical Center, 2500 N State St, Jackson, MS 39216, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWRIA000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBWRIA000000000.  This version of the
            project (01) has the accession number NZ_JBWRIA010000000, and
            consists of sequences JBWRIA010000001-JBWRIA010000109.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 14-AUG-2025
            Assembly Method        :: Shovill v. 1.1.0; SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 410x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864095.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:26:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,753
            CDSs (total)                      :: 2,688
            Genes (coding)                    :: 2,605
            CDSs (with protein)               :: 2,605
            Genes (RNA)                       :: 65
            rRNAs                             :: 2, 5, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 5 (5S, 16S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 83
            CDSs (without protein)            :: 83
            Pseudo Genes (ambiguous residues) :: 0 of 83
            Pseudo Genes (frameshifted)       :: 43 of 83
            Pseudo Genes (incomplete)         :: 43 of 83
            Pseudo Genes (internal stop)      :: 13 of 83
            Pseudo Genes (multiple problems)  :: 15 of 83
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2751488
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="ST105"
                     /isolate="SA33"
                     /isolation_source="Diabetic foot ulcer"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="USA: Mississippi"
                     /collection_date="2024"
WGS         JBWRIA010000001-JBWRIA010000109
WGS_SCAFLD  NZ_JBWRIA010000001-NZ_JBWRIA010000109
//
LOCUS       NZ_JBWRIF010000000   2833931 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus aureus strain ST105 isolate SA21, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBWRIF000000000
VERSION     NZ_JBWRIF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56687033
            Assembly: GCF_056864315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2833931)
  AUTHORS   Seo,K.S., Nicols,L.M., Palmer,C.D., Hellmann,K.T., Robinson,D.A.,
            Olivier,A.K., Thornton,J.A., Ferdous,K., Brookshire,C. and
            Park,J.Y.
  TITLE     Clinical severity-dependent pathogenicity and macrophage
            polarization induced by Staphylococcus aureus isolated from
            diabetic foot ulcers in a diabetic murine model
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2833931)
  AUTHORS   Seo,K.S., Nicols,L.M., Palmer,C.D., Hellmann,K.T., Robinson,D.A.,
            Olivier,A.K., Thornton,J.A., Ferdous,K., Brookshire,C. and
            Park,J.Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2026) Cell and Molecular Biology, University of
            Mississippi Medical Center, 2500 N State St, Jackson, MS 39216, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWRIF000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBWRIF000000000.  This version of the
            project (01) has the accession number NZ_JBWRIF010000000, and
            consists of sequences JBWRIF010000001-JBWRIF010000149.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 14-AUG-2025
            Assembly Method        :: Shovill v. 1.1.0; SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 387x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864315.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:28:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,876
            CDSs (total)                      :: 2,823
            Genes (coding)                    :: 2,728
            CDSs (with protein)               :: 2,728
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 2, 4 (5S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 95
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 49 of 95
            Pseudo Genes (incomplete)         :: 46 of 95
            Pseudo Genes (internal stop)      :: 20 of 95
            Pseudo Genes (multiple problems)  :: 18 of 95
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2833931
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="ST105"
                     /isolate="SA21"
                     /isolation_source="Diabetic foot ulcer"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="USA: Mississippi"
                     /collection_date="2024"
WGS         JBWRIF010000001-JBWRIF010000149
WGS_SCAFLD  NZ_JBWRIF010000001-NZ_JBWRIF010000149
//
LOCUS       NZ_JBXFVW010000000   4410384 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas hibiscicola strain STEN224, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXFVW000000000
VERSION     NZ_JBXFVW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52030166
            Assembly: GCF_056854335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas hibiscicola
  ORGANISM  Stenotrophomonas hibiscicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (bases 1 to 4410384)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Genomic Analysis of Environmentally Sourced Stenotrophomonas
            Species from Fiji and Australia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4410384)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2026) Australian Institute for Microbiology and
            Infection, University of Technology Sydney, 15 Broadway, Sydney,
            NSW 2007, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFVW000000000.1.
            The Stenotrophomonas hibiscicola whole genome shotgun (WGS) project
            has the project accession NZ_JBXFVW000000000.  This version of the
            project (01) has the accession number NZ_JBXFVW010000000, and
            consists of sequences JBXFVW010000001-JBXFVW010000110.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 13.9x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854335.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:05:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,078
            CDSs (total)                      :: 4,000
            Genes (coding)                    :: 3,965
            CDSs (with protein)               :: 3,965
            Genes (RNA)                       :: 78
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 8 of 35
            Pseudo Genes (incomplete)         :: 29 of 35
            Pseudo Genes (internal stop)      :: 3 of 35
            Pseudo Genes (multiple problems)  :: 5 of 35
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4410384
                     /organism="Stenotrophomonas hibiscicola"
                     /mol_type="genomic DNA"
                     /strain="STEN224"
                     /isolation_source="Waste Dump"
                     /db_xref="taxon:86189"
                     /geo_loc_name="Fiji"
                     /collection_date="2021"
WGS         JBXFVW010000001-JBXFVW010000110
WGS_SCAFLD  NZ_JBXFVW010000001-NZ_JBXFVW010000110
//
LOCUS       NZ_JBWRII010000000   2740499 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus aureus strain ST5 isolate SA1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWRII000000000
VERSION     NZ_JBWRII000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56687030
            Assembly: GCF_056864455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2740499)
  AUTHORS   Seo,K.S., Nicols,L.M., Palmer,C.D., Hellmann,K.T., Robinson,D.A.,
            Olivier,A.K., Thornton,J.A., Ferdous,K., Brookshire,C. and
            Park,J.Y.
  TITLE     Clinical severity-dependent pathogenicity and macrophage
            polarization induced by Staphylococcus aureus isolated from
            diabetic foot ulcers in a diabetic murine model
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2740499)
  AUTHORS   Seo,K.S., Nicols,L.M., Palmer,C.D., Hellmann,K.T., Robinson,D.A.,
            Olivier,A.K., Thornton,J.A., Ferdous,K., Brookshire,C. and
            Park,J.Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2026) Cell and Molecular Biology, University of
            Mississippi Medical Center, 2500 N State St, Jackson, MS 39216, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWRII000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBWRII000000000.  This version of the
            project (01) has the accession number NZ_JBWRII010000000, and
            consists of sequences JBWRII010000001-JBWRII010000144.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 14-AUG-2025
            Assembly Method        :: Shovill v. 1.1.0; SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 365x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864455.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:18:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,770
            CDSs (total)                      :: 2,709
            Genes (coding)                    :: 2,628
            CDSs (with protein)               :: 2,628
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 38 of 81
            Pseudo Genes (incomplete)         :: 44 of 81
            Pseudo Genes (internal stop)      :: 19 of 81
            Pseudo Genes (multiple problems)  :: 18 of 81
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740499
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="ST5"
                     /isolate="SA1"
                     /isolation_source="Diabetic foot ulcer"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="USA: Mississippi"
                     /collection_date="2024"
WGS         JBWRII010000001-JBWRII010000144
WGS_SCAFLD  NZ_JBWRII010000001-NZ_JBWRII010000144
//
LOCUS       NZ_JBWRIB010000000   2851031 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus aureus strain ST5 isolate SA27, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWRIB000000000
VERSION     NZ_JBWRIB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56687037
            Assembly: GCF_056864125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2851031)
  AUTHORS   Seo,K.S., Nicols,L.M., Palmer,C.D., Hellmann,K.T., Robinson,D.A.,
            Olivier,A.K., Thornton,J.A., Ferdous,K., Brookshire,C. and
            Park,J.Y.
  TITLE     Clinical severity-dependent pathogenicity and macrophage
            polarization induced by Staphylococcus aureus isolated from
            diabetic foot ulcers in a diabetic murine model
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2851031)
  AUTHORS   Seo,K.S., Nicols,L.M., Palmer,C.D., Hellmann,K.T., Robinson,D.A.,
            Olivier,A.K., Thornton,J.A., Ferdous,K., Brookshire,C. and
            Park,J.Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2026) Cell and Molecular Biology, University of
            Mississippi Medical Center, 2500 N State St, Jackson, MS 39216, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWRIB000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBWRIB000000000.  This version of the
            project (01) has the accession number NZ_JBWRIB010000000, and
            consists of sequences JBWRIB010000001-JBWRIB010000142.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 14-AUG-2025
            Assembly Method        :: Shovill v. 1.1.0; SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 385x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864125.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:19:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,889
            CDSs (total)                      :: 2,822
            Genes (coding)                    :: 2,723
            CDSs (with protein)               :: 2,723
            Genes (RNA)                       :: 67
            rRNAs                             :: 1, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 99
            CDSs (without protein)            :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 47 of 99
            Pseudo Genes (incomplete)         :: 52 of 99
            Pseudo Genes (internal stop)      :: 20 of 99
            Pseudo Genes (multiple problems)  :: 18 of 99
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2851031
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="ST5"
                     /isolate="SA27"
                     /isolation_source="Diabetic foot ulcer"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="USA: Mississippi"
                     /collection_date="2024"
WGS         JBWRIB010000001-JBWRIB010000142
WGS_SCAFLD  NZ_JBWRIB010000001-NZ_JBWRIB010000142
//
LOCUS       NZ_JBWRHZ010000000   2817925 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus aureus strain ST8 isolate SA75, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWRHZ000000000
VERSION     NZ_JBWRHZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56687039
            Assembly: GCF_056864065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2817925)
  AUTHORS   Seo,K.S., Nicols,L.M., Palmer,C.D., Hellmann,K.T., Robinson,D.A.,
            Olivier,A.K., Thornton,J.A., Ferdous,K., Brookshire,C. and
            Park,J.Y.
  TITLE     Clinical severity-dependent pathogenicity and macrophage
            polarization induced by Staphylococcus aureus isolated from
            diabetic foot ulcers in a diabetic murine model
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2817925)
  AUTHORS   Seo,K.S., Nicols,L.M., Palmer,C.D., Hellmann,K.T., Robinson,D.A.,
            Olivier,A.K., Thornton,J.A., Ferdous,K., Brookshire,C. and
            Park,J.Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2026) Cell and Molecular Biology, University of
            Mississippi Medical Center, 2500 N State St, Jackson, MS 39216, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWRHZ000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBWRHZ000000000.  This version of the
            project (01) has the accession number NZ_JBWRHZ010000000, and
            consists of sequences JBWRHZ010000001-JBWRHZ010000188.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 14-AUG-2025
            Assembly Method        :: Shovill v. 1.1.0; SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 414x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864065.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:21:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,866
            CDSs (total)                      :: 2,815
            Genes (coding)                    :: 2,710
            CDSs (with protein)               :: 2,710
            Genes (RNA)                       :: 51
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 33 of 105
            Pseudo Genes (incomplete)         :: 71 of 105
            Pseudo Genes (internal stop)      :: 14 of 105
            Pseudo Genes (multiple problems)  :: 12 of 105
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2817925
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="ST8"
                     /isolate="SA75"
                     /isolation_source="Diabetic foot ulcer"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="USA: Mississippi"
                     /collection_date="2024"
WGS         JBWRHZ010000001-JBWRHZ010000188
WGS_SCAFLD  NZ_JBWRHZ010000001-NZ_JBWRHZ010000188
//
LOCUS       NZ_JBXFWD010000000   4244129 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas chelatiphaga strain STEN073, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXFWD000000000
VERSION     NZ_JBXFWD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52030015
            Assembly: GCF_056854475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas chelatiphaga
  ORGANISM  Stenotrophomonas chelatiphaga
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4244129)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Genomic Analysis of Environmentally Sourced Stenotrophomonas
            Species from Fiji and Australia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4244129)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2026) Australian Institute for Microbiology and
            Infection, University of Technology Sydney, 15 Broadway, Sydney,
            NSW 2007, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFWD000000000.1.
            The Stenotrophomonas chelatiphaga whole genome shotgun (WGS)
            project has the project accession NZ_JBXFWD000000000.  This version
            of the project (01) has the accession number NZ_JBXFWD010000000,
            and consists of sequences JBXFWD010000001-JBXFWD010000102.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 26.6x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854475.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:53:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,811
            CDSs (total)                      :: 3,737
            Genes (coding)                    :: 3,713
            CDSs (with protein)               :: 3,713
            Genes (RNA)                       :: 74
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 7 of 24
            Pseudo Genes (incomplete)         :: 19 of 24
            Pseudo Genes (internal stop)      :: 3 of 24
            Pseudo Genes (multiple problems)  :: 5 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4244129
                     /organism="Stenotrophomonas chelatiphaga"
                     /mol_type="genomic DNA"
                     /strain="STEN073"
                     /isolation_source="River"
                     /db_xref="taxon:517011"
                     /geo_loc_name="Australia"
                     /collection_date="2019"
WGS         JBXFWD010000001-JBXFWD010000102
WGS_SCAFLD  NZ_JBXFWD010000001-NZ_JBXFWD010000102
//
LOCUS       NZ_JBSJDW010000000   4845738 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas maltophilia strain PARNA1/26, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSJDW000000000
VERSION     NZ_JBSJDW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53301078
            Assembly: GCF_056857175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (bases 1 to 4845738)
  AUTHORS   Santana,M.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-NOV-2025) Microbiology, Universidade Federal de
            Vicosa, Avenida Peter Henry Rolfs, VICOSA, Minas Gerais 36570-900,
            Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSJDW000000000.1.
            The Stenotrophomonas maltophilia whole genome shotgun (WGS) project
            has the project accession NZ_JBSJDW000000000.  This version of the
            project (01) has the accession number NZ_JBSJDW010000000, and
            consists of sequences JBSJDW010000001-JBSJDW010000099.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 684x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857175.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:22:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,508
            CDSs (total)                      :: 4,421
            Genes (coding)                    :: 4,357
            CDSs (with protein)               :: 4,357
            Genes (RNA)                       :: 87
            rRNAs                             :: 3, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 14 of 64
            Pseudo Genes (incomplete)         :: 44 of 64
            Pseudo Genes (internal stop)      :: 10 of 64
            Pseudo Genes (multiple problems)  :: 4 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4845738
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /strain="PARNA1/26"
                     /isolation_source="soil"
                     /db_xref="taxon:40324"
                     /geo_loc_name="Brazil"
                     /collection_date="2023"
WGS         JBSJDW010000001-JBSJDW010000099
WGS_SCAFLD  NZ_JBSJDW010000001-NZ_JBSJDW010000099
//
LOCUS       NZ_JBXFVV010000000   4489400 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas hibiscicola strain STEN226, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXFVV000000000
VERSION     NZ_JBXFVV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52030168
            Assembly: GCF_056854305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas hibiscicola
  ORGANISM  Stenotrophomonas hibiscicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (bases 1 to 4489400)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Genomic Analysis of Environmentally Sourced Stenotrophomonas
            Species from Fiji and Australia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4489400)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2026) Australian Institute for Microbiology and
            Infection, University of Technology Sydney, 15 Broadway, Sydney,
            NSW 2007, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFVV000000000.1.
            The Stenotrophomonas hibiscicola whole genome shotgun (WGS) project
            has the project accession NZ_JBXFVV000000000.  This version of the
            project (01) has the accession number NZ_JBXFVV010000000, and
            consists of sequences JBXFVV010000001-JBXFVV010000116.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 18.6x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854305.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:56:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,150
            CDSs (total)                      :: 4,072
            Genes (coding)                    :: 4,030
            CDSs (with protein)               :: 4,030
            Genes (RNA)                       :: 78
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 15 of 42
            Pseudo Genes (incomplete)         :: 29 of 42
            Pseudo Genes (internal stop)      :: 0 of 42
            Pseudo Genes (multiple problems)  :: 2 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4489400
                     /organism="Stenotrophomonas hibiscicola"
                     /mol_type="genomic DNA"
                     /strain="STEN226"
                     /isolation_source="River"
                     /db_xref="taxon:86189"
                     /geo_loc_name="Australia"
                     /collection_date="2021"
WGS         JBXFVV010000001-JBXFVV010000116
WGS_SCAFLD  NZ_JBXFVV010000001-NZ_JBXFVV010000116
//
LOCUS       NZ_JBXFVY010000000   4467377 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas muris strain STEN133, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXFVY000000000
VERSION     NZ_JBXFVY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52030075
            Assembly: GCF_056854375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas muris
  ORGANISM  Stenotrophomonas muris
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4467377)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Genomic Analysis of Environmentally Sourced Stenotrophomonas
            Species from Fiji and Australia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4467377)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2026) Australian Institute for Microbiology and
            Infection, University of Technology Sydney, 15 Broadway, Sydney,
            NSW 2007, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFVY000000000.1.
            The Stenotrophomonas muris whole genome shotgun (WGS) project has
            the project accession NZ_JBXFVY000000000.  This version of the
            project (01) has the accession number NZ_JBXFVY010000000, and
            consists of sequences JBXFVY010000001-JBXFVY010000165.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 13.9x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854375.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:56:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,155
            CDSs (total)                      :: 4,075
            Genes (coding)                    :: 4,028
            CDSs (with protein)               :: 4,028
            Genes (RNA)                       :: 80
            rRNAs                             :: 4, 5, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 3, 5 (5S, 16S)
            tRNAs                             :: 66
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 47
            CDSs (without protein)            :: 47
            Pseudo Genes (ambiguous residues) :: 0 of 47
            Pseudo Genes (frameshifted)       :: 11 of 47
            Pseudo Genes (incomplete)         :: 37 of 47
            Pseudo Genes (internal stop)      :: 5 of 47
            Pseudo Genes (multiple problems)  :: 5 of 47
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4467377
                     /organism="Stenotrophomonas muris"
                     /mol_type="genomic DNA"
                     /strain="STEN133"
                     /isolation_source="Waste Dump"
                     /db_xref="taxon:2963283"
                     /geo_loc_name="Fiji"
                     /collection_date="2021"
WGS         JBXFVY010000001-JBXFVY010000165
WGS_SCAFLD  NZ_JBXFVY010000001-NZ_JBXFVY010000165
//
LOCUS       NZ_JBXFWC010000000   4651704 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas indicatrix strain STEN074, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXFWC000000000
VERSION     NZ_JBXFWC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52030016
            Assembly: GCF_056854455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas indicatrix
  ORGANISM  Stenotrophomonas indicatrix
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4651704)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Genomic Analysis of Environmentally Sourced Stenotrophomonas
            Species from Fiji and Australia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4651704)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2026) Australian Institute for Microbiology and
            Infection, University of Technology Sydney, 15 Broadway, Sydney,
            NSW 2007, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFWC000000000.1.
            The Stenotrophomonas indicatrix whole genome shotgun (WGS) project
            has the project accession NZ_JBXFWC000000000.  This version of the
            project (01) has the accession number NZ_JBXFWC010000000, and
            consists of sequences JBXFWC010000001-JBXFWC010000177.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12.3x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854455.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:49:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,237
            CDSs (total)                      :: 4,166
            Genes (coding)                    :: 4,142
            CDSs (with protein)               :: 4,142
            Genes (RNA)                       :: 71
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 20 of 24
            Pseudo Genes (internal stop)      :: 2 of 24
            Pseudo Genes (multiple problems)  :: 3 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4651704
                     /organism="Stenotrophomonas indicatrix"
                     /mol_type="genomic DNA"
                     /strain="STEN074"
                     /isolation_source="River"
                     /db_xref="taxon:2045451"
                     /geo_loc_name="Australia"
                     /collection_date="2019"
WGS         JBXFWC010000001-JBXFWC010000177
WGS_SCAFLD  NZ_JBXFWC010000001-NZ_JBXFWC010000177
//
LOCUS       NZ_JBSXOQ010000000   5068650 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Sphingobium sp. L-44, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXOQ000000000
VERSION     NZ_JBSXOQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312082
            Assembly: GCF_056859495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sphingobium sp. L-44
  ORGANISM  Sphingobium sp. L-44
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (bases 1 to 5068650)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXOQ000000000.1.
            The Sphingobium sp. L-44 whole genome shotgun (WGS) project has the
            project accession NZ_JBSXOQ000000000.  This version of the project
            (01) has the accession number NZ_JBSXOQ010000000, and consists of
            sequences JBSXOQ010000001-JBSXOQ010000123.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 238.85x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859495.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:28:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,907
            CDSs (total)                      :: 4,846
            Genes (coding)                    :: 4,743
            CDSs (with protein)               :: 4,743
            Genes (RNA)                       :: 61
            rRNAs                             :: 3, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 2, 1 (16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 103
            CDSs (without protein)            :: 103
            Pseudo Genes (ambiguous residues) :: 0 of 103
            Pseudo Genes (frameshifted)       :: 18 of 103
            Pseudo Genes (incomplete)         :: 85 of 103
            Pseudo Genes (internal stop)      :: 12 of 103
            Pseudo Genes (multiple problems)  :: 11 of 103
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5068650
                     /organism="Sphingobium sp. L-44"
                     /mol_type="genomic DNA"
                     /strain="L-44"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472701"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.69187 N 63.83227 E"
                     /collection_date="2022-06"
WGS         JBSXOQ010000001-JBSXOQ010000123
WGS_SCAFLD  NZ_JBSXOQ010000001-NZ_JBSXOQ010000123
//
LOCUS       NZ_JBXFWL010000000   4770033 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas lactitubi strain STEN037, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXFWL000000000
VERSION     NZ_JBXFWL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52029979
            Assembly: GCF_056856635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas lactitubi
  ORGANISM  Stenotrophomonas lactitubi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4770033)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Genomic Analysis of Environmentally Sourced Stenotrophomonas
            Species from Fiji and Australia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4770033)
  AUTHORS   Wyrsch,E., Drigo,B., Li,D. and Djordjevic,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2026) Australian Institute for Microbiology and
            Infection, University of Technology Sydney, 15 Broadway, Sydney,
            NSW 2007, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFWL000000000.1.
            The Stenotrophomonas lactitubi whole genome shotgun (WGS) project
            has the project accession NZ_JBXFWL000000000.  This version of the
            project (01) has the accession number NZ_JBXFWL010000000, and
            consists of sequences JBXFWL010000001-JBXFWL010000173.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 9x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856635.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:09:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,332
            CDSs (total)                      :: 4,258
            Genes (coding)                    :: 4,231
            CDSs (with protein)               :: 4,231
            Genes (RNA)                       :: 74
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 4 of 27
            Pseudo Genes (incomplete)         :: 16 of 27
            Pseudo Genes (internal stop)      :: 8 of 27
            Pseudo Genes (multiple problems)  :: 1 of 27
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4770033
                     /organism="Stenotrophomonas lactitubi"
                     /mol_type="genomic DNA"
                     /strain="STEN037"
                     /isolation_source="Influent Wastewater"
                     /db_xref="taxon:2045214"
                     /geo_loc_name="Australia"
                     /collection_date="2019"
WGS         JBXFWL010000001-JBXFWL010000173
WGS_SCAFLD  NZ_JBXFWL010000001-NZ_JBXFWL010000173
//
LOCUS       NZ_JBWRID010000000   2757281 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus aureus strain ST81 isolate SA39, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBWRID000000000
VERSION     NZ_JBWRID000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56687035
            Assembly: GCF_056864195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2757281)
  AUTHORS   Seo,K.S., Nicols,L.M., Palmer,C.D., Hellmann,K.T., Robinson,D.A.,
            Olivier,A.K., Thornton,J.A., Ferdous,K., Brookshire,C. and
            Park,J.Y.
  TITLE     Clinical severity-dependent pathogenicity and macrophage
            polarization induced by Staphylococcus aureus isolated from
            diabetic foot ulcers in a diabetic murine model
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2757281)
  AUTHORS   Seo,K.S., Nicols,L.M., Palmer,C.D., Hellmann,K.T., Robinson,D.A.,
            Olivier,A.K., Thornton,J.A., Ferdous,K., Brookshire,C. and
            Park,J.Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2026) Cell and Molecular Biology, University of
            Mississippi Medical Center, 2500 N State St, Jackson, MS 39216, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWRID000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBWRID000000000.  This version of the
            project (01) has the accession number NZ_JBWRID010000000, and
            consists of sequences JBWRID010000001-JBWRID010000173.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 14-AUG-2025
            Assembly Method        :: Shovill v. 1.1.0; SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 443x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864195.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:19:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,780
            CDSs (total)                      :: 2,730
            Genes (coding)                    :: 2,632
            CDSs (with protein)               :: 2,632
            Genes (RNA)                       :: 50
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 2, 3 (5S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 98
            CDSs (without protein)            :: 98
            Pseudo Genes (ambiguous residues) :: 0 of 98
            Pseudo Genes (frameshifted)       :: 39 of 98
            Pseudo Genes (incomplete)         :: 57 of 98
            Pseudo Genes (internal stop)      :: 20 of 98
            Pseudo Genes (multiple problems)  :: 16 of 98
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2757281
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="ST81"
                     /isolate="SA39"
                     /isolation_source="Diabetic foot ulcer"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="USA: Mississippi"
                     /collection_date="2024"
WGS         JBWRID010000001-JBWRID010000173
WGS_SCAFLD  NZ_JBWRID010000001-NZ_JBWRID010000173
//
LOCUS       NZ_JBSJDV010000000   4844979 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stenotrophomonas maltophilia strain PARNA5/22, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSJDV000000000
VERSION     NZ_JBSJDV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53301079
            Assembly: GCF_056857135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (bases 1 to 4844979)
  AUTHORS   Santana,M.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-NOV-2025) Microbiology, Universidade Federal de
            Vicosa, Avenida Peter Henry Rolfs, VICOSA, Minas Gerais 36570-900,
            Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSJDV000000000.1.
            The Stenotrophomonas maltophilia whole genome shotgun (WGS) project
            has the project accession NZ_JBSJDV000000000.  This version of the
            project (01) has the accession number NZ_JBSJDV010000000, and
            consists of sequences JBSJDV010000001-JBSJDV010000086.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 734x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857135.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:18:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,501
            CDSs (total)                      :: 4,417
            Genes (coding)                    :: 4,354
            CDSs (with protein)               :: 4,354
            Genes (RNA)                       :: 84
            rRNAs                             :: 3, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 14 of 63
            Pseudo Genes (incomplete)         :: 43 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 4 of 63
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4844979
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /strain="PARNA5/22"
                     /isolation_source="soil"
                     /db_xref="taxon:40324"
                     /geo_loc_name="Brazil"
                     /collection_date="2023"
WGS         JBSJDV010000001-JBSJDV010000086
WGS_SCAFLD  NZ_JBSJDV010000001-NZ_JBSJDV010000086
//
LOCUS       NZ_JBSXNJ010000000   2504600 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus sp. L-20W, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXNJ000000000
VERSION     NZ_JBSXNJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312077
            Assembly: GCF_056857575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus sp. L-20W
  ORGANISM  Staphylococcus sp. L-20W
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2504600)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXNJ000000000.1.
            The Staphylococcus sp. L-20W whole genome shotgun (WGS) project has
            the project accession NZ_JBSXNJ000000000.  This version of the
            project (01) has the accession number NZ_JBSXNJ010000000, and
            consists of sequences JBSXNJ010000001-JBSXNJ010000027.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 462.37x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857575.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:06:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,478
            CDSs (total)                      :: 2,432
            Genes (coding)                    :: 2,354
            CDSs (with protein)               :: 2,354
            Genes (RNA)                       :: 46
            rRNAs                             :: 3, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 36
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 36 of 78
            Pseudo Genes (incomplete)         :: 41 of 78
            Pseudo Genes (internal stop)      :: 23 of 78
            Pseudo Genes (multiple problems)  :: 17 of 78
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2504600
                     /organism="Staphylococcus sp. L-20W"
                     /mol_type="genomic DNA"
                     /strain="L-20W"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472696"
                     /geo_loc_name="Indian Ocean: Southwestern Indian Ridge"
                     /lat_lon="37.93805 S 49.26156 E"
                     /collection_date="2024-05"
WGS         JBSXNJ010000001-JBSXNJ010000027
WGS_SCAFLD  NZ_JBSXNJ010000001-NZ_JBSXNJ010000027
//
LOCUS       NZ_JBWRIE010000000   2870395 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Staphylococcus aureus strain ST8 isolate SA28, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWRIE000000000
VERSION     NZ_JBWRIE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56687034
            Assembly: GCF_056864235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2870395)
  AUTHORS   Seo,K.S., Nicols,L.M., Palmer,C.D., Hellmann,K.T., Robinson,D.A.,
            Olivier,A.K., Thornton,J.A., Ferdous,K., Brookshire,C. and
            Park,J.Y.
  TITLE     Clinical severity-dependent pathogenicity and macrophage
            polarization induced by Staphylococcus aureus isolated from
            diabetic foot ulcers in a diabetic murine model
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2870395)
  AUTHORS   Seo,K.S., Nicols,L.M., Palmer,C.D., Hellmann,K.T., Robinson,D.A.,
            Olivier,A.K., Thornton,J.A., Ferdous,K., Brookshire,C. and
            Park,J.Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2026) Cell and Molecular Biology, University of
            Mississippi Medical Center, 2500 N State St, Jackson, MS 39216, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWRIE000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBWRIE000000000.  This version of the
            project (01) has the accession number NZ_JBWRIE010000000, and
            consists of sequences JBWRIE010000001-JBWRIE010000146.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 14-AUG-2025
            Assembly Method        :: Shovill v. 1.1.0; SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 427x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056864235.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:21:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,910
            CDSs (total)                      :: 2,864
            Genes (coding)                    :: 2,751
            CDSs (with protein)               :: 2,751
            Genes (RNA)                       :: 46
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 113
            CDSs (without protein)            :: 113
            Pseudo Genes (ambiguous residues) :: 0 of 113
            Pseudo Genes (frameshifted)       :: 49 of 113
            Pseudo Genes (incomplete)         :: 66 of 113
            Pseudo Genes (internal stop)      :: 15 of 113
            Pseudo Genes (multiple problems)  :: 16 of 113
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2870395
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="ST8"
                     /isolate="SA28"
                     /isolation_source="Diabetic foot ulcer"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="USA: Mississippi"
                     /collection_date="2024"
WGS         JBWRIE010000001-JBWRIE010000146
WGS_SCAFLD  NZ_JBWRIE010000001-NZ_JBWRIE010000146
//
LOCUS       NZ_AEVF01000000      1633153 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptococcus peroris ATCC 700780, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AEVF00000000
VERSION     NZ_AEVF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00253298
            Assembly: GCF_000187585.1
KEYWORDS    WGS; STANDARD_DRAFT; RefSeq.
SOURCE      Streptococcus peroris ATCC 700780
  ORGANISM  Streptococcus peroris ATCC 700780
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1633153)
  AUTHORS   Muzny,D., Qin,X., Deng,J., Jiang,H., Liu,Y., Qu,J., Song,X.-Z.,
            Zhang,L., Thornton,R., Coyle,M., Francisco,L., Jackson,L.,
            Javaid,M., Korchina,V., Kovar,C., Mata,R., Mathew,T., Ngo,R.,
            Nguyen,L., Nguyen,N., Okwuonu,G., Ongeri,F., Pham,C., Simmons,D.,
            Wilczek-Boney,K., Hale,W., Jakkamsetti,A., Pham,P., Ruth,R., San
            Lucas,F., Warren,J., Zhang,J., Zhao,Z., Zhou,C., Zhu,D., Lee,S.,
            Bess,C., Blankenburg,K., Forbes,L., Fu,Q., Gubbala,S., Hirani,K.,
            Jayaseelan,J.C., Lara,F., Munidasa,M., Palculict,T., Patil,S.,
            Pu,L.-L., Saada,N., Tang,L., Weissenberger,G., Zhu,Y., Hemphill,L.,
            Shang,Y., Youmans,B., Ayvaz,T., Ross,M., Santibanez,J., Aqrawi,P.,
            Gross,S., Joshi,V., Fowler,G., Nazareth,L., Reid,J., Worley,K.,
            Petrosino,J., Highlander,S. and Gibbs,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-DEC-2010) Human Genome Sequencing Center, Baylor
            College of Medicine, One Baylor Plaza, Houston, TX 77030, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AEVF00000000.1.
            
            On Jun 27, 2014 this sequence version replaced gi:322392793.
            The Streptococcus peroris ATCC 700780 whole genome shotgun (WGS)
            project has the project accession NZ_AEVF00000000.  This version of
            the project (01) has the accession number NZ_AEVF01000000, and
            consists of sequences AEVF01000001-AEVF01000017.
            Streptococcus peroris oral taxon 728 ATCC 700780
            
             Strain source, body site: Oral
            
             Inquiries should be directed to microbe@hgsc.bcm.tmc.edu
            
             This is a reference genome for the Human Microbiome Project. This
            project is co-owned with the Human Microbiome Project DACC. This
            sequence is generated as a part of the Human Microbiome Project
            (HMP), funded by the National Institutes of Health (NIH), National
            Human Genome Research Institute (NHGRI), Large-Scale Sequencing
            Research Network and the National Institute of Allergy and
            Infectious Diseases (NIAID) Microbial Genome Sequencing Centers
            Program. The mission of the HMP is to generate resources to enable
            the characterization of the human microbiota, the microbial
            communities living within human bodies, and analyze the role of
            these organisms in human health and disease. See
            http://www.hmpdacc.org for more information.
            
             The sequenced strain was obtained from ATCC. The genomic DNA was
            prepared from a single bacterial isolate. The sequence generated
            included at least 10 fold coverage of Roche/454 Lifesciences FLX
            fragment data and at least 8 fold clone coverage of Roche/454
            Lifesciences paired-end data. The Roche/454 Lifesciences sequence
            was assembled using the Roche/454 Lifescience Newbler assembler.
            This draft assembly meets the HMP draft quality standards (more
            than 90% of the genome is included in contigs, more than 90% of a
            core set of bacterial genes are found with > 30% identity and > 30%
            length; more than 90% of the bases in the assembly have more than 5
            fold sequence coverage, the contig N50 length is greater than 5kb,
            the scaffold N50 length is greater than 20kb, and there is less
            than 1 gap per 5kb).
            Product names were updated in June 2013.
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Standard Draft
            Current Finishing Status :: Standard Draft
            Assembly Method          :: Newbler Assembler v. 2.3-04192010
            Genome Coverage          :: 35.6x
            Sequencing Technology    :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000187585.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 09:52:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,654
            CDSs (total)                      :: 1,619
            Genes (coding)                    :: 1,589
            CDSs (with protein)               :: 1,589
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 29
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 30
            CDSs (without protein)            :: 30
            Pseudo Genes (ambiguous residues) :: 0 of 30
            Pseudo Genes (frameshifted)       :: 15 of 30
            Pseudo Genes (incomplete)         :: 13 of 30
            Pseudo Genes (internal stop)      :: 5 of 30
            Pseudo Genes (multiple problems)  :: 3 of 30
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1633153
                     /organism="Streptococcus peroris ATCC 700780"
                     /mol_type="genomic DNA"
                     /strain="ATCC 700780"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:700780"
                     /type_material="type strain of Streptococcus peroris"
                     /db_xref="HMP:9180"
                     /db_xref="HOMD:tax_728"
                     /db_xref="taxon:888746"
                     /note="Streptococcus peroris oral taxon 728 ATCC 700780"
WGS         AEVF01000001-AEVF01000017
WGS_SCAFLD  NZ_GL732463-NZ_GL732465
//
LOCUS       NZ_JNXG01000000      8216207 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces atroolivaceus strain NRRL ISP-5137, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JNXG00000000
VERSION     NZ_JNXG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02645281
            Assembly: GCF_000717025.1
KEYWORDS    WGS; HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Streptomyces atroolivaceus
  ORGANISM  Streptomyces atroolivaceus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 8216207)
  AUTHORS   Doroghazi,J.R., Albright,J.C., Goering,A.W., Ju,K.-S., Haines,R.R.,
            Tchalukov,K.A., Labeda,D.P., Kelleher,N.L. and Metcalf,W.W.
  TITLE     A Roadmap for Natural Product Discovery Based on Large-Scale
            Genomics and Metabolomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8216207)
  AUTHORS   Doroghazi,J.R., Ju,K.-S. and Metcalf,W.W.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2014) Institute for Genomic Biology, University
            of Illinois at Urbana-Champaign, 3109 IGB, MC-195, Urbana, IL
            61801, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JNXG00000000.1.
            The Streptomyces atroolivaceus whole genome shotgun (WGS) project
            has the project accession NZ_JNXG00000000.  This version of the
            project (01) has the accession number NZ_JNXG01000000, and consists
            of sequences JNXG01000001-JNXG01000106.
            Bacteria available from NRRL.
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: High-Quality Draft
            Current Finishing Status :: High-Quality Draft
            Assembly Method          :: IDBA UD v. 1.0.9
            Genome Coverage          :: 232x
            Sequencing Technology    :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000717025.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:51:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,318
            CDSs (total)                      :: 7,241
            Genes (coding)                    :: 6,980
            CDSs (with protein)               :: 6,980
            Genes (RNA)                       :: 77
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2 (5S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 261
            CDSs (without protein)            :: 261
            Pseudo Genes (ambiguous residues) :: 0 of 261
            Pseudo Genes (frameshifted)       :: 107 of 261
            Pseudo Genes (incomplete)         :: 217 of 261
            Pseudo Genes (internal stop)      :: 22 of 261
            Pseudo Genes (multiple problems)  :: 77 of 261
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8216207
                     /organism="Streptomyces atroolivaceus"
                     /mol_type="genomic DNA"
                     /strain="NRRL ISP-5137"
                     /isolation_source="soil"
                     /culture_collection="NRRL:ISP-5137"
                     /type_material="type strain of Streptomyces atroolivaceus"
                     /db_xref="taxon:66869"
                     /collection_date="2010"
WGS         JNXG01000001-JNXG01000106
WGS_SCAFLD  NZ_JNXG01000001-NZ_JNXG01000106
//
LOCUS       NZ_MUAY01000000      7459114 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces angustmyceticus strain NRRL B-2347, whole genome
            shotgun sequencing project.
ACCESSION   NZ_MUAY00000000
VERSION     NZ_MUAY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06276655
            Assembly: GCF_002154415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces angustmyceticus
  ORGANISM  Streptomyces angustmyceticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 7459114)
  AUTHORS   Labeda,D.P.
  TITLE     Phylogenetic evaluation of the family Streptomycetaceae using
            muliti-locus sequence data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7459114)
  AUTHORS   Labeda,D.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JAN-2017) Mycotoxin Prevention and Applied
            Microbiology Research, USDA/ARS/NCAUR, 1815 N. University Street,
            Peoria, IL 61604, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MUAY00000000.1.
            The Streptomyces angustmyceticus whole genome shotgun (WGS) project
            has the project accession NZ_MUAY00000000.  This version of the
            project (01) has the accession number NZ_MUAY01000000, and consists
            of sequences MUAY01000001-MUAY01000874.
            Bacteria and source DNA available from NRRL Culture Collection,
            Peoria, IL.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 15-DEC-2016
            Assembly Method        :: CLC Genomics Workbench v. 9.5.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002154415.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:41:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,955
            CDSs (total)                      :: 6,894
            Genes (coding)                    :: 6,528
            CDSs (with protein)               :: 6,528
            Genes (RNA)                       :: 61
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 366
            CDSs (without protein)            :: 366
            Pseudo Genes (ambiguous residues) :: 0 of 366
            Pseudo Genes (frameshifted)       :: 85 of 366
            Pseudo Genes (incomplete)         :: 310 of 366
            Pseudo Genes (internal stop)      :: 3 of 366
            Pseudo Genes (multiple problems)  :: 31 of 366
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7459114
                     /organism="Streptomyces angustmyceticus"
                     /mol_type="genomic DNA"
                     /strain="NRRL B-2347"
                     /isolation_source="soil"
                     /culture_collection="NRRL:B-2347"
                     /type_material="type strain of Streptomyces hygroscopicus
                     subsp. angustmyceticus"
                     /db_xref="taxon:285578"
                     /geo_loc_name="Japan"
                     /collection_date="1959"
WGS         MUAY01000001-MUAY01000874
WGS_SCAFLD  NZ_MUAY01000001-NZ_MUAY01000874
//
LOCUS       NZ_MUKA01000000      9111873 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces africanus strain NRRL B-24243, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MUKA00000000
VERSION     NZ_MUKA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06271532
            Assembly: GCF_002150735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces africanus
  ORGANISM  Streptomyces africanus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 9111873)
  AUTHORS   Labeda,D.P.
  TITLE     Multigene phylogeny of the Streptomycetaceae
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 9111873)
  AUTHORS   Labeda,D.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JAN-2017) Mycotoxin Prevention and Appllied
            Microbiology Research, USDA/ARS/NCAUR, 1815 N. University Street,
            Peoria, IL 61604, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MUKA00000000.1.
            The Streptomyces africanus whole genome shotgun (WGS) project has
            the project accession NZ_MUKA00000000.  This version of the project
            (01) has the accession number NZ_MUKA01000000, and consists of
            sequences MUKA01000001-MUKA01000736.
            Bacteria and source DNA available from ARS Culture Collection,
            Peoria, IL.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 16-DEC-2016
            Assembly Method        :: CLC Genomics Workbench v. 9.5.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002150735.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:48:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,801
            CDSs (total)                      :: 8,720
            Genes (coding)                    :: 8,236
            CDSs (with protein)               :: 8,236
            Genes (RNA)                       :: 81
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 72
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 484
            CDSs (without protein)            :: 484
            Pseudo Genes (ambiguous residues) :: 3 of 484
            Pseudo Genes (frameshifted)       :: 133 of 484
            Pseudo Genes (incomplete)         :: 403 of 484
            Pseudo Genes (internal stop)      :: 15 of 484
            Pseudo Genes (multiple problems)  :: 61 of 484
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9111873
                     /organism="Streptomyces africanus"
                     /mol_type="genomic DNA"
                     /strain="NRRL B-24243"
                     /isolation_source="soil"
                     /culture_collection="NRRL:B-24243"
                     /type_material="type strain of Streptomyces africanus"
                     /db_xref="taxon:231024"
                     /geo_loc_name="South Africa: Cape Town"
                     /collection_date="2003"
WGS         MUKA01000001-MUKA01000736
WGS_SCAFLD  NZ_MUKA01000001-NZ_MUKA01000736
//
LOCUS       NZ_MUBA01000000      8059380 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces bobili strain NRRL B-1338, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MUBA00000000
VERSION     NZ_MUBA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06277082
            Assembly: GCF_002154575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces bobili
  ORGANISM  Streptomyces bobili
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 8059380)
  AUTHORS   Labeda,D.P.
  TITLE     Phylogenetic evaluation of the family Streptomycetaceae using
            muliti-locus sequence data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8059380)
  AUTHORS   Labeda,D.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JAN-2017) Mycotoxin Prevention and Applied
            Microbiology Research, USDA/ARS/NCAUR, 1815 N. University Street,
            Peoria, IL 61604, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MUBA00000000.1.
            The Streptomyces bobili whole genome shotgun (WGS) project has the
            project accession NZ_MUBA00000000.  This version of the project
            (01) has the accession number NZ_MUBA01000000, and consists of
            sequences MUBA01000001-MUBA01000946.
            Bacteria and source DNA available from ARS Culture Collection,
            Peoria, IL.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 15-DEC-2017
            Assembly Method        :: CLC Genomics Workbench v. 9.5.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002154575.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:43:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,821
            CDSs (total)                      :: 7,746
            Genes (coding)                    :: 7,286
            CDSs (with protein)               :: 7,286
            Genes (RNA)                       :: 75
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 66
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 460
            CDSs (without protein)            :: 460
            Pseudo Genes (ambiguous residues) :: 0 of 460
            Pseudo Genes (frameshifted)       :: 87 of 460
            Pseudo Genes (incomplete)         :: 404 of 460
            Pseudo Genes (internal stop)      :: 9 of 460
            Pseudo Genes (multiple problems)  :: 37 of 460
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8059380
                     /organism="Streptomyces bobili"
                     /mol_type="genomic DNA"
                     /strain="NRRL B-1338"
                     /isolation_source="soil"
                     /culture_collection="NRRL:B-1338"
                     /type_material="type strain of Streptomyces bobili"
                     /db_xref="taxon:67280"
                     /geo_loc_name="USA: New Jersey"
                     /collection_date="1951"
WGS         MUBA01000001-MUBA01000946
WGS_SCAFLD  NZ_MUBA01000001-NZ_MUBA01000946
//
LOCUS       NZ_MUAX01000000      7234208 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces albovinaceus strain NRRL B-2566, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MUAX00000000
VERSION     NZ_MUAX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06276569
            Assembly: GCF_002154385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces albovinaceus
  ORGANISM  Streptomyces albovinaceus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 7234208)
  AUTHORS   Labeda,D.P.
  TITLE     Phylogenetic evaluation of the family Streptomycetaceae using
            muliti-locus sequence data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7234208)
  AUTHORS   Labeda,D.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JAN-2017) Mycotoxin Prevention and Applied
            Microbiology Research, USDA/ARS/NCAUR, 1815 N. University Street,
            Peoria, IL 61604, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MUAX00000000.1.
            The Streptomyces albovinaceus whole genome shotgun (WGS) project
            has the project accession NZ_MUAX00000000.  This version of the
            project (01) has the accession number NZ_MUAX01000000, and consists
            of sequences MUAX01000001-MUAX01000594.
            Bacteria and source DNA available from ARS Culture Collection,
            Peoria, IL.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-DEC-2016
            Assembly Method        :: CLC Genomics Workbench v. 9.5.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002154385.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:46:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,913
            CDSs (total)                      :: 6,842
            Genes (coding)                    :: 6,460
            CDSs (with protein)               :: 6,460
            Genes (RNA)                       :: 71
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 382
            CDSs (without protein)            :: 382
            Pseudo Genes (ambiguous residues) :: 0 of 382
            Pseudo Genes (frameshifted)       :: 83 of 382
            Pseudo Genes (incomplete)         :: 321 of 382
            Pseudo Genes (internal stop)      :: 10 of 382
            Pseudo Genes (multiple problems)  :: 30 of 382
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7234208
                     /organism="Streptomyces albovinaceus"
                     /mol_type="genomic DNA"
                     /strain="NRRL B-2566"
                     /isolation_source="soil"
                     /culture_collection="NRRL:B-2566"
                     /type_material="type strain of Streptomyces albovinaceus"
                     /db_xref="taxon:66867"
                     /geo_loc_name="Russia"
                     /collection_date="1956"
WGS         MUAX01000001-MUAX01000594
WGS_SCAFLD  NZ_MUAX01000001-NZ_MUAX01000594
//
LOCUS       NZ_MUBM01000000     10400713 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces carpinensis strain NRRL B-16921, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MUBM00000000
VERSION     NZ_MUBM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06277327
            Assembly: GCF_002154505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces carpinensis
  ORGANISM  Streptomyces carpinensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 10400713)
  AUTHORS   Labeda,D.P.
  TITLE     Phylogenetic evaluation of the family Streptomycetaceae using
            muliti-locus sequence data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 10400713)
  AUTHORS   Labeda,D.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JAN-2017) Mycotoxin Prevention and Appllied
            Microbiology Research, USDA/ARS/NCAUR, 1815 N. University Street,
            Peoria, IL 61604, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MUBM00000000.1.
            The Streptomyces carpinensis whole genome shotgun (WGS) project has
            the project accession NZ_MUBM00000000.  This version of the project
            (01) has the accession number NZ_MUBM01000000, and consists of
            sequences MUBM01000001-MUBM01000824.
            Bacteria and source DNA available from ARS Culture Collection,
            Peoria, IL.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-DEC-2017
            Assembly Method        :: CLC Genomics Workbench v. 9.5.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 90.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002154505.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:50:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 9,915
            CDSs (total)                      :: 9,837
            Genes (coding)                    :: 9,158
            CDSs (with protein)               :: 9,158
            Genes (RNA)                       :: 78
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 70
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 679
            CDSs (without protein)            :: 679
            Pseudo Genes (ambiguous residues) :: 1 of 679
            Pseudo Genes (frameshifted)       :: 239 of 679
            Pseudo Genes (incomplete)         :: 568 of 679
            Pseudo Genes (internal stop)      :: 34 of 679
            Pseudo Genes (multiple problems)  :: 152 of 679
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10400713
                     /organism="Streptomyces carpinensis"
                     /mol_type="genomic DNA"
                     /strain="NRRL B-16921"
                     /isolation_source="soil"
                     /culture_collection="NRRL:B-16921"
                     /type_material="type strain of Streptomyces carpinensis"
                     /db_xref="taxon:66369"
                     /geo_loc_name="Brazil: Carpina, Pernambuco"
                     /collection_date="1971"
WGS         MUBM01000001-MUBM01000824
WGS_SCAFLD  NZ_MUBM01000001-NZ_MUBM01000824
//
LOCUS       NZ_QEMY02000000      1880608 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptococcus halitosis strain VT-4, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QEMY00000000
VERSION     NZ_QEMY00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08929985
            Assembly: GCF_003143695.2
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus halitosis
  ORGANISM  Streptococcus halitosis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1880608)
  AUTHORS   Tetz,V. and Tetz,G.
  TITLE     Streptococcus halitosis sp. nov. isolated from oral cavity of
            patient with halitosis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1880608)
  AUTHORS   Tetz,V. and Tetz,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-NOV-2018) R&D, Human Microbiology Institute, 423 West
            127th street, New York, NY 10027, USA
REFERENCE   3  (bases 1 to 1880608)
  AUTHORS   Tetz,V. and Tetz,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-APR-2018) R&D, Human Microbiology Institute, 423 West
            127th Street, New York, NY 10027, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QEMY00000000.2.
            
            On Dec 11, 2018 this sequence version replaced NZ_QEMY00000000.1.
            The Streptococcus halitosis whole genome shotgun (WGS) project has
            the project accession NZ_QEMY00000000.  This version of the project
            (02) has the accession number NZ_QEMY02000000, and consists of
            sequences QEMY02000001-QEMY02000018.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 2017
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 130.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003143695.2-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:05:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,858
            CDSs (total)                      :: 1,802
            Genes (coding)                    :: 1,769
            CDSs (with protein)               :: 1,769
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 8 of 33
            Pseudo Genes (incomplete)         :: 17 of 33
            Pseudo Genes (internal stop)      :: 13 of 33
            Pseudo Genes (multiple problems)  :: 5 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1880608
                     /organism="Streptococcus halitosis"
                     /mol_type="genomic DNA"
                     /strain="VT-4"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /type_material="type strain of Streptococcus halitosis"
                     /db_xref="taxon:2172545"
                     /geo_loc_name="USA: New York, NY"
                     /collection_date="2017"
WGS         QEMY02000001-QEMY02000018
WGS_SCAFLD  NZ_QEMY02000001-NZ_QEMY02000018
//
LOCUS       NZ_SRRP01000000      2160084 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptococcus rubneri strain DSM 26920, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SRRP00000000
VERSION     NZ_SRRP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11349107
            Assembly: GCF_004785935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus rubneri
  ORGANISM  Streptococcus rubneri
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2160084)
  AUTHORS   Kook,J.-K., Park,S.-N. and Lim,Y.K.
  TITLE     Genome sequencing of Streptococcus rubneri DSM 26920(T)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2160084)
  AUTHORS   Kook,J.-K., Park,S.-N. and Lim,Y.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-APR-2019) Department of Oral Biochemistry, School of
            Dentistry, Korean Collection for Oral Microbiology, 309
            Pilum-daero, Dong-gu, Gwangju 61452, Korea, Republic of
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SRRP00000000.1.
            The Streptococcus rubneri whole genome shotgun (WGS) project has
            the project accession NZ_SRRP00000000.  This version of the project
            (01) has the accession number NZ_SRRP01000000, and consists of
            sequences SRRP01000001-SRRP01000004.
            Bacteria and source DNA available from Korean Collection for Oral
            Microbiology.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 912.6x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004785935.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:26:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 1,992
            Genes (coding)                    :: 1,954
            CDSs (with protein)               :: 1,954
            Genes (RNA)                       :: 49
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 38
            CDSs (without protein)            :: 38
            Pseudo Genes (ambiguous residues) :: 0 of 38
            Pseudo Genes (frameshifted)       :: 8 of 38
            Pseudo Genes (incomplete)         :: 34 of 38
            Pseudo Genes (internal stop)      :: 4 of 38
            Pseudo Genes (multiple problems)  :: 8 of 38
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2160084
                     /organism="Streptococcus rubneri"
                     /mol_type="genomic DNA"
                     /strain="DSM 26920"
                     /isolation_source="throat of a healthy human volunteer"
                     /host="Homo sapiens"
                     /culture_collection="DSM:26920"
                     /type_material="type strain of Streptococcus rubneri"
                     /db_xref="taxon:1234680"
                     /geo_loc_name="Germany: Karlsruhe"
                     /lat_lon="49.33 N 8.2414 E"
                     /collection_date="2007-06"
                     /collected_by="Nutrition and Food, Karlsruhe, Germany"
WGS         SRRP01000001-SRRP01000004
WGS_SCAFLD  NZ_SRRP01000001-NZ_SRRP01000004
//
LOCUS       NZ_WLZU01000000      1891345 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptococcus halichoeri strain CCUG48324, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WLZU00000000
VERSION     NZ_WLZU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13318519
            Assembly: GCF_009870755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus halichoeri
  ORGANISM  Streptococcus halichoeri
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1891345)
  AUTHORS   Aaltonen,K., Kant,R., Eklund,M., Raunio-Saarnisto,M., Vapalahti,O.,
            Paulin,L., Rantala,M. and Sironen,T.
  TITLE     Comparative Genomics of Streptococcus halichoeri
  JOURNAL   Int J Genomics (2020) In press
REFERENCE   2  (bases 1 to 1891345)
  AUTHORS   Aaltonen,K., Kant,R., Eklund,M., Raunio-Saarnisto,M., Vapalahti,O.,
            Paulin,L., Rantala,M. and Sironen,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-NOV-2019) Department of Veterinary Biosciences,
            Faculty of Veterinary Medicine, FIN-00014 University of Helsinki,
            Helsinki University, Mustialankatu 1, Helsinki 00014, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WLZU00000000.1.
            The Streptococcus halichoeri whole genome shotgun (WGS) project has
            the project accession NZ_WLZU00000000.  This version of the project
            (01) has the accession number NZ_WLZU01000000, and consists of
            sequences WLZU01000001-WLZU01000054.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 280.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009870755.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:50:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,734
            CDSs (total)                      :: 1,687
            Genes (coding)                    :: 1,618
            CDSs (with protein)               :: 1,618
            Genes (RNA)                       :: 47
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 26 of 69
            Pseudo Genes (incomplete)         :: 44 of 69
            Pseudo Genes (internal stop)      :: 10 of 69
            Pseudo Genes (multiple problems)  :: 10 of 69
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1891345
                     /organism="Streptococcus halichoeri"
                     /mol_type="genomic DNA"
                     /strain="CCUG48324"
                     /host="Seal"
                     /type_material="type strain of Streptococcus halichoeri"
                     /db_xref="taxon:254785"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2003"
WGS         WLZU01000001-WLZU01000054
WGS_SCAFLD  NZ_WLZU01000001-NZ_WLZU01000054
//
LOCUS       NZ_SRRT01000000      6747476 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces bauhiniae strain Bv016, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SRRT00000000
VERSION     NZ_SRRT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11349270
            Assembly: GCF_004784475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces bauhiniae
  ORGANISM  Streptomyces bauhiniae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 6747476)
  AUTHORS   Kanchanasin,P., Tanasupawat,S., Yuki,M. and Kudo,T.
  TITLE     Streptomyces sp. nov. Bv016 isolated from bark of Buahinia
            variegata
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6747476)
  AUTHORS   Kanchanasin,P., Tanasupawat,S., Yuki,M. and Kudo,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-APR-2019) Biochemistry and Microbiology, Faculty of
            Pharmaceutical Sciences, Chulalongkorn University, 254 Phyathai
            Rd., Bangkok 10330, Thailand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SRRT00000000.1.
            The Streptomyces bauhiniae whole genome shotgun (WGS) project has
            the project accession NZ_SRRT00000000.  This version of the project
            (01) has the accession number NZ_SRRT01000000, and consists of
            sequences SRRT01000001-SRRT01000016.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 500x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004784475.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:30:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,220
            CDSs (total)                      :: 6,141
            Genes (coding)                    :: 6,056
            CDSs (with protein)               :: 6,056
            Genes (RNA)                       :: 79
            rRNAs                             :: 6, 2 (5S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 85
            CDSs (without protein)            :: 85
            Pseudo Genes (ambiguous residues) :: 0 of 85
            Pseudo Genes (frameshifted)       :: 31 of 85
            Pseudo Genes (incomplete)         :: 61 of 85
            Pseudo Genes (internal stop)      :: 10 of 85
            Pseudo Genes (multiple problems)  :: 15 of 85
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6747476
                     /organism="Streptomyces bauhiniae"
                     /mol_type="genomic DNA"
                     /strain="Bv016"
                     /isolation_source="Bark"
                     /host="Buahinia variegata"
                     /type_material="type strain of Streptomyces bauhiniae"
                     /db_xref="taxon:2340725"
                     /geo_loc_name="Thailand"
                     /collection_date="2015-08-18"
WGS         SRRT01000001-SRRT01000016
WGS_SCAFLD  NZ_SRRT01000001-NZ_SRRT01000016
//
LOCUS       NZ_VIWW01000000      7540224 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces brevispora strain DSM 42059, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VIWW00000000
VERSION     NZ_VIWW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12025563
            Assembly: GCF_007829885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces brevispora
  ORGANISM  Streptomyces brevispora
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 7540224)
  AUTHORS   Klenk,H.-P.
  TITLE     Sequencing the genomes of 1000 actinobacteria strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7540224)
  AUTHORS   Klenk,H.-P., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JUN-2019) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VIWW00000000.1.
            The Streptomyces brevispora whole genome shotgun (WGS) project has
            the project accession NZ_VIWW00000000.  This version of the project
            (01) has the accession number NZ_VIWW01000000, and consists of
            sequences VIWW01000001-VIWW01000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. smrtlink/6.0.0.47835, HGAP 4
                                      (0.2.1)
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 464.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007829885.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:40:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,885
            CDSs (total)                      :: 6,796
            Genes (coding)                    :: 6,478
            CDSs (with protein)               :: 6,478
            Genes (RNA)                       :: 89
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 318
            CDSs (without protein)            :: 318
            Pseudo Genes (ambiguous residues) :: 0 of 318
            Pseudo Genes (frameshifted)       :: 86 of 318
            Pseudo Genes (incomplete)         :: 288 of 318
            Pseudo Genes (internal stop)      :: 9 of 318
            Pseudo Genes (multiple problems)  :: 64 of 318
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7540224
                     /organism="Streptomyces brevispora"
                     /mol_type="genomic DNA"
                     /strain="DSM 42059"
                     /culture_collection="DSM:42059"
                     /type_material="type strain of Streptomyces brevispora"
                     /db_xref="taxon:887462"
WGS         VIWW01000001-VIWW01000003
WGS_SCAFLD  NZ_VIWW01000001-NZ_VIWW01000003
//
LOCUS       NZ_PDCM01000000      9252595 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces albofaciens JCM 4342 strain ATCC 23873, whole genome
            shotgun sequencing project.
ACCESSION   NZ_PDCM00000000
VERSION     NZ_PDCM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07709096
            Assembly: GCF_008634025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces albofaciens JCM 4342
  ORGANISM  Streptomyces albofaciens JCM 4342
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 9252595)
  AUTHORS   Lee,N. and Cho,B.-K.
  TITLE     Streptomyces genome completion
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 9252595)
  AUTHORS   Lee,N. and Cho,B.-K.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2018) Biological Science, KAIST, 291 Daehak-ro,
            Daejeon 34141, South Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PDCM00000000.1.
            The Streptomyces albofaciens JCM 4342 whole genome shotgun (WGS)
            project has the project accession NZ_PDCM00000000.  This version of
            the project (01) has the accession number NZ_PDCM01000000, and
            consists of sequences PDCM01000001-PDCM01000002.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. 2.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_008634025.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:47:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,923
            CDSs (total)                      :: 7,831
            Genes (coding)                    :: 7,696
            CDSs (with protein)               :: 7,696
            Genes (RNA)                       :: 92
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 135
            CDSs (without protein)            :: 135
            Pseudo Genes (ambiguous residues) :: 0 of 135
            Pseudo Genes (frameshifted)       :: 42 of 135
            Pseudo Genes (incomplete)         :: 114 of 135
            Pseudo Genes (internal stop)      :: 10 of 135
            Pseudo Genes (multiple problems)  :: 27 of 135
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9252595
                     /organism="Streptomyces albofaciens JCM 4342"
                     /mol_type="genomic DNA"
                     /strain="ATCC 23873"
                     /isolation_source="soil"
                     /culture_collection="ATCC:23873"
                     /type_material="type strain of Streptomyces albofaciens"
                     /db_xref="taxon:1306175"
WGS         PDCM01000001-PDCM01000002
WGS_SCAFLD  NZ_PDCM01000001-NZ_PDCM01000002
//
LOCUS       NZ_VIWV01000000      8432708 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces capillispiralis strain DSM 41695, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VIWV00000000
VERSION     NZ_VIWV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12024770
            Assembly: GCF_007829875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces capillispiralis
  ORGANISM  Streptomyces capillispiralis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 8432708)
  AUTHORS   Klenk,H.-P.
  TITLE     Sequencing the genomes of 1000 actinobacteria strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8432708)
  AUTHORS   Klenk,H.-P., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JUN-2019) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VIWV00000000.1.
            The Streptomyces capillispiralis whole genome shotgun (WGS) project
            has the project accession NZ_VIWV00000000.  This version of the
            project (01) has the accession number NZ_VIWV01000000, and consists
            of sequences VIWV01000001-VIWV01000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. smrtlink/6.0.0.47835, HGAP 4
                                      (0.2.1)
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 248.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007829875.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,253
            CDSs (total)                      :: 7,163
            Genes (coding)                    :: 7,030
            CDSs (with protein)               :: 7,030
            Genes (RNA)                       :: 90
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 61 of 133
            Pseudo Genes (incomplete)         :: 102 of 133
            Pseudo Genes (internal stop)      :: 5 of 133
            Pseudo Genes (multiple problems)  :: 33 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8432708
                     /organism="Streptomyces capillispiralis"
                     /mol_type="genomic DNA"
                     /strain="DSM 41695"
                     /culture_collection="DSM:41695"
                     /type_material="type strain of Streptomyces
                     capillispiralis"
                     /db_xref="taxon:68182"
WGS         VIWV01000001-VIWV01000003
WGS_SCAFLD  NZ_VIWV01000001-NZ_VIWV01000003
//
LOCUS       NZ_QYCF01000000      1981226 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptococcus mutans strain UAB-8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_QYCF00000000
VERSION     NZ_QYCF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09101747
            Assembly: GCF_012642265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans
  ORGANISM  Streptococcus mutans
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1981226)
  AUTHORS   Momeni,S.S., Beno,S.M., Baker,J.L., Edlund,A., Ghazal,T.,
            Childers,N.K. and Wu,H.
  TITLE     Caries-Associated Biosynthetic Gene Clusters in Streptococcus
            mutans
  JOURNAL   J Dent Res 99 (8), 969-976 (2020)
   PUBMED   32298190
REFERENCE   2  (bases 1 to 1981226)
  AUTHORS   Momeni,S. and Childers,N.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-DEC-2018) Pediatric Dentistry, University of Alabama
            at Birmingham, LHRB 238, 701 19th Street South, Birmingham, AL
            35294-0007, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QYCF00000000.1.
            The Streptococcus mutans whole genome shotgun (WGS) project has the
            project accession NZ_QYCF00000000.  This version of the project
            (01) has the accession number NZ_QYCF01000000, and consists of
            sequences QYCF01000001-QYCF01000023.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: SEP-2018
            Assembly Method        :: SPAdes v. 3.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 27.591871921182268x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_012642265.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:08:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,894
            Genes (coding)                    :: 1,826
            CDSs (with protein)               :: 1,826
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 35 of 68
            Pseudo Genes (incomplete)         :: 36 of 68
            Pseudo Genes (internal stop)      :: 25 of 68
            Pseudo Genes (multiple problems)  :: 22 of 68
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1981226
                     /organism="Streptococcus mutans"
                     /mol_type="genomic DNA"
                     /strain="UAB-8"
                     /serotype="C"
                     /isolation_source="plaque"
                     /host="Homo sapiens"
                     /db_xref="taxon:1309"
                     /geo_loc_name="USA: Alabama"
                     /lat_lon="32.44 N 87.51 W"
                     /collection_date="2010-08-24"
                     /collected_by="Noel Childers-UAB"
                     /genotype="G06"
WGS         QYCF01000001-QYCF01000023
WGS_SCAFLD  NZ_QYCF01000001-NZ_QYCF01000023
//
LOCUS       NZ_RXZA01000000      1977024 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptococcus mutans strain UAB-15, whole genome shotgun sequencing
            project.
ACCESSION   NZ_RXZA00000000
VERSION     NZ_RXZA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09101754
            Assembly: GCF_012641575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans
  ORGANISM  Streptococcus mutans
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1977024)
  AUTHORS   Momeni,S.S., Beno,S.M., Baker,J.L., Edlund,A., Ghazal,T.,
            Childers,N.K. and Wu,H.
  TITLE     Caries-Associated Biosynthetic Gene Clusters in Streptococcus
            mutans
  JOURNAL   J Dent Res 99 (8), 969-976 (2020)
   PUBMED   32298190
REFERENCE   2  (bases 1 to 1977024)
  AUTHORS   Momeni,S. and Childers,N.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-DEC-2018) Pediatric Dentistry, University of Alabama
            at Birmingham, LHRB 238, 701 19th Street South, Birmingham, AL
            35294-0007, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RXZA00000000.1.
            The Streptococcus mutans whole genome shotgun (WGS) project has the
            project accession NZ_RXZA00000000.  This version of the project
            (01) has the accession number NZ_RXZA01000000, and consists of
            sequences RXZA01000001-RXZA01000011.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: SEP-2018
            Assembly Method        :: SPAdes v. 3.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 97.5x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_012641575.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:56:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,956
            CDSs (total)                      :: 1,903
            Genes (coding)                    :: 1,835
            CDSs (with protein)               :: 1,835
            Genes (RNA)                       :: 53
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 38 of 68
            Pseudo Genes (incomplete)         :: 40 of 68
            Pseudo Genes (internal stop)      :: 15 of 68
            Pseudo Genes (multiple problems)  :: 20 of 68
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1977024
                     /organism="Streptococcus mutans"
                     /mol_type="genomic DNA"
                     /strain="UAB-15"
                     /serotype="K"
                     /isolation_source="plaque"
                     /host="Homo sapiens"
                     /db_xref="taxon:1309"
                     /geo_loc_name="USA: Alabama"
                     /lat_lon="32.44 N 87.51 W"
                     /collection_date="2008-03-04"
                     /collected_by="Noel Childers-UAB"
                     /genotype="G27"
WGS         RXZA01000001-RXZA01000011
WGS_SCAFLD  NZ_RXZA01000001-NZ_RXZA01000011
//
LOCUS       NZ_QYBS01000000      2073407 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptococcus mutans strain UAB-28, whole genome shotgun sequencing
            project.
ACCESSION   NZ_QYBS00000000
VERSION     NZ_QYBS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09101767
            Assembly: GCF_012642005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans
  ORGANISM  Streptococcus mutans
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2073407)
  AUTHORS   Momeni,S.S., Beno,S.M., Baker,J.L., Edlund,A., Ghazal,T.,
            Childers,N.K. and Wu,H.
  TITLE     Caries-Associated Biosynthetic Gene Clusters in Streptococcus
            mutans
  JOURNAL   J Dent Res 99 (8), 969-976 (2020)
   PUBMED   32298190
REFERENCE   2  (bases 1 to 2073407)
  AUTHORS   Momeni,S. and Childers,N.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-DEC-2018) Pediatric Dentistry, University of Alabama
            at Birmingham, LHRB 238, 701 19th Street South, Birmingham, AL
            35294-0007, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QYBS00000000.1.
            The Streptococcus mutans whole genome shotgun (WGS) project has the
            project accession NZ_QYBS00000000.  This version of the project
            (01) has the accession number NZ_QYBS01000000, and consists of
            sequences QYBS01000001-QYBS01000015.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: SEP-2018
            Assembly Method        :: SPAdes v. 3.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30.660714285714285x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_012642005.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:58:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,983
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,861
            CDSs (with protein)               :: 1,861
            Genes (RNA)                       :: 51
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 39 of 71
            Pseudo Genes (incomplete)         :: 39 of 71
            Pseudo Genes (internal stop)      :: 14 of 71
            Pseudo Genes (multiple problems)  :: 17 of 71
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2073407
                     /organism="Streptococcus mutans"
                     /mol_type="genomic DNA"
                     /strain="UAB-28"
                     /serotype="C"
                     /isolation_source="plaque"
                     /host="Homo sapiens"
                     /db_xref="taxon:1309"
                     /geo_loc_name="USA: Alabama"
                     /lat_lon="32.44 N 87.51 W"
                     /collection_date="2009-10-13"
                     /collected_by="Noel Childers-UAB"
                     /genotype="G26"
WGS         QYBS01000001-QYBS01000015
WGS_SCAFLD  NZ_QYBS01000001-NZ_QYBS01000015
//
LOCUS       NZ_JACSUG010000000   1842362 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptococcus thermophilus strain S50, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JACSUG000000000
VERSION     NZ_JACSUG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15923553
            Assembly: GCF_017367015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus thermophilus
  ORGANISM  Streptococcus thermophilus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1842362)
  AUTHORS   Somerville,V.
  TITLE     Streptococcus thermophilus and Lactobacillus delbrueckii from
            RMK202
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1842362)
  AUTHORS   Somerville,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2020) Fundamental Microbiology, University of
            Lausanne, Biophore, Lausanne, Switzerland 1015, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JACSUG000000000.1.
            The Streptococcus thermophilus whole genome shotgun (WGS) project
            has the project accession NZ_JACSUG000000000.  This version of the
            project (01) has the accession number NZ_JACSUG010000000, and
            consists of sequences JACSUG010000001-JACSUG010000043.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2020
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 300x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017367015.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:16:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,925
            CDSs (total)                      :: 1,878
            Genes (coding)                    :: 1,634
            CDSs (with protein)               :: 1,634
            Genes (RNA)                       :: 47
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 244
            CDSs (without protein)            :: 244
            Pseudo Genes (ambiguous residues) :: 0 of 244
            Pseudo Genes (frameshifted)       :: 159 of 244
            Pseudo Genes (incomplete)         :: 96 of 244
            Pseudo Genes (internal stop)      :: 99 of 244
            Pseudo Genes (multiple problems)  :: 91 of 244
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1842362
                     /organism="Streptococcus thermophilus"
                     /mol_type="genomic DNA"
                     /strain="S50"
                     /isolation_source="Cheese starter culture"
                     /db_xref="taxon:1308"
                     /geo_loc_name="Switzerland"
                     /collection_date="2019"
WGS         JACSUG010000001-JACSUG010000043
WGS_SCAFLD  NZ_JACSUG010000001-NZ_JACSUG010000043
//
LOCUS       NZ_JAKTCA010000000   2063418 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptococcus suis strain LSSP142, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAKTCA000000000
VERSION     NZ_JAKTCA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN26111045
            Assembly: GCF_022426725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2063418)
  AUTHORS   Li,J.
  TITLE     The Streptococcus suis genomes of diseased pigs in China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2063418)
  AUTHORS   Li,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2022) College of Food Sciences & Technology,
            Huazhong Agricultural University, No. 1, Shizishan Street, Wuhan,
            Hubei 430070, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKTCA000000000.1.
            The Streptococcus suis whole genome shotgun (WGS) project has the
            project accession NZ_JAKTCA000000000.  This version of the project
            (01) has the accession number NZ_JAKTCA010000000, and consists of
            sequences JAKTCA010000001-JAKTCA010000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 500x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022426725.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:11:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,038
            CDSs (total)                      :: 1,994
            Genes (coding)                    :: 1,938
            CDSs (with protein)               :: 1,938
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 28 of 56
            Pseudo Genes (incomplete)         :: 28 of 56
            Pseudo Genes (internal stop)      :: 15 of 56
            Pseudo Genes (multiple problems)  :: 13 of 56
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063418
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /strain="LSSP142"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /geo_loc_name="China: Guangdong"
                     /lat_lon="39.56 N 116.20 E"
                     /collection_date="2017-06"
                     /collected_by="Huazhong Agricultural University"
WGS         JAKTCA010000001-JAKTCA010000026
WGS_SCAFLD  NZ_JAKTCA010000001-NZ_JAKTCA010000026
//
LOCUS       NZ_JAKTBS010000000   2062393 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptococcus suis strain LSSP133, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAKTBS000000000
VERSION     NZ_JAKTBS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN26111037
            Assembly: GCF_022427125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2062393)
  AUTHORS   Li,J.
  TITLE     The Streptococcus suis genomes of diseased pigs in China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2062393)
  AUTHORS   Li,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2022) College of Food Sciences & Technology,
            Huazhong Agricultural University, No. 1, Shizishan Street, Wuhan,
            Hubei 430070, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKTBS000000000.1.
            The Streptococcus suis whole genome shotgun (WGS) project has the
            project accession NZ_JAKTBS000000000.  This version of the project
            (01) has the accession number NZ_JAKTBS010000000, and consists of
            sequences JAKTBS010000001-JAKTBS010000027.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 500x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022427125.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:12:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 1,992
            Genes (coding)                    :: 1,935
            CDSs (with protein)               :: 1,935
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 29 of 57
            Pseudo Genes (incomplete)         :: 28 of 57
            Pseudo Genes (internal stop)      :: 15 of 57
            Pseudo Genes (multiple problems)  :: 13 of 57
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062393
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /strain="LSSP133"
                     /isolation_source="brain"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /geo_loc_name="China: Guangdong"
                     /lat_lon="39.56 N 116.20 E"
                     /collection_date="2017-03"
                     /collected_by="Huazhong Agricultural University"
WGS         JAKTBS010000001-JAKTBS010000027
WGS_SCAFLD  NZ_JAKTBS010000001-NZ_JAKTBS010000027
//
LOCUS       NZ_JAKTBZ010000000   2062264 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptococcus suis strain LSSP141, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAKTBZ000000000
VERSION     NZ_JAKTBZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN26111044
            Assembly: GCF_022426785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2062264)
  AUTHORS   Li,J.
  TITLE     The Streptococcus suis genomes of diseased pigs in China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2062264)
  AUTHORS   Li,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2022) College of Food Sciences & Technology,
            Huazhong Agricultural University, No. 1, Shizishan Street, Wuhan,
            Hubei 430070, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKTBZ000000000.1.
            The Streptococcus suis whole genome shotgun (WGS) project has the
            project accession NZ_JAKTBZ000000000.  This version of the project
            (01) has the accession number NZ_JAKTBZ010000000, and consists of
            sequences JAKTBZ010000001-JAKTBZ010000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 500x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022426785.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:11:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,038
            CDSs (total)                      :: 1,994
            Genes (coding)                    :: 1,937
            CDSs (with protein)               :: 1,937
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 29 of 57
            Pseudo Genes (incomplete)         :: 28 of 57
            Pseudo Genes (internal stop)      :: 14 of 57
            Pseudo Genes (multiple problems)  :: 12 of 57
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062264
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /strain="LSSP141"
                     /isolation_source="joint"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /geo_loc_name="China: Hubei"
                     /lat_lon="39.56 N 116.20 E"
                     /collection_date="2017-06"
                     /collected_by="Huazhong Agricultural University"
WGS         JAKTBZ010000001-JAKTBZ010000026
WGS_SCAFLD  NZ_JAKTBZ010000001-NZ_JAKTBZ010000026
//
LOCUS       NZ_JBBIGN010000000   2038549 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptococcus pluranimalium strain Bov5, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBIGN000000000
VERSION     NZ_JBBIGN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40550590
            Assembly: GCF_038404965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pluranimalium
  ORGANISM  Streptococcus pluranimalium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2038549)
  AUTHORS   Fan,W., Zhang,Y., Sun,Y., Cao,X., Gao,Z. and Gu,L.
  TITLE     Genomic characterization of Streptococcus pluranimalium isolated
            from bovine respiratory tract
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2038549)
  AUTHORS   Fan,W., Zhang,Y., Sun,Y., Cao,X., Gao,Z. and Gu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2024) College of Animal Science and Technology,
            Shihezi University, North 4th Road, Shihezi, Xinjiang 832003, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBIGN000000000.1.
            The Streptococcus pluranimalium whole genome shotgun (WGS) project
            has the project accession NZ_JBBIGN000000000.  This version of the
            project (01) has the accession number NZ_JBBIGN010000000, and
            consists of sequences JBBIGN010000001-JBBIGN010000034.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2023
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 460.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038404965.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:46:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,042
            CDSs (total)                      :: 1,971
            Genes (coding)                    :: 1,894
            CDSs (with protein)               :: 1,894
            Genes (RNA)                       :: 71
            rRNAs                             :: 3, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 2, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 26 of 77
            Pseudo Genes (incomplete)         :: 46 of 77
            Pseudo Genes (internal stop)      :: 21 of 77
            Pseudo Genes (multiple problems)  :: 16 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2038549
                     /organism="Streptococcus pluranimalium"
                     /mol_type="genomic DNA"
                     /strain="Bov5"
                     /host="bovine"
                     /db_xref="taxon:82348"
                     /geo_loc_name="China: Xinjiang"
                     /collection_date="2023-07"
WGS         JBBIGN010000001-JBBIGN010000034
WGS_SCAFLD  NZ_JBBIGN010000001-NZ_JBBIGN010000034
//
LOCUS       NZ_JBNCLP010000000   8417049 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces albogriseolus strain DT102, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNCLP000000000
VERSION     NZ_JBNCLP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN46229742
            Assembly: GCF_049844735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces albogriseolus
  ORGANISM  Streptomyces albogriseolus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces; Streptomyces
            albogriseolus group.
REFERENCE   1  (bases 1 to 8417049)
  AUTHORS   Tellatin,D. and Rigali,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2025) InBioS - CIP, University of Liege, Allee du
            Six Aout, 13, Liege 4000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCLP000000000.1.
            The Streptomyces albogriseolus whole genome shotgun (WGS) project
            has the project accession NZ_JBNCLP000000000.  This version of the
            project (01) has the accession number NZ_JBNCLP010000000, and
            consists of sequences JBNCLP010000001-JBNCLP010000064.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 54x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049844735.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:38:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,779
            CDSs (total)                      :: 7,692
            Genes (coding)                    :: 7,542
            CDSs (with protein)               :: 7,542
            Genes (RNA)                       :: 87
            rRNAs                             :: 6, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 5, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 151
            CDSs (without protein)            :: 150
            Pseudo Genes (ambiguous residues) :: 0 of 151
            Pseudo Genes (frameshifted)       :: 47 of 151
            Pseudo Genes (incomplete)         :: 121 of 151
            Pseudo Genes (internal stop)      :: 16 of 151
            Pseudo Genes (multiple problems)  :: 30 of 151
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8417049
                     /organism="Streptomyces albogriseolus"
                     /mol_type="genomic DNA"
                     /strain="DT102"
                     /isolation_source="Wax beehive"
                     /db_xref="taxon:1887"
                     /geo_loc_name="Belgium: Comblain-au-Pont"
                     /collection_date="2021-05-14"
WGS         JBNCLP010000001-JBNCLP010000064
WGS_SCAFLD  NZ_JBNCLP010000001-NZ_JBNCLP010000064
//
LOCUS       NZ_JBNCNX010000000   8027333 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces albogriseolus strain DT151, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNCNX000000000
VERSION     NZ_JBNCNX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47951513
            Assembly: GCF_049847205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces albogriseolus
  ORGANISM  Streptomyces albogriseolus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces; Streptomyces
            albogriseolus group.
REFERENCE   1  (bases 1 to 8027333)
  AUTHORS   Tellatin,D. and Rigali,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2025) InBioS - CIP, University of Liege, Allee du
            Six Aout, 13, Liege 4000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCNX000000000.1.
            The Streptomyces albogriseolus whole genome shotgun (WGS) project
            has the project accession NZ_JBNCNX000000000.  This version of the
            project (01) has the accession number NZ_JBNCNX010000000, and
            consists of sequences JBNCNX010000001-JBNCNX010000043.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 52x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049847205.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,370
            CDSs (total)                      :: 7,284
            Genes (coding)                    :: 7,163
            CDSs (with protein)               :: 7,163
            Genes (RNA)                       :: 86
            rRNAs                             :: 6, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 5, 2, 5 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 122
            CDSs (without protein)            :: 121
            Pseudo Genes (ambiguous residues) :: 0 of 122
            Pseudo Genes (frameshifted)       :: 46 of 122
            Pseudo Genes (incomplete)         :: 95 of 122
            Pseudo Genes (internal stop)      :: 6 of 122
            Pseudo Genes (multiple problems)  :: 24 of 122
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8027333
                     /organism="Streptomyces albogriseolus"
                     /mol_type="genomic DNA"
                     /strain="DT151"
                     /isolation_source="Propolis Beehive"
                     /db_xref="taxon:1887"
                     /geo_loc_name="Belgium: Comblain-au-Pont"
                     /collection_date="2021-05-14"
WGS         JBNCNX010000001-JBNCNX010000043
WGS_SCAFLD  NZ_JBNCNX010000001-NZ_JBNCNX010000043
//
LOCUS       NZ_JBNCNW010000000   7950904 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces albogriseolus strain DT166, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNCNW000000000
VERSION     NZ_JBNCNW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47951514
            Assembly: GCF_049847185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces albogriseolus
  ORGANISM  Streptomyces albogriseolus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces; Streptomyces
            albogriseolus group.
REFERENCE   1  (bases 1 to 7950904)
  AUTHORS   Tellatin,D. and Rigali,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2025) InBioS - CIP, University of Liege, Allee du
            Six Aout, 13, Liege 4000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCNW000000000.1.
            The Streptomyces albogriseolus whole genome shotgun (WGS) project
            has the project accession NZ_JBNCNW000000000.  This version of the
            project (01) has the accession number NZ_JBNCNW010000000, and
            consists of sequences JBNCNW010000001-JBNCNW010000061.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 56x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049847185.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:54:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,228
            CDSs (total)                      :: 7,148
            Genes (coding)                    :: 7,017
            CDSs (with protein)               :: 7,017
            Genes (RNA)                       :: 80
            rRNAs                             :: 6, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 5, 1 (5S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 132
            CDSs (without protein)            :: 131
            Pseudo Genes (ambiguous residues) :: 0 of 132
            Pseudo Genes (frameshifted)       :: 48 of 132
            Pseudo Genes (incomplete)         :: 105 of 132
            Pseudo Genes (internal stop)      :: 14 of 132
            Pseudo Genes (multiple problems)  :: 31 of 132
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7950904
                     /organism="Streptomyces albogriseolus"
                     /mol_type="genomic DNA"
                     /strain="DT166"
                     /isolation_source="Propolis Beehive"
                     /db_xref="taxon:1887"
                     /geo_loc_name="Belgium: Comblain-au-Pont"
                     /collection_date="2021-05-14"
WGS         JBNCNW010000001-JBNCNW010000061
WGS_SCAFLD  NZ_JBNCNW010000001-NZ_JBNCNW010000061
//
LOCUS       NZ_JBNCLT010000000   7032416 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces albidoflavus strain DT179, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNCLT000000000
VERSION     NZ_JBNCLT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN46229737
            Assembly: GCF_049844815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces albidoflavus
  ORGANISM  Streptomyces albidoflavus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces; Streptomyces
            albidoflavus group.
REFERENCE   1  (bases 1 to 7032416)
  AUTHORS   Tellatin,D. and Rigali,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2025) InBioS - CIP, University of Liege, Allee du
            Six Aout, 13, Liege 4000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCLT000000000.1.
            The Streptomyces albidoflavus whole genome shotgun (WGS) project
            has the project accession NZ_JBNCLT000000000.  This version of the
            project (01) has the accession number NZ_JBNCLT010000000, and
            consists of sequences JBNCLT010000001-JBNCLT010000102.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 53x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049844815.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:58:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,169
            CDSs (total)                      :: 6,088
            Genes (coding)                    :: 6,017
            CDSs (with protein)               :: 6,017
            Genes (RNA)                       :: 81
            rRNAs                             :: 4, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 4, 2 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 28 of 71
            Pseudo Genes (incomplete)         :: 44 of 71
            Pseudo Genes (internal stop)      :: 8 of 71
            Pseudo Genes (multiple problems)  :: 7 of 71
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7032416
                     /organism="Streptomyces albidoflavus"
                     /mol_type="genomic DNA"
                     /strain="DT179"
                     /isolation_source="Propolis beehive"
                     /db_xref="taxon:1886"
                     /geo_loc_name="Belgium: Comblain-au-Pont"
                     /collection_date="2021-05-14"
WGS         JBNCLT010000001-JBNCLT010000102
WGS_SCAFLD  NZ_JBNCLT010000001-NZ_JBNCLT010000102
//
LOCUS       NZ_JBNCNQ010000000   7028411 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces albidoflavus strain DT221, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNCNQ000000000
VERSION     NZ_JBNCNQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47951520
            Assembly: GCF_049847085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces albidoflavus
  ORGANISM  Streptomyces albidoflavus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces; Streptomyces
            albidoflavus group.
REFERENCE   1  (bases 1 to 7028411)
  AUTHORS   Tellatin,D. and Rigali,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2025) InBioS - CIP, University of Liege, Allee du
            Six Aout, 13, Liege 4000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCNQ000000000.1.
            The Streptomyces albidoflavus whole genome shotgun (WGS) project
            has the project accession NZ_JBNCNQ000000000.  This version of the
            project (01) has the accession number NZ_JBNCNQ010000000, and
            consists of sequences JBNCNQ010000001-JBNCNQ010000087.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 53x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049847085.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 18:14:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,138
            CDSs (total)                      :: 6,062
            Genes (coding)                    :: 5,986
            CDSs (with protein)               :: 5,986
            Genes (RNA)                       :: 76
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 1 (5S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 30 of 76
            Pseudo Genes (incomplete)         :: 51 of 76
            Pseudo Genes (internal stop)      :: 6 of 76
            Pseudo Genes (multiple problems)  :: 9 of 76
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7028411
                     /organism="Streptomyces albidoflavus"
                     /mol_type="genomic DNA"
                     /strain="DT221"
                     /isolation_source="Propolis Beehive"
                     /db_xref="taxon:1886"
                     /geo_loc_name="Belgium: Comblain-au-Pont"
                     /collection_date="2021-05-14"
WGS         JBNCNQ010000001-JBNCNQ010000087
WGS_SCAFLD  NZ_JBNCNQ010000001-NZ_JBNCNQ010000087
//
LOCUS       NZ_JBNDMX010000000   6958621 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces albidoflavus strain MR-37, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNDMX000000000
VERSION     NZ_JBNDMX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47932091
            Assembly: GCF_049856095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces albidoflavus
  ORGANISM  Streptomyces albidoflavus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces; Streptomyces
            albidoflavus group.
REFERENCE   1  (bases 1 to 6958621)
  AUTHORS   De La Vega,E.
  TITLE     Functional genomics and phenotypic characterization of Streptomyces
            spp. associated with native plants in the traditional Mexican milpa
            agroecosystem
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6958621)
  AUTHORS   De La Vega,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2025) Microbiology, Instituto Politecnico
            Nacional, Manuel Carpio, CDMX 11350, Mexico
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNDMX000000000.1.
            The Streptomyces albidoflavus whole genome shotgun (WGS) project
            has the project accession NZ_JBNDMX000000000.  This version of the
            project (01) has the accession number NZ_JBNDMX010000000, and
            consists of sequences JBNDMX010000001-JBNDMX010000067.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. De novo
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049856095.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 18:12:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,087
            CDSs (total)                      :: 6,010
            Genes (coding)                    :: 5,952
            CDSs (with protein)               :: 5,952
            Genes (RNA)                       :: 77
            rRNAs                             :: 4, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 1 (5S, 16S)
            tRNAs                             :: 67
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 58
            CDSs (without protein)            :: 58
            Pseudo Genes (ambiguous residues) :: 0 of 58
            Pseudo Genes (frameshifted)       :: 19 of 58
            Pseudo Genes (incomplete)         :: 37 of 58
            Pseudo Genes (internal stop)      :: 5 of 58
            Pseudo Genes (multiple problems)  :: 3 of 58
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6958621
                     /organism="Streptomyces albidoflavus"
                     /mol_type="genomic DNA"
                     /strain="MR-37"
                     /isolation_source="rhizosphere"
                     /host="Zea mays"
                     /db_xref="taxon:1886"
                     /geo_loc_name="Mexico"
                     /collection_date="2021-11-24"
WGS         JBNDMX010000001-JBNDMX010000067
WGS_SCAFLD  NZ_JBNDMX010000001-NZ_JBNDMX010000067
//
LOCUS       NZ_JBXGHY010000000   1917618 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptococcus pluranimalium strain SL30, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGHY000000000
VERSION     NZ_JBXGHY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772377
            Assembly: GCF_056855595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pluranimalium
  ORGANISM  Streptococcus pluranimalium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1917618)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGHY000000000.1.
            The Streptococcus pluranimalium whole genome shotgun (WGS) project
            has the project accession NZ_JBXGHY000000000.  This version of the
            project (01) has the accession number NZ_JBXGHY010000000, and
            consists of sequences JBXGHY010000001-JBXGHY010000017.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855595.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,938
            CDSs (total)                      :: 1,904
            Genes (coding)                    :: 1,801
            CDSs (with protein)               :: 1,801
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 27
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 103
            CDSs (without protein)            :: 103
            Pseudo Genes (ambiguous residues) :: 0 of 103
            Pseudo Genes (frameshifted)       :: 44 of 103
            Pseudo Genes (incomplete)         :: 49 of 103
            Pseudo Genes (internal stop)      :: 50 of 103
            Pseudo Genes (multiple problems)  :: 33 of 103
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1917618
                     /organism="Streptococcus pluranimalium"
                     /mol_type="genomic DNA"
                     /strain="SL30"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:82348"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.85 W"
                     /collection_date="2023-08-17"
WGS         JBXGHY010000001-JBXGHY010000017
WGS_SCAFLD  NZ_JBXGHY010000001-NZ_JBXGHY010000017
//
LOCUS       NZ_CBBSSZ010000000   1766167 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Synechococcus sp. isolate
            PELAGICS-MAG-m2-bin100921-AMADE-SM-01apr22., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBBSSZ000000000
VERSION     NZ_CBBSSZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117451217
            Assembly: GCF_964963305.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Synechococcus sp. (freshwater metagenome)
  ORGANISM  Synechococcus sp.
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Synechococcaceae; Synechococcus.
REFERENCE   1  (bases 1 to 1766167)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-JAN-2025) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBBSSZ000000000.1.
            The Synechococcus sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBBSSZ000000000.  This version of the project
            (01) has the accession number NZ_CBBSSZ010000000, and consists of
            sequences CBBSSZ010000001-CBBSSZ010000152.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964963305.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 01:07:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,032
            CDSs (total)                      :: 1,989
            Genes (coding)                    :: 1,943
            CDSs (with protein)               :: 1,943
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 2 of 46
            Pseudo Genes (incomplete)         :: 44 of 46
            Pseudo Genes (internal stop)      :: 1 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1766167
                     /organism="Synechococcus sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-m2-bin100921-AMADE-SM-01apr22."
                     /isolation_source="Amadorio reservoir"
                     /db_xref="taxon:1131"
                     /environmental_sample
                     /geo_loc_name="Spain"
                     /collection_date="2022-04-01"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBBSSZ010000001-CBBSSZ010000152
WGS_SCAFLD  NZ_CBBSSZ010000001-NZ_CBBSSZ010000152
//
LOCUS       NZ_ATCF01000000      2949098 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Sutterella wadsworthensis HGA0223, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ATCF00000000
VERSION     NZ_ATCF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02596980
            Assembly: GCF_000411515.1
KEYWORDS    WGS; HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Sutterella wadsworthensis HGA0223
  ORGANISM  Sutterella wadsworthensis HGA0223
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Sutterellaceae; Sutterella.
REFERENCE   1  (bases 1 to 2949098)
  AUTHORS   Earl,A., Ward,D., Feldgarden,M., Gevers,D., Schmidt,T.M., Dover,J.,
            Dai,D., Walker,B., Young,S., Zeng,Q., Gargeya,S., Fitzgerald,M.,
            Haas,B., Abouelleil,A., Allen,A.W., Alvarado,L., Arachchi,H.M.,
            Berlin,A.M., Chapman,S.B., Gainer-Dewar,J., Goldberg,J., Griggs,A.,
            Gujja,S., Hansen,M., Howarth,C., Imamovic,A., Ireland,A.,
            Larimer,J., McCowan,C., Murphy,C., Pearson,M., Poon,T.W.,
            Priest,M., Roberts,A., Saif,S., Shea,T., Sisk,P., Sykes,S.,
            Wortman,J., Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genomics Platform
  TITLE     The Genome Sequence of Sutterella wadsworthensis HGA0223
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2949098)
  AUTHORS   Earl,A., Ward,D., Feldgarden,M., Gevers,D., Schmidt,T.M., Dover,J.,
            Dai,D., Walker,B., Young,S., Zeng,Q., Gargeya,S., Fitzgerald,M.,
            Haas,B., Abouelleil,A., Allen,A.W., Alvarado,L., Arachchi,H.M.,
            Berlin,A.M., Chapman,S.B., Gainer-Dewar,J., Goldberg,J., Griggs,A.,
            Gujja,S., Hansen,M., Howarth,C., Imamovic,A., Ireland,A.,
            Larimer,J., McCowan,C., Murphy,C., Pearson,M., Poon,T.W.,
            Priest,M., Roberts,A., Saif,S., Shea,T., Sisk,P., Sykes,S.,
            Wortman,J., Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genomics Platform
  TITLE     Direct Submission
  JOURNAL   Submitted (25-APR-2013) Broad Institute of MIT and Harvard, 7
            Cambridge Center, Cambridge, MA 02142, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ATCF00000000.1.
            The Sutterella wadsworthensis HGA0223 whole genome shotgun (WGS)
            project has the project accession NZ_ATCF00000000.  This version of
            the project (01) has the accession number NZ_ATCF01000000, and
            consists of sequences ATCF01000001-ATCF01000039.
            This is a reference genome for the Human Microbiome Project. This
            project is co-owned with the Human Microbiome Project DACC.
            Source DNA provided by Thomas M. Schmidt, John Dover, and Dongjuan
            Dai. (University of Michigan Medical School, USA).
            Bacteria provided by Thomas M. Schmidt, John Dover, and Dongjuan
            Dai. (University of Michigan Medical School, USA).
            Please be aware that the annotation is done automatically with
            little or no manual curation.
            Gene Calling Method: Prodigal.
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: High-Quality Draft
            Current Finishing Status :: High-Quality Draft
            Assembly Method          :: allpaths v. R42768
            Assembly Name            :: Sutt_wads_HGA0223_V1
            Genome Coverage          :: 275.0x
            Sequencing Technology    :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000411515.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 09:58:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,449
            CDSs (total)                      :: 2,371
            Genes (coding)                    :: 2,335
            CDSs (with protein)               :: 2,335
            Genes (RNA)                       :: 78
            rRNAs                             :: 4, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 3, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 65
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 5 of 36
            Pseudo Genes (incomplete)         :: 29 of 36
            Pseudo Genes (internal stop)      :: 5 of 36
            Pseudo Genes (multiple problems)  :: 2 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2949098
                     /organism="Sutterella wadsworthensis HGA0223"
                     /mol_type="genomic DNA"
                     /strain="HGA0223"
                     /db_xref="HMP:1476"
                     /db_xref="taxon:1203554"
WGS         ATCF01000001-ATCF01000039
WGS_SCAFLD  NZ_KE150480-NZ_KE150482
//
LOCUS       NZ_ABID01000000      4105524 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Sulfitobacter indolifex HEL-45, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ABID00000000
VERSION     NZ_ABID00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02436097
            Assembly: GCF_000172095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sulfitobacter indolifex HEL-45
  ORGANISM  Sulfitobacter indolifex HEL-45
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Sulfitobacter.
REFERENCE   1  (bases 1 to 4105524)
  AUTHORS   Wagner-Dobler,I., Ferriera,S., Johnson,J., Kravitz,S., Beeson,K.,
            Sutton,G., Rogers,Y.-H., Friedman,R., Frazier,M. and Venter,J.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2007) J Craig Venter Institute, 9704 Medical
            Center Drive, Rockville, MD 20850, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ABID00000000.1.
            The Sulfitobacter indolifex HEL-45 whole genome shotgun (WGS)
            project has the project accession NZ_ABID00000000.  This version of
            the project (01) has the accession number NZ_ABID01000000, and
            consists of sequences ABID01000001-ABID01000105.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group.  Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000172095.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:19:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,094
            CDSs (total)                      :: 4,034
            Genes (coding)                    :: 3,951
            CDSs (with protein)               :: 3,951
            Genes (RNA)                       :: 60
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 83
            CDSs (without protein)            :: 83
            Pseudo Genes (ambiguous residues) :: 0 of 83
            Pseudo Genes (frameshifted)       :: 36 of 83
            Pseudo Genes (incomplete)         :: 57 of 83
            Pseudo Genes (internal stop)      :: 18 of 83
            Pseudo Genes (multiple problems)  :: 24 of 83
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4105524
                     /organism="Sulfitobacter indolifex HEL-45"
                     /mol_type="genomic DNA"
                     /strain="HEL-45"
                     /type_material="type strain of Oceanibulbus indolifex"
                     /db_xref="taxon:391624"
WGS         ABID01000001-ABID01000105
WGS_SCAFLD  NZ_ABID01000001-NZ_ABID01000105
//
LOCUS       NZ_FNBP01000000      3935853 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Sulfitobacter delicatus strain DSM 16477, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNBP00000000
VERSION     NZ_FNBP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04489759
            Assembly: GCF_900102535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sulfitobacter delicatus
  ORGANISM  Sulfitobacter delicatus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Sulfitobacter.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNBP00000000.1.
            The Sulfitobacter delicatus whole genome shotgun (WGS) project has
            the project accession NZ_FNBP00000000.  This version of the project
            (01) has the accession number NZ_FNBP01000000, and consists of
            sequences FNBP01000001-FNBP01000034.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900102535.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:36:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,914
            CDSs (total)                      :: 3,861
            Genes (coding)                    :: 3,818
            CDSs (with protein)               :: 3,818
            Genes (RNA)                       :: 53
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 7 of 43
            Pseudo Genes (incomplete)         :: 36 of 43
            Pseudo Genes (internal stop)      :: 7 of 43
            Pseudo Genes (multiple problems)  :: 7 of 43
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3935853
                     /organism="Sulfitobacter delicatus"
                     /mol_type="genomic DNA"
                     /strain="DSM 16477"
                     /type_material="type strain of Sulfitobacter delicatus"
                     /db_xref="taxon:218672"
WGS         FNBP01000001-FNBP01000034
WGS_SCAFLD  NZ_FNBP01000001-NZ_FNBP01000034
//
LOCUS       NZ_JNYR01000000      9589920 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces rimosus subsp. rimosus strain NRRL ISP-5260, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JNYR00000000
VERSION     NZ_JNYR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02645319
            Assembly: GCF_000717285.1
KEYWORDS    WGS; HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Streptomyces rimosus subsp. rimosus
  ORGANISM  Streptomyces rimosus subsp. rimosus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 9589920)
  AUTHORS   Doroghazi,J.R., Albright,J.C., Goering,A.W., Ju,K.-S., Haines,R.R.,
            Tchalukov,K.A., Labeda,D.P., Kelleher,N.L. and Metcalf,W.W.
  TITLE     A Roadmap for Natural Product Discovery Based on Large-Scale
            Genomics and Metabolomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 9589920)
  AUTHORS   Doroghazi,J.R., Ju,K.-S. and Metcalf,W.W.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAY-2014) Institute for Genomic Biology, University
            of Illinois at Urbana-Champaign, 3109 IGB, MC-195, Urbana, IL
            61801, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JNYR00000000.1.
            The Streptomyces rimosus subsp. rimosus whole genome shotgun (WGS)
            project has the project accession NZ_JNYR00000000.  This version of
            the project (01) has the accession number NZ_JNYR01000000, and
            consists of sequences JNYR01000001-JNYR01000129.
            Bacteria available from NRRL.
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: High-Quality Draft
            Current Finishing Status :: High-Quality Draft
            Assembly Method          :: IDBA UD v. 1.0.9
            Genome Coverage          :: 265x
            Sequencing Technology    :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000717285.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:56:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,553
            CDSs (total)                      :: 8,472
            Genes (coding)                    :: 8,253
            CDSs (with protein)               :: 8,253
            Genes (RNA)                       :: 81
            rRNAs                             :: 6, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 3 (5S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 219
            CDSs (without protein)            :: 219
            Pseudo Genes (ambiguous residues) :: 0 of 219
            Pseudo Genes (frameshifted)       :: 66 of 219
            Pseudo Genes (incomplete)         :: 178 of 219
            Pseudo Genes (internal stop)      :: 15 of 219
            Pseudo Genes (multiple problems)  :: 36 of 219
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9589920
                     /organism="Streptomyces rimosus subsp. rimosus"
                     /mol_type="genomic DNA"
                     /strain="NRRL ISP-5260"
                     /isolation_source="soil"
                     /sub_species="rimosus"
                     /culture_collection="NRRL:ISP-5260"
                     /type_material="type strain of Streptomyces rimosus"
                     /db_xref="taxon:132474"
                     /collection_date="2010"
WGS         JNYR01000001-JNYR01000129
WGS_SCAFLD  NZ_JNYR01000001-NZ_JNYR01000129
//
LOCUS       NZ_AUBE01000000      7070141 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces flavidovirens DSM 40150, whole genome shotgun
            sequencing project.
ACCESSION   NZ_AUBE00000000
VERSION     NZ_AUBE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02440879
            Assembly: GCF_000429085.1
KEYWORDS    WGS; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Streptomyces flavidovirens DSM 40150
  ORGANISM  Streptomyces flavidovirens DSM 40150
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 7070141)
  AUTHORS   Kyrpides,N., Huntemann,M., Han,J., Chen,A., Mavromatis,K.,
            Markowitz,V., Palaniappan,K., Ivanova,N., Schaumberg,A., Pati,A.,
            Liolios,K., Nordberg,H.P., Cantor,M.N., Hua,S.X. and Woyke,T.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUL-2013) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AUBE00000000.1.
            The Streptomyces flavidovirens DSM 40150 whole genome shotgun (WGS)
            project has the project accession NZ_AUBE00000000.  This version of
            the project (01) has the accession number NZ_AUBE01000000, and
            consists of sequences AUBE01000001-AUBE01000051.
            URL -- http://www.jgi.doe.gov
            JGI Project ID: 1011953
            Source DNA and organism available from Hans-Peter Klenk at the
            German Collection of Microorganisms and Cell Cultures (DSMZ)
            (hans-peter.klenk@dsmz.de)
            Contacts: Nikos   Kyrpides (nckyrpides@lbl.gov)
                      Tanja Woyke (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI
            Annotation by JGI
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376)
            Full annotations are available from IMG.
            
            ##MIGS-Data-START##
            environment        :: Soil
            investigation_type :: bacteria_archaea
            project_name       :: Streptomyces flavidovirens DSM 40150
            sequencing_meth    :: WGS
            ref_biomaterial    :: DSM 40150, ATCC 19900
            finishing_strategy :: Level 1: Standard Draft
            GOLD Stamp ID      :: Gi11969
            Type Strain        :: Yes
            Funding Program    :: DOE-CSP 2012
            Isolation Site     :: Soil
            Sporulation        :: Sporulating
            Gram Staining      :: Gram+
            ##MIGS-Data-END##
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: Unknown program v. before 2013-03-07
            Genome Coverage          :: Unknown
            Sequencing Technology    :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000429085.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:52:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,537
            CDSs (total)                      :: 6,463
            Genes (coding)                    :: 6,226
            CDSs (with protein)               :: 6,226
            Genes (RNA)                       :: 74
            rRNAs                             :: 6, 1, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 1, 6 (16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 237
            CDSs (without protein)            :: 237
            Pseudo Genes (ambiguous residues) :: 0 of 237
            Pseudo Genes (frameshifted)       :: 107 of 237
            Pseudo Genes (incomplete)         :: 172 of 237
            Pseudo Genes (internal stop)      :: 19 of 237
            Pseudo Genes (multiple problems)  :: 55 of 237
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7070141
                     /organism="Streptomyces flavidovirens DSM 40150"
                     /mol_type="genomic DNA"
                     /strain="DSM 40150"
                     /culture_collection="DSM:40150"
                     /type_material="type strain of Streptomyces flavidovirens"
                     /db_xref="taxon:1123319"
WGS         AUBE01000001-AUBE01000051
WGS_SCAFLD  NZ_AUBE01000001-NZ_AUBE01000008
WGS_SCAFLD  NZ_AUBE01000011-NZ_AUBE01000017
WGS_SCAFLD  NZ_AUBE01000020-NZ_AUBE01000051
WGS_SCAFLD  NZ_KE386846-NZ_KE386847
//
LOCUS       NZ_FQXA01000000      4308853 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stutzerimonas xanthomarina DSM 18231, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FQXA00000000
VERSION     NZ_FQXA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02744645
            Assembly: GCF_900129835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stutzerimonas xanthomarina DSM 18231
  ORGANISM  Stutzerimonas xanthomarina DSM 18231
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Stutzerimonas.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FQXA00000000.1.
            The Stutzerimonas xanthomarina DSM 18231 whole genome shotgun (WGS)
            project has the project accession NZ_FQXA00000000.  This version of
            the project (01) has the accession number NZ_FQXA01000000, and
            consists of sequences FQXA01000001-FQXA01000017.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900129835.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:55:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,007
            CDSs (total)                      :: 3,944
            Genes (coding)                    :: 3,880
            CDSs (with protein)               :: 3,880
            Genes (RNA)                       :: 63
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 43 of 64
            Pseudo Genes (internal stop)      :: 5 of 64
            Pseudo Genes (multiple problems)  :: 11 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4308853
                     /organism="Stutzerimonas xanthomarina DSM 18231"
                     /mol_type="genomic DNA"
                     /strain="DSM 18231"
                     /type_material="type strain of Pseudomonas xanthomarina"
                     /db_xref="taxon:1403346"
                     /geo_loc_name="Russia:Sea of Japan, Russia"
WGS         FQXA01000001-FQXA01000017
WGS_SCAFLD  NZ_FQXA01000001-NZ_FQXA01000017
//
LOCUS       NZ_JNYL01000000      8988808 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces monomycini strain NRRL B-24309, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JNYL00000000
VERSION     NZ_JNYL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02645312
            Assembly: GCF_000715845.1
KEYWORDS    WGS; HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Streptomyces monomycini
  ORGANISM  Streptomyces monomycini
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 8988808)
  AUTHORS   Doroghazi,J.R., Albright,J.C., Goering,A.W., Ju,K.-S., Haines,R.R.,
            Tchalukov,K.A., Labeda,D.P., Kelleher,N.L. and Metcalf,W.W.
  TITLE     A Roadmap for Natural Product Discovery Based on Large-Scale
            Genomics and Metabolomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8988808)
  AUTHORS   Doroghazi,J.R., Ju,K.-S. and Metcalf,W.W.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-APR-2014) Institute for Genomic Biology, University
            of Illinois at Urbana-Champaign, 3109 IGB, MC-195, Urbana, IL
            61801, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JNYL00000000.1.
            The Streptomyces monomycini whole genome shotgun (WGS) project has
            the project accession NZ_JNYL00000000.  This version of the project
            (01) has the accession number NZ_JNYL01000000, and consists of
            sequences JNYL01000001-JNYL01000645.
            Bacteria available from NRRL.
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: High-Quality Draft
            Current Finishing Status :: High-Quality Draft
            Assembly Method          :: IDBA UD v. 1.0.9
            Genome Coverage          :: 24x
            Sequencing Technology    :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000715845.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:51:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,113
            CDSs (total)                      :: 8,048
            Genes (coding)                    :: 7,691
            CDSs (with protein)               :: 7,691
            Genes (RNA)                       :: 65
            rRNAs                             :: 1, 1 (5S, 16S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            tRNAs                             :: 60
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 357
            CDSs (without protein)            :: 357
            Pseudo Genes (ambiguous residues) :: 0 of 357
            Pseudo Genes (frameshifted)       :: 94 of 357
            Pseudo Genes (incomplete)         :: 277 of 357
            Pseudo Genes (internal stop)      :: 16 of 357
            Pseudo Genes (multiple problems)  :: 28 of 357
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8988808
                     /organism="Streptomyces monomycini"
                     /mol_type="genomic DNA"
                     /strain="NRRL B-24309"
                     /culture_collection="NRRL:B-24309"
                     /type_material="type strain of Streptomyces monomycini"
                     /db_xref="taxon:371720"
                     /collection_date="2010"
WGS         JNYL01000001-JNYL01000645
WGS_SCAFLD  NZ_JNYL01000032-NZ_JNYL01000033
WGS_SCAFLD  NZ_JNYL01000036
WGS_SCAFLD  NZ_JNYL01000060
WGS_SCAFLD  NZ_JNYL01000100
WGS_SCAFLD  NZ_JNYL01000110
WGS_SCAFLD  NZ_JNYL01000179
WGS_SCAFLD  NZ_JNYL01000202
WGS_SCAFLD  NZ_JNYL01000208
WGS_SCAFLD  NZ_JNYL01000218
WGS_SCAFLD  NZ_JNYL01000249
WGS_SCAFLD  NZ_JNYL01000289
WGS_SCAFLD  NZ_JNYL01000308-NZ_JNYL01000309
WGS_SCAFLD  NZ_JNYL01000317
WGS_SCAFLD  NZ_JNYL01000322-NZ_JNYL01000323
WGS_SCAFLD  NZ_JNYL01000334
WGS_SCAFLD  NZ_JNYL01000391
WGS_SCAFLD  NZ_JNYL01000404-NZ_JNYL01000406
WGS_SCAFLD  NZ_JNYL01000415
WGS_SCAFLD  NZ_JNYL01000459
WGS_SCAFLD  NZ_JNYL01000491
WGS_SCAFLD  NZ_JNYL01000494
WGS_SCAFLD  NZ_JNYL01000509
WGS_SCAFLD  NZ_JNYL01000524-NZ_JNYL01000527
WGS_SCAFLD  NZ_JNYL01000530-NZ_JNYL01000533
WGS_SCAFLD  NZ_JNYL01000537
WGS_SCAFLD  NZ_JNYL01000543-NZ_JNYL01000545
WGS_SCAFLD  NZ_JNYL01000555
WGS_SCAFLD  NZ_JNYL01000559
WGS_SCAFLD  NZ_JNYL01000562
WGS_SCAFLD  NZ_JNYL01000567-NZ_JNYL01000576
WGS_SCAFLD  NZ_JNYL01000581-NZ_JNYL01000582
WGS_SCAFLD  NZ_JNYL01000587-NZ_JNYL01000588
WGS_SCAFLD  NZ_JNYL01000591-NZ_JNYL01000593
WGS_SCAFLD  NZ_JNYL01000596
WGS_SCAFLD  NZ_JNYL01000599-NZ_JNYL01000602
WGS_SCAFLD  NZ_JNYL01000606-NZ_JNYL01000607
WGS_SCAFLD  NZ_JNYL01000614
WGS_SCAFLD  NZ_JNYL01000617
WGS_SCAFLD  NZ_JNYL01000622-NZ_JNYL01000625
WGS_SCAFLD  NZ_JNYL01000628-NZ_JNYL01000632
WGS_SCAFLD  NZ_JNYL01000639-NZ_JNYL01000643
WGS_SCAFLD  NZ_KL571054-NZ_KL571194
//
LOCUS       NZ_JNXD01000000      8762241 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces flavovariabilis strain NRRL B-16367, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JNXD00000000
VERSION     NZ_JNXD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02645208
            Assembly: GCF_000725785.1
KEYWORDS    WGS; HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Streptomyces flavovariabilis
  ORGANISM  Streptomyces flavovariabilis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 8762241)
  AUTHORS   Doroghazi,J.R., Albright,J.C., Goering,A.W., Ju,K.-S., Haines,R.R.,
            Tchalukov,K.A., Labeda,D.P., Kelleher,N.L. and Metcalf,W.W.
  TITLE     A Roadmap for Natural Product Discovery Based on Large-Scale
            Genomics and Metabolomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8762241)
  AUTHORS   Doroghazi,J.R., Ju,K.-S. and Metcalf,W.W.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2014) Institute for Genomic Biology, University
            of Illinois at Urbana-Champaign, 3109 IGB, MC-195, Urbana, IL
            61801, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JNXD00000000.1.
            The Streptomyces flavovariabilis whole genome shotgun (WGS) project
            has the project accession NZ_JNXD00000000.  This version of the
            project (01) has the accession number NZ_JNXD01000000, and consists
            of sequences JNXD01000001-JNXD01000142.
            Bacteria available from NRRL.
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: High-Quality Draft
            Current Finishing Status :: High-Quality Draft
            Assembly Method          :: IDBA UD v. 1.0.9
            Assembly Name            :: Doro.v1.0
            Genome Coverage          :: 85x
            Sequencing Technology    :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000725785.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:10:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,062
            CDSs (total)                      :: 7,984
            Genes (coding)                    :: 7,685
            CDSs (with protein)               :: 7,685
            Genes (RNA)                       :: 78
            rRNAs                             :: 3, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 2, 1 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 299
            CDSs (without protein)            :: 299
            Pseudo Genes (ambiguous residues) :: 0 of 299
            Pseudo Genes (frameshifted)       :: 114 of 299
            Pseudo Genes (incomplete)         :: 230 of 299
            Pseudo Genes (internal stop)      :: 17 of 299
            Pseudo Genes (multiple problems)  :: 56 of 299
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8762241
                     /organism="Streptomyces flavovariabilis"
                     /mol_type="genomic DNA"
                     /strain="NRRL B-16367"
                     /culture_collection="NRRL:B-16367"
                     /type_material="type strain of Streptomyces
                     flavovariabilis"
                     /db_xref="taxon:284031"
                     /collection_date="2010"
WGS         JNXD01000001-JNXD01000142
WGS_SCAFLD  NZ_JNXD01000001-NZ_JNXD01000066
WGS_SCAFLD  NZ_JNXD01000069-NZ_JNXD01000142
WGS_SCAFLD  NZ_KL647130
//
LOCUS       NZ_LMWR01000000     11628668 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces olivochromogenes strain DSM 40451, whole genome
            shotgun sequencing project.
ACCESSION   NZ_LMWR00000000
VERSION     NZ_LMWR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04193347
            Assembly: GCF_001514115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces olivochromogenes
  ORGANISM  Streptomyces olivochromogenes
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 11628668)
  AUTHORS   Ruckert,C., Winkler,A., Kalinowski,J., Kampfer,P. and Glaeser,S.
  TITLE     Draft genome sequence of Streptomyces olivochromogenes DSM 40451,
            type strain for the species Streptomyces olivochromogenes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 11628668)
  AUTHORS   Ruckert,C., Winkler,A., Kalinowski,J., Kampfer,P. and Glaeser,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-OCT-2015) CeBiTec, Bielefeld University, Sequenz 1,
            Bielefeld 33615, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LMWR00000000.1.
            The Streptomyces olivochromogenes whole genome shotgun (WGS)
            project has the project accession NZ_LMWR00000000.  This version of
            the project (01) has the accession number NZ_LMWR01000000, and
            consists of sequences LMWR01000001-LMWR01000169.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-OCT-2014
            Assembly Method        :: Newbler v. 2.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 75.3x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001514115.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:21:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 10,681
            CDSs (total)                      :: 10,600
            Genes (coding)                    :: 10,180
            CDSs (with protein)               :: 10,180
            Genes (RNA)                       :: 81
            rRNAs                             :: 1, 1 (5S, 16S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            tRNAs                             :: 76
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 420
            CDSs (without protein)            :: 420
            Pseudo Genes (ambiguous residues) :: 0 of 420
            Pseudo Genes (frameshifted)       :: 159 of 420
            Pseudo Genes (incomplete)         :: 345 of 420
            Pseudo Genes (internal stop)      :: 35 of 420
            Pseudo Genes (multiple problems)  :: 113 of 420
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11628668
                     /organism="Streptomyces olivochromogenes"
                     /mol_type="genomic DNA"
                     /strain="DSM 40451"
                     /isolation_source="soil"
                     /culture_collection="DSM:40451"
                     /type_material="type strain of Streptomyces
                     olivochromogenes"
                     /db_xref="taxon:1963"
WGS         LMWR01000001-LMWR01000169
WGS_SCAFLD  NZ_KQ948451-NZ_KQ948548
//
LOCUS       NZ_JOFU01000000      8945636 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces griseofuscus strain NRRL B-5429, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JOFU00000000
VERSION     NZ_JOFU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02645272
            Assembly: GCF_000718315.1
KEYWORDS    WGS; HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Streptomyces griseofuscus
  ORGANISM  Streptomyces griseofuscus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 8945636)
  AUTHORS   Doroghazi,J.R., Albright,J.C., Goering,A.W., Ju,K.-S., Haines,R.R.,
            Tchalukov,K.A., Labeda,D.P., Kelleher,N.L. and Metcalf,W.W.
  TITLE     A Roadmap for Natural Product Discovery Based on Large-Scale
            Genomics and Metabolomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8945636)
  AUTHORS   Doroghazi,J.R., Ju,K.-S. and Metcalf,W.W.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2014) Institute for Genomic Biology, University
            of Illinois at Urbana-Champaign, 3109 IGB, MC-195, Urbana, IL
            61801, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JOFU00000000.1.
            The Streptomyces griseofuscus whole genome shotgun (WGS) project
            has the project accession NZ_JOFU00000000.  This version of the
            project (01) has the accession number NZ_JOFU01000000, and consists
            of sequences JOFU01000001-JOFU01000244.
            Bacteria available from NRRL.
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: High-Quality Draft
            Current Finishing Status :: High-Quality Draft
            Assembly Method          :: IDBA UD v. 1.0.9
            Genome Coverage          :: 226x
            Sequencing Technology    :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000718315.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:11:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,324
            CDSs (total)                      :: 8,232
            Genes (coding)                    :: 7,933
            CDSs (with protein)               :: 7,933
            Genes (RNA)                       :: 92
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 82
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 308
            CDSs (without protein)            :: 299
            Pseudo Genes (ambiguous residues) :: 0 of 308
            Pseudo Genes (frameshifted)       :: 106 of 308
            Pseudo Genes (incomplete)         :: 235 of 308
            Pseudo Genes (internal stop)      :: 24 of 308
            Pseudo Genes (multiple problems)  :: 61 of 308
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8945636
                     /organism="Streptomyces griseofuscus"
                     /mol_type="genomic DNA"
                     /strain="NRRL B-5429"
                     /isolation_source="soil"
                     /culture_collection="NRRL:B-5429"
                     /type_material="type strain of Streptomyces griseofuscus"
                     /db_xref="taxon:146922"
                     /geo_loc_name="Japan: Fukushima Pref."
                     /collection_date="2010"
WGS         JOFU01000001-JOFU01000244
WGS_SCAFLD  NZ_JOFU01000001-NZ_JOFU01000244
//
LOCUS       NZ_ABYA01000000      8223278 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces viridosporus ATCC 14672, whole genome shotgun
            sequencing project.
ACCESSION   NZ_ABYA00000000
VERSION     NZ_ABYA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02595233
            Assembly: GCF_000156435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces viridosporus ATCC 14672
  ORGANISM  Streptomyces viridosporus ATCC 14672
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 8223278)
  AUTHORS   Fischbach,M., Ward,D., Young,S., Kodira,C.D., Zeng,Q., Koehrsen,M.,
            Godfrey,P., Alvarado,L., Berlin,A.M., Borenstein,D., Chen,Z.,
            Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Griggs,A.,
            Gujja,S., Heiman,D.I., Hepburn,T.A., Howarth,C., Jen,D., Larson,L.,
            Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Saif,S.,
            Shea,T.D., Shenoy,N., Sisk,P., Stolte,C., Sykes,S.N., Walk,T.,
            White,J., Yandava,C., Straight,P., Clardy,J., Hung,D., Kolter,R.,
            Mekalanos,J., Walker,S., Walsh,C.T., Wieland,B.L.C., Ilzarbe,M.,
            Galagan,J., Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genome Sequencing Platform, Broad Institute
            Microbial Sequencing Center
  TITLE     Annotation of Streptomyces ghanaensis ATCC 14672
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8223278)
  AUTHORS   Fischbach,M., Ward,D., Young,S., Jaffe,D., Gnerre,S., Berlin,A.,
            Heiman,D., Hepburn,T., Sykes,S., Godfrey,P., Alvarado,L.,
            Kodira,C.D., Straight,P., Clardy,J., Hung,D., Kolter,R.,
            Mekalanos,J., Walker,S., Walsh,C.T., Lander,E., Galagan,J.,
            Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genome Sequencing Platform
  TITLE     Direct Submission
  JOURNAL   Submitted (30-OCT-2008) Broad Institute of MIT and Harvard, 7
            Cambridge Center, Cambridge, MA 02142, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ABYA00000000.1.
            The Streptomyces viridosporus ATCC 14672 whole genome shotgun (WGS)
            project has the project accession NZ_ABYA00000000.  This version of
            the project (01) has the accession number NZ_ABYA01000000, and
            consists of sequences ABYA01000001-ABYA01000616.
            Genome coverage: 11.6X (10.8X Q>20)
            Annotation was added to the scaffolds in March 2010.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000156435.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:26:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,821
            CDSs (total)                      :: 7,739
            Genes (coding)                    :: 7,170
            CDSs (with protein)               :: 7,170
            Genes (RNA)                       :: 82
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 569
            CDSs (without protein)            :: 569
            Pseudo Genes (ambiguous residues) :: 0 of 569
            Pseudo Genes (frameshifted)       :: 253 of 569
            Pseudo Genes (incomplete)         :: 399 of 569
            Pseudo Genes (internal stop)      :: 32 of 569
            Pseudo Genes (multiple problems)  :: 106 of 569
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8223278
                     /organism="Streptomyces viridosporus ATCC 14672"
                     /mol_type="genomic DNA"
                     /strain="ATCC 14672"
                     /culture_collection="ATCC:14672"
                     /type_material="type strain of Streptomyces ghanaensis"
                     /db_xref="taxon:566461"
WGS         ABYA01000001-ABYA01000616
WGS_SCAFLD  NZ_DS999641-NZ_DS999643
//
LOCUS       NZ_AGBF01000000      8221694 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces zinciresistens K42, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AGBF00000000
VERSION     NZ_AGBF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02471576
            Assembly: GCF_000225525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces zinciresistens K42
  ORGANISM  Streptomyces zinciresistens K42
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 8221694)
  AUTHORS   Lin,Y., Hao,X., Johnstone,L., Miller,S.J., Wei,G. and Rensing,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-AUG-2011) Soil, Water and Environmental Science,
            University of Arizona, P.O. BOX 210038, Tucson, AZ 85721, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AGBF00000000.1.
            The Streptomyces zinciresistens K42 whole genome shotgun (WGS)
            project has the project accession NZ_AGBF00000000.  This version of
            the project (01) has the accession number NZ_AGBF01000000, and
            consists of sequences AGBF01000001-AGBF01000525.
            The bacteria is available from the College of Life Sciences,
            Northwest A & F University, China.  Streptomyces zinciresistens K42
            was also deposited in two culture collections: Agricultural Culture
            Collection of China (ACCC) http://www.accc.org (ACCC 41871T) and
            The Culture Collection, University of Helsinki (HAMBI)
            http://www.ccug.gu.se<http://www.ccug.gu.se (HAMBI 3107T).
            
            Genome was manually curated based on annotation generated by the
            NCBI Prokaryotic Genomes Automatic Annotation Pipeline Group.
            Information about the Pipeline can be found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.5.3.
            Genome Coverage       :: 43x
            Sequencing Technology :: 454 GS FLX Titanium
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000225525.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:24:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,667
            CDSs (total)                      :: 7,590
            Genes (coding)                    :: 7,271
            CDSs (with protein)               :: 7,271
            Genes (RNA)                       :: 77
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 319
            CDSs (without protein)            :: 319
            Pseudo Genes (ambiguous residues) :: 0 of 319
            Pseudo Genes (frameshifted)       :: 82 of 319
            Pseudo Genes (incomplete)         :: 269 of 319
            Pseudo Genes (internal stop)      :: 9 of 319
            Pseudo Genes (multiple problems)  :: 38 of 319
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8221694
                     /organism="Streptomyces zinciresistens K42"
                     /mol_type="genomic DNA"
                     /strain="K42"
                     /isolation_source="soil from a zinc and copper mine"
                     /type_material="type strain of Streptomyces
                     zinciresistens"
                     /db_xref="taxon:700597"
                     /geo_loc_name="China: Shaanxi Province"
                     /note="resistant to zinc and cadmium"
WGS         AGBF01000001-AGBF01000525
WGS_SCAFLD  NZ_AGBF01000001-NZ_AGBF01000525
//
LOCUS       NZ_FNTD01000000      8473721 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces misionensis strain DSM 40306, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNTD00000000
VERSION     NZ_FNTD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04490357
            Assembly: GCF_900104815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces misionensis
  ORGANISM  Streptomyces misionensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNTD00000000.1.
            The Streptomyces misionensis whole genome shotgun (WGS) project has
            the project accession NZ_FNTD00000000.  This version of the project
            (01) has the accession number NZ_FNTD01000000, and consists of
            sequences FNTD01000001-FNTD01000005.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900104815.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:30:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,690
            CDSs (total)                      :: 7,590
            Genes (coding)                    :: 7,453
            CDSs (with protein)               :: 7,453
            Genes (RNA)                       :: 100
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 147
            CDSs (without protein)            :: 137
            Pseudo Genes (ambiguous residues) :: 0 of 147
            Pseudo Genes (frameshifted)       :: 61 of 147
            Pseudo Genes (incomplete)         :: 106 of 147
            Pseudo Genes (internal stop)      :: 11 of 147
            Pseudo Genes (multiple problems)  :: 38 of 147
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8473721
                     /organism="Streptomyces misionensis"
                     /mol_type="genomic DNA"
                     /strain="DSM 40306"
                     /type_material="type strain of Streptomyces misionensis"
                     /db_xref="taxon:67331"
WGS         FNTD01000001-FNTD01000005
WGS_SCAFLD  NZ_FNTD01000001-NZ_FNTD01000005
//
LOCUS       NZ_NGFN01000000      9204525 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces swartbergensis strain HMC13, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NGFN00000000
VERSION     NZ_NGFN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06928588
            Assembly: GCF_002148965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces swartbergensis
  ORGANISM  Streptomyces swartbergensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 9204525)
  AUTHORS   Le Roes-Hill,M., Prins,A. and Durrell,K.A.
  TITLE     Biotechnological potential of actinobacteria isolated from South
            African environments
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 9204525)
  AUTHORS   Le Roes-Hill,M., Prins,A. and Durrell,K.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAY-2017) Biocatalysis and Technical Biology Research
            Group, Cape Peninsula University of Technology, Symphony Way,
            Bellville 7530, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NGFN00000000.1.
            The Streptomyces swartbergensis whole genome shotgun (WGS) project
            has the project accession NZ_NGFN00000000.  This version of the
            project (01) has the accession number NZ_NGFN01000000, and consists
            of sequences NGFN01000001-NGFN01000870.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 28-JAN-2017
            Assembly Method        :: A5 Miseq v. August-2018
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 43x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002148965.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:40:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 9,009
            CDSs (total)                      :: 8,910
            Genes (coding)                    :: 8,294
            CDSs (with protein)               :: 8,294
            Genes (RNA)                       :: 99
            rRNAs                             :: 8, 6, 12 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1 (5S, 16S)
            partial rRNAs                     :: 5, 12 (16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 616
            CDSs (without protein)            :: 616
            Pseudo Genes (ambiguous residues) :: 0 of 616
            Pseudo Genes (frameshifted)       :: 154 of 616
            Pseudo Genes (incomplete)         :: 534 of 616
            Pseudo Genes (internal stop)      :: 24 of 616
            Pseudo Genes (multiple problems)  :: 94 of 616
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9204525
                     /organism="Streptomyces swartbergensis"
                     /mol_type="genomic DNA"
                     /strain="HMC13"
                     /isolation_source="Mountain soil"
                     /type_material="type strain of Streptomyces
                     swartbergensis"
                     /db_xref="taxon:487165"
                     /geo_loc_name="South Africa: Uniondale"
                     /collection_date="2003-03-01"
                     /collected_by="Marilize Le Roes-Hill"
                     /identified_by="Marilize Le Roes-Hill"
WGS         NGFN01000001-NGFN01000870
WGS_SCAFLD  NZ_NGFN01000001-NZ_NGFN01000870
//
LOCUS       NZ_MUNH01000000      6182748 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces recifensis strain NRRL B-3811, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MUNH00000000
VERSION     NZ_MUNH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06283862
            Assembly: GCF_002154615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces recifensis
  ORGANISM  Streptomyces recifensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 6182748)
  AUTHORS   Labeda,D.P.
  TITLE     Multigene phylogeny of the Streptomycetaceae
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6182748)
  AUTHORS   Labeda,D.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JAN-2017) Mycotoxin Prevention and Appllied
            Microbiology Research, USDA/ARS/NCAUR, 1815 N. University Street,
            Peoria, IL 61604, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MUNH00000000.1.
            The Streptomyces recifensis whole genome shotgun (WGS) project has
            the project accession NZ_MUNH00000000.  This version of the project
            (01) has the accession number NZ_MUNH01000000, and consists of
            sequences MUNH01000001-MUNH01000926.
            Bacteria and source DNA available from ARS Culture Collection,
            Peoria, IL.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 16-DEC-2016
            Assembly Method        :: CLC Genomics Workbench v. 9.5.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002154615.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:39:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,246
            CDSs (total)                      :: 6,177
            Genes (coding)                    :: 5,752
            CDSs (with protein)               :: 5,752
            Genes (RNA)                       :: 69
            rRNAs                             :: 1, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 3 (16S)
            tRNAs                             :: 61
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 425
            CDSs (without protein)            :: 425
            Pseudo Genes (ambiguous residues) :: 1 of 425
            Pseudo Genes (frameshifted)       :: 48 of 425
            Pseudo Genes (incomplete)         :: 398 of 425
            Pseudo Genes (internal stop)      :: 4 of 425
            Pseudo Genes (multiple problems)  :: 24 of 425
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6182748
                     /organism="Streptomyces recifensis"
                     /mol_type="genomic DNA"
                     /strain="NRRL B-3811"
                     /isolation_source="soil"
                     /culture_collection="NRRL:B-3811"
                     /type_material="type strain of Streptomyces recifensis"
                     /db_xref="taxon:67355"
                     /geo_loc_name="Brazil"
                     /collection_date="1970"
WGS         MUNH01000001-MUNH01000926
WGS_SCAFLD  NZ_MUNH01000001-NZ_MUNH01000926
//
LOCUS       NZ_MUNF01000000      7950851 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces murinus strain NRRL B-2286, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MUNF00000000
VERSION     NZ_MUNF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06282499
            Assembly: GCF_002154555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces murinus
  ORGANISM  Streptomyces murinus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 7950851)
  AUTHORS   Labeda,D.P.
  TITLE     Multigene Phylogeny of the Streptomycetaceae
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7950851)
  AUTHORS   Labeda,D.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JAN-2017) Mycotoxin Prevention and Appllied
            Microbiology Research, USDA/ARS/NCAUR, 1815 N. University Street,
            Peoria, IL 61604, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MUNF00000000.1.
            The Streptomyces murinus whole genome shotgun (WGS) project has the
            project accession NZ_MUNF00000000.  This version of the project
            (01) has the accession number NZ_MUNF01000000, and consists of
            sequences MUNF01000001-MUNF01001088.
            Bacteria and source DNA available from ARS Culture Collection,
            Peoria, IL USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 15-DEC-2016
            Assembly Method        :: CLCbio Genomics Workbench v. 9.5.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002154555.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:58:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,638
            CDSs (total)                      :: 7,561
            Genes (coding)                    :: 7,062
            CDSs (with protein)               :: 7,062
            Genes (RNA)                       :: 77
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 71
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 506
            CDSs (without protein)            :: 499
            Pseudo Genes (ambiguous residues) :: 1 of 506
            Pseudo Genes (frameshifted)       :: 103 of 506
            Pseudo Genes (incomplete)         :: 420 of 506
            Pseudo Genes (internal stop)      :: 8 of 506
            Pseudo Genes (multiple problems)  :: 32 of 506
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7950851
                     /organism="Streptomyces murinus"
                     /mol_type="genomic DNA"
                     /strain="NRRL B-2286"
                     /isolation_source="soil"
                     /culture_collection="NRRL:B-2286"
                     /type_material="type strain of Streptomyces murinus"
                     /db_xref="taxon:33900"
                     /geo_loc_name="Germany"
                     /collection_date="1959"
WGS         MUNF01000001-MUNF01001088
WGS_SCAFLD  NZ_MUNF01000001-NZ_MUNF01001088
//
LOCUS       NZ_SMCP01000000      2716645 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Testudinibacter aquarius strain DSM 28140, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SMCP00000000
VERSION     NZ_SMCP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10363311
            Assembly: GCF_004342725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Testudinibacter aquarius
  ORGANISM  Testudinibacter aquarius
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Testudinibacter.
REFERENCE   1  (bases 1 to 2716645)
  AUTHORS   Goeker,M.
  TITLE     Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing
            the most valuable type-strain genomes for metagenomic binning,
            comparative biology and taxonomic classification
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2716645)
  AUTHORS   Goeker,M., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAR-2019) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SMCP00000000.1.
            The Testudinibacter aquarius whole genome shotgun (WGS) project has
            the project accession NZ_SMCP00000000.  This version of the project
            (01) has the accession number NZ_SMCP01000000, and consists of
            sequences SMCP01000001-SMCP01000024.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.11.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 552.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004342725.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:19:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,548
            CDSs (total)                      :: 2,488
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 60
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2, 1 (16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 18
            CDSs (without protein)            :: 18
            Pseudo Genes (ambiguous residues) :: 0 of 18
            Pseudo Genes (frameshifted)       :: 4 of 18
            Pseudo Genes (incomplete)         :: 15 of 18
            Pseudo Genes (internal stop)      :: 1 of 18
            Pseudo Genes (multiple problems)  :: 2 of 18
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2716645
                     /organism="Testudinibacter aquarius"
                     /mol_type="genomic DNA"
                     /strain="DSM 28140"
                     /culture_collection="DSM:28140"
                     /type_material="type strain of Testudinibacter aquarius"
                     /db_xref="taxon:1524974"
                     /geo_loc_name="Denmark: Randers, Randers Regnskov"
                     /lat_lon="56.4439584 N 10.043028 E"
WGS         SMCP01000001-SMCP01000024
WGS_SCAFLD  NZ_SMCP01000001-NZ_SMCP01000024
//
LOCUS       NZ_RFFM01000000      4668208 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stutzerimonas zhaodongensis strain NEAU-ST5-21, whole genome
            shotgun sequencing project.
ACCESSION   NZ_RFFM00000000
VERSION     NZ_RFFM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10266091
            Assembly: GCF_003696365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stutzerimonas zhaodongensis
  ORGANISM  Stutzerimonas zhaodongensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Stutzerimonas.
REFERENCE   1  (bases 1 to 4668208)
  AUTHORS   Peng,J. and Liu,Z.-P.
  TITLE     Pseudomonas zhaodongensis NEAU-ST5-21(T) genome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4668208)
  AUTHORS   Peng,J. and Liu,Z.-P.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-OCT-2018) State Key Laboratory of Microbial
            Resources, Institute of Microbiology, Chinese Academy of Sciences,
            West Beichen Road, Chaoyang District, Beijing, Beijing 100101,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RFFM00000000.1.
            The Stutzerimonas zhaodongensis whole genome shotgun (WGS) project
            has the project accession NZ_RFFM00000000.  This version of the
            project (01) has the accession number NZ_RFFM01000000, and consists
            of sequences RFFM01000001-RFFM01000027.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: SEP-2018
            Assembly Method        :: SOAPdenovo v. 2.04; GapCloser v. 1.12
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 285.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003696365.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:15:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,336
            CDSs (total)                      :: 4,273
            Genes (coding)                    :: 4,237
            CDSs (with protein)               :: 4,237
            Genes (RNA)                       :: 63
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 13 of 36
            Pseudo Genes (incomplete)         :: 27 of 36
            Pseudo Genes (internal stop)      :: 2 of 36
            Pseudo Genes (multiple problems)  :: 6 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4668208
                     /organism="Stutzerimonas zhaodongensis"
                     /mol_type="genomic DNA"
                     /strain="NEAU-ST5-21"
                     /culture_collection="CGMCC:1.12667"
                     /type_material="type strain of Pseudomonas zhaodongensis"
                     /db_xref="taxon:1176257"
                     /geo_loc_name="China: Beijing"
                     /collection_date="2018-07"
WGS         RFFM01000001-RFFM01000027
WGS_SCAFLD  NZ_RFFM01000001-NZ_RFFM01000027
//
LOCUS       NZ_AXXW01000000       924458 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Tullyiplasma multilocale ATCC 49900, whole genome shotgun
            sequencing project.
ACCESSION   NZ_AXXW00000000
VERSION     NZ_AXXW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02441097
            Assembly: GCF_000483165.1
KEYWORDS    WGS; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Tullyiplasma multilocale ATCC 49900
  ORGANISM  Tullyiplasma multilocale ATCC 49900
            Bacteria; Bacillati; Mycoplasmatota; Mollicutes; Mycoplasmataceae;
            Tullyiplasma.
REFERENCE   1  (bases 1 to 924458)
  AUTHORS   Kyrpides,N., Huntemann,M., Han,J., Chen,A., Mavromatis,K.,
            Markowitz,V., Palaniappan,K., Ivanova,N., Schaumberg,A., Pati,A.,
            Liolios,K., Nordberg,H.P., Cantor,M.N., Hua,S.X. and Woyke,T.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (24-SEP-2013) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AXXW00000000.1.
            The Tullyiplasma multilocale ATCC 49900 whole genome shotgun (WGS)
            project has the project accession NZ_AXXW00000000.  This version of
            the project (01) has the accession number NZ_AXXW01000000, and
            consists of sequences AXXW01000001-AXXW01000012.
            URL -- http://www.jgi.doe.gov
            JGI Project ID: 408366
            Source DNA and organism available from Tim Lilburn at the American
            Type Culture Collection (ATCC) (TLilburn@atcc.org)
            Contacts: Nikos  Kyrpides (nckyrpides@lbl.gov)
                      Tanja Woyke (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI
            Annotation by JGI
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376)
            Full annotations are available from IMG.
            
            ##MIGS-Data-START##
            environment        :: Host
            investigation_type :: bacteria_archaea
            project_name       :: Acholeplasma multilocale ATCC 49900
            sequencing_meth    :: WGS
            ref_biomaterial    :: ATCC 49900, NCTC 11723
            GOLD Stamp ID      :: Gi15281
            Type Strain        :: Yes
            Funding Program    :: DOE-CSP 2012
            Isolation Site     :: nasopharynx of horse
            Gram Staining      :: Gram-
            ##MIGS-Data-END##
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: Unknown program v. before 2013-04-29
            Genome Coverage          :: Unknown
            Sequencing Technology    :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000483165.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 09:46:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 877
            CDSs (total)                      :: 838
            Genes (coding)                    :: 835
            CDSs (with protein)               :: 835
            Genes (RNA)                       :: 39
            rRNAs                             :: 2, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 2 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 0 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..924458
                     /organism="Tullyiplasma multilocale ATCC 49900"
                     /mol_type="genomic DNA"
                     /strain="ATCC 49900"
                     /culture_collection="ATCC:49900"
                     /type_material="type strain of Acholeplasma multilocale"
                     /db_xref="taxon:1278299"
WGS         AXXW01000001-AXXW01000012
WGS_SCAFLD  NZ_AXXW01000001-NZ_AXXW01000002
WGS_SCAFLD  NZ_AXXW01000005-NZ_AXXW01000012
WGS_SCAFLD  NZ_KI519557
//
LOCUS       NZ_ARQK01000000      2765337 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Thioalkalivibrio thiocyanoxidans ARh2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_ARQK00000000
VERSION     NZ_ARQK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02441309
            Assembly: GCF_000385215.1
KEYWORDS    WGS; GSC:MIGS:2.1; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Thioalkalivibrio thiocyanoxidans ARh2
  ORGANISM  Thioalkalivibrio thiocyanoxidans ARh2
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.
REFERENCE   1  (bases 1 to 2765337)
  AUTHORS   Muyzer,G., Huntemann,M., Han,J., Chen,A., Kyrpides,N.,
            Mavromatis,K., Markowitz,V., Palaniappan,K., Ivanova,N.,
            Schaumberg,A., Pati,A., Liolios,K., Nordberg,H.P., Cantor,M.N.,
            Hua,S.X. and Woyke,T.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (22-APR-2013) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ARQK00000000.1.
            The Thioalkalivibrio thiocyanoxidans ARh2 whole genome shotgun
            (WGS) project has the project accession NZ_ARQK00000000.  This
            version of the project (01) has the accession number
            NZ_ARQK01000000, and consists of sequences
            ARQK01000001-ARQK01000061.
            URL -- http://www.jgi.doe.gov
            JGI Project ID: 1008667
            Source DNA and Organism available from Gerard   Muyzer
            (g.muijzer@uva.nl)
            Source DNA available from Gerard   Muyzer (g.muijzer@uva.nl)
            Organism available from Gerard   Muyzer (g.muijzer@uva.nl)
            Contacts: Gerard   Muyzer (g.muijzer@uva.nl)
                      Tanja Woyke (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI-PGF
            Annotation by JGI-ORNL
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376)
            Full annotations are available from IMG.
            
            ##MIGS-Data-START##
            investigation_type  :: bacteria_archaea
            project_name        :: Thioalkalivibrio thiocyanoxidans ARh2
            collection_date     :: Missing
            lat_lon             :: Missing
            depth               :: Missing
            alt_elev            :: Missing
            country             :: Missing
            num_replicons       :: Missing
            ref_biomaterial     :: Missing
            biotic_relationship :: Missing
            rel_to_oxygen       :: Missing
            isol_growth_condt   :: Missing
            assembly            :: Velvet v. 1.1.04; ALLPATHS v. r42328
            finishing_strategy  :: Missing
            environment         :: Missing
            trophic_level       :: Missing
            sequencing_meth     :: WGS
            GOLD Stamp ID       :: Gi22107
            ##MIGS-Data-END##
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: Velvet v. 1.1.04; ALLPATHS v. r42328
            Genome Coverage          :: Unknown
            Sequencing Technology    :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000385215.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 09:57:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,663
            CDSs (total)                      :: 2,609
            Genes (coding)                    :: 2,577
            CDSs (with protein)               :: 2,577
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 11 of 32
            Pseudo Genes (incomplete)         :: 23 of 32
            Pseudo Genes (internal stop)      :: 4 of 32
            Pseudo Genes (multiple problems)  :: 5 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2765337
                     /organism="Thioalkalivibrio thiocyanoxidans ARh2"
                     /mol_type="genomic DNA"
                     /strain="ARh2"
                     /db_xref="taxon:1279019"
WGS         ARQK01000001-ARQK01000061
WGS_SCAFLD  NZ_ARQK01000001-NZ_ARQK01000061
//
LOCUS       NZ_MCGQ01000000     10519408 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces diastatochromogenes strain DSM 40608, whole genome
            shotgun sequencing project.
ACCESSION   NZ_MCGQ00000000
VERSION     NZ_MCGQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05462163
            Assembly: GCF_002242805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces diastatochromogenes
  ORGANISM  Streptomyces diastatochromogenes
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 10519408)
  AUTHORS   Podduturi,R., Lukassen,M.B., Clausen,N., Nielsen,J.L. and
            Jorgensen,N.O.
  TITLE     Draft genome of Streptomyces diastatochromogenes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 10519408)
  AUTHORS   Podduturi,R., Lukassen,M.B., Clausen,N., Nielsen,J.L. and
            Jorgensen,N.O.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUL-2016) Department of Plant and Environmental
            Sciences, University of Copenhagen, Thorvaldsensvej 40,
            Frederiksberg 1870, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MCGQ00000000.1.
            The Streptomyces diastatochromogenes whole genome shotgun (WGS)
            project has the project accession NZ_MCGQ00000000.  This version of
            the project (01) has the accession number NZ_MCGQ01000000, and
            consists of sequences MCGQ01000001-MCGQ01000242.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: genomic workbench v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 43.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002242805.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:47:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 9,615
            CDSs (total)                      :: 9,526
            Genes (coding)                    :: 9,229
            CDSs (with protein)               :: 9,229
            Genes (RNA)                       :: 89
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 1 (16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 305
            CDSs (without protein)            :: 297
            Pseudo Genes (ambiguous residues) :: 0 of 305
            Pseudo Genes (frameshifted)       :: 70 of 305
            Pseudo Genes (incomplete)         :: 268 of 305
            Pseudo Genes (internal stop)      :: 21 of 305
            Pseudo Genes (multiple problems)  :: 54 of 305
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10519408
                     /organism="Streptomyces diastatochromogenes"
                     /mol_type="genomic DNA"
                     /strain="DSM 40608"
                     /isolation_source="soil"
                     /culture_collection="DSM:40608"
                     /db_xref="taxon:42236"
                     /geo_loc_name="Japan"
                     /collection_date="1940"
WGS         MCGQ01000001-MCGQ01000242
WGS_SCAFLD  NZ_MCGQ01000001-NZ_MCGQ01000242
//
LOCUS       NZ_CBAKVD010000000   1898789 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Synechococcus sp. isolate
            PELAGICS-MAG-m2-bin114280-MOSTE-SM-03aug20., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBAKVD000000000
VERSION     NZ_CBAKVD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117451808
            Assembly: GCF_964734005.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Synechococcus sp. (freshwater metagenome)
  ORGANISM  Synechococcus sp.
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Synechococcaceae; Synechococcus.
REFERENCE   1  (bases 1 to 1898789)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-DEC-2024) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBAKVD000000000.1.
            The Synechococcus sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBAKVD000000000.  This version of the project
            (01) has the accession number NZ_CBAKVD010000000, and consists of
            sequences CBAKVD010000001-CBAKVD010000143.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964734005.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:22:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,185
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 2,081
            CDSs (with protein)               :: 2,081
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 58
            CDSs (without protein)            :: 58
            Pseudo Genes (ambiguous residues) :: 0 of 58
            Pseudo Genes (frameshifted)       :: 0 of 58
            Pseudo Genes (incomplete)         :: 57 of 58
            Pseudo Genes (internal stop)      :: 1 of 58
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1898789
                     /organism="Synechococcus sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-m2-bin114280-MOSTE-SM-03aug20."
                     /isolation_source="Most lake"
                     /db_xref="taxon:1131"
                     /environmental_sample
                     /geo_loc_name="Czechia"
                     /collection_date="2020-08-03"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBAKVD010000001-CBAKVD010000143
WGS_SCAFLD  NZ_CBAKVD010000001-NZ_CBAKVD010000143
//
LOCUS       NZ_AJUD01000000      2538059 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Thermoanaerobacter siderophilus SR4, whole genome shotgun
            sequencing project.
ACCESSION   NZ_AJUD00000000
VERSION     NZ_AJUD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02261414
            Assembly: GCF_000262445.1
KEYWORDS    WGS; GSC:MIGS:2.1; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Thermoanaerobacter siderophilus SR4
  ORGANISM  Thermoanaerobacter siderophilus SR4
            Bacteria; Bacillati; Bacillota; Clostridia; Thermoanaerobacterales;
            Thermoanaerobacteraceae; Thermoanaerobacter.
REFERENCE   1  (bases 1 to 2538059)
  AUTHORS   Lucas,S., Han,J., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S.,
            Peters,L., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L.,
            Kyrpides,N., Ivanova,N., Pagani,I., Hemme,C. and Woyke,T.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Improved High-Quality Draft sequence of Thermoanaerobacter
            siderophilus SR4
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2538059)
  AUTHORS   Lucas,S., Han,J., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S.,
            Peters,L., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L.,
            Kyrpides,N., Ivanova,N., Pagani,I., Hemme,C. and Woyke,T.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (09-FEB-2012) US DOE Joint Genome Institute, 2800
            Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AJUD00000000.1.
            The Thermoanaerobacter siderophilus SR4 whole genome shotgun (WGS)
            project has the project accession NZ_AJUD00000000.  This version of
            the project (01) has the accession number NZ_AJUD01000000, and
            consists of sequences AJUD01000001-AJUD01000022.
            URL -- http://www.jgi.doe.gov
            JGI Project ID: 4086321
            Source DNA and organism available from Christopher Hemme
            (hemmecl@ou.edu)
            Contacts: Christopher Hemme (hemmecl@ou.edu)
                      Tanja Woyke (microbe@cuba.jgi-psf.org)
            Annotation done by JGI-ORNL and JGI-PGF
            Finishing done by JGI-LANL
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376).
            
            ##MIGS-Data-START##
            investigation_type  :: bacteria_archaea
            project_name        :: Thermoanaerobacter siderophilus SR4
            collection_date     :: 1999
            lat_lon             :: 54.095 159.427
            depth               :: Missing
            alt_elev            :: Missing
            country             :: Russia
            environment         :: Fresh water
            num_replicons       :: Missing
            ref_biomaterial     :: DSM 12299, SR4
            biotic_relationship :: Free living
            trophic_level       :: Missing
            rel_to_oxygen       :: Anaerobe
            isol_growth_condt   :: Missing
            sequencing_meth     :: WGS
            assembly            :: Newbler v. 2.3 (pre-release)
            finishing_strategy  :: Improved High-Quality Draft
            GOLD Stamp ID       :: Gi07600
            Type Strain         :: Yes
            Funding Program     :: DOEM 2007
            Isolation Site      :: Hydrothermal vent
            Isolation Comments  :: isolated by Slobodkin et al
            Cell Shape          :: Rod-shaped
            Motility            :: Motile
            Sporulation         :: Sporulating
            Temperature Range   :: Thermophile
            Temperature Optimum :: 70C
            pH                  :: 6.5-6.8
            Gram Staining       :: Gram+
            Diseases            :: None
            ##MIGS-Data-END##
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: Newbler v. 2.3
            Genome Coverage          :: 30x
            Sequencing Technology    :: 454; Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000262445.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:01:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,629
            CDSs (total)                      :: 2,560
            Genes (coding)                    :: 2,255
            CDSs (with protein)               :: 2,255
            Genes (RNA)                       :: 69
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 305
            CDSs (without protein)            :: 305
            Pseudo Genes (ambiguous residues) :: 0 of 305
            Pseudo Genes (frameshifted)       :: 275 of 305
            Pseudo Genes (incomplete)         :: 47 of 305
            Pseudo Genes (internal stop)      :: 14 of 305
            Pseudo Genes (multiple problems)  :: 27 of 305
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2538059
                     /organism="Thermoanaerobacter siderophilus SR4"
                     /mol_type="genomic DNA"
                     /strain="SR4"
                     /isolation_source="hydrothermal vent"
                     /type_material="type strain of Thermoanaerobacter
                     siderophilus"
                     /db_xref="taxon:880478"
                     /geo_loc_name="Russia"
                     /lat_lon="54.095 N 159.427 E"
                     /collection_date="1999"
WGS         AJUD01000001-AJUD01000022
WGS_SCAFLD  NZ_CM001486
//
LOCUS       NZ_VXCD01000000      7985699 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces parvus strain NRRL B-1455, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VXCD00000000
VERSION     NZ_VXCD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12734737
            Assembly: GCF_008632535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces parvus
  ORGANISM  Streptomyces parvus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 7985699)
  AUTHORS   Gonzalez-Pimentel,J.L.
  TITLE     Streptomyces parvus NRRL B-1455 draft genome assembly
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7985699)
  AUTHORS   Gonzalez-Pimentel,J.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-SEP-2019) Agroquimica, Microbiologia Ambiental y
            Conservacion de Suelos, Instituto de Recursos Naturales y
            Agrobiologia, Av. Reina Mercedes 10, Sevilla 41012, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VXCD00000000.1.
            The Streptomyces parvus whole genome shotgun (WGS) project has the
            project accession NZ_VXCD00000000.  This version of the project
            (01) has the accession number NZ_VXCD01000000, and consists of
            sequences VXCD01000001-VXCD01000546.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 30.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_008632535.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:17:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,403
            CDSs (total)                      :: 7,318
            Genes (coding)                    :: 6,986
            CDSs (with protein)               :: 6,986
            Genes (RNA)                       :: 85
            rRNAs                             :: 6, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 332
            CDSs (without protein)            :: 332
            Pseudo Genes (ambiguous residues) :: 0 of 332
            Pseudo Genes (frameshifted)       :: 51 of 332
            Pseudo Genes (incomplete)         :: 300 of 332
            Pseudo Genes (internal stop)      :: 10 of 332
            Pseudo Genes (multiple problems)  :: 28 of 332
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7985699
                     /organism="Streptomyces parvus"
                     /mol_type="genomic DNA"
                     /strain="NRRL B-1455"
                     /isolation_source="garden soil"
                     /type_material="type strain of Streptomyces parvus"
                     /db_xref="taxon:66428"
                     /collection_date="1914"
WGS         VXCD01000001-VXCD01000546
WGS_SCAFLD  NZ_VXCD01000001-NZ_VXCD01000546
//
LOCUS       NZ_ALDL01000000      4084542 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Vibrio cholerae HC-20A2, whole genome shotgun sequencing project.
ACCESSION   NZ_ALDL00000000
VERSION     NZ_ALDL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02435820
            Assembly: GCF_000279415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae HC-20A2
  ORGANISM  Vibrio cholerae HC-20A2
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4084542)
  AUTHORS   Eppinger,M., Hasan,N.A., Sengamalay,N., Hine,E., Su,Q.,
            Daugherty,S.C., Choi,S.Y., Sadzewicz,L., Tallon,L., Cebula,T.A.,
            Ravel,J. and Colwell,R.R.
  TITLE     Genome sequence of Vibrio Cholerae HC-20A2
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4084542)
  AUTHORS   Eppinger,M., Hasan,N.A., Sengamalay,N., Hine,E., Su,Q.,
            Daugherty,S.C., Choi,S.Y., Sadzewicz,L., Tallon,L., Cebula,T.A.,
            Ravel,J. and Colwell,R.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2012) Institute for Genome Sciences, University
            of Maryland School of Medicine, 801 W. Baltimore St, Baltimore, MD
            21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ALDL00000000.1.
            The Vibrio cholerae HC-20A2 whole genome shotgun (WGS) project has
            the project accession NZ_ALDL00000000.  This version of the project
            (01) has the accession number NZ_ALDL01000000, and consists of
            sequences ALDL01000001-ALDL01000027.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Celera Assembler v. 6.1
            Genome Coverage       :: 52.33x
            Sequencing Technology :: Illumina; 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000279415.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:13:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,765
            CDSs (total)                      :: 3,635
            Genes (coding)                    :: 3,576
            CDSs (with protein)               :: 3,576
            Genes (RNA)                       :: 130
            rRNAs                             :: 7, 8, 12 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 10 (16S, 23S)
            tRNAs                             :: 99
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 25 of 59
            Pseudo Genes (incomplete)         :: 34 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 10 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4084542
                     /organism="Vibrio cholerae HC-20A2"
                     /mol_type="genomic DNA"
                     /strain="HC-20A2"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:991932"
                     /geo_loc_name="Haiti"
                     /collection_date="2010"
WGS         ALDL01000001-ALDL01000027
WGS_SCAFLD  NZ_ALDL01000001-NZ_ALDL01000027
//
LOCUS       NZ_CBBJMF010000000   1637004 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Synechococcus sp. isolate
            PELAGICS-MAG-x7-bin061171-MEDDH-LM-15apr20., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBBJMF000000000
VERSION     NZ_CBBJMF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117451432
            Assembly: GCF_964900725.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Synechococcus sp. (freshwater metagenome)
  ORGANISM  Synechococcus sp.
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Synechococcaceae; Synechococcus.
REFERENCE   1  (bases 1 to 1637004)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JAN-2025) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBBJMF000000000.1.
            The Synechococcus sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBBJMF000000000.  This version of the project
            (01) has the accession number NZ_CBBJMF010000000, and consists of
            sequences CBBJMF010000001-CBBJMF010000113.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964900725.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:18:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,884
            CDSs (total)                      :: 1,846
            Genes (coding)                    :: 1,796
            CDSs (with protein)               :: 1,796
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 0 of 50
            Pseudo Genes (incomplete)         :: 49 of 50
            Pseudo Genes (internal stop)      :: 1 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1637004
                     /organism="Synechococcus sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-x7-bin061171-MEDDH-LM-15apr20."
                     /isolation_source="Medard lake"
                     /db_xref="taxon:1131"
                     /environmental_sample
                     /geo_loc_name="Czechia"
                     /collection_date="2020-04-15"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBBJMF010000001-CBBJMF010000113
WGS_SCAFLD  NZ_CBBJMF010000001-NZ_CBBJMF010000113
//
LOCUS       NZ_FUWR01000000      3570629 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Trichlorobacter thiogenes strain ATCC BAA-34, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FUWR00000000
VERSION     NZ_FUWR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02745119
            Assembly: GCF_900167465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Trichlorobacter thiogenes
  ORGANISM  Trichlorobacter thiogenes
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Trichlorobacter.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2017) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FUWR00000000.1.
            The Trichlorobacter thiogenes whole genome shotgun (WGS) project
            has the project accession NZ_FUWR00000000.  This version of the
            project (01) has the accession number NZ_FUWR01000000, and consists
            of sequences FUWR01000001-FUWR01000042.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900167465.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:42:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,365
            CDSs (total)                      :: 3,304
            Genes (coding)                    :: 3,284
            CDSs (with protein)               :: 3,284
            Genes (RNA)                       :: 61
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 2 of 20
            Pseudo Genes (incomplete)         :: 17 of 20
            Pseudo Genes (internal stop)      :: 2 of 20
            Pseudo Genes (multiple problems)  :: 1 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3570629
                     /organism="Trichlorobacter thiogenes"
                     /mol_type="genomic DNA"
                     /strain="ATCC BAA-34"
                     /type_material="type strain of Trichlorobacter thiogenes"
                     /db_xref="taxon:115783"
                     /geo_loc_name="USA:Muskegon County, MI"
WGS         FUWR01000001-FUWR01000042
WGS_SCAFLD  NZ_FUWR01000001-NZ_FUWR01000042
//
LOCUS       NZ_MUZR01000000      2870690 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Thioalkalivibrio halophilus strain HL17, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MUZR00000000
VERSION     NZ_MUZR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06317462
            Assembly: GCF_001995255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Thioalkalivibrio halophilus
  ORGANISM  Thioalkalivibrio halophilus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.
REFERENCE   1  (bases 1 to 2870690)
  AUTHORS   Ahn,A.-C., Meier-Kolthoff,J., Overmars,L., Richter,M., Woyke,T.,
            Sorokin,D.Y. and Muyzer,G.
  TITLE     Genomic diversity within the haloalkaliphilic genus
            Thioalkalivibrio
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2870690)
  AUTHORS   Ahn,A.-C., Balkema,C. and Muyzer,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-FEB-2017) Freshwater and Marine Ecology, University
            of Amsterdam, Science Park 904, Amsterdam 1098 XH, Netherlands
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MUZR00000000.1.
            The Thioalkalivibrio halophilus whole genome shotgun (WGS) project
            has the project accession NZ_MUZR00000000.  This version of the
            project (01) has the accession number NZ_MUZR01000000, and consists
            of sequences MUZR01000001-MUZR01000097.
            Bacteria and source DNA available from Gerard Muyzer, University of
            Amsterdam, Science Park 904, 1098 XH, Amsterdam, Netherlands.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8.0
            Assembly Name          :: Tv_HL17_v1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 61.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001995255.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:53:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,810
            CDSs (total)                      :: 2,758
            Genes (coding)                    :: 2,690
            CDSs (with protein)               :: 2,690
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 17 of 68
            Pseudo Genes (incomplete)         :: 53 of 68
            Pseudo Genes (internal stop)      :: 0 of 68
            Pseudo Genes (multiple problems)  :: 2 of 68
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2870690
                     /organism="Thioalkalivibrio halophilus"
                     /mol_type="genomic DNA"
                     /strain="HL17"
                     /isolation_source="sediment surface and water"
                     /type_material="type strain of Thioalkalivibrio
                     halophilus"
                     /db_xref="taxon:252474"
                     /geo_loc_name="Russia: Siberia"
                     /lat_lon="51.6664 N 79.805 E"
WGS         MUZR01000001-MUZR01000097
WGS_SCAFLD  NZ_MUZR01000001-NZ_MUZR01000097
//
LOCUS       NZ_MPZV01000000      4131279 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Thioclava sediminum strain TAW-CT134, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MPZV00000000
VERSION     NZ_MPZV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05972914
            Assembly: GCF_002020355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Thioclava sediminum
  ORGANISM  Thioclava sediminum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Thioclava.
REFERENCE   1  (bases 1 to 4131279)
  AUTHORS   Liu,Y. and Shao,Z.
  TITLE     A multilocus sequence analysis scheme for characterization of
            bacteria in the genus Thioclava
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4131279)
  AUTHORS   Liu,Y. and Shao,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-NOV-2016) State of Oceanic Administration, The Third
            Institute of Oceanography, Room 116, Daxue Road 178#, Xiamen,
            Fujian 361005, P.R. China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MPZV00000000.1.
            The Thioclava sediminum whole genome shotgun (WGS) project has the
            project accession NZ_MPZV00000000.  This version of the project
            (01) has the accession number NZ_MPZV01000000, and consists of
            sequences MPZV01000001-MPZV01000008.
            Bacteria and source DNA available from Thioclava sp. TAW-CT134
            (MCCC 1A10143) is available from MCCC (Marine Culture Collection of
            China) (http://www.mccc.org.cn/).
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 1.05
            Genome Coverage       :: 100x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002020355.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:04:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,967
            CDSs (total)                      :: 3,915
            Genes (coding)                    :: 3,894
            CDSs (with protein)               :: 3,894
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 10 of 21
            Pseudo Genes (incomplete)         :: 18 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 9 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4131279
                     /organism="Thioclava sediminum"
                     /mol_type="genomic DNA"
                     /strain="TAW-CT134"
                     /isolation_source="Sediment"
                     /culture_collection="MCCC:1A10143"
                     /type_material="type strain of Thioclava sediminum"
                     /db_xref="taxon:1915319"
                     /geo_loc_name="China: Xiamen Island, Tongan Bay"
                     /collection_date="2013-04"
WGS         MPZV01000001-MPZV01000008
WGS_SCAFLD  NZ_MPZV01000001-NZ_MPZV01000008
//
LOCUS       NZ_PRDA01000000      2260964 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Thermus tenuipuniceus strain YIM 76954, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PRDA00000000
VERSION     NZ_PRDA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08389694
            Assembly: GCF_002964845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Thermus tenuipuniceus
  ORGANISM  Thermus tenuipuniceus
            Bacteria; Thermotogati; Deinococcota; Deinococci; Thermales;
            Thermaceae; Thermus.
REFERENCE   1  (bases 1 to 2260964)
  AUTHORS   Zhou,E.-M., Jiao,J.-Y., Xian,W.-D., Liu,L., Zhao,J., Zhou,Y.,
            Xiao,M. and Li,W.-J.
  TITLE     Physiological and Genomic characters of Thermus spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2260964)
  AUTHORS   Zhou,E.-M., Jiao,J.-Y., Xian,W.-D., Liu,L., Zhao,J., Zhou,Y.,
            Xiao,M. and Li,W.-J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-FEB-2018) School of Life Science, Sun Yat-Sen
            University, No. 135, Xingang West Road, Guangzhou, Guangdong
            510275, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PRDA00000000.1.
            The Thermus tenuipuniceus whole genome shotgun (WGS) project has
            the project accession NZ_PRDA00000000.  This version of the project
            (01) has the accession number NZ_PRDA01000000, and consists of
            sequences PRDA01000001-PRDA01000097.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Expected Final Version :: yes
            Genome Coverage        :: 510.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002964845.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:25:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,440
            CDSs (total)                      :: 2,382
            Genes (coding)                    :: 2,313
            CDSs (with protein)               :: 2,313
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 1 (16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 25 of 69
            Pseudo Genes (incomplete)         :: 53 of 69
            Pseudo Genes (internal stop)      :: 4 of 69
            Pseudo Genes (multiple problems)  :: 12 of 69
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2260964
                     /organism="Thermus tenuipuniceus"
                     /mol_type="genomic DNA"
                     /strain="YIM 76954"
                     /isolation_source="hot spring"
                     /type_material="type strain of Thermus tenuipuniceus"
                     /db_xref="taxon:2078690"
                     /geo_loc_name="China: Rehai Geothermal Area"
                     /collection_date="2012-09-01"
WGS         PRDA01000001-PRDA01000097
WGS_SCAFLD  NZ_KZ672956-NZ_KZ672981
WGS_SCAFLD  NZ_PRDA01000003
WGS_SCAFLD  NZ_PRDA01000007
WGS_SCAFLD  NZ_PRDA01000010
WGS_SCAFLD  NZ_PRDA01000015
WGS_SCAFLD  NZ_PRDA01000018-NZ_PRDA01000019
WGS_SCAFLD  NZ_PRDA01000024-NZ_PRDA01000025
WGS_SCAFLD  NZ_PRDA01000030
WGS_SCAFLD  NZ_PRDA01000033-NZ_PRDA01000034
WGS_SCAFLD  NZ_PRDA01000039
WGS_SCAFLD  NZ_PRDA01000042-NZ_PRDA01000043
WGS_SCAFLD  NZ_PRDA01000050
WGS_SCAFLD  NZ_PRDA01000053
WGS_SCAFLD  NZ_PRDA01000062
WGS_SCAFLD  NZ_PRDA01000065
WGS_SCAFLD  NZ_PRDA01000070-NZ_PRDA01000073
WGS_SCAFLD  NZ_PRDA01000076-NZ_PRDA01000088
WGS_SCAFLD  NZ_PRDA01000091-NZ_PRDA01000092
WGS_SCAFLD  NZ_PRDA01000095-NZ_PRDA01000097
//
LOCUS       NZ_SRRU01000000      6843258 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces griseoluteus strain JCM 4765, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SRRU00000000
VERSION     NZ_SRRU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11349273
            Assembly: GCF_004784465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces griseoluteus
  ORGANISM  Streptomyces griseoluteus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 6843258)
  AUTHORS   Kanchanasin,P., Tanasupawat,S., Yuki,M. and Kudo,T.
  TITLE     Streptomyces sp. nov. Bv016 isolated from bark of Buahinia
            variegata
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6843258)
  AUTHORS   Kanchanasin,P., Tanasupawat,S., Yuki,M. and Kudo,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-APR-2019) Biochemistry and Microbiology, Faculty of
            Pharmaceutical Sciences, Chulalongkorn University, 254 Phyathai
            Rd., Bangkok 10330, Thailand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SRRU00000000.1.
            The Streptomyces griseoluteus whole genome shotgun (WGS) project
            has the project accession NZ_SRRU00000000.  This version of the
            project (01) has the accession number NZ_SRRU01000000, and consists
            of sequences SRRU01000001-SRRU01000022.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 500x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004784465.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:28:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,404
            CDSs (total)                      :: 6,325
            Genes (coding)                    :: 6,148
            CDSs (with protein)               :: 6,148
            Genes (RNA)                       :: 79
            rRNAs                             :: 6, 2 (5S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 2, 2 (5S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 177
            CDSs (without protein)            :: 177
            Pseudo Genes (ambiguous residues) :: 0 of 177
            Pseudo Genes (frameshifted)       :: 48 of 177
            Pseudo Genes (incomplete)         :: 146 of 177
            Pseudo Genes (internal stop)      :: 21 of 177
            Pseudo Genes (multiple problems)  :: 35 of 177
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6843258
                     /organism="Streptomyces griseoluteus"
                     /mol_type="genomic DNA"
                     /strain="JCM 4765"
                     /isolation_source="soil"
                     /type_material="type strain of Streptomyces griseoluteus"
                     /db_xref="taxon:29306"
                     /geo_loc_name="Japan"
                     /collection_date="1950-04-01"
WGS         SRRU01000001-SRRU01000022
WGS_SCAFLD  NZ_SRRU01000001-NZ_SRRU01000022
//
LOCUS       NZ_FNVG01000000      5123217 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Vibrio hangzhouensis strain CGMCC 1.7062, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNVG00000000
VERSION     NZ_FNVG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04488244
            Assembly: GCF_900107935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio hangzhouensis
  ORGANISM  Vibrio hangzhouensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNVG00000000.1.
            The Vibrio hangzhouensis whole genome shotgun (WGS) project has the
            project accession NZ_FNVG00000000.  This version of the project
            (01) has the accession number NZ_FNVG01000000, and consists of
            sequences FNVG01000001-FNVG01000060.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900107935.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:42:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,687
            CDSs (total)                      :: 4,618
            Genes (coding)                    :: 4,572
            CDSs (with protein)               :: 4,572
            Genes (RNA)                       :: 69
            rRNAs                             :: 2, 6, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 6, 1 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 8 of 46
            Pseudo Genes (incomplete)         :: 41 of 46
            Pseudo Genes (internal stop)      :: 8 of 46
            Pseudo Genes (multiple problems)  :: 9 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5123217
                     /organism="Vibrio hangzhouensis"
                     /mol_type="genomic DNA"
                     /strain="CGMCC 1.7062"
                     /type_material="type strain of Vibrio hangzhouensis"
                     /db_xref="taxon:462991"
WGS         FNVG01000001-FNVG01000060
WGS_SCAFLD  NZ_FNVG01000001-NZ_FNVG01000060
//
LOCUS       NZ_CBBIWX010000000   1827898 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Synechococcus sp. isolate
            PELAGICS-MAG-x7-bin055207-FANTE-SM-30jul21., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBBIWX000000000
VERSION     NZ_CBBIWX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117452540
            Assembly: GCF_964896865.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Synechococcus sp. (freshwater metagenome)
  ORGANISM  Synechococcus sp.
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Synechococcaceae; Synechococcus.
REFERENCE   1  (bases 1 to 1827898)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JAN-2025) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBBIWX000000000.1.
            The Synechococcus sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBBIWX000000000.  This version of the project
            (01) has the accession number NZ_CBBIWX010000000, and consists of
            sequences CBBIWX010000001-CBBIWX010000162.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964896865.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:35:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,098
            CDSs (total)                      :: 2,061
            Genes (coding)                    :: 2,007
            CDSs (with protein)               :: 2,007
            Genes (RNA)                       :: 37
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 1 of 54
            Pseudo Genes (incomplete)         :: 53 of 54
            Pseudo Genes (internal stop)      :: 0 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827898
                     /organism="Synechococcus sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-x7-bin055207-FANTE-SM-30jul21."
                     /isolation_source="Fantanele reservoir"
                     /db_xref="taxon:1131"
                     /environmental_sample
                     /geo_loc_name="Romania"
                     /collection_date="2021-07-30"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBBIWX010000001-CBBIWX010000162
WGS_SCAFLD  NZ_CBBIWX010000001-NZ_CBBIWX010000162
//
LOCUS       NZ_JPWA01000000      5169665 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Thalassospira xianhensis MCCC 1A02616, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JPWA00000000
VERSION     NZ_JPWA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02927976
            Assembly: GCF_003326475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Thalassospira xianhensis MCCC 1A02616
  ORGANISM  Thalassospira xianhensis MCCC 1A02616
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodospirillales; Thalassospiraceae; Thalassospira.
REFERENCE   1  (bases 1 to 5169665)
  AUTHORS   Lai,Q. and Shao,Z.
  TITLE     Draft genome sequence of Thalassospira xianhensis P-4 (MCCC
            1A02616)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5169665)
  AUTHORS   Lai,Q. and Shao,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-JUL-2014) The Third Institute of Oceanography, State
            of Oceanic Administration (SOA), Daxue Road 178#, Xiamen, Fujian
            361005, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JPWA00000000.1.
            The Thalassospira xianhensis MCCC 1A02616 whole genome shotgun
            (WGS) project has the project accession NZ_JPWA00000000.  This
            version of the project (01) has the accession number
            NZ_JPWA01000000, and consists of sequences
            JPWA01000001-JPWA01000100.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 1.05
            Genome Coverage       :: 100x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003326475.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:58:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,950
            CDSs (total)                      :: 4,844
            Genes (coding)                    :: 4,813
            CDSs (with protein)               :: 4,813
            Genes (RNA)                       :: 106
            rRNAs                             :: 1, 3 (16S, 23S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 97
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 0 of 31
            Pseudo Genes (incomplete)         :: 30 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            Pseudo Genes (multiple problems)  :: 1 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5169665
                     /organism="Thalassospira xianhensis MCCC 1A02616"
                     /mol_type="genomic DNA"
                     /strain="MCCC 1A02616"
                     /isolation_source="oil-polluted saline soil"
                     /culture_collection="MCCC:1A02616"
                     /type_material="type strain of Thalassospira xianhensis"
                     /db_xref="taxon:1177929"
                     /geo_loc_name="China: Shandong"
                     /collection_date="2010"
WGS         JPWA01000001-JPWA01000100
WGS_SCAFLD  NZ_JPWA01000001-NZ_JPWA01000100
//
LOCUS       NZ_VFNX01000000      9146138 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces puniciscabiei strain DSM 41929, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VFNX00000000
VERSION     NZ_VFNX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11512345
            Assembly: GCF_006715785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces puniciscabiei
  ORGANISM  Streptomyces puniciscabiei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 9146138)
  AUTHORS   Klenk,H.-P.
  TITLE     Sequencing the genomes of 1000 actinobacteria strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 9146138)
  AUTHORS   Klenk,H.-P., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-JUN-2019) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VFNX00000000.1.
            The Streptomyces puniciscabiei whole genome shotgun (WGS) project
            has the project accession NZ_VFNX00000000.  This version of the
            project (01) has the accession number NZ_VFNX01000000, and consists
            of sequences VFNX01000001-VFNX01000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. smrtlink/6.0.0.47835, HGAP 4
                                      (0.2.1)
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 469.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006715785.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:55:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,501
            CDSs (total)                      :: 8,405
            Genes (coding)                    :: 8,095
            CDSs (with protein)               :: 8,095
            Genes (RNA)                       :: 96
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 313
            CDSs (without protein)            :: 310
            Pseudo Genes (ambiguous residues) :: 0 of 313
            Pseudo Genes (frameshifted)       :: 130 of 313
            Pseudo Genes (incomplete)         :: 246 of 313
            Pseudo Genes (internal stop)      :: 33 of 313
            Pseudo Genes (multiple problems)  :: 86 of 313
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9146138
                     /organism="Streptomyces puniciscabiei"
                     /mol_type="genomic DNA"
                     /strain="DSM 41929"
                     /culture_collection="DSM:41929"
                     /type_material="type strain of Streptomyces puniciscabiei"
                     /db_xref="taxon:164348"
WGS         VFNX01000001-VFNX01000009
WGS_SCAFLD  NZ_VFNX01000001-NZ_VFNX01000009
//
LOCUS       NZ_VZPY01000000      4580125 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Vibrio kanaloae strain CCUG 56968, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VZPY00000000
VERSION     NZ_VZPY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12697599
            Assembly: GCF_008801285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio kanaloae
  ORGANISM  Vibrio kanaloae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4580125)
  AUTHORS   Tunovic,T., Pineiro-Iglesias,B., Unosson,C., Inganas,E., Ohlen,M.,
            Cardew,S., Jensie-Markopoulos,S., Salva-Serra,F., Jaen-Luchoro,D.,
            Karlsson,R., Svensson-Stadler,L., Chun,J. and Moore,E.
  TITLE     Draft genome sequences of 48 bacterial type strains from the CCUG
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4580125)
  AUTHORS   Tunovic,T., Pineiro-Iglesias,B., Unosson,C., Inganas,E., Ohlen,M.,
            Cardew,S., Jensie-Markopoulos,S., Salva-Serra,F., Jaen-Luchoro,D.,
            Karlsson,R., Svensson-Stadler,L., Chun,J. and Moore,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2019) Infectious Diseases, University of
            Gothenburg - CCUG, Guldhedsgatan 10, Box 7193, Gothenburg, Vastra
            Gotaland 40234, Sweden
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VZPY00000000.1.
            The Vibrio kanaloae whole genome shotgun (WGS) project has the
            project accession NZ_VZPY00000000.  This version of the project
            (01) has the accession number NZ_VZPY01000000, and consists of
            sequences VZPY01000001-VZPY01000073.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 113.06x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_008801285.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:42:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,141
            CDSs (total)                      :: 3,998
            Genes (coding)                    :: 3,941
            CDSs (with protein)               :: 3,941
            Genes (RNA)                       :: 143
            rRNAs                             :: 10, 12, 14 (5S, 16S, 23S)
            complete rRNAs                    :: 10, 1 (5S, 16S)
            partial rRNAs                     :: 11, 14 (16S, 23S)
            tRNAs                             :: 103
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 23 of 57
            Pseudo Genes (incomplete)         :: 43 of 57
            Pseudo Genes (internal stop)      :: 10 of 57
            Pseudo Genes (multiple problems)  :: 16 of 57
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4580125
                     /organism="Vibrio kanaloae"
                     /mol_type="genomic DNA"
                     /strain="CCUG 56968"
                     /isolation_source="diseased oyster larvae"
                     /host="Ostrea edulis"
                     /culture_collection="CCUG:56968"
                     /type_material="type strain of Vibrio kanaloae"
                     /db_xref="taxon:170673"
                     /geo_loc_name="France"
WGS         VZPY01000001-VZPY01000073
WGS_SCAFLD  NZ_VZPY01000001-NZ_VZPY01000073
//
LOCUS       NZ_JBWXHF010000000   3518842 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Thermincola carboxydiphila strain DSM 17129 isolate 2204, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JBWXHF000000000
VERSION     NZ_JBWXHF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56455830
            Assembly: GCF_056856095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Thermincola carboxydiphila
  ORGANISM  Thermincola carboxydiphila
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Thermincolaceae; Thermincola.
REFERENCE   1  (bases 1 to 3518842)
  AUTHORS   Boeer,T., Rosenbaum,F.P., Mueller,V., Daniel,R. and Poehlein,A.
  TITLE     Closed genome sequence of Thermincola carboxydiphila DSM 17129T
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3518842)
  AUTHORS   Boeer,T., Rosenbaum,F.P., Mueller,V., Daniel,R. and Poehlein,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-APR-2026) Genomic and Applied Microbiology &
            Goettingen Genomics Laboratory, Georg-August-University Goettingen,
            Grisebachstr. 8, Goettingen, Lower Saxony 37077, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWXHF000000000.1.
            The Thermincola carboxydiphila whole genome shotgun (WGS) project
            has the project accession NZ_JBWXHF000000000.  This version of the
            project (01) has the accession number NZ_JBWXHF010000000, and
            consists of sequence JBWXHF010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from DSMZ Braunschweig.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Trycycler v. v0.5.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 449.0x
            Sequencing Technology  :: Illumina MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856095.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:06:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,490
            CDSs (total)                      :: 3,425
            Genes (coding)                    :: 3,386
            CDSs (with protein)               :: 3,386
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 14 of 39
            Pseudo Genes (incomplete)         :: 28 of 39
            Pseudo Genes (internal stop)      :: 9 of 39
            Pseudo Genes (multiple problems)  :: 10 of 39
            CRISPR Arrays                     :: 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3518842
                     /organism="Thermincola carboxydiphila"
                     /mol_type="genomic DNA"
                     /strain="DSM 17129"
                     /isolate="2204"
                     /isolation_source="hot spring, Russian Federation Baikal
                     Lake region"
                     /culture_collection="DSM:17129"
                     /type_material="type strain of Thermincola carboxydiphila"
                     /db_xref="taxon:278994"
                     /geo_loc_name="Russia: Baikal Lake region"
                     /collection_date="1996-07"
WGS         JBWXHF010000001
WGS_SCAFLD  NZ_CM166461
//
LOCUS       NZ_JBMYHI010000000  10048055 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces fractus strain MV32, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBMYHI000000000
VERSION     NZ_JBMYHI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47849728
            Assembly: GCF_049844455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces fractus
  ORGANISM  Streptomyces fractus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 10048055)
  AUTHORS   Kaltenpoth,M. and Vogel,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-APR-2025) Entomology and Nematology, University of
            California Davis, 1 Shields Ave, Davis, CA 95616, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBMYHI000000000.1.
            The Streptomyces fractus whole genome shotgun (WGS) project has the
            project accession NZ_JBMYHI000000000.  This version of the project
            (01) has the accession number NZ_JBMYHI010000000, and consists of
            sequences JBMYHI010000001-JBMYHI010000003.
            Bacteria and source DNA available from USDA-ARS Collection: NRRL
            B-59159.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1100.0x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049844455.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:46:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 9,160
            CDSs (total)                      :: 9,066
            Genes (coding)                    :: 8,852
            CDSs (with protein)               :: 8,852
            Genes (RNA)                       :: 94
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 214
            CDSs (without protein)            :: 214
            Pseudo Genes (ambiguous residues) :: 0 of 214
            Pseudo Genes (frameshifted)       :: 90 of 214
            Pseudo Genes (incomplete)         :: 143 of 214
            Pseudo Genes (internal stop)      :: 14 of 214
            Pseudo Genes (multiple problems)  :: 31 of 214
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10048055
                     /organism="Streptomyces fractus"
                     /mol_type="genomic DNA"
                     /strain="MV32"
                     /isolation_source="gut"
                     /host="Amitermes hastatus"
                     /type_material="type strain of Streptomyces fractus"
                     /db_xref="taxon:641806"
                     /geo_loc_name="South Africa: Tygerberg Nature Reserve,
                     Cape Town"
                     /lat_lon="33.877605 S 18.599796 E"
                     /collection_date="2014"
WGS         JBMYHI010000001-JBMYHI010000003
WGS_SCAFLD  NZ_JBMYHI010000001-NZ_JBMYHI010000003
//
LOCUS       NZ_JBNCLM010000000   7889925 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces globisporus strain DT70, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNCLM000000000
VERSION     NZ_JBNCLM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN46229747
            Assembly: GCF_049844675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces globisporus
  ORGANISM  Streptomyces globisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 7889925)
  AUTHORS   Tellatin,D. and Rigali,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2025) InBioS - CIP, University of Liege, Allee du
            Six Aout, 13, Liege 4000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCLM000000000.1.
            The Streptomyces globisporus whole genome shotgun (WGS) project has
            the project accession NZ_JBNCLM000000000.  This version of the
            project (01) has the accession number NZ_JBNCLM010000000, and
            consists of sequences JBNCLM010000001-JBNCLM010000046.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 53x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049844675.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:47:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,131
            CDSs (total)                      :: 7,050
            Genes (coding)                    :: 6,885
            CDSs (with protein)               :: 6,885
            Genes (RNA)                       :: 81
            rRNAs                             :: 5, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 165
            CDSs (without protein)            :: 165
            Pseudo Genes (ambiguous residues) :: 0 of 165
            Pseudo Genes (frameshifted)       :: 62 of 165
            Pseudo Genes (incomplete)         :: 127 of 165
            Pseudo Genes (internal stop)      :: 9 of 165
            Pseudo Genes (multiple problems)  :: 31 of 165
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7889925
                     /organism="Streptomyces globisporus"
                     /mol_type="genomic DNA"
                     /strain="DT70"
                     /isolation_source="Wax beehive"
                     /db_xref="taxon:1908"
                     /geo_loc_name="Belgium: Comblain-au-Pont"
                     /collection_date="2021-05-14"
WGS         JBNCLM010000001-JBNCLM010000046
WGS_SCAFLD  NZ_JBNCLM010000001-NZ_JBNCLM010000046
//
LOCUS       NZ_JBNCLK010000000   8130987 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces cyaneofuscatus strain DT165, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNCLK000000000
VERSION     NZ_JBNCLK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN46229749
            Assembly: GCF_049844635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces cyaneofuscatus
  ORGANISM  Streptomyces cyaneofuscatus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 8130987)
  AUTHORS   Tellatin,D. and Rigali,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2025) InBioS - CIP, University of Liege, Allee du
            Six Aout, 13, Liege 4000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCLK000000000.1.
            The Streptomyces cyaneofuscatus whole genome shotgun (WGS) project
            has the project accession NZ_JBNCLK000000000.  This version of the
            project (01) has the accession number NZ_JBNCLK010000000, and
            consists of sequences JBNCLK010000001-JBNCLK010000043.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 51x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049844635.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 18:04:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,339
            CDSs (total)                      :: 7,261
            Genes (coding)                    :: 7,162
            CDSs (with protein)               :: 7,162
            Genes (RNA)                       :: 78
            rRNAs                             :: 4, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3, 1, 3 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 99
            CDSs (without protein)            :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 45 of 99
            Pseudo Genes (incomplete)         :: 73 of 99
            Pseudo Genes (internal stop)      :: 4 of 99
            Pseudo Genes (multiple problems)  :: 21 of 99
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8130987
                     /organism="Streptomyces cyaneofuscatus"
                     /mol_type="genomic DNA"
                     /strain="DT165"
                     /isolation_source="Propolis beehive"
                     /db_xref="taxon:66883"
                     /geo_loc_name="Belgium: Comblain-au-Pont"
                     /collection_date="2021-05-14"
WGS         JBNCLK010000001-JBNCLK010000043
WGS_SCAFLD  NZ_JBNCLK010000001-NZ_JBNCLK010000043
//
LOCUS       NZ_JBNCNU010000000   8546816 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces cyaneofuscatus strain DT174, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNCNU000000000
VERSION     NZ_JBNCNU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47951516
            Assembly: GCF_049847145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces cyaneofuscatus
  ORGANISM  Streptomyces cyaneofuscatus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 8546816)
  AUTHORS   Tellatin,D. and Rigali,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2025) InBioS - CIP, University of Liege, Allee du
            Six Aout, 13, Liege 4000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNCNU000000000.1.
            The Streptomyces cyaneofuscatus whole genome shotgun (WGS) project
            has the project accession NZ_JBNCNU000000000.  This version of the
            project (01) has the accession number NZ_JBNCNU010000000, and
            consists of sequences JBNCNU010000001-JBNCNU010000062.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 51x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049847145.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 18:04:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,727
            CDSs (total)                      :: 7,646
            Genes (coding)                    :: 7,498
            CDSs (with protein)               :: 7,498
            Genes (RNA)                       :: 81
            rRNAs                             :: 3, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 148
            CDSs (without protein)            :: 148
            Pseudo Genes (ambiguous residues) :: 0 of 148
            Pseudo Genes (frameshifted)       :: 68 of 148
            Pseudo Genes (incomplete)         :: 88 of 148
            Pseudo Genes (internal stop)      :: 12 of 148
            Pseudo Genes (multiple problems)  :: 18 of 148
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8546816
                     /organism="Streptomyces cyaneofuscatus"
                     /mol_type="genomic DNA"
                     /strain="DT174"
                     /isolation_source="Propolis Beehive"
                     /db_xref="taxon:66883"
                     /geo_loc_name="Belgium: Comblain-au-Pont"
                     /collection_date="2021-05-14"
WGS         JBNCNU010000001-JBNCNU010000062
WGS_SCAFLD  NZ_JBNCNU010000001-NZ_JBNCNU010000062
//
LOCUS       NZ_JBNDMW010000000   8177308 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces griseus strain MR-45, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBNDMW000000000
VERSION     NZ_JBNDMW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47932092
            Assembly: GCF_049856195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces griseus
  ORGANISM  Streptomyces griseus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 8177308)
  AUTHORS   De La Vega,E.
  TITLE     Functional genomics and phenotypic characterization of Streptomyces
            spp. associated with native plants in the traditional Mexican milpa
            agroecosystem
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8177308)
  AUTHORS   De La Vega,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2025) Microbiology, Instituto Politecnico
            Nacional, Manuel Carpio, CDMX 11350, Mexico
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNDMW000000000.1.
            The Streptomyces griseus whole genome shotgun (WGS) project has the
            project accession NZ_JBNDMW000000000.  This version of the project
            (01) has the accession number NZ_JBNDMW010000000, and consists of
            sequences JBNDMW010000001-JBNDMW010000116.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. De novo
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049856195.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 18:32:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,301
            CDSs (total)                      :: 7,227
            Genes (coding)                    :: 7,123
            CDSs (with protein)               :: 7,123
            Genes (RNA)                       :: 74
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 104
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 42 of 105
            Pseudo Genes (incomplete)         :: 76 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 23 of 105
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8177308
                     /organism="Streptomyces griseus"
                     /mol_type="genomic DNA"
                     /strain="MR-45"
                     /isolation_source="rhizosphere"
                     /host="Zea mays"
                     /db_xref="taxon:1911"
                     /geo_loc_name="Mexico"
                     /collection_date="2021-11-24"
WGS         JBNDMW010000001-JBNDMW010000116
WGS_SCAFLD  NZ_JBNDMW010000001-NZ_JBNDMW010000116
//
LOCUS       NZ_JBXFXG010000000   4502623 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Stutzerimonas stutzeri isolate 2B, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXFXG000000000
VERSION     NZ_JBXFXG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN57233078
            Assembly: GCF_056856745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stutzerimonas stutzeri (Pseudomonas stutzeri)
  ORGANISM  Stutzerimonas stutzeri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Stutzerimonas.
REFERENCE   1  (bases 1 to 4502623)
  AUTHORS   Liu,J.
  TITLE     Denitrification Characteristics and Application of Psychrotolerant
            and Alkali-tolerant Bacterium Stutzerimonas stutzeri Strain 2B
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4502623)
  AUTHORS   Liu,J. and Guo,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-APR-2026) agricultural, Hebei Normal University Of
            Science & Technology, changli, Qinghuangdao, Hebei 0666000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXFXG000000000.1.
            The Stutzerimonas stutzeri whole genome shotgun (WGS) project has
            the project accession NZ_JBXFXG000000000.  This version of the
            project (01) has the accession number NZ_JBXFXG010000000, and
            consists of sequence JBXFXG010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Canu v. v1.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 163.0x
            Sequencing Technology  :: DNBSEQ-T7 and PacBio RS II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856745.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:11:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,250
            CDSs (total)                      :: 4,174
            Genes (coding)                    :: 4,135
            CDSs (with protein)               :: 4,135
            Genes (RNA)                       :: 76
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 24 of 39
            Pseudo Genes (incomplete)         :: 20 of 39
            Pseudo Genes (internal stop)      :: 4 of 39
            Pseudo Genes (multiple problems)  :: 8 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4502623
                     /organism="Stutzerimonas stutzeri"
                     /mol_type="genomic DNA"
                     /isolate="2B"
                     /isolation_source="artificial aquatic biome"
                     /db_xref="taxon:316"
                     /geo_loc_name="China: Hebei"
                     /collection_date="2023-07-08"
WGS         JBXFXG010000001
WGS_SCAFLD  NZ_CM166463
//
LOCUS       NZ_JBXEQC010000000   7094917 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces sp. TOM-4, whole genome shotgun sequencing project.
ACCESSION   NZ_JBXEQC000000000
VERSION     NZ_JBXEQC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54760309
            Assembly: GCF_056858615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces sp. TOM-4
  ORGANISM  Streptomyces sp. TOM-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 7094917)
  AUTHORS   Thomaidis,G., Boutzikas,G., Alexopoulos,A. and Zamioudis,C.
  TITLE     Local and Systemic Transcriptional Responses of Tomato to a
            Growth-Promoting Streptomyces Consortium
  JOURNAL   Plants (Basel) 15 (5), 827 (2026)
   PUBMED   41829863
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7094917)
  AUTHORS   Zamioudis,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Department of Agricultural Development,
            Democritus University of Thrace, Pantazidou Str. 193, Orestiada
            68200, Greece
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEQC000000000.1.
            The Streptomyces sp. TOM-4 whole genome shotgun (WGS) project has
            the project accession NZ_JBXEQC000000000.  This version of the
            project (01) has the accession number NZ_JBXEQC010000000, and
            consists of sequences JBXEQC010000001-JBXEQC010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 370x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858615.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:03:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,498
            CDSs (total)                      :: 6,405
            Genes (coding)                    :: 6,284
            CDSs (with protein)               :: 6,284
            Genes (RNA)                       :: 93
            rRNAs                             :: 9, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 121
            Pseudo Genes (ambiguous residues) :: 0 of 121
            Pseudo Genes (frameshifted)       :: 54 of 121
            Pseudo Genes (incomplete)         :: 103 of 121
            Pseudo Genes (internal stop)      :: 6 of 121
            Pseudo Genes (multiple problems)  :: 39 of 121
            CRISPR Arrays                     :: 6
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7094917
                     /organism="Streptomyces sp. TOM-4"
                     /mol_type="genomic DNA"
                     /strain="TOM-4"
                     /isolation_source="rhizosphere"
                     /host="Solanum lycopersicum"
                     /db_xref="taxon:3680931"
                     /geo_loc_name="Greece: Thrace, Orestiada"
                     /collection_date="2023-06"
WGS         JBXEQC010000001-JBXEQC010000002
WGS_SCAFLD  NZ_JBXEQC010000001-NZ_JBXEQC010000002
//
LOCUS       NZ_JBXEQA010000000  10829555 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces melanosporofaciens strain TOM-12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXEQA000000000
VERSION     NZ_JBXEQA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54760311
            Assembly: GCF_056858555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces melanosporofaciens
  ORGANISM  Streptomyces melanosporofaciens
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces; Streptomyces
            violaceusniger group.
REFERENCE   1  (bases 1 to 10829555)
  AUTHORS   Thomaidis,G., Boutzikas,G., Alexopoulos,A. and Zamioudis,C.
  TITLE     Local and Systemic Transcriptional Responses of Tomato to a
            Growth-Promoting Streptomyces Consortium
  JOURNAL   Plants (Basel) 15 (5), 827 (2026)
   PUBMED   41829863
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10829555)
  AUTHORS   Zamioudis,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Department of Agricultural Development,
            Democritus University of Thrace, Pantazidou Str. 193, Orestiada
            68200, Greece
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEQA000000000.1.
            The Streptomyces melanosporofaciens whole genome shotgun (WGS)
            project has the project accession NZ_JBXEQA000000000.  This version
            of the project (01) has the accession number NZ_JBXEQA010000000,
            and consists of sequences JBXEQA010000001-JBXEQA010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 238x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858555.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 16:14:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 9,262
            CDSs (total)                      :: 9,176
            Genes (coding)                    :: 8,842
            CDSs (with protein)               :: 8,842
            Genes (RNA)                       :: 86
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 334
            CDSs (without protein)            :: 334
            Pseudo Genes (ambiguous residues) :: 0 of 334
            Pseudo Genes (frameshifted)       :: 124 of 334
            Pseudo Genes (incomplete)         :: 284 of 334
            Pseudo Genes (internal stop)      :: 19 of 334
            Pseudo Genes (multiple problems)  :: 90 of 334
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10829555
                     /organism="Streptomyces melanosporofaciens"
                     /mol_type="genomic DNA"
                     /strain="TOM-12"
                     /isolation_source="rhizosphere"
                     /host="Solanum lycopersicum"
                     /db_xref="taxon:67327"
                     /geo_loc_name="Greece: Thrace, Orestiada"
                     /collection_date="2023-06"
WGS         JBXEQA010000001-JBXEQA010000002
WGS_SCAFLD  NZ_JBXEQA010000001-NZ_JBXEQA010000002
//
LOCUS       NZ_JACEGK010000000   8226179 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces sp. NH27, whole genome shotgun sequencing project.
ACCESSION   NZ_JACEGK000000000
VERSION     NZ_JACEGK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15569047
            Assembly: GCF_056859195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces sp. NH27
  ORGANISM  Streptomyces sp. NH27
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 8226179)
  AUTHORS   Golinska,P.
  TITLE     Novel species of acidophilic actinobacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8226179)
  AUTHORS   Golinska,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-JUL-2020) Microbiology, Nicolaus Copernicus
            University, Lwowska 1, Torun 87 100, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JACEGK000000000.1.
            The Streptomyces sp. NH27 whole genome shotgun (WGS) project has
            the project accession NZ_JACEGK000000000.  This version of the
            project (01) has the accession number NZ_JACEGK010000000, and
            consists of sequences JACEGK010000001-JACEGK010001148.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.6.2
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 36.5x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859195.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:13:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,688
            CDSs (total)                      :: 7,603
            Genes (coding)                    :: 7,216
            CDSs (with protein)               :: 7,216
            Genes (RNA)                       :: 85
            rRNAs                             :: 5, 3, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            partial rRNAs                     :: 2, 9 (16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 388
            CDSs (without protein)            :: 387
            Pseudo Genes (ambiguous residues) :: 0 of 388
            Pseudo Genes (frameshifted)       :: 47 of 388
            Pseudo Genes (incomplete)         :: 352 of 388
            Pseudo Genes (internal stop)      :: 14 of 388
            Pseudo Genes (multiple problems)  :: 24 of 388
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8226179
                     /organism="Streptomyces sp. NH27"
                     /mol_type="genomic DNA"
                     /strain="NH27"
                     /isolation_source="soil"
                     /db_xref="taxon:2755362"
                     /geo_loc_name="Poland"
                     /collection_date="2013-10"
                     /collected_by="Patrycja Golinska"
                     /identified_by="Patrycja Golinska, Magdalena wiecimska"
WGS         JACEGK010000001-JACEGK010001148
WGS_SCAFLD  NZ_JACEGK010000001-NZ_JACEGK010001148
//
LOCUS       NZ_JBSXOD010000000   4180954 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Sulfitobacter sp. L-8, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXOD000000000
VERSION     NZ_JBSXOD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312057
            Assembly: GCF_056859255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sulfitobacter sp. L-8
  ORGANISM  Sulfitobacter sp. L-8
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Sulfitobacter.
REFERENCE   1  (bases 1 to 4180954)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXOD000000000.1.
            The Sulfitobacter sp. L-8 whole genome shotgun (WGS) project has
            the project accession NZ_JBSXOD000000000.  This version of the
            project (01) has the accession number NZ_JBSXOD010000000, and
            consists of sequences JBSXOD010000001-JBSXOD010000056.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 281.72x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859255.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:20:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,084
            CDSs (total)                      :: 4,036
            Genes (coding)                    :: 3,968
            CDSs (with protein)               :: 3,968
            Genes (RNA)                       :: 48
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 24 of 68
            Pseudo Genes (incomplete)         :: 52 of 68
            Pseudo Genes (internal stop)      :: 13 of 68
            Pseudo Genes (multiple problems)  :: 16 of 68
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4180954
                     /organism="Sulfitobacter sp. L-8"
                     /mol_type="genomic DNA"
                     /strain="L-8"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472676"
                     /geo_loc_name="Indian Ocean: Southwestern Indian Ridge"
                     /lat_lon="37.93805 S 49.26156 E"
                     /collection_date="2024-05"
WGS         JBSXOD010000001-JBSXOD010000056
WGS_SCAFLD  NZ_JBSXOD010000001-NZ_JBSXOD010000056
//
LOCUS       NZ_JBXEQD010000000   8571103 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Streptomyces rubrogriseus strain TOM-3, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXEQD000000000
VERSION     NZ_JBXEQD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54760308
            Assembly: GCF_056858635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces rubrogriseus
  ORGANISM  Streptomyces rubrogriseus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces; Streptomyces
            violaceoruber group.
REFERENCE   1  (bases 1 to 8571103)
  AUTHORS   Thomaidis,G., Boutzikas,G., Alexopoulos,A. and Zamioudis,C.
  TITLE     Local and Systemic Transcriptional Responses of Tomato to a
            Growth-Promoting Streptomyces Consortium
  JOURNAL   Plants (Basel) 15 (5), 827 (2026)
   PUBMED   41829863
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8571103)
  AUTHORS   Zamioudis,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2026) Department of Agricultural Development,
            Democritus University of Thrace, Pantazidou Str. 193, Orestiada
            68200, Greece
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEQD000000000.1.
            The Streptomyces rubrogriseus whole genome shotgun (WGS) project
            has the project accession NZ_JBXEQD000000000.  This version of the
            project (01) has the accession number NZ_JBXEQD010000000, and
            consists of sequences JBXEQD010000001-JBXEQD010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 305x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858635.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 15:31:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,723
            CDSs (total)                      :: 7,635
            Genes (coding)                    :: 7,494
            CDSs (with protein)               :: 7,494
            Genes (RNA)                       :: 88
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 141
            CDSs (without protein)            :: 141
            Pseudo Genes (ambiguous residues) :: 0 of 141
            Pseudo Genes (frameshifted)       :: 59 of 141
            Pseudo Genes (incomplete)         :: 109 of 141
            Pseudo Genes (internal stop)      :: 16 of 141
            Pseudo Genes (multiple problems)  :: 39 of 141
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8571103
                     /organism="Streptomyces rubrogriseus"
                     /mol_type="genomic DNA"
                     /strain="TOM-3"
                     /isolation_source="rhizosphere"
                     /host="Solanum lycopersicum"
                     /db_xref="taxon:194673"
                     /geo_loc_name="Greece: Thrace, Orestiada"
                     /collection_date="2023-06"
WGS         JBXEQD010000001-JBXEQD010000002
WGS_SCAFLD  NZ_JBXEQD010000001-NZ_JBXEQD010000002
//
LOCUS       NZ_ATUW01000000      2270293 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Winkia neuii subsp. neuii DSM 8576, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ATUW00000000
VERSION     NZ_ATUW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02441245
            Assembly: GCF_000420405.1
KEYWORDS    WGS; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Winkia neuii subsp. neuii DSM 8576
  ORGANISM  Winkia neuii subsp. neuii DSM 8576
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae; Winkia.
REFERENCE   1  (bases 1 to 2270293)
  AUTHORS   Kyrpides,N., Huntemann,M., Han,J., Chen,A., Mavromatis,K.,
            Markowitz,V., Palaniappan,K., Ivanova,N., Schaumberg,A., Pati,A.,
            Liolios,K., Nordberg,H.P., Cantor,M.N., Hua,S.X. and Woyke,T.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUL-2013) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ATUW00000000.1.
            The Winkia neuii subsp. neuii DSM 8576 whole genome shotgun (WGS)
            project has the project accession NZ_ATUW00000000.  This version of
            the project (01) has the accession number NZ_ATUW01000000, and
            consists of sequences ATUW01000001-ATUW01000029.
            URL -- http://www.jgi.doe.gov
            JGI Project ID: 1012127
            Source DNA and organism available from Hans-Peter Klenk at the
            German Collection of Microorganisms and Cell Cultures (DSMZ)
            (hans-peter.klenk@dsmz.de)
            Contacts: Nikos   Kyrpides (nckyrpides@lbl.gov)
                      Tanja Woyke (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI
            Annotation by JGI
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376)
            Full annotations are available from IMG.
            
            ##MIGS-Data-START##
            country            :: Switzerland
            environment        :: Host
            investigation_type :: bacteria_archaea
            isol_growth_condt  :: 8123558
            lat_lon            :: 47.373942 8.53941
            project_name       :: Actinomyces neuii neuii DSM 8576
            sequencing_meth    :: WGS
            ref_biomaterial    :: DSM 8576, ATCC 51847, CCUG 32252
            rel_to_oxygen      :: Facultative
            finishing_strategy :: Level 1: Standard Draft
            GOLD Stamp ID      :: Gi11089
            Type Strain        :: Yes
            Funding Program    :: DOE-CSP 2012
            Isolation Site     :: Infected human mammary hematoma
            Host Name          :: Homo sapiens
            Host Gender        :: Female
            Host Health        :: Infected mammary hematoma
            Cell Shape         :: Rod-shaped
            Motility           :: Nonmotile
            Sporulation        :: Nonsporulating
            Temperature Range  :: Mesophile
            Gram Staining      :: Gram+
            Phenotypes         :: Alpha-hemolytic; Catalase positive
            ##MIGS-Data-END##
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: Unknown program v. before 2013-04-10
            Genome Coverage          :: Unknown
            Sequencing Technology    :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000420405.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 09:53:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,051
            CDSs (total)                      :: 1,992
            Genes (coding)                    :: 1,974
            CDSs (with protein)               :: 1,974
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 18
            CDSs (without protein)            :: 18
            Pseudo Genes (ambiguous residues) :: 0 of 18
            Pseudo Genes (frameshifted)       :: 0 of 18
            Pseudo Genes (incomplete)         :: 17 of 18
            Pseudo Genes (internal stop)      :: 1 of 18
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2270293
                     /organism="Winkia neuii subsp. neuii DSM 8576"
                     /mol_type="genomic DNA"
                     /strain="DSM 8576"
                     /host="Homo sapiens"
                     /sub_species="neuii"
                     /culture_collection="DSM:8576"
                     /type_material="type strain of Actinomyces neuii"
                     /db_xref="taxon:1120945"
                     /geo_loc_name="Switzerland"
                     /lat_lon="47.373942 N 8.53941 E"
WGS         ATUW01000001-ATUW01000029
WGS_SCAFLD  NZ_ATUW01000001-NZ_ATUW01000029
//
LOCUS       NZ_ACZV01000000      4698244 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Vibrio orientalis CIP 102891 = ATCC 33934 strain CIP 102891, whole
            genome shotgun sequencing project.
ACCESSION   NZ_ACZV00000000
VERSION     NZ_ACZV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02393817
            Assembly: GCF_000176235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio orientalis CIP 102891 = ATCC 33934
  ORGANISM  Vibrio orientalis CIP 102891 = ATCC 33934
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio; Vibrio oreintalis group.
REFERENCE   1  (bases 1 to 4698244)
  AUTHORS   Munk,A.C., Chertkov,O., Tapia,R., Green,L., Rogers,Y., Detter,J.C.,
            Bruce,D., Brettin,T.S., Colwell,R.R., Huq,A., Grim,C.J.,
            Hasan,N.A., Bartels,D. and Vonstein,V.
  CONSRTM   Los Alamos National Laboratory (LANL), National Microbial Pathogen
            Data Resource (NMPDR)
  TITLE     Direct Submission
  JOURNAL   Submitted (07-OCT-2009) Argonne National Laboratory, 9700 S. Cass
            Ave., Argonne, IL 60527, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ACZV00000000.1.
            The Vibrio orientalis CIP 102891 = ATCC 33934 whole genome shotgun
            (WGS) project has the project accession NZ_ACZV00000000.  This
            version of the project (01) has the accession number
            NZ_ACZV01000000, and consists of sequences
            ACZV01000001-ACZV01000005.
            DNA Source: Rita Colwell (http://www.cbcb.umd.edu) and Christopher
            Grim
            Vibrio orientalis is a luminescent marine species which is
            occasionally associated with aquaculture farm stock. Vibrio
            orientalis CIP 102891 is the type strain of the species.
            The NIAID funded Bioinformatics Resource Center PathoSystems
            Resource Integration Center (http://patricbrc.vbi.vt.edu/) is
            responsible for genome annotation updates of this record.
            Genome Coverage: 8.5x
            Sequencing Technology: Sanger; 454.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000176235.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:17:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,342
            CDSs (total)                      :: 4,209
            Genes (coding)                    :: 4,191
            CDSs (with protein)               :: 4,191
            Genes (RNA)                       :: 133
            rRNAs                             :: 8, 9, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 4, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 5 (16S)
            tRNAs                             :: 104
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 18
            CDSs (without protein)            :: 18
            Pseudo Genes (ambiguous residues) :: 0 of 18
            Pseudo Genes (frameshifted)       :: 4 of 18
            Pseudo Genes (incomplete)         :: 13 of 18
            Pseudo Genes (internal stop)      :: 3 of 18
            Pseudo Genes (multiple problems)  :: 1 of 18
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4698244
                     /organism="Vibrio orientalis CIP 102891 = ATCC 33934"
                     /mol_type="genomic DNA"
                     /strain="CIP 102891"
                     /type_material="type strain of Vibrio orientalis"
                     /db_xref="taxon:675816"
                     /note="type strain of Vibrio orientalis"
WGS         ACZV01000001-ACZV01000005
WGS_SCAFLD  NZ_ACZV01000001-NZ_ACZV01000005
//
LOCUS       NZ_FMAO01000000      1820601 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Weissella bombi strain R-53094, whole genome shotgun sequencing
            project.
ACCESSION   NZ_FMAO00000000
VERSION     NZ_FMAO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04487794
            Assembly: GCF_900094835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Weissella bombi
  ORGANISM  Weissella bombi
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1
  AUTHORS   Varghese,Neha. and Submissions,Spin.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-AUG-2016) DOE - JOINT GENOME INSTITUTE, 2800 Mitchell
            Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FMAO00000000.1.
            The Weissella bombi whole genome shotgun (WGS) project has the
            project accession NZ_FMAO00000000.  This version of the project
            (01) has the accession number NZ_FMAO01000000, and consists of
            sequences FMAO01000001-FMAO01000029.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900094835.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:24:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,744
            Genes (coding)                    :: 1,734
            CDSs (with protein)               :: 1,734
            Genes (RNA)                       :: 89
            rRNAs                             :: 6, 6, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 2, 6, 2 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 7 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1820601
                     /organism="Weissella bombi"
                     /mol_type="genomic DNA"
                     /strain="R-53094"
                     /type_material="type strain of Weissella bombi"
                     /db_xref="taxon:1505725"
WGS         FMAO01000001-FMAO01000029
WGS_SCAFLD  NZ_FMAO01000001-NZ_FMAO01000029
//
LOCUS       NZ_AFWJ01000000      6113582 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Vibrio nigripulchritudo ATCC 27043, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AFWJ00000000
VERSION     NZ_AFWJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02951906
            Assembly: GCF_000222685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio nigripulchritudo ATCC 27043
  ORGANISM  Vibrio nigripulchritudo ATCC 27043
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 6113582)
  AUTHORS   Hoffmann,M., Monday,S.R., Allard,M.W., Strain,E.A., Whittaker,P.,
            Naum,M., McCarthy,P.J., Lopez,J.V., Fischer,M. and Brown,E.W.
  TITLE     Vibrio caribbeanicus sp. nov., isolated from the marine sponge
            Scleritoderma cyanea
  JOURNAL   Int J Syst Evol Microbiol 62 (Pt 8), 1736-1743 (2012)
   PUBMED   21930677
REFERENCE   2  (bases 1 to 6113582)
  AUTHORS   Hoffman,M., Strain,E.A., Brown,E. and Allard,M.W.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-AUG-2011) Center for Food Safety and Applied
            Nutrition, United States Food and Drug Administration, 5100 Paint
            Branch Parkway, College Park, MD 20740, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AFWJ00000000.1.
            The Vibrio nigripulchritudo ATCC 27043 whole genome shotgun (WGS)
            project has the project accession NZ_AFWJ00000000.  This version of
            the project (01) has the accession number NZ_AFWJ01000000, and
            consists of sequences AFWJ01000001-AFWJ01000332.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.5
            Genome Coverage       :: 20x
            Sequencing Technology :: 454 FLX Titanium
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000222685.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:21:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,749
            CDSs (total)                      :: 5,658
            Genes (coding)                    :: 5,524
            CDSs (with protein)               :: 5,524
            Genes (RNA)                       :: 91
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 1, 4 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 134
            CDSs (without protein)            :: 134
            Pseudo Genes (ambiguous residues) :: 0 of 134
            Pseudo Genes (frameshifted)       :: 54 of 134
            Pseudo Genes (incomplete)         :: 82 of 134
            Pseudo Genes (internal stop)      :: 3 of 134
            Pseudo Genes (multiple problems)  :: 4 of 134
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6113582
                     /organism="Vibrio nigripulchritudo ATCC 27043"
                     /mol_type="genomic DNA"
                     /strain="ATCC 27043"
                     /culture_collection="ATCC:27043"
                     /type_material="type strain of Beneckea nigripulchritudo"
                     /db_xref="taxon:1051649"
WGS         AFWJ01000001-AFWJ01000332
WGS_SCAFLD  NZ_AFWJ01000001-NZ_AFWJ01000332
//
LOCUS       NZ_CBXF010000000     4824775 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Xenorhabdus szentirmaii DSM 16338, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CBXF000000000
VERSION     NZ_CBXF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3138908
            Assembly: GCF_000531455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Xenorhabdus szentirmaii DSM 16338
  ORGANISM  Xenorhabdus szentirmaii DSM 16338
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1
  AUTHORS   Gualtieri,M., Ogier,J.C., Pages,S., Givaudan,A. and Gaudriault,S.
  TITLE     Draft genome sequence and annotation of the entomopathogenic
            bacteria, Xenorhabdus cabanillasi strain JM26 and Xenorhabdus
            szentirmai strain DSM 16338
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4824775)
  AUTHORS   Gaudriault,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-NOV-2013) INRA, Universite Montpellier2, Laboratoire
            EMIP, UMR 1133, CC 54, Universite Montpellier 2, Place, Eugene
            Bataillon 34095 MONTPELLIER CEDEX 05, FRANCE
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBXF000000000.1.
            The Xenorhabdus szentirmaii DSM 16338 whole genome shotgun (WGS)
            project has the project accession NZ_CBXF000000000.  This version
            of the project (01) has the accession number NZ_CBXF010000000, and
            consists of sequences CBXF010000001-CBXF010000164.
            Annotation results relative to BLAST similarities, COG
            assignations, enzymatic function prediction (PRIAM software),
            TMHMM, PsortB and SignalP predictions, and synteny conservation
            (Syntonizer software) are available in the MicroScope annotation
            platform
            http://www.genoscope.cns.fr/agc/microscope.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000531455.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:18:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,332
            CDSs (total)                      :: 4,264
            Genes (coding)                    :: 4,064
            CDSs (with protein)               :: 4,064
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 200
            CDSs (without protein)            :: 200
            Pseudo Genes (ambiguous residues) :: 0 of 200
            Pseudo Genes (frameshifted)       :: 74 of 200
            Pseudo Genes (incomplete)         :: 137 of 200
            Pseudo Genes (internal stop)      :: 47 of 200
            Pseudo Genes (multiple problems)  :: 49 of 200
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4824775
                     /organism="Xenorhabdus szentirmaii DSM 16338"
                     /mol_type="genomic DNA"
                     /strain="DSM 16338"
                     /type_material="type strain of Xenorhabdus szentirmaii"
                     /db_xref="taxon:1427518"
WGS         CBXF010000001-CBXF010000164
WGS_SCAFLD  NZ_CBXF010000001-NZ_CBXF010000164
//
LOCUS       NZ_MUBK01000000      4096354 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Xenorhabdus beddingii strain DSM 4764, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MUBK00000000
VERSION     NZ_MUBK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05375051
            Assembly: GCF_002127545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Xenorhabdus beddingii
  ORGANISM  Xenorhabdus beddingii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (bases 1 to 4096354)
  AUTHORS   Tobias,N.J., Wolff,H., Djahanschiri,B., Ebersberger,I. and
            Bode,H.B.
  TITLE     Deconstructing symbiosis and pathogenesis requirements using a
            combined genomic-metabolomic approach
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4096354)
  AUTHORS   Tobias,N.J., Wolff,H., Djahanschiri,B., Ebersberger,I. and
            Bode,H.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-JAN-2017) Goethe University, Max-von-Laue Strasse 9,
            Frankfurt Am Main, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MUBK00000000.1.
            The Xenorhabdus beddingii whole genome shotgun (WGS) project has
            the project accession NZ_MUBK00000000.  This version of the project
            (01) has the accession number NZ_MUBK01000000, and consists of
            sequences MUBK01000001-MUBK01000210.
            Bacteria and source DNA available from DSMZ.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. Oct-2016
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002127545.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:57:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,856
            CDSs (total)                      :: 3,755
            Genes (coding)                    :: 3,599
            CDSs (with protein)               :: 3,599
            Genes (RNA)                       :: 101
            rRNAs                             :: 6, 2, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 1, 6 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 156
            CDSs (without protein)            :: 156
            Pseudo Genes (ambiguous residues) :: 0 of 156
            Pseudo Genes (frameshifted)       :: 46 of 156
            Pseudo Genes (incomplete)         :: 131 of 156
            Pseudo Genes (internal stop)      :: 13 of 156
            Pseudo Genes (multiple problems)  :: 33 of 156
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4096354
                     /organism="Xenorhabdus beddingii"
                     /mol_type="genomic DNA"
                     /strain="DSM 4764"
                     /isolation_source="nematode"
                     /culture_collection="DSM:4764"
                     /type_material="type strain of Xenorhabdus beddingii"
                     /db_xref="taxon:40578"
                     /geo_loc_name="Australia: Queensland"
                     /collection_date="1986"
WGS         MUBK01000001-MUBK01000210
WGS_SCAFLD  NZ_MUBK01000001-NZ_MUBK01000210
//
LOCUS       NZ_MVKR01000000      4867074 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Vibrio vulnificus strain VN-0104, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MVKR00000000
VERSION     NZ_MVKR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03486854
            Assembly: GCF_002073105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio vulnificus
  ORGANISM  Vibrio vulnificus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4867074)
  AUTHORS   Blom,J., Eichhorn,C., Zimmermann,C., Auerbach,C., Goesmann,A.,
            Strauch,E. and Gunzer,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2015) Bioinformatics and Systems Biology,
            Justus-Liebig-University Giessen, Heinrich Buff Ring 58, Giessen,
            Hessen 35392, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MVKR00000000.1.
            The Vibrio vulnificus whole genome shotgun (WGS) project has the
            project accession NZ_MVKR00000000.  This version of the project
            (01) has the accession number NZ_MVKR01000000, and consists of
            sequences MVKR01000001-MVKR01000144.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.8
            Genome Coverage       :: 67.0x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002073105.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:55:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,344
            CDSs (total)                      :: 4,252
            Genes (coding)                    :: 4,213
            CDSs (with protein)               :: 4,213
            Genes (RNA)                       :: 92
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 83
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 6 of 39
            Pseudo Genes (incomplete)         :: 30 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 4 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4867074
                     /organism="Vibrio vulnificus"
                     /mol_type="genomic DNA"
                     /strain="VN-0104"
                     /isolation_source="seawater"
                     /db_xref="taxon:672"
                     /geo_loc_name="Germany: Baltic Sea, Binz"
                     /collection_date="2010"
WGS         MVKR01000001-MVKR01000144
WGS_SCAFLD  NZ_MVKR01000001-NZ_MVKR01000144
//
LOCUS       NZ_MKGQ01000000      4242650 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Xenorhabdus eapokensis strain DL20, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MKGQ00000000
VERSION     NZ_MKGQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05375127
            Assembly: GCF_001908105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Xenorhabdus eapokensis
  ORGANISM  Xenorhabdus eapokensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (bases 1 to 4242650)
  AUTHORS   Kaempfer,P., Tobias,N.J., Phan Ke,L., Bode,H.B. and Glaeser,S.P.
  TITLE     Xenorhabdus thuongxuanensis sp. nov. and Xenorhabdus eapokensis sp.
            nov., isolated from Steinernema species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4242650)
  AUTHORS   Kaempfer,P., Tobias,N.J., Phan Ke,L., Bode,H.B. and Glaeser,S.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2016) Goethe University, Max-von-Laue Strasse 9,
            Frankfurt Am Main, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MKGQ00000000.1.
            The Xenorhabdus eapokensis whole genome shotgun (WGS) project has
            the project accession NZ_MKGQ00000000.  This version of the project
            (01) has the accession number NZ_MKGQ01000000, and consists of
            sequences MKGQ01000001-MKGQ01000212.
            Bacteria and source DNA available from DSMZ.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. September 2016
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 15.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001908105.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:55:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,042
            CDSs (total)                      :: 3,937
            Genes (coding)                    :: 3,737
            CDSs (with protein)               :: 3,737
            Genes (RNA)                       :: 105
            rRNAs                             :: 8, 3, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 84
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 200
            CDSs (without protein)            :: 200
            Pseudo Genes (ambiguous residues) :: 0 of 200
            Pseudo Genes (frameshifted)       :: 37 of 200
            Pseudo Genes (incomplete)         :: 183 of 200
            Pseudo Genes (internal stop)      :: 17 of 200
            Pseudo Genes (multiple problems)  :: 33 of 200
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4242650
                     /organism="Xenorhabdus eapokensis"
                     /mol_type="genomic DNA"
                     /strain="DL20"
                     /host="Steinernema"
                     /type_material="type strain of Xenorhabdus eapokensis"
                     /db_xref="taxon:1873482"
WGS         MKGQ01000001-MKGQ01000212
WGS_SCAFLD  NZ_MKGQ01000001-NZ_MKGQ01000212
//
LOCUS       NZ_NJAK01000000      3859346 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Xenorhabdus ishibashii strain DSM 22670, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NJAK00000000
VERSION     NZ_NJAK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05817834
            Assembly: GCF_002632755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Xenorhabdus ishibashii
  ORGANISM  Xenorhabdus ishibashii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (bases 1 to 3859346)
  AUTHORS   Tobias,N.J., Wolff,H., Djahanschiri,B., Grundmann,F.,
            Kronenwerth,M., Shi,Y.M., Simonyi,S., Grun,P., Shapiro-Ilan,D.,
            Pidot,S.J., Stinear,T.P., Ebersberger,I. and Bode,H.B.
  TITLE     Natural product diversity associated with the nematode symbionts
            Photorhabdus and Xenorhabdus
  JOURNAL   Nat Microbiol 2 (12), 1676-1685 (2017)
   PUBMED   28993611
REFERENCE   2  (bases 1 to 3859346)
  AUTHORS   Tobias,N.J., Wolff,H., Djahanschiri,B., Ebersberger,I. and
            Bode,H.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUN-2017) Goethe University, Max-von-Laue Strasse 9,
            Frankfurt Am Main, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NJAK00000000.1.
            The Xenorhabdus ishibashii whole genome shotgun (WGS) project has
            the project accession NZ_NJAK00000000.  This version of the project
            (01) has the accession number NZ_NJAK01000000, and consists of
            sequences NJAK01000001-NJAK01000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: HGAP3 v. Oct 2016
            Genome Coverage       :: 240.0x
            Sequencing Technology :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002632755.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:41:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,672
            CDSs (total)                      :: 3,566
            Genes (coding)                    :: 3,400
            CDSs (with protein)               :: 3,400
            Genes (RNA)                       :: 106
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 66 of 166
            Pseudo Genes (incomplete)         :: 116 of 166
            Pseudo Genes (internal stop)      :: 13 of 166
            Pseudo Genes (multiple problems)  :: 26 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3859346
                     /organism="Xenorhabdus ishibashii"
                     /mol_type="genomic DNA"
                     /strain="DSM 22670"
                     /host="Steinernema"
                     /culture_collection="DSM:22670"
                     /type_material="type strain of Xenorhabdus ishibashii"
                     /db_xref="taxon:1034471"
WGS         NJAK01000001-NJAK01000005
WGS_SCAFLD  NZ_NJAK01000001-NZ_NJAK01000005
//
LOCUS       NZ_NJCX01000000      4124875 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Xenorhabdus kozodoii strain DSM 17907, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NJCX00000000
VERSION     NZ_NJCX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05375104
            Assembly: GCF_002632875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Xenorhabdus kozodoii
  ORGANISM  Xenorhabdus kozodoii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (bases 1 to 4124875)
  AUTHORS   Tobias,N.J., Wolff,H., Djahanschiri,B., Grundmann,F.,
            Kronenwerth,M., Shi,Y.M., Simonyi,S., Grun,P., Shapiro-Ilan,D.,
            Pidot,S.J., Stinear,T.P., Ebersberger,I. and Bode,H.B.
  TITLE     Natural product diversity associated with the nematode symbionts
            Photorhabdus and Xenorhabdus
  JOURNAL   Nat Microbiol 2 (12), 1676-1685 (2017)
   PUBMED   28993611
REFERENCE   2  (bases 1 to 4124875)
  AUTHORS   Tobias,N.J., Wolff,H., Djahanschiri,B., Ebersberger,I. and
            Bode,H.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-JUN-2017) Goethe University, Max-von-Laue Strasse 9,
            Frankfurt Am Main, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NJCX00000000.1.
            The Xenorhabdus kozodoii whole genome shotgun (WGS) project has the
            project accession NZ_NJCX00000000.  This version of the project
            (01) has the accession number NZ_NJCX01000000, and consists of
            sequences NJCX01000001-NJCX01000140.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: spades v. Oct 2016
            Genome Coverage       :: 20.0x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002632875.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:41:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,861
            CDSs (total)                      :: 3,755
            Genes (coding)                    :: 3,598
            CDSs (with protein)               :: 3,598
            Genes (RNA)                       :: 106
            rRNAs                             :: 10, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 3 (5S, 23S)
            partial rRNAs                     :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 157
            CDSs (without protein)            :: 157
            Pseudo Genes (ambiguous residues) :: 0 of 157
            Pseudo Genes (frameshifted)       :: 32 of 157
            Pseudo Genes (incomplete)         :: 134 of 157
            Pseudo Genes (internal stop)      :: 18 of 157
            Pseudo Genes (multiple problems)  :: 23 of 157
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4124875
                     /organism="Xenorhabdus kozodoii"
                     /mol_type="genomic DNA"
                     /strain="DSM 17907"
                     /host="Steinernema arenarium"
                     /culture_collection="DSM:17907"
                     /type_material="type strain of Xenorhabdus kozodoii"
                     /db_xref="taxon:351676"
                     /geo_loc_name="Russia: Voronez"
WGS         NJCX01000001-NJCX01000140
WGS_SCAFLD  NZ_NJCX01000001-NZ_NJCX01000140
//
LOCUS       NZ_NITZ01000000      4992355 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Xenorhabdus miraniensis strain DSM 17902, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NITZ00000000
VERSION     NZ_NITZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05375099
            Assembly: GCF_002632615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Xenorhabdus miraniensis
  ORGANISM  Xenorhabdus miraniensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (bases 1 to 4992355)
  AUTHORS   Tobias,N.J., Wolff,H., Djahanschiri,B., Grundmann,F.,
            Kronenwerth,M., Shi,Y.M., Simonyi,S., Grun,P., Shapiro-Ilan,D.,
            Pidot,S.J., Stinear,T.P., Ebersberger,I. and Bode,H.B.
  TITLE     Natural product diversity associated with the nematode symbionts
            Photorhabdus and Xenorhabdus
  JOURNAL   Nat Microbiol 2 (12), 1676-1685 (2017)
   PUBMED   28993611
REFERENCE   2  (bases 1 to 4992355)
  AUTHORS   Tobias,N.J., Wolff,H., Djahanschiri,B., Ebersberger,I. and
            Bode,H.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JUN-2017) Goethe University, Max-von-Laue Strasse 9,
            Frankfurt Am Main, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NITZ00000000.1.
            The Xenorhabdus miraniensis whole genome shotgun (WGS) project has
            the project accession NZ_NITZ00000000.  This version of the project
            (01) has the accession number NZ_NITZ01000000, and consists of
            sequences NITZ01000001-NITZ01000138.
            Bacteria and source DNA available from DSMZ.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: spades v. oct 2016
            Genome Coverage       :: 20x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002632615.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:30:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,468
            CDSs (total)                      :: 4,357
            Genes (coding)                    :: 4,173
            CDSs (with protein)               :: 4,173
            Genes (RNA)                       :: 111
            rRNAs                             :: 9, 3, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9 (5S, 23S)
            partial rRNAs                     :: 3 (16S)
            tRNAs                             :: 86
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 184
            CDSs (without protein)            :: 184
            Pseudo Genes (ambiguous residues) :: 0 of 184
            Pseudo Genes (frameshifted)       :: 42 of 184
            Pseudo Genes (incomplete)         :: 160 of 184
            Pseudo Genes (internal stop)      :: 34 of 184
            Pseudo Genes (multiple problems)  :: 47 of 184
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4992355
                     /organism="Xenorhabdus miraniensis"
                     /mol_type="genomic DNA"
                     /strain="DSM 17902"
                     /host="Steinernema"
                     /culture_collection="DSM:17902"
                     /type_material="type strain of Xenorhabdus miraniensis"
                     /db_xref="taxon:351674"
                     /geo_loc_name="Australia: Queensland"
WGS         NITZ01000001-NITZ01000138
WGS_SCAFLD  NZ_NITZ01000001-NZ_NITZ01000138
//
LOCUS       NZ_QLYZ01000000      4559685 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Vibrio rhodolitus strain G98, whole genome shotgun sequencing
            project.
ACCESSION   NZ_QLYZ00000000
VERSION     NZ_QLYZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09437463
            Assembly: GCF_003350325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio rhodolitus
  ORGANISM  Vibrio rhodolitus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4559685)
  AUTHORS   Silva,C.S.F., Walter,J.M., Nobrega,M.S., Calegario,G.,
            Appolinario,L.R., Leomil,L., Cavalcanti,G., Silva,B.S.,
            Garcia,G.D., Tschoeke,D., Swings,J., Thompson,F.L. and
            Thompson,C.C.
  TITLE     Genome Sequences of Vibrio maerlii sp. nov. and Vibrio rhodolitus
            sp. nov., Isolated from Rhodoliths
  JOURNAL   Microbiol Resour Announc 7 (19) (2018)
  REMARK    Publication Status: Online-Only
            DOI: 10.1128/MRA.01039-18
REFERENCE   2  (bases 1 to 4559685)
  AUTHORS   Silva,C., Walter,J.M., Soares,M., Leomil,L., Thompson,F.L. and
            Thompson,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-JUN-2018) Biology, Federal University of Rio de
            Janeiro, Av. Carlos Chagas Filho, Rio de Janeiro, Rio de Janeiro
            21941-599, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QLYZ00000000.1.
            The Vibrio rhodolitus whole genome shotgun (WGS) project has the
            project accession NZ_QLYZ00000000.  This version of the project
            (01) has the accession number NZ_QLYZ01000000, and consists of
            sequences QLYZ01000001-QLYZ01000062.
            Bacteria and source DNA available from Fabiano Thompson, Av Carlos
            Chagas Filho 373, Instituto de Biologia, Lab de Microbiologia,
            Federal University of Rio de Janeiro, CEP 21941599, Rio de Janeiro,
            RJ, Brazil.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-JUL-2017
            Assembly Method        :: A5-miseq v. 20160825; CAP3 v. 20160825
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 94.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003350325.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:41:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,224
            CDSs (total)                      :: 4,080
            Genes (coding)                    :: 4,033
            CDSs (with protein)               :: 4,033
            Genes (RNA)                       :: 144
            rRNAs                             :: 11, 13, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 1 (5S, 16S)
            partial rRNAs                     :: 2, 12, 9 (5S, 16S, 23S)
            tRNAs                             :: 107
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 47
            CDSs (without protein)            :: 47
            Pseudo Genes (ambiguous residues) :: 0 of 47
            Pseudo Genes (frameshifted)       :: 9 of 47
            Pseudo Genes (incomplete)         :: 36 of 47
            Pseudo Genes (internal stop)      :: 5 of 47
            Pseudo Genes (multiple problems)  :: 3 of 47
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4559685
                     /organism="Vibrio rhodolitus"
                     /mol_type="genomic DNA"
                     /strain="G98"
                     /host="rhodolith"
                     /type_material="type strain of Vibrio rhodolitus"
                     /db_xref="taxon:2231649"
                     /geo_loc_name="Brazil: Abrolhos"
                     /collection_date="2010-05-12"
WGS         QLYZ01000001-QLYZ01000062
WGS_SCAFLD  NZ_QLYZ01000001-NZ_QLYZ01000062
//
LOCUS       NZ_RAQI01000000      4058264 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Xenorhabdus ehlersii strain DSM 16337, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RAQI00000000
VERSION     NZ_RAQI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05444957
            Assembly: GCF_003610465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Xenorhabdus ehlersii
  ORGANISM  Xenorhabdus ehlersii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (bases 1 to 4058264)
  AUTHORS   Goeker,M.
  TITLE     Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase
            II (KMG-II): from individual species to whole genera
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4058264)
  AUTHORS   Goeker,M., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-SEP-2018) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RAQI00000000.1.
            The Xenorhabdus ehlersii whole genome shotgun (WGS) project has the
            project accession NZ_RAQI00000000.  This version of the project
            (01) has the accession number NZ_RAQI01000000, and consists of
            sequences RAQI01000001-RAQI01000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. smrtanalysis/2.3.0_p5, HGAP 3
            Expected Final Version :: No
            Genome Coverage        :: 90.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003610465.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:04:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,841
            CDSs (total)                      :: 3,728
            Genes (coding)                    :: 3,527
            CDSs (with protein)               :: 3,527
            Genes (RNA)                       :: 113
            rRNAs                             :: 9, 8, 11 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 6, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 5 (16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 201
            CDSs (without protein)            :: 201
            Pseudo Genes (ambiguous residues) :: 0 of 201
            Pseudo Genes (frameshifted)       :: 81 of 201
            Pseudo Genes (incomplete)         :: 146 of 201
            Pseudo Genes (internal stop)      :: 28 of 201
            Pseudo Genes (multiple problems)  :: 44 of 201
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4058264
                     /organism="Xenorhabdus ehlersii"
                     /mol_type="genomic DNA"
                     /strain="DSM 16337"
                     /culture_collection="DSM:16337"
                     /type_material="type strain of Xenorhabdus ehlersii"
                     /db_xref="taxon:290111"
                     /geo_loc_name="China"
WGS         RAQI01000001-RAQI01000009
WGS_SCAFLD  NZ_RAQI01000001-NZ_RAQI01000009
//
LOCUS       NZ_RZIS01000000      5189280 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Vibrio profundi strain TP187, whole genome shotgun sequencing
            project.
ACCESSION   NZ_RZIS00000000
VERSION     NZ_RZIS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10654000
            Assembly: GCF_005281835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio profundi
  ORGANISM  Vibrio profundi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 5189280)
  AUTHORS   Zhang,D. and Qiao,N.
  TITLE     Vibrio sp. nov., isolated from a deep-sea seamount
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5189280)
  AUTHORS   Zhang,D. and Qiao,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-DEC-2018) Institute of Oceanology, Chinese Academy of
            Sciences, Nanhai Road, Qingdao 266071, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RZIS00000000.1.
            The Vibrio profundi whole genome shotgun (WGS) project has the
            project accession NZ_RZIS00000000.  This version of the project
            (01) has the accession number NZ_RZIS01000000, and consists of
            sequences RZIS01000001-RZIS01000025.
            Bacteria and source DNA available from Zhang Dechao Laboratory.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. JUN-2018
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005281835.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:37:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,750
            CDSs (total)                      :: 4,636
            Genes (coding)                    :: 4,604
            CDSs (with protein)               :: 4,604
            Genes (RNA)                       :: 114
            rRNAs                             :: 7, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 2, 1 (5S, 16S, 23S)
            tRNAs                             :: 98
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 5 of 32
            Pseudo Genes (incomplete)         :: 27 of 32
            Pseudo Genes (internal stop)      :: 5 of 32
            Pseudo Genes (multiple problems)  :: 5 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5189280
                     /organism="Vibrio profundi"
                     /mol_type="genomic DNA"
                     /strain="TP187"
                     /isolation_source="sea water"
                     /type_material="type material of Vibrio profundi"
                     /db_xref="taxon:1774960"
                     /geo_loc_name="China: Qingdao"
                     /collection_date="2014"
WGS         RZIS01000001-RZIS01000025
WGS_SCAFLD  NZ_RZIS01000001-NZ_RZIS01000025
//
LOCUS       NZ_RBZD01000000      4823242 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Vibrio vulnificus strain VA-WGS-18034, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RBZD00000000
VERSION     NZ_RBZD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09386757
            Assembly: GCF_004214575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio vulnificus
  ORGANISM  Vibrio vulnificus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4823242)
  AUTHORS   Ramirez,G.D., Buck,G.W., Smith,A.K., Gordon,K.V. and Mott,J.B.
  TITLE     Genomic sequencing and assembly of Vibrio vulnificus isolates from
            the northern Gulf of Mexico
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4823242)
  AUTHORS   Ramirez,G.D., Buck,G.W., Smith,A.K., Gordon,K.V. and Mott,J.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-OCT-2018) Life Sciences, Texas A&M - Corpus Christi,
            6300 Ocean Drive, Corpus Christi, TX 78412, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RBZD00000000.1.
            The Vibrio vulnificus whole genome shotgun (WGS) project has the
            project accession NZ_RBZD00000000.  This version of the project
            (01) has the accession number NZ_RBZD01000000, and consists of
            sequences RBZD01000001-RBZD01000063.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 93.2485178x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004214575.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:39:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,334
            CDSs (total)                      :: 4,229
            Genes (coding)                    :: 4,188
            CDSs (with protein)               :: 4,188
            Genes (RNA)                       :: 105
            rRNAs                             :: 4, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 4, 3 (16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 41
            CDSs (without protein)            :: 41
            Pseudo Genes (ambiguous residues) :: 0 of 41
            Pseudo Genes (frameshifted)       :: 17 of 41
            Pseudo Genes (incomplete)         :: 26 of 41
            Pseudo Genes (internal stop)      :: 12 of 41
            Pseudo Genes (multiple problems)  :: 13 of 41
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4823242
                     /organism="Vibrio vulnificus"
                     /mol_type="genomic DNA"
                     /strain="VA-WGS-18034"
                     /isolation_source="estuarine water"
                     /db_xref="taxon:672"
                     /geo_loc_name="USA"
                     /collection_date="2006-09"
                     /collected_by="Texas A&M University-Corpus Christy"
WGS         RBZD01000001-RBZD01000063
WGS_SCAFLD  NZ_RBZD01000001-NZ_RBZD01000063
//
LOCUS       NZ_CAWOAA010000000   5535057 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Vibrio splendidus isolate ena-yuan-GCF_003050145.1, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CAWOAA000000000
VERSION     NZ_CAWOAA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA115017663
            Assembly: GCF_963879065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio splendidus
  ORGANISM  Vibrio splendidus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 5535057)
  AUTHORS   Yuan,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-DEC-2023) NAU, Nanjing 210095, China, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAWOAA000000000.1.
            The Vibrio splendidus whole genome shotgun (WGS) project has the
            project accession NZ_CAWOAA000000000.  This version of the project
            (01) has the accession number NZ_CAWOAA010000000, and consists of
            sequences CAWOAA010000001-CAWOAA010000269.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_963879065.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:05:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,131
            CDSs (total)                      :: 5,041
            Genes (coding)                    :: 4,715
            CDSs (with protein)               :: 4,715
            Genes (RNA)                       :: 90
            rRNAs                             :: 9, 5, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 4, 2 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 326
            CDSs (without protein)            :: 326
            Pseudo Genes (ambiguous residues) :: 0 of 326
            Pseudo Genes (frameshifted)       :: 74 of 326
            Pseudo Genes (incomplete)         :: 255 of 326
            Pseudo Genes (internal stop)      :: 21 of 326
            Pseudo Genes (multiple problems)  :: 22 of 326
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5535057
                     /organism="Vibrio splendidus"
                     /mol_type="genomic DNA"
                     /isolate="ena-yuan-GCF_003050145.1"
                     /db_xref="taxon:29497"
WGS         CAWOAA010000001-CAWOAA010000269
WGS_SCAFLD  NZ_CAWOAA010000001-NZ_CAWOAA010000269
//
LOCUS       NZ_JBBMLB010000000   4817404 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Vibrio vulnificus strain Per4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBMLB000000000
VERSION     NZ_JBBMLB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40627815
            Assembly: GCF_037937255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio vulnificus
  ORGANISM  Vibrio vulnificus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4817404)
  AUTHORS   Carmona-Salido,H., Salvador-Clavell,R. and Amaro,C.
  TITLE     Vibrio vulnificus Albufera genomes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4817404)
  AUTHORS   Carmona-Salido,H., Salvador-Clavell,R. and Amaro,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2024) Microbiology and ecology, University of
            Valencia, Av. de Blasco Ibanyez, 13, Valencia, Valencia 46010,
            Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBMLB000000000.1.
            The Vibrio vulnificus whole genome shotgun (WGS) project has the
            project accession NZ_JBBMLB000000000.  This version of the project
            (01) has the accession number NZ_JBBMLB010000000, and consists of
            sequences JBBMLB010000001-JBBMLB010000060.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 125x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037937255.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 17:08:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,297
            CDSs (total)                      :: 4,201
            Genes (coding)                    :: 4,162
            CDSs (with protein)               :: 4,162
            Genes (RNA)                       :: 96
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 88
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 12 of 39
            Pseudo Genes (incomplete)         :: 26 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 6 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4817404
                     /organism="Vibrio vulnificus"
                     /mol_type="genomic DNA"
                     /strain="Per4"
                     /isolation_source="environmental water"
                     /db_xref="taxon:672"
                     /geo_loc_name="Spain: Albufera Lake"
                     /lat_lon="39.3084 N 0.2938 W"
                     /collection_date="2023-04-19"
                     /collected_by="Universitat de Valencia"
WGS         JBBMLB010000001-JBBMLB010000060
WGS_SCAFLD  NZ_JBBMLB010000001-NZ_JBBMLB010000060
//
LOCUS       NZ_CBBKHQ010000000   2693338 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Zwartia sp. isolate
            PELAGICS-MAG-m2-bin102213-BALM3-SM-06apr22., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBBKHQ000000000
VERSION     NZ_CBBKHQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117450582
            Assembly: GCF_964906255.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Zwartia sp. (freshwater metagenome)
  ORGANISM  Zwartia sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Zwartia.
REFERENCE   1  (bases 1 to 2693338)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JAN-2025) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBBKHQ000000000.1.
            The Zwartia sp. whole genome shotgun (WGS) project has the project
            accession NZ_CBBKHQ000000000.  This version of the project (01) has
            the accession number NZ_CBBKHQ010000000, and consists of sequences
            CBBKHQ010000001-CBBKHQ010000187.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964906255.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 01:14:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,707
            CDSs (total)                      :: 2,666
            Genes (coding)                    :: 2,614
            CDSs (with protein)               :: 2,614
            Genes (RNA)                       :: 41
            rRNAs                             :: 2 (5S)
            complete rRNAs                    :: 2 (5S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 3 of 52
            Pseudo Genes (incomplete)         :: 49 of 52
            Pseudo Genes (internal stop)      :: 2 of 52
            Pseudo Genes (multiple problems)  :: 2 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2693338
                     /organism="Zwartia sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-m2-bin102213-BALM3-SM-06apr22."
                     /isolation_source="Balaton lake"
                     /db_xref="taxon:2978004"
                     /environmental_sample
                     /geo_loc_name="Hungary"
                     /collection_date="2022-04-06"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBBKHQ010000001-CBBKHQ010000187
WGS_SCAFLD  NZ_CBBKHQ010000001-NZ_CBBKHQ010000187
//
LOCUS       NZ_AALF02000000      4711317 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Yersinia intermedia ATCC 29909, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AALF00000000
VERSION     NZ_AALF00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00005354
            Assembly: GCF_000168035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia intermedia ATCC 29909
  ORGANISM  Yersinia intermedia ATCC 29909
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4711317)
  AUTHORS   Read,T.D., Akmal,A., Bishop-Lilly,K., Chen,P.E., Cook,C.,
            Kiley,M.P., Lentz,S., Mateczun,A., Nagarajan,N., Nolan,N.,
            Osborne,B.I., Pop,M., Sozhamannan,S., Stewart,A.C.,
            Sulakvelidze,A., Thomason,B., Willner,K. and Zwick,M.E.
  TITLE     Annotation of the Yersinia intermedia ATCC 29909 genome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4711317)
  AUTHORS   Read,T.D., Akmal,A., Bishop-Lilly,K., Chen,P.E., Cook,C.,
            Kiley,M.P., Lentz,S., Mateczun,A., Nagarajan,N., Nolan,N.,
            Osborne,B.I., Pop,M., Sozhamannan,S., Stewart,A.C.,
            Sulakvelidze,A., Thomason,B., Willner,K. and Zwick,M.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2008) Biological Defense Research Directorate,
            12300 Washington Avenue, Rockville, MD 20852, USA
REFERENCE   3  (bases 1 to 4711317)
  AUTHORS   Read,T.D., Zwick,M.E., Tsai,J., Akmal,A., Benitez,M., Clark,C.N.,
            Desany,B.A., Irzyk,G., Kiley,M., Lu,H., Mateczun,A., Perbost,C.S.,
            Vijayadamodar,G.V. and Du,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-OCT-2005) Biological Defense Research Directorate,
            Naval Medical Research Center, Rockville, MD 20851, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AALF00000000.2.
            
            On Jun 2, 2009 this sequence version replaced NZ_AALF00000000.1.
            The Yersinia intermedia ATCC 29909 whole genome shotgun (WGS)
            project has the project accession NZ_AALF00000000.  This version of
            the project (02) has the accession number NZ_AALF02000000, and
            consists of sequences AALF02000001-AALF02000123.
            Genome coverage: 38.7X.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Unknown v. before 2010
            Genome Coverage       :: 38.7x
            Sequencing Technology :: Unknown
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000168035.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:15:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,264
            CDSs (total)                      :: 4,160
            Genes (coding)                    :: 4,050
            CDSs (with protein)               :: 4,050
            Genes (RNA)                       :: 104
            rRNAs                             :: 2, 4, 21 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 21 (16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 110
            CDSs (without protein)            :: 110
            Pseudo Genes (ambiguous residues) :: 0 of 110
            Pseudo Genes (frameshifted)       :: 59 of 110
            Pseudo Genes (incomplete)         :: 66 of 110
            Pseudo Genes (internal stop)      :: 18 of 110
            Pseudo Genes (multiple problems)  :: 27 of 110
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4711317
                     /organism="Yersinia intermedia ATCC 29909"
                     /mol_type="genomic DNA"
                     /strain="ATCC 29909"
                     /culture_collection="ATCC:29909"
                     /type_material="type strain of Yersinia intermedia"
                     /db_xref="taxon:349965"
WGS         AALF02000001-AALF02000123
WGS_SCAFLD  NZ_AALF02000001-NZ_AALF02000123
//
LOCUS       NZ_JBXGID010000000   1895346 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Weissella paramesenteroides strain SL26, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGID000000000
VERSION     NZ_JBXGID000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772372
            Assembly: GCF_056855715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Weissella paramesenteroides
  ORGANISM  Weissella paramesenteroides
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (bases 1 to 1895346)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGID000000000.1.
            The Weissella paramesenteroides whole genome shotgun (WGS) project
            has the project accession NZ_JBXGID000000000.  This version of the
            project (01) has the accession number NZ_JBXGID010000000, and
            consists of sequences JBXGID010000001-JBXGID010000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855715.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:41:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,889
            CDSs (total)                      :: 1,820
            Genes (coding)                    :: 1,807
            CDSs (with protein)               :: 1,807
            Genes (RNA)                       :: 69
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 4 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 2 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1895346
                     /organism="Weissella paramesenteroides"
                     /mol_type="genomic DNA"
                     /strain="SL26"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:1249"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2023-02-13"
WGS         JBXGID010000001-JBXGID010000026
WGS_SCAFLD  NZ_JBXGID010000001-NZ_JBXGID010000026
//
LOCUS       NZ_JBSXNN010000000   3749469 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Vreelandella sp. L-15, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXNN000000000
VERSION     NZ_JBSXNN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312073
            Assembly: GCF_056857635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vreelandella sp. L-15
  ORGANISM  Vreelandella sp. L-15
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
REFERENCE   1  (bases 1 to 3749469)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXNN000000000.1.
            The Vreelandella sp. L-15 whole genome shotgun (WGS) project has
            the project accession NZ_JBSXNN000000000.  This version of the
            project (01) has the accession number NZ_JBSXNN010000000, and
            consists of sequences JBSXNN010000001-JBSXNN010000107.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 304.13x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857635.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:10:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,651
            CDSs (total)                      :: 3,581
            Genes (coding)                    :: 3,499
            CDSs (with protein)               :: 3,499
            Genes (RNA)                       :: 70
            rRNAs                             :: 5, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 23S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 17 of 82
            Pseudo Genes (incomplete)         :: 68 of 82
            Pseudo Genes (internal stop)      :: 7 of 82
            Pseudo Genes (multiple problems)  :: 10 of 82
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3749469
                     /organism="Vreelandella sp. L-15"
                     /mol_type="genomic DNA"
                     /strain="L-15"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472692"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.71773 N 63.86117 E"
                     /collection_date="2022-06"
WGS         JBSXNN010000001-JBSXNN010000107
WGS_SCAFLD  NZ_JBSXNN010000001-NZ_JBSXNN010000107
//
LOCUS       NZ_JBSXNS010000000   3753199 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Vreelandella sp. L-1, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXNS000000000
VERSION     NZ_JBSXNS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312068
            Assembly: GCF_056857755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vreelandella sp. L-1
  ORGANISM  Vreelandella sp. L-1
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
REFERENCE   1  (bases 1 to 3753199)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXNS000000000.1.
            The Vreelandella sp. L-1 whole genome shotgun (WGS) project has the
            project accession NZ_JBSXNS000000000.  This version of the project
            (01) has the accession number NZ_JBSXNS010000000, and consists of
            sequences JBSXNS010000001-JBSXNS010000108.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 335.47x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857755.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:03:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,658
            CDSs (total)                      :: 3,592
            Genes (coding)                    :: 3,508
            CDSs (with protein)               :: 3,508
            Genes (RNA)                       :: 66
            rRNAs                             :: 4, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 84
            CDSs (without protein)            :: 84
            Pseudo Genes (ambiguous residues) :: 0 of 84
            Pseudo Genes (frameshifted)       :: 18 of 84
            Pseudo Genes (incomplete)         :: 69 of 84
            Pseudo Genes (internal stop)      :: 7 of 84
            Pseudo Genes (multiple problems)  :: 10 of 84
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3753199
                     /organism="Vreelandella sp. L-1"
                     /mol_type="genomic DNA"
                     /strain="L-1"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472687"
                     /geo_loc_name="Indian Ocean: Southwestern Indian Ridge"
                     /lat_lon="37.93805 S 49.26156 E"
                     /collection_date="2024-05"
WGS         JBSXNS010000001-JBSXNS010000108
WGS_SCAFLD  NZ_JBSXNS010000001-NZ_JBSXNS010000108
//
LOCUS       NZ_JBSXNH010000000   3548948 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Vreelandella sp. L-25, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXNH000000000
VERSION     NZ_JBSXNH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312079
            Assembly: GCF_056857535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vreelandella sp. L-25
  ORGANISM  Vreelandella sp. L-25
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
REFERENCE   1  (bases 1 to 3548948)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXNH000000000.1.
            The Vreelandella sp. L-25 whole genome shotgun (WGS) project has
            the project accession NZ_JBSXNH000000000.  This version of the
            project (01) has the accession number NZ_JBSXNH010000000, and
            consists of sequences JBSXNH010000001-JBSXNH010000093.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 351.25x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857535.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:08:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,470
            CDSs (total)                      :: 3,397
            Genes (coding)                    :: 3,317
            CDSs (with protein)               :: 3,317
            Genes (RNA)                       :: 73
            rRNAs                             :: 5, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 23S)
            partial rRNAs                     :: 4, 1 (16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 25 of 80
            Pseudo Genes (incomplete)         :: 66 of 80
            Pseudo Genes (internal stop)      :: 9 of 80
            Pseudo Genes (multiple problems)  :: 17 of 80
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3548948
                     /organism="Vreelandella sp. L-25"
                     /mol_type="genomic DNA"
                     /strain="L-25"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472698"
                     /geo_loc_name="Indian Ocean: Tianxiu hydrothermal vent
                     field, slow-spreading Carlsberg Ridge, Northwest Indian
                     Ocean"
                     /lat_lon="3.69187 N 63.83227 E"
                     /collection_date="2022-06"
WGS         JBSXNH010000001-JBSXNH010000093
WGS_SCAFLD  NZ_JBSXNH010000001-NZ_JBSXNH010000093
//
LOCUS       NZ_CQAX01000000      4215809 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Yersinia aldovae strain IP07632, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CQAX00000000
VERSION     NZ_CQAX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA1486374
            Assembly: GCF_001122605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia aldovae
  ORGANISM  Yersinia aldovae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1
  AUTHORS   Informatics,Pathogen.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-MAR-2015) SC, Wellcome Trust Sanger Institute, CB10
            1SA, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CQAX00000000.1.
            The Yersinia aldovae whole genome shotgun (WGS) project has the
            project accession NZ_CQAX00000000.  This version of the project
            (01) has the accession number NZ_CQAX01000000, and consists of
            sequences CQAX01000001-CQAX01000060.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001122605.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:12:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,877
            CDSs (total)                      :: 3,782
            Genes (coding)                    :: 3,656
            CDSs (with protein)               :: 3,656
            Genes (RNA)                       :: 95
            rRNAs                             :: 6, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 2 (5S, 16S)
            tRNAs                             :: 72
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 126
            CDSs (without protein)            :: 126
            Pseudo Genes (ambiguous residues) :: 0 of 126
            Pseudo Genes (frameshifted)       :: 46 of 126
            Pseudo Genes (incomplete)         :: 93 of 126
            Pseudo Genes (internal stop)      :: 28 of 126
            Pseudo Genes (multiple problems)  :: 32 of 126
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4215809
                     /organism="Yersinia aldovae"
                     /mol_type="genomic DNA"
                     /strain="IP07632"
                     /serovar="NAG"
                     /isolation_source="water"
                     /host="environmental"
                     /db_xref="taxon:29483"
                     /geo_loc_name="Norway"
                     /collection_date="1900/2008"
WGS         CQAX01000001-CQAX01000060
WGS_SCAFLD  NZ_CQAX01000001-NZ_CQAX01000060
//
LOCUS       NZ_JBXGIO010000000   1896055 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Weissella paramesenteroides strain SL16, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGIO000000000
VERSION     NZ_JBXGIO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44772361
            Assembly: GCF_056855935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Weissella paramesenteroides
  ORGANISM  Weissella paramesenteroides
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (bases 1 to 1896055)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGIO000000000.1.
            The Weissella paramesenteroides whole genome shotgun (WGS) project
            has the project accession NZ_JBXGIO000000000.  This version of the
            project (01) has the accession number NZ_JBXGIO010000000, and
            consists of sequences JBXGIO010000001-JBXGIO010000029.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-FEB-2024
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855935.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:56:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,891
            CDSs (total)                      :: 1,821
            Genes (coding)                    :: 1,808
            CDSs (with protein)               :: 1,808
            Genes (RNA)                       :: 70
            rRNAs                             :: 2, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 4 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 2 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1896055
                     /organism="Weissella paramesenteroides"
                     /mol_type="genomic DNA"
                     /strain="SL16"
                     /isolation_source="bovine ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:1249"
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2023-05-15"
WGS         JBXGIO010000001-JBXGIO010000029
WGS_SCAFLD  NZ_JBXGIO010000001-NZ_JBXGIO010000029
//
LOCUS       NZ_AALE02000000      4885341 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Yersinia frederiksenii ATCC 33641, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AALE00000000
VERSION     NZ_AALE00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00005353
            Assembly: GCF_000168015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia frederiksenii ATCC 33641
  ORGANISM  Yersinia frederiksenii ATCC 33641
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4885341)
  AUTHORS   Read,T.D., Akmal,A., Bishop-Lilly,K., Chen,P.E., Cook,C.,
            Kiley,M.P., Lentz,S., Mateczun,A., Nagarajan,N., Nolan,N.,
            Osborne,B.I., Pop,M., Sozhamannan,S., Stewart,A.C.,
            Sulakvelidze,A., Thomason,B., Willner,K. and Zwick,M.E.
  TITLE     Annotation of the Yersinia frederiksenii ATCC 33641 genome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4885341)
  AUTHORS   Read,T.D., Akmal,A., Bishop-Lilly,K., Chen,P.E., Cook,C.,
            Kiley,M.P., Lentz,S., Mateczun,A., Nagarajan,N., Nolan,N.,
            Osborne,B.I., Pop,M., Sozhamannan,S., Stewart,A.C.,
            Sulakvelidze,A., Thomason,B., Willner,K. and Zwick,M.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2008) Biological Defense Research Directorate,
            12300 Washington Avenue, Rockville, MD 20852, USA
REFERENCE   3  (bases 1 to 4885341)
  AUTHORS   Read,T.D., Zwick,M.E., Tsai,J., Akmal,A., Benitez,M., Clark,C.N.,
            Desany,B.A., Irzyk,G., Kiley,M., Lu,H., Mateczun,A., Perbost,C.S.,
            Vijayadamodar,G.V. and Du,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-OCT-2005) Biological Defense Research Directorate,
            Naval Medical Research Center, Rockville, MD 20851, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AALE00000000.2.
            
            On Jun 2, 2009 this sequence version replaced NZ_AALE00000000.1.
            The Yersinia frederiksenii ATCC 33641 whole genome shotgun (WGS)
            project has the project accession NZ_AALE00000000.  This version of
            the project (02) has the accession number NZ_AALE02000000, and
            consists of sequences AALE02000001-AALE02000161.
            Genome coverage: 31.6X.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Unknown v. before 2010
            Genome Coverage       :: 31.6x
            Sequencing Technology :: Unknown
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000168015.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:16:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,497
            CDSs (total)                      :: 4,415
            Genes (coding)                    :: 4,281
            CDSs (with protein)               :: 4,281
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 4 (16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 134
            CDSs (without protein)            :: 134
            Pseudo Genes (ambiguous residues) :: 0 of 134
            Pseudo Genes (frameshifted)       :: 78 of 134
            Pseudo Genes (incomplete)         :: 66 of 134
            Pseudo Genes (internal stop)      :: 14 of 134
            Pseudo Genes (multiple problems)  :: 22 of 134
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4885341
                     /organism="Yersinia frederiksenii ATCC 33641"
                     /mol_type="genomic DNA"
                     /strain="ATCC 33641"
                     /culture_collection="ATCC:33641"
                     /type_material="type strain of Yersinia frederiksenii"
                     /db_xref="taxon:349966"
WGS         AALE02000001-AALE02000161
WGS_SCAFLD  NZ_AALE02000001-NZ_AALE02000161
//
LOCUS       NZ_AALD02000000      4549461 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Yersinia mollaretii ATCC 43969, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AALD00000000
VERSION     NZ_AALD00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00005358
            Assembly: GCF_000167995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia mollaretii ATCC 43969
  ORGANISM  Yersinia mollaretii ATCC 43969
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4549461)
  AUTHORS   Read,T.D., Akmal,A., Bishop-Lilly,K., Chen,P.E., Cook,C.,
            Kiley,M.P., Lentz,S., Mateczun,A., Nagarajan,N., Nolan,N.,
            Osborne,B.I., Pop,M., Sozhamannan,S., Stewart,A.C.,
            Sulakvelidze,A., Thomason,B., Willner,K. and Zwick,M.E.
  TITLE     Annotation of the Yersinia mollaretii ATCC 43969 genome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4549461)
  AUTHORS   Read,T.D., Akmal,A., Bishop-Lilly,K., Chen,P.E., Cook,C.,
            Kiley,M.P., Lentz,S., Mateczun,A., Nagarajan,N., Nolan,N.,
            Osborne,B.I., Pop,M., Sozhamannan,S., Stewart,A.C.,
            Sulakvelidze,A., Thomason,B., Willner,K. and Zwick,M.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2008) Biological Defense Research Directorate,
            12300 Washington Avenue, Rockville, MD 20852, USA
REFERENCE   3  (bases 1 to 4549461)
  AUTHORS   Read,T.D., Zwick,M.E., Tsai,J., Akmal,A., Benitez,M., Clark,C.N.,
            Desany,B.A., Irzyk,G., Kiley,M., Lu,H., Mateczun,A., Perbost,C.S.,
            Vijayadamodar,G.V. and Du,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-OCT-2005) Biological Defense Research Directorate,
            Naval Medical Research Center, Rockville, MD 20851, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AALD00000000.2.
            
            On Jun 2, 2009 this sequence version replaced NZ_AALD00000000.1.
            The Yersinia mollaretii ATCC 43969 whole genome shotgun (WGS)
            project has the project accession NZ_AALD00000000.  This version of
            the project (02) has the accession number NZ_AALD02000000, and
            consists of sequences AALD02000001-AALD02000179.
            Genome coverage: 41.0X.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Unknown v. before 2010
            Genome Coverage       :: 41.0x
            Sequencing Technology :: Unknown
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000167995.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:20:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,109
            CDSs (total)                      :: 4,033
            Genes (coding)                    :: 3,921
            CDSs (with protein)               :: 3,921
            Genes (RNA)                       :: 76
            rRNAs                             :: 3, 2 (16S, 23S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 58 of 112
            Pseudo Genes (incomplete)         :: 66 of 112
            Pseudo Genes (internal stop)      :: 9 of 112
            Pseudo Genes (multiple problems)  :: 20 of 112
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4549461
                     /organism="Yersinia mollaretii ATCC 43969"
                     /mol_type="genomic DNA"
                     /strain="ATCC 43969"
                     /culture_collection="ATCC:43969"
                     /type_material="type strain of Yersinia mollaretii"
                     /db_xref="taxon:349967"
WGS         AALD02000001-AALD02000179
WGS_SCAFLD  NZ_AALD02000001-NZ_AALD02000179
//
LOCUS       NZ_MKGR01000000      3935399 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Xenorhabdus thuongxuanensis strain 30TX1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MKGR00000000
VERSION     NZ_MKGR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05375129
            Assembly: GCF_001908095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Xenorhabdus thuongxuanensis
  ORGANISM  Xenorhabdus thuongxuanensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (bases 1 to 3935399)
  AUTHORS   Kaempfer,P., Tobias,N.J., Phan Ke,L., Bode,H.B. and Glaeser,S.P.
  TITLE     Xenorhabdus thuongxuanensis sp. nov. and Xenorhabdus eapokensis sp.
            nov., isolated from Steinernema species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3935399)
  AUTHORS   Kaempfer,P., Tobias,N.J., Phan Ke,L., Bode,H.B. and Glaeser,S.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2016) Goethe University, Max-von-Laue Strasse 9,
            Frankfurt Am Main, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MKGR00000000.1.
            The Xenorhabdus thuongxuanensis whole genome shotgun (WGS) project
            has the project accession NZ_MKGR00000000.  This version of the
            project (01) has the accession number NZ_MKGR01000000, and consists
            of sequences MKGR01000001-MKGR01000130.
            Bacteria and source DNA available from DSMZ.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. September 2016
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 15.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001908095.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 10:57:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,664
            CDSs (total)                      :: 3,566
            Genes (coding)                    :: 3,396
            CDSs (with protein)               :: 3,396
            Genes (RNA)                       :: 98
            rRNAs                             :: 7, 3, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2, 9 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 170
            CDSs (without protein)            :: 170
            Pseudo Genes (ambiguous residues) :: 0 of 170
            Pseudo Genes (frameshifted)       :: 42 of 170
            Pseudo Genes (incomplete)         :: 153 of 170
            Pseudo Genes (internal stop)      :: 16 of 170
            Pseudo Genes (multiple problems)  :: 37 of 170
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3935399
                     /organism="Xenorhabdus thuongxuanensis"
                     /mol_type="genomic DNA"
                     /strain="30TX1"
                     /isolation_source="nematodes in the environment"
                     /type_material="type strain of Xenorhabdus
                     thuongxuanensis"
                     /db_xref="taxon:1873484"
WGS         MKGR01000001-MKGR01000130
WGS_SCAFLD  NZ_MKGR01000001-NZ_MKGR01000130
//
LOCUS       NZ_MUBJ01000000      4663685 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Xenorhabdus vietnamensis strain DSM 22392, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MUBJ00000000
VERSION     NZ_MUBJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05375056
            Assembly: GCF_002127535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Xenorhabdus vietnamensis
  ORGANISM  Xenorhabdus vietnamensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (bases 1 to 4663685)
  AUTHORS   Tobias,N.J., Wolff,H., Djahanschiri,B., Pidot,S.J., Stinear,T.P.,
            Ebersberger,I. and Bode,H.B.
  TITLE     Systematic genetic and metabolomic analysis of Xenorhabdus and
            Photorhabdus spp., highlights the requirements for a dual symbiotic
            and pathogenic life style
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4663685)
  AUTHORS   Tobias,N.J., Wolff,H., Djahanschiri,B., Pidot,S.J., Stinear,T.P.,
            Ebersberger,I. and Bode,H.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2016) Institut for Molekulare Biowissenschaften,
            Goethe University, Max-Von-Laue-Str. 9, Frankfurt, Hes 60438,
            Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MUBJ00000000.1.
            The Xenorhabdus vietnamensis whole genome shotgun (WGS) project has
            the project accession NZ_MUBJ00000000.  This version of the project
            (01) has the accession number NZ_MUBJ01000000, and consists of
            sequences MUBJ01000001-MUBJ01000149.
            Bacteria and source DNA available from DSMZ.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. Oct-2016
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002127535.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 11:11:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,156
            CDSs (total)                      :: 4,044
            Genes (coding)                    :: 3,856
            CDSs (with protein)               :: 3,856
            Genes (RNA)                       :: 112
            rRNAs                             :: 18, 1, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 11, 1, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 7 (5S)
            tRNAs                             :: 80
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 188
            CDSs (without protein)            :: 188
            Pseudo Genes (ambiguous residues) :: 0 of 188
            Pseudo Genes (frameshifted)       :: 63 of 188
            Pseudo Genes (incomplete)         :: 138 of 188
            Pseudo Genes (internal stop)      :: 48 of 188
            Pseudo Genes (multiple problems)  :: 52 of 188
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4663685
                     /organism="Xenorhabdus vietnamensis"
                     /mol_type="genomic DNA"
                     /strain="DSM 22392"
                     /host="Steinernema sangi"
                     /culture_collection="DSM:22392"
                     /type_material="type strain of Xenorhabdus vietnamensis"
                     /db_xref="taxon:351656"
                     /geo_loc_name="Viet Nam"
                     /collection_date="2001"
WGS         MUBJ01000001-MUBJ01000149
WGS_SCAFLD  NZ_MUBJ01000001-NZ_MUBJ01000149
//
LOCUS       NZ_RHDS01000000      4981783 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  [Curtobacterium] plantarum strain LMG 16222, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RHDS00000000
VERSION     NZ_RHDS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10290473
            Assembly: GCF_003710245.1
KEYWORDS    WGS; RefSeq.
SOURCE      [Curtobacterium] plantarum
  ORGANISM  [Curtobacterium] plantarum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea.
REFERENCE   1  (bases 1 to 4981783)
  AUTHORS   Lee,J.H., Kim,B.-Y. and Chun,J.
  TITLE     Genome-based reclassification of Curtobacterium plantarum as a
            later heterotypic synonym of Pantoea agglomerans
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4981783)
  AUTHORS   Lee,J.H., Kim,B.-Y. and Chun,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2018) Research Institute, Chunlab, 6F, JW TOWER,
            2477, Nambusunhwan-ro, Seocho-gu, Seoul 06725, Korea, Republic of
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RHDS00000000.1.
            The [Curtobacterium] plantarum whole genome shotgun (WGS) project
            has the project accession NZ_RHDS00000000.  This version of the
            project (01) has the accession number NZ_RHDS01000000, and consists
            of sequences RHDS01000001-RHDS01000028.
            Bacteria and source DNA available from LMG 16222.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: OCT-2018
            Assembly Method        :: SPAdes v. 3.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 104.38x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003710245.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:18:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,709
            CDSs (total)                      :: 4,619
            Genes (coding)                    :: 4,550
            CDSs (with protein)               :: 4,550
            Genes (RNA)                       :: 90
            rRNAs                             :: 7, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 2 (5S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 25 of 69
            Pseudo Genes (incomplete)         :: 48 of 69
            Pseudo Genes (internal stop)      :: 15 of 69
            Pseudo Genes (multiple problems)  :: 16 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4981783
                     /organism="[Curtobacterium] plantarum"
                     /mol_type="genomic DNA"
                     /strain="LMG 16222"
                     /isolation_source="plant"
                     /type_material="type strain of Curtobacterium plantarum"
                     /db_xref="taxon:221276"
WGS         RHDS01000001-RHDS01000028
WGS_SCAFLD  NZ_RHDS01000001-NZ_RHDS01000028
//
LOCUS       NZ_CAADJK010000000   4618070 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Yersinia enterocolitica strain NCTC10938, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CAADJK000000000
VERSION     NZ_CAADJK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2709014
            Assembly: GCF_900706915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia enterocolitica
  ORGANISM  Yersinia enterocolitica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1
  CONSRTM   Pathogen Informatics
  TITLE     Direct Submission
  JOURNAL   Submitted (07-MAR-2019) WTSI, Pathogen Informatics, Wellcome Trust
            Sanger Institute, CB10 1SA, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAADJK000000000.1.
            The Yersinia enterocolitica whole genome shotgun (WGS) project has
            the project accession NZ_CAADJK000000000.  This version of the
            project (01) has the accession number NZ_CAADJK010000000, and
            consists of sequences CAADJK010000001-CAADJK010000004.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900706915.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 12:34:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,261
            CDSs (total)                      :: 4,142
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 119
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 136
            CDSs (without protein)            :: 136
            Pseudo Genes (ambiguous residues) :: 0 of 136
            Pseudo Genes (frameshifted)       :: 62 of 136
            Pseudo Genes (incomplete)         :: 89 of 136
            Pseudo Genes (internal stop)      :: 24 of 136
            Pseudo Genes (multiple problems)  :: 32 of 136
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4618070
                     /organism="Yersinia enterocolitica"
                     /mol_type="genomic DNA"
                     /strain="NCTC10938"
                     /serovar="8"
                     /isolation_source="Blood"
                     /host="Homo sapiens"
                     /culture_collection="NCTC:10938"
                     /db_xref="taxon:630"
                     /geo_loc_name="USA"
WGS         CAADJK010000001-CAADJK010000004
WGS_SCAFLD  NZ_CAADJK010000001-NZ_CAADJK010000004
//
LOCUS       NZ_JAASAJ010000000   4618139 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Yersinia mollaretii strain SCPM-O-B-7596 (846/98), whole genome
            shotgun sequencing project.
ACCESSION   NZ_JAASAJ000000000
VERSION     NZ_JAASAJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14409513
            Assembly: GCF_011765205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia mollaretii
  ORGANISM  Yersinia mollaretii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4618139)
  AUTHORS   Kislichkina,A., Dentovskaya,S., Shaikhutdinov,R., Ivanov,S.,
            Sizova,A., Solomentsev,V. and Bogun,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2020) Science Department, SRCAMB, Building 1,
            Obolensk, Moscow Region 142279, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAASAJ000000000.1.
            The Yersinia mollaretii whole genome shotgun (WGS) project has the
            project accession NZ_JAASAJ000000000.  This version of the project
            (01) has the accession number NZ_JAASAJ010000000, and consists of
            sequences JAASAJ010000001-JAASAJ010000030.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 39x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_011765205.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:01:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,193
            CDSs (total)                      :: 4,110
            Genes (coding)                    :: 4,034
            CDSs (with protein)               :: 4,034
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 1 (5S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 34 of 76
            Pseudo Genes (incomplete)         :: 59 of 76
            Pseudo Genes (internal stop)      :: 5 of 76
            Pseudo Genes (multiple problems)  :: 22 of 76
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4618139
                     /organism="Yersinia mollaretii"
                     /mol_type="genomic DNA"
                     /strain="SCPM-O-B-7596 (846/98)"
                     /db_xref="taxon:33060"
WGS         JAASAJ010000001-JAASAJ010000030
WGS_SCAFLD  NZ_JAASAJ010000001-NZ_JAASAJ010000030
//
LOCUS       NZ_CBCKRM010000000   2822271 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Zwartia sp. isolate
            PELAGICS-MAG-m2-bin108389-KLICE-SM-11aug21., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBCKRM000000000
VERSION     NZ_CBCKRM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117452230
            Assembly: GCF_965085325.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Zwartia sp. (freshwater metagenome)
  ORGANISM  Zwartia sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Zwartia.
REFERENCE   1  (bases 1 to 2822271)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JAN-2025) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBCKRM000000000.1.
            The Zwartia sp. whole genome shotgun (WGS) project has the project
            accession NZ_CBCKRM000000000.  This version of the project (01) has
            the accession number NZ_CBCKRM010000000, and consists of sequences
            CBCKRM010000001-CBCKRM010000133.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_965085325.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:24:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,812
            CDSs (total)                      :: 2,764
            Genes (coding)                    :: 2,716
            CDSs (with protein)               :: 2,716
            Genes (RNA)                       :: 48
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 1 of 48
            Pseudo Genes (incomplete)         :: 46 of 48
            Pseudo Genes (internal stop)      :: 2 of 48
            Pseudo Genes (multiple problems)  :: 1 of 48
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2822271
                     /organism="Zwartia sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-m2-bin108389-KLICE-SM-11aug21."
                     /isolation_source="Klicava reservoir"
                     /db_xref="taxon:2978004"
                     /environmental_sample
                     /geo_loc_name="Czechia"
                     /collection_date="2021-08-11"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBCKRM010000001-CBCKRM010000133
WGS_SCAFLD  NZ_CBCKRM010000001-NZ_CBCKRM010000133
//
LOCUS       NZ_CBCEPT010000000   2707517 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Zwartia sp. isolate
            PELAGICS-MAG-m2-bin129558-ZLUTE-SM-2nov21., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBCEPT000000000
VERSION     NZ_CBCEPT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117452318
            Assembly: GCF_965043315.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Zwartia sp. (freshwater metagenome)
  ORGANISM  Zwartia sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Zwartia.
REFERENCE   1  (bases 1 to 2707517)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JAN-2025) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBCEPT000000000.1.
            The Zwartia sp. whole genome shotgun (WGS) project has the project
            accession NZ_CBCEPT000000000.  This version of the project (01) has
            the accession number NZ_CBCEPT010000000, and consists of sequences
            CBCEPT010000001-CBCEPT010000374.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_965043315.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:29:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,882
            CDSs (total)                      :: 2,850
            Genes (coding)                    :: 2,761
            CDSs (with protein)               :: 2,761
            Genes (RNA)                       :: 32
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 27
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 89
            CDSs (without protein)            :: 89
            Pseudo Genes (ambiguous residues) :: 0 of 89
            Pseudo Genes (frameshifted)       :: 2 of 89
            Pseudo Genes (incomplete)         :: 88 of 89
            Pseudo Genes (internal stop)      :: 0 of 89
            Pseudo Genes (multiple problems)  :: 1 of 89
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2707517
                     /organism="Zwartia sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-m2-bin129558-ZLUTE-SM-2nov21."
                     /isolation_source="Zlutice reservoir"
                     /db_xref="taxon:2978004"
                     /environmental_sample
                     /geo_loc_name="Czechia"
                     /collection_date="2021-11-02"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBCEPT010000001-CBCEPT010000374
WGS_SCAFLD  NZ_CBCEPT010000001-NZ_CBCEPT010000374
//
LOCUS       NZ_CBABDS010000000   2720157 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Zwartia sp. isolate
            PELAGICS-MAG-m2-bin108825-KLICE-SM-3nov21., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBABDS000000000
VERSION     NZ_CBABDS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117452304
            Assembly: GCF_964668665.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Zwartia sp. (freshwater metagenome)
  ORGANISM  Zwartia sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Zwartia.
REFERENCE   1  (bases 1 to 2720157)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-DEC-2024) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBABDS000000000.1.
            The Zwartia sp. whole genome shotgun (WGS) project has the project
            accession NZ_CBABDS000000000.  This version of the project (01) has
            the accession number NZ_CBABDS010000000, and consists of sequences
            CBABDS010000001-CBABDS010000160.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964668665.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:37:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,714
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,634
            CDSs (with protein)               :: 2,634
            Genes (RNA)                       :: 41
            tRNAs                             :: 37
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 1 of 39
            Pseudo Genes (incomplete)         :: 39 of 39
            Pseudo Genes (internal stop)      :: 0 of 39
            Pseudo Genes (multiple problems)  :: 1 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2720157
                     /organism="Zwartia sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-m2-bin108825-KLICE-SM-3nov21."
                     /isolation_source="Klicava reservoir"
                     /db_xref="taxon:2978004"
                     /environmental_sample
                     /geo_loc_name="Czechia"
                     /collection_date="2021-11-03"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBABDS010000001-CBABDS010000160
WGS_SCAFLD  NZ_CBABDS010000001-NZ_CBABDS010000160
//
LOCUS       NZ_CDTGFB010000000   4507651 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Alloalcanivorax profundimaris isolate MarMAG_090573, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CDTGFB000000000
VERSION     NZ_CDTGFB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120696237
            Assembly: GCF_977323805.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Alloalcanivorax profundimaris (marine metagenome)
  ORGANISM  Alloalcanivorax profundimaris
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Alcanivoracaceae; Alloalcanivorax.
REFERENCE   1  (bases 1 to 4507651)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDTGFB000000000.1.
            The Alloalcanivorax profundimaris whole genome shotgun (WGS)
            project has the project accession NZ_CDTGFB000000000.  This version
            of the project (01) has the accession number NZ_CDTGFB010000000,
            and consists of sequences CDTGFB010000001-CDTGFB010000239.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977323805.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 01:29:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,366
            CDSs (total)                      :: 4,327
            Genes (coding)                    :: 4,272
            CDSs (with protein)               :: 4,272
            Genes (RNA)                       :: 39
            tRNAs                             :: 35
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 55
            CDSs (without protein)            :: 55
            Pseudo Genes (ambiguous residues) :: 0 of 55
            Pseudo Genes (frameshifted)       :: 12 of 55
            Pseudo Genes (incomplete)         :: 45 of 55
            Pseudo Genes (internal stop)      :: 3 of 55
            Pseudo Genes (multiple problems)  :: 4 of 55
            CRISPR Arrays                     :: 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4507651
                     /organism="Alloalcanivorax profundimaris"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_090573"
                     /db_xref="taxon:2735259"
                     /environmental_sample
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDTGFB010000001-CDTGFB010000239
WGS_SCAFLD  NZ_CDTGFB010000001-NZ_CDTGFB010000239
//
LOCUS       NZ_FNEK01000000      5811514 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aliiruegeria lutimaris strain DSM 25294, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNEK00000000
VERSION     NZ_FNEK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04488026
            Assembly: GCF_900099935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aliiruegeria lutimaris
  ORGANISM  Aliiruegeria lutimaris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Aliiruegeria.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNEK00000000.1.
            The Aliiruegeria lutimaris whole genome shotgun (WGS) project has
            the project accession NZ_FNEK00000000.  This version of the project
            (01) has the accession number NZ_FNEK01000000, and consists of
            sequences FNEK01000001-FNEK01000193.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900099935.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:06:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,774
            CDSs (total)                      :: 5,720
            Genes (coding)                    :: 5,490
            CDSs (with protein)               :: 5,490
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 230
            CDSs (without protein)            :: 230
            Pseudo Genes (ambiguous residues) :: 0 of 230
            Pseudo Genes (frameshifted)       :: 41 of 230
            Pseudo Genes (incomplete)         :: 188 of 230
            Pseudo Genes (internal stop)      :: 38 of 230
            Pseudo Genes (multiple problems)  :: 33 of 230
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5811514
                     /organism="Aliiruegeria lutimaris"
                     /mol_type="genomic DNA"
                     /strain="DSM 25294"
                     /type_material="type strain of Pseudoruegeria lutimaris"
                     /db_xref="taxon:571298"
WGS         FNEK01000001-FNEK01000193
WGS_SCAFLD  NZ_FNEK01000001-NZ_FNEK01000193
//
LOCUS       NZ_FNIL01000000      3777690 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Alkalicoccus daliensis strain CGMCC 1.10369, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNIL00000000
VERSION     NZ_FNIL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04488053
            Assembly: GCF_900103955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Alkalicoccus daliensis
  ORGANISM  Alkalicoccus daliensis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Alkalicoccus.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNIL00000000.1.
            The Alkalicoccus daliensis whole genome shotgun (WGS) project has
            the project accession NZ_FNIL00000000.  This version of the project
            (01) has the accession number NZ_FNIL01000000, and consists of
            sequences FNIL01000001-FNIL01000028.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900103955.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:01:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,542
            CDSs (total)                      :: 3,473
            Genes (coding)                    :: 3,458
            CDSs (with protein)               :: 3,458
            Genes (RNA)                       :: 69
            rRNAs                             :: 5, 5, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 5, 1 (16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 15
            CDSs (without protein)            :: 15
            Pseudo Genes (ambiguous residues) :: 0 of 15
            Pseudo Genes (frameshifted)       :: 4 of 15
            Pseudo Genes (incomplete)         :: 12 of 15
            Pseudo Genes (internal stop)      :: 0 of 15
            Pseudo Genes (multiple problems)  :: 1 of 15
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3777690
                     /organism="Alkalicoccus daliensis"
                     /mol_type="genomic DNA"
                     /strain="CGMCC 1.10369"
                     /type_material="type strain of Bacillus daliensis"
                     /db_xref="taxon:745820"
WGS         FNIL01000001-FNIL01000028
WGS_SCAFLD  NZ_FNIL01000001-NZ_FNIL01000028
//
LOCUS       NZ_CBBGVW010000000   2890830 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Zwartia sp. isolate
            PELAGICS-MAG-vs-bin044899-BANYH-SM-28mar22., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBBGVW000000000
VERSION     NZ_CBBGVW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117452534
            Assembly: GCF_964882935.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Zwartia sp. (freshwater metagenome)
  ORGANISM  Zwartia sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Zwartia.
REFERENCE   1  (bases 1 to 2890830)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JAN-2025) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBBGVW000000000.1.
            The Zwartia sp. whole genome shotgun (WGS) project has the project
            accession NZ_CBBGVW000000000.  This version of the project (01) has
            the accession number NZ_CBBGVW010000000, and consists of sequences
            CBBGVW010000001-CBBGVW010000110.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964882935.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:46:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,916
            CDSs (total)                      :: 2,875
            Genes (coding)                    :: 2,829
            CDSs (with protein)               :: 2,829
            Genes (RNA)                       :: 41
            rRNAs                             :: 2 (5S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 35
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 8 of 46
            Pseudo Genes (incomplete)         :: 39 of 46
            Pseudo Genes (internal stop)      :: 3 of 46
            Pseudo Genes (multiple problems)  :: 4 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2890830
                     /organism="Zwartia sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-vs-bin044899-BANYH-SM-28mar22."
                     /isolation_source="Banyoles lake"
                     /db_xref="taxon:2978004"
                     /environmental_sample
                     /geo_loc_name="Spain"
                     /collection_date="2022-03-28"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBBGVW010000001-CBBGVW010000110
WGS_SCAFLD  NZ_CBBGVW010000001-NZ_CBBGVW010000110
//
LOCUS       NZ_FNBZ01000000      5279103 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Allobosea robiniae strain DSM 26672, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNBZ00000000
VERSION     NZ_FNBZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05421844
            Assembly: GCF_900102525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Allobosea robiniae
  ORGANISM  Allobosea robiniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Alloboseaceae; Allobosea.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNBZ00000000.1.
            The Allobosea robiniae whole genome shotgun (WGS) project has the
            project accession NZ_FNBZ00000000.  This version of the project
            (01) has the accession number NZ_FNBZ01000000, and consists of
            sequences FNBZ01000001-FNBZ01000021.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900102525.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:16:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,098
            CDSs (total)                      :: 5,044
            Genes (coding)                    :: 5,010
            CDSs (with protein)               :: 5,010
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 8 of 34
            Pseudo Genes (incomplete)         :: 28 of 34
            Pseudo Genes (internal stop)      :: 3 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5279103
                     /organism="Allobosea robiniae"
                     /mol_type="genomic DNA"
                     /strain="DSM 26672"
                     /type_material="type strain of Bosea robiniae"
                     /db_xref="taxon:1036780"
WGS         FNBZ01000001-FNBZ01000021
WGS_SCAFLD  NZ_FNBZ01000001-NZ_FNBZ01000021
//
LOCUS       NZ_FMYC01000000      5610209 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Agrobacterium fabrum strain NFIX02, whole genome shotgun sequencing
            project.
ACCESSION   NZ_FMYC00000000
VERSION     NZ_FMYC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03159422
            Assembly: GCF_900104545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium fabrum
  ORGANISM  Agrobacterium fabrum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium; Agrobacterium tumefaciens complex.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FMYC00000000.1.
            The Agrobacterium fabrum whole genome shotgun (WGS) project has the
            project accession NZ_FMYC00000000.  This version of the project
            (01) has the accession number NZ_FMYC01000000, and consists of
            sequences FMYC01000001-FMYC01000034.
            The organism was changed from 'Rhizobium sp. NFIX02' to
            'Agrobacterium fabrum' in March  2020.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_900104545.1
            Current Name        :: Agrobacterium fabrum
            Previous Name       :: Rhizobium sp. NFIX02
            Date Updated        :: 2020-03-09
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_000092025.1
            A1 Name             :: Agrobacterium fabrum
            A1 ANI              :: 97.93%
            A1 Query Coverage   :: 91.9%
            A1 Subject Coverage :: 90.86%
            Analysis 2 (A2)     :: Query vs. NO-TYPE genome for previous name
            A2 Genome (subject) :: no type
            A2 Name             :: Rhizobium sp. NFIX02
            A2 ANI              :: 0%
            A2 Query Coverage   :: 0%
            A2 Subject Coverage :: 0%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900104545.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:17:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,339
            CDSs (total)                      :: 5,284
            Genes (coding)                    :: 5,193
            CDSs (with protein)               :: 5,193
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 33 of 91
            Pseudo Genes (incomplete)         :: 70 of 91
            Pseudo Genes (internal stop)      :: 12 of 91
            Pseudo Genes (multiple problems)  :: 20 of 91
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5610209
                     /organism="Agrobacterium fabrum"
                     /mol_type="genomic DNA"
                     /strain="NFIX02"
                     /db_xref="taxon:1176649"
WGS         FMYC01000001-FMYC01000034
WGS_SCAFLD  NZ_FMYC01000001-NZ_FMYC01000034
//
LOCUS       NZ_CBBUUG010000000   2769629 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Zwartia sp. isolate
            PELAGICS-MAG-m2-bin117403-RIMVE-SM-08jun20., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBBUUG000000000
VERSION     NZ_CBBUUG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117452387
            Assembly: GCF_964977075.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Zwartia sp. (freshwater metagenome)
  ORGANISM  Zwartia sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Zwartia.
REFERENCE   1  (bases 1 to 2769629)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JAN-2025) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBBUUG000000000.1.
            The Zwartia sp. whole genome shotgun (WGS) project has the project
            accession NZ_CBBUUG000000000.  This version of the project (01) has
            the accession number NZ_CBBUUG010000000, and consists of sequences
            CBBUUG010000001-CBBUUG010000258.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964977075.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:48:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,862
            CDSs (total)                      :: 2,818
            Genes (coding)                    :: 2,759
            CDSs (with protein)               :: 2,759
            Genes (RNA)                       :: 44
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 39
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 1 of 59
            Pseudo Genes (incomplete)         :: 59 of 59
            Pseudo Genes (internal stop)      :: 2 of 59
            Pseudo Genes (multiple problems)  :: 3 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2769629
                     /organism="Zwartia sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-m2-bin117403-RIMVE-SM-08jun20."
                     /isolation_source="Rimov reservoir"
                     /db_xref="taxon:2978004"
                     /environmental_sample
                     /geo_loc_name="Czechia"
                     /collection_date="2020-06-08"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBBUUG010000001-CBBUUG010000258
WGS_SCAFLD  NZ_CBBUUG010000001-NZ_CBBUUG010000258
//
LOCUS       NZ_FNOB01000000      4280579 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Allgaiera indica strain DSM 24802, whole genome shotgun sequencing
            project.
ACCESSION   NZ_FNOB00000000
VERSION     NZ_FNOB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05444006
            Assembly: GCF_900106675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Allgaiera indica
  ORGANISM  Allgaiera indica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Allgaiera.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNOB00000000.1.
            The Allgaiera indica whole genome shotgun (WGS) project has the
            project accession NZ_FNOB00000000.  This version of the project
            (01) has the accession number NZ_FNOB01000000, and consists of
            sequences FNOB01000001-FNOB01000077.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900106675.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:15:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,206
            CDSs (total)                      :: 4,156
            Genes (coding)                    :: 4,008
            CDSs (with protein)               :: 4,008
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 148
            CDSs (without protein)            :: 148
            Pseudo Genes (ambiguous residues) :: 0 of 148
            Pseudo Genes (frameshifted)       :: 60 of 148
            Pseudo Genes (incomplete)         :: 107 of 148
            Pseudo Genes (internal stop)      :: 23 of 148
            Pseudo Genes (multiple problems)  :: 37 of 148
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4280579
                     /organism="Allgaiera indica"
                     /mol_type="genomic DNA"
                     /strain="DSM 24802"
                     /type_material="type strain of Defluviimonas indica"
                     /db_xref="taxon:765699"
WGS         FNOB01000001-FNOB01000077
WGS_SCAFLD  NZ_FNOB01000001-NZ_FNOB01000077
//
LOCUS       NZ_JAASAK010000000   4290290 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Yersinia aleksiciae strain SCPM-O-B-8086 (J332), whole genome
            shotgun sequencing project.
ACCESSION   NZ_JAASAK000000000
VERSION     NZ_JAASAK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14409512
            Assembly: GCF_011765225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia aleksiciae
  ORGANISM  Yersinia aleksiciae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4290290)
  AUTHORS   Kislichkina,A., Dentovskaya,S., Shaikhutdinov,R., Ivanov,S.,
            Sizova,A., Solomentsev,V. and Bogun,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2020) Science Department, SRCAMB, Building 1,
            Obolensk, Moscow Region 142279, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAASAK000000000.1.
            The Yersinia aleksiciae whole genome shotgun (WGS) project has the
            project accession NZ_JAASAK000000000.  This version of the project
            (01) has the accession number NZ_JAASAK010000000, and consists of
            sequences JAASAK010000001-JAASAK010000098.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 82x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_011765225.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 13:01:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,006
            CDSs (total)                      :: 3,925
            Genes (coding)                    :: 3,860
            CDSs (with protein)               :: 3,860
            Genes (RNA)                       :: 81
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 16 of 65
            Pseudo Genes (incomplete)         :: 55 of 65
            Pseudo Genes (internal stop)      :: 10 of 65
            Pseudo Genes (multiple problems)  :: 14 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4290290
                     /organism="Yersinia aleksiciae"
                     /mol_type="genomic DNA"
                     /strain="SCPM-O-B-8086 (J332)"
                     /db_xref="taxon:263819"
WGS         JAASAK010000001-JAASAK010000098
WGS_SCAFLD  NZ_JAASAK010000001-NZ_JAASAK010000098
//
LOCUS       NZ_FNEW01000000      5582960 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Agrobacterium fabrum strain PDC82, whole genome shotgun sequencing
            project.
ACCESSION   NZ_FNEW00000000
VERSION     NZ_FNEW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05428983
            Assembly: GCF_900100235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium fabrum
  ORGANISM  Agrobacterium fabrum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium; Agrobacterium tumefaciens complex.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNEW00000000.1.
            The Agrobacterium fabrum whole genome shotgun (WGS) project has the
            project accession NZ_FNEW00000000.  This version of the project
            (01) has the accession number NZ_FNEW01000000, and consists of
            sequences FNEW01000001-FNEW01000017.
            The organism was changed from 'Rhizobium sp. PDC82' to
            'Agrobacterium fabrum' in March  2020.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_900100235.1
            Current Name        :: Agrobacterium fabrum
            Previous Name       :: Rhizobium sp. PDC82
            Date Updated        :: 2020-03-09
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_000092025.1
            A1 Name             :: Agrobacterium fabrum
            A1 ANI              :: 97.64%
            A1 Query Coverage   :: 87.54%
            A1 Subject Coverage :: 86.13%
            Analysis 2 (A2)     :: Query vs. NO-TYPE genome for previous name
            A2 Genome (subject) :: no type
            A2 Name             :: Rhizobium sp. PDC82
            A2 ANI              :: 0%
            A2 Query Coverage   :: 0%
            A2 Subject Coverage :: 0%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900100235.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:24:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,260
            CDSs (total)                      :: 5,207
            Genes (coding)                    :: 5,160
            CDSs (with protein)               :: 5,160
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 47
            CDSs (without protein)            :: 47
            Pseudo Genes (ambiguous residues) :: 0 of 47
            Pseudo Genes (frameshifted)       :: 20 of 47
            Pseudo Genes (incomplete)         :: 35 of 47
            Pseudo Genes (internal stop)      :: 4 of 47
            Pseudo Genes (multiple problems)  :: 10 of 47
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5582960
                     /organism="Agrobacterium fabrum"
                     /mol_type="genomic DNA"
                     /strain="PDC82"
                     /db_xref="taxon:1176649"
WGS         FNEW01000001-FNEW01000017
WGS_SCAFLD  NZ_FNEW01000001-NZ_FNEW01000017
//
LOCUS       NZ_FOGA01000000      5605136 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Agrobacterium fabrum strain NFIX01, whole genome shotgun sequencing
            project.
ACCESSION   NZ_FOGA00000000
VERSION     NZ_FOGA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03159504
            Assembly: GCF_900111085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium fabrum
  ORGANISM  Agrobacterium fabrum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium; Agrobacterium tumefaciens complex.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOGA00000000.1.
            The Agrobacterium fabrum whole genome shotgun (WGS) project has the
            project accession NZ_FOGA00000000.  This version of the project
            (01) has the accession number NZ_FOGA01000000, and consists of
            sequences FOGA01000001-FOGA01000035.
            The organism was changed from 'Rhizobium sp. NFIX01' to
            'Agrobacterium fabrum' in March  2020.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_900111085.1
            Current Name        :: Agrobacterium fabrum
            Previous Name       :: Rhizobium sp. NFIX01
            Date Updated        :: 2020-03-09
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_000092025.1
            A1 Name             :: Agrobacterium fabrum
            A1 ANI              :: 97.93%
            A1 Query Coverage   :: 92%
            A1 Subject Coverage :: 90.88%
            Analysis 2 (A2)     :: Query vs. NO-TYPE genome for previous name
            A2 Genome (subject) :: no type
            A2 Name             :: Rhizobium sp. NFIX01
            A2 ANI              :: 0%
            A2 Query Coverage   :: 0%
            A2 Subject Coverage :: 0%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900111085.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:32:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,344
            CDSs (total)                      :: 5,287
            Genes (coding)                    :: 5,198
            CDSs (with protein)               :: 5,198
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 89
            CDSs (without protein)            :: 89
            Pseudo Genes (ambiguous residues) :: 0 of 89
            Pseudo Genes (frameshifted)       :: 33 of 89
            Pseudo Genes (incomplete)         :: 66 of 89
            Pseudo Genes (internal stop)      :: 13 of 89
            Pseudo Genes (multiple problems)  :: 19 of 89
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5605136
                     /organism="Agrobacterium fabrum"
                     /mol_type="genomic DNA"
                     /strain="NFIX01"
                     /db_xref="taxon:1176649"
WGS         FOGA01000001-FOGA01000035
WGS_SCAFLD  NZ_FOGA01000001-NZ_FOGA01000035
//
LOCUS       NZ_FOAN01000000      6128076 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Allobosea lupini strain LMG 26383,CCUG 61248,R- 45681, whole genome
            shotgun sequencing project.
ACCESSION   NZ_FOAN00000000
VERSION     NZ_FOAN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04515666
            Assembly: GCF_900109525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Allobosea lupini
  ORGANISM  Allobosea lupini
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Alloboseaceae; Allobosea.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOAN00000000.1.
            The Allobosea lupini whole genome shotgun (WGS) project has the
            project accession NZ_FOAN00000000.  This version of the project
            (01) has the accession number NZ_FOAN01000000, and consists of
            sequences FOAN01000001-FOAN01000024.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900109525.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:37:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,032
            CDSs (total)                      :: 5,978
            Genes (coding)                    :: 5,923
            CDSs (with protein)               :: 5,923
            Genes (RNA)                       :: 54
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 55
            CDSs (without protein)            :: 55
            Pseudo Genes (ambiguous residues) :: 0 of 55
            Pseudo Genes (frameshifted)       :: 24 of 55
            Pseudo Genes (incomplete)         :: 42 of 55
            Pseudo Genes (internal stop)      :: 7 of 55
            Pseudo Genes (multiple problems)  :: 15 of 55
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6128076
                     /organism="Allobosea lupini"
                     /mol_type="genomic DNA"
                     /strain="LMG 26383,CCUG 61248,R- 45681"
                     /db_xref="taxon:1036779"
WGS         FOAN01000001-FOAN01000024
WGS_SCAFLD  NZ_FOAN01000001-NZ_FOAN01000024
//
LOCUS       NZ_JBXEQF010000000   3434540 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Yoonia sp. KMU-150, whole genome shotgun sequencing project.
ACCESSION   NZ_JBXEQF000000000
VERSION     NZ_JBXEQF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56644616
            Assembly: GCF_056858355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yoonia sp. KMU-150
  ORGANISM  Yoonia sp. KMU-150
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Yoonia.
REFERENCE   1  (bases 1 to 3434540)
  AUTHORS   Yoon,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2026) College of Pharmacy, Keimyung University,
            1095 Dalgubeoldaero, Dalseo-gu, Daegu si 42601, South Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXEQF000000000.1.
            The Yoonia sp. KMU-150 whole genome shotgun (WGS) project has the
            project accession NZ_JBXEQF000000000.  This version of the project
            (01) has the accession number NZ_JBXEQF010000000, and consists of
            sequences JBXEQF010000001-JBXEQF010000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 764.9x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056858355.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:30:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,441
            CDSs (total)                      :: 3,388
            Genes (coding)                    :: 3,384
            CDSs (with protein)               :: 3,384
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 1 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 0 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3434540
                     /organism="Yoonia sp. KMU-150"
                     /mol_type="genomic DNA"
                     /strain="KMU-150"
                     /isolation_source="seawater"
                     /db_xref="taxon:3479382"
                     /geo_loc_name="South Korea: Jeju"
                     /collection_date="2018-04"
WGS         JBXEQF010000001-JBXEQF010000005
WGS_SCAFLD  NZ_JBXEQF010000001-NZ_JBXEQF010000005
//
LOCUS       NZ_FPBF01000000      5423918 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Algoriphagus locisalis strain DSM 23445, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FPBF00000000
VERSION     NZ_FPBF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04489724
            Assembly: GCF_900116615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Algoriphagus locisalis
  ORGANISM  Algoriphagus locisalis
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Algoriphagus.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FPBF00000000.1.
            The Algoriphagus locisalis whole genome shotgun (WGS) project has
            the project accession NZ_FPBF00000000.  This version of the project
            (01) has the accession number NZ_FPBF01000000, and consists of
            sequences FPBF01000001-FPBF01000017.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900116615.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:42:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,669
            CDSs (total)                      :: 4,621
            Genes (coding)                    :: 4,603
            CDSs (with protein)               :: 4,603
            Genes (RNA)                       :: 48
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 18
            CDSs (without protein)            :: 18
            Pseudo Genes (ambiguous residues) :: 0 of 18
            Pseudo Genes (frameshifted)       :: 5 of 18
            Pseudo Genes (incomplete)         :: 13 of 18
            Pseudo Genes (internal stop)      :: 3 of 18
            Pseudo Genes (multiple problems)  :: 2 of 18
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5423918
                     /organism="Algoriphagus locisalis"
                     /mol_type="genomic DNA"
                     /strain="DSM 23445"
                     /type_material="type strain of Algoriphagus locisalis"
                     /db_xref="taxon:305507"
WGS         FPBF01000001-FPBF01000017
WGS_SCAFLD  NZ_FPBF01000001-NZ_FPBF01000017
//
LOCUS       NZ_JAAKSU010000000   4617546 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas veronii strain 601210, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAAKSU000000000
VERSION     NZ_JAAKSU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14146743
            Assembly: GCF_049174075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas veronii (Aeromonas ichthiosmia)
  ORGANISM  Aeromonas veronii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4617546)
  AUTHORS   Hazen,T.H., Michalski,J.M., Tennant,S. and Rasko,D.A.
  TITLE     Genome sequencing of Aeromonas species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4617546)
  AUTHORS   Hazen,T.H., Michalski,J.M., Tennant,S. and Rasko,D.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2020) Institute for Genome Sciences, University
            of Maryland, School of Medicine, 670 W. Baltimore St., Baltimore,
            MD 21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAKSU000000000.1.
            The Aeromonas veronii whole genome shotgun (WGS) project has the
            project accession NZ_JAAKSU000000000.  This version of the project
            (01) has the accession number NZ_JAAKSU010000000, and consists of
            sequences JAAKSU010000001-JAAKSU010000040.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 209.7878756378388x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049174075.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:54:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,286
            CDSs (total)                      :: 4,205
            Genes (coding)                    :: 4,165
            CDSs (with protein)               :: 4,165
            Genes (RNA)                       :: 81
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 70
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 40
            CDSs (without protein)            :: 40
            Pseudo Genes (ambiguous residues) :: 0 of 40
            Pseudo Genes (frameshifted)       :: 14 of 40
            Pseudo Genes (incomplete)         :: 27 of 40
            Pseudo Genes (internal stop)      :: 11 of 40
            Pseudo Genes (multiple problems)  :: 9 of 40
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4617546
                     /organism="Aeromonas veronii"
                     /mol_type="genomic DNA"
                     /strain="601210"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:654"
                     /geo_loc_name="Bangladesh"
                     /lat_lon="23.6850 N 90.3563 E"
                     /collected_by="University of Maryland, School of Medicine,
                     Center for Vaccine Development"
WGS         JAAKSU010000001-JAAKSU010000040
WGS_SCAFLD  NZ_JAAKSU010000001-NZ_JAAKSU010000040
//
LOCUS       NZ_JBSXOK010000000   5006433 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Zunongwangia sp. L-65, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSXOK000000000
VERSION     NZ_JBSXOK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53312088
            Assembly: GCF_056859415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Zunongwangia sp. L-65
  ORGANISM  Zunongwangia sp. L-65
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Zunongwangia.
REFERENCE   1  (bases 1 to 5006433)
  AUTHORS   Liu,M. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Key Laboratory of Marine Ecosystem
            Dynamics, Ministry of Natural Resources, Second Institute of
            Oceanography, No. 36 Baochu North Road, Hangzhou 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSXOK000000000.1.
            The Zunongwangia sp. L-65 whole genome shotgun (WGS) project has
            the project accession NZ_JBSXOK000000000.  This version of the
            project (01) has the accession number NZ_JBSXOK010000000, and
            consists of sequences JBSXOK010000001-JBSXOK010000084.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 238.36x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056859415.1-RS_2026_04_23
            Annotation Date                   :: 04/23/2026 14:21:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,428
            CDSs (total)                      :: 4,377
            Genes (coding)                    :: 4,313
            CDSs (with protein)               :: 4,313
            Genes (RNA)                       :: 51
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 16 of 64
            Pseudo Genes (incomplete)         :: 46 of 64
            Pseudo Genes (internal stop)      :: 10 of 64
            Pseudo Genes (multiple problems)  :: 7 of 64
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5006433
                     /organism="Zunongwangia sp. L-65"
                     /mol_type="genomic DNA"
                     /strain="L-65"
                     /isolation_source="ENVO:01000129"
                     /db_xref="taxon:3472707"
                     /geo_loc_name="Indian Ocean: Southwestern Indian Ridge"
                     /lat_lon="37.91465 S 49.28191 E"
                     /collection_date="2024-05"
WGS         JBSXOK010000001-JBSXOK010000084
WGS_SCAFLD  NZ_JBSXOK010000001-NZ_JBSXOK010000084
//
LOCUS       NZ_JASATM010000000   6593453 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Achromobacter kerstersii strain OTU736, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JASATM000000000
VERSION     NZ_JASATM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN33870867
            Assembly: GCF_038440295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Achromobacter kerstersii
  ORGANISM  Achromobacter kerstersii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (bases 1 to 6593453)
  AUTHORS   Li,Z.
  TITLE     Machine learning predicts microbial metabolic traits from genomes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6593453)
  AUTHORS   Li,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2023) Department of Ecology and Evolution, The
            University of Chicago, 1101 East 57th Street, Chicago, IL 60637,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JASATM000000000.1.
            The Achromobacter kerstersii whole genome shotgun (WGS) project has
            the project accession NZ_JASATM000000000.  This version of the
            project (01) has the accession number NZ_JASATM010000000, and
            consists of sequences JASATM010000001-JASATM010000115.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 29-APR-2022
            Assembly Method        :: Unicycler v. 0.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 314x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038440295.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:57:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,916
            CDSs (total)                      :: 5,853
            Genes (coding)                    :: 5,819
            CDSs (with protein)               :: 5,819
            Genes (RNA)                       :: 63
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 11 of 34
            Pseudo Genes (incomplete)         :: 26 of 34
            Pseudo Genes (internal stop)      :: 3 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6593453
                     /organism="Achromobacter kerstersii"
                     /mol_type="genomic DNA"
                     /strain="OTU736"
                     /isolation_source="soil"
                     /db_xref="taxon:1353890"
                     /geo_loc_name="USA: Meadowbrook Park, Urbana, IL"
                     /collection_date="2018-10-22"
                     /collected_by="Kaumudi H. Prabhakara"
WGS         JASATM010000001-JASATM010000115
WGS_SCAFLD  NZ_JASATM010000001-NZ_JASATM010000115
//
LOCUS       NZ_JAAKSI010000000   4481579 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas veronii strain 602240, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAAKSI000000000
VERSION     NZ_JAAKSI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14146755
            Assembly: GCF_049173835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas veronii (Aeromonas ichthiosmia)
  ORGANISM  Aeromonas veronii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4481579)
  AUTHORS   Hazen,T.H., Michalski,J.M., Tennant,S. and Rasko,D.A.
  TITLE     Genome sequencing of Aeromonas species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4481579)
  AUTHORS   Hazen,T.H., Michalski,J.M., Tennant,S. and Rasko,D.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2020) Institute for Genome Sciences, University
            of Maryland, School of Medicine, 670 W. Baltimore St., Baltimore,
            MD 21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAKSI000000000.1.
            The Aeromonas veronii whole genome shotgun (WGS) project has the
            project accession NZ_JAAKSI000000000.  This version of the project
            (01) has the accession number NZ_JAAKSI010000000, and consists of
            sequences JAAKSI010000001-JAAKSI010000116.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 266.448592337656x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049173835.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:57:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,182
            CDSs (total)                      :: 4,099
            Genes (coding)                    :: 4,061
            CDSs (with protein)               :: 4,061
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 73
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 38
            CDSs (without protein)            :: 38
            Pseudo Genes (ambiguous residues) :: 0 of 38
            Pseudo Genes (frameshifted)       :: 8 of 38
            Pseudo Genes (incomplete)         :: 25 of 38
            Pseudo Genes (internal stop)      :: 5 of 38
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4481579
                     /organism="Aeromonas veronii"
                     /mol_type="genomic DNA"
                     /strain="602240"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:654"
                     /geo_loc_name="Bangladesh"
                     /lat_lon="23.6850 N 90.3563 E"
                     /collected_by="University of Maryland, School of Medicine,
                     Center for Vaccine Development"
WGS         JAAKSI010000001-JAAKSI010000116
WGS_SCAFLD  NZ_JAAKSI010000001-NZ_JAAKSI010000116
//
LOCUS       NZ_JAAKKH010000000   4807319 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas dhakensis strain 700812, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAAKKH000000000
VERSION     NZ_JAAKKH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14146964
            Assembly: GCF_049169275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4807319)
  AUTHORS   Hazen,T.H., Michalski,J.M., Tennant,S. and Rasko,D.A.
  TITLE     Genome sequencing of Aeromonas species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4807319)
  AUTHORS   Hazen,T.H., Michalski,J.M., Tennant,S. and Rasko,D.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2020) Institute for Genome Sciences, University
            of Maryland, School of Medicine, 670 W. Baltimore St., Baltimore,
            MD 21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAKKH000000000.1.
            The Aeromonas dhakensis whole genome shotgun (WGS) project has the
            project accession NZ_JAAKKH000000000.  This version of the project
            (01) has the accession number NZ_JAAKKH010000000, and consists of
            sequences JAAKKH010000001-JAAKKH010000284.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 236.6157789820064x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049169275.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:59:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,621
            CDSs (total)                      :: 4,535
            Genes (coding)                    :: 4,456
            CDSs (with protein)               :: 4,456
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 8 of 79
            Pseudo Genes (incomplete)         :: 69 of 79
            Pseudo Genes (internal stop)      :: 6 of 79
            Pseudo Genes (multiple problems)  :: 3 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4807319
                     /organism="Aeromonas dhakensis"
                     /mol_type="genomic DNA"
                     /strain="700812"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:196024"
                     /geo_loc_name="Pakistan"
                     /lat_lon="30.3753 N 69.3451 E"
                     /collected_by="University of Maryland, School of Medicine,
                     Center for Vaccine Development"
WGS         JAAKKH010000001-JAAKKH010000284
WGS_SCAFLD  NZ_JAAKKH010000001-NZ_JAAKKH010000284
//
LOCUS       NZ_JAAKLJ010000000   4511790 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas veronii strain 700201, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAAKLJ000000000
VERSION     NZ_JAAKLJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14146936
            Assembly: GCF_049169815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas veronii (Aeromonas ichthiosmia)
  ORGANISM  Aeromonas veronii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4511790)
  AUTHORS   Hazen,T.H., Michalski,J.M., Tennant,S. and Rasko,D.A.
  TITLE     Genome sequencing of Aeromonas species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4511790)
  AUTHORS   Hazen,T.H., Michalski,J.M., Tennant,S. and Rasko,D.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2020) Institute for Genome Sciences, University
            of Maryland, School of Medicine, 670 W. Baltimore St., Baltimore,
            MD 21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAKLJ000000000.1.
            The Aeromonas veronii whole genome shotgun (WGS) project has the
            project accession NZ_JAAKLJ000000000.  This version of the project
            (01) has the accession number NZ_JAAKLJ010000000, and consists of
            sequences JAAKLJ010000001-JAAKLJ010000074.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 242.144455304879x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049169815.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:58:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,127
            CDSs (total)                      :: 4,046
            Genes (coding)                    :: 4,005
            CDSs (with protein)               :: 4,005
            Genes (RNA)                       :: 81
            rRNAs                             :: 2, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 1, 3 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 41
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 11 of 42
            Pseudo Genes (incomplete)         :: 24 of 42
            Pseudo Genes (internal stop)      :: 10 of 42
            Pseudo Genes (multiple problems)  :: 4 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4511790
                     /organism="Aeromonas veronii"
                     /mol_type="genomic DNA"
                     /strain="700201"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:654"
                     /geo_loc_name="Pakistan"
                     /lat_lon="30.3753 N 69.3451 E"
                     /collected_by="University of Maryland, School of Medicine,
                     Center for Vaccine Development"
WGS         JAAKLJ010000001-JAAKLJ010000074
WGS_SCAFLD  NZ_JAAKLJ010000001-NZ_JAAKLJ010000074
//
LOCUS       NZ_JAAKKN010000000   4649244 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas dhakensis strain 700698, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAAKKN000000000
VERSION     NZ_JAAKKN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14146958
            Assembly: GCF_049169355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4649244)
  AUTHORS   Hazen,T.H., Michalski,J.M., Tennant,S. and Rasko,D.A.
  TITLE     Genome sequencing of Aeromonas species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4649244)
  AUTHORS   Hazen,T.H., Michalski,J.M., Tennant,S. and Rasko,D.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2020) Institute for Genome Sciences, University
            of Maryland, School of Medicine, 670 W. Baltimore St., Baltimore,
            MD 21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAKKN000000000.1.
            The Aeromonas dhakensis whole genome shotgun (WGS) project has the
            project accession NZ_JAAKKN000000000.  This version of the project
            (01) has the accession number NZ_JAAKKN010000000, and consists of
            sequences JAAKKN010000001-JAAKKN010000145.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 315.10899621529865x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049169355.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:56:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,322
            CDSs (total)                      :: 4,243
            Genes (coding)                    :: 4,184
            CDSs (with protein)               :: 4,184
            Genes (RNA)                       :: 79
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 14 of 59
            Pseudo Genes (incomplete)         :: 49 of 59
            Pseudo Genes (internal stop)      :: 6 of 59
            Pseudo Genes (multiple problems)  :: 9 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4649244
                     /organism="Aeromonas dhakensis"
                     /mol_type="genomic DNA"
                     /strain="700698"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:196024"
                     /geo_loc_name="Pakistan"
                     /lat_lon="30.3753 N 69.3451 E"
                     /collected_by="University of Maryland, School of Medicine,
                     Center for Vaccine Development"
WGS         JAAKKN010000001-JAAKKN010000145
WGS_SCAFLD  NZ_JAAKKN010000001-NZ_JAAKKN010000145
//
LOCUS       NZ_JAAKUG010000000   4516701 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas veronii strain 600799, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAAKUG000000000
VERSION     NZ_JAAKUG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14146705
            Assembly: GCF_049175015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas veronii (Aeromonas ichthiosmia)
  ORGANISM  Aeromonas veronii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4516701)
  AUTHORS   Hazen,T.H., Michalski,J.M., Tennant,S. and Rasko,D.A.
  TITLE     Genome sequencing of Aeromonas species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4516701)
  AUTHORS   Hazen,T.H., Michalski,J.M., Tennant,S. and Rasko,D.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2020) Institute for Genome Sciences, University
            of Maryland, School of Medicine, 670 W. Baltimore St., Baltimore,
            MD 21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAKUG000000000.1.
            The Aeromonas veronii whole genome shotgun (WGS) project has the
            project accession NZ_JAAKUG000000000.  This version of the project
            (01) has the accession number NZ_JAAKUG010000000, and consists of
            sequences JAAKUG010000001-JAAKUG010000033.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 252.8083851465926x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049175015.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:03:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,126
            CDSs (total)                      :: 4,049
            Genes (coding)                    :: 4,010
            CDSs (with protein)               :: 4,010
            Genes (RNA)                       :: 77
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 22 of 39
            Pseudo Genes (incomplete)         :: 25 of 39
            Pseudo Genes (internal stop)      :: 9 of 39
            Pseudo Genes (multiple problems)  :: 14 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4516701
                     /organism="Aeromonas veronii"
                     /mol_type="genomic DNA"
                     /strain="600799"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:654"
                     /geo_loc_name="Bangladesh"
                     /lat_lon="23.6850 N 90.3563 E"
                     /collected_by="University of Maryland, School of Medicine,
                     Center for Vaccine Development"
WGS         JAAKUG010000001-JAAKUG010000033
WGS_SCAFLD  NZ_JAAKUG010000001-NZ_JAAKUG010000033
//
LOCUS       NZ_CDBI01000000      4745919 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas popoffii strain CIP 105493, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CDBI00000000
VERSION     NZ_CDBI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2752414
            Assembly: GCF_000820025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas popoffii
  ORGANISM  Aeromonas popoffii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1
  AUTHORS   Colston,Sophie., Beka,Lidia., Wegrzyn,Jill., Nelson,C.Michael. and
            Graf,Joerg.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-SEP-2014) UCONNMISEQ, Dept. of Molecular and Cell
            Biology, Joerg Graf Lab, 91 N. Eagleville Rd., Storrs, CT, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDBI00000000.1.
            The Aeromonas popoffii whole genome shotgun (WGS) project has the
            project accession NZ_CDBI00000000.  This version of the project
            (01) has the accession number NZ_CDBI01000000, and consists of
            sequences CDBI01000001-CDBI01000105.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000820025.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:42:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,526
            CDSs (total)                      :: 4,426
            Genes (coding)                    :: 4,262
            CDSs (with protein)               :: 4,262
            Genes (RNA)                       :: 100
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 164
            CDSs (without protein)            :: 164
            Pseudo Genes (ambiguous residues) :: 0 of 164
            Pseudo Genes (frameshifted)       :: 66 of 164
            Pseudo Genes (incomplete)         :: 140 of 164
            Pseudo Genes (internal stop)      :: 25 of 164
            Pseudo Genes (multiple problems)  :: 56 of 164
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4745919
                     /organism="Aeromonas popoffii"
                     /mol_type="genomic DNA"
                     /strain="CIP 105493"
                     /type_material="type strain of Aeromonas popoffii"
                     /db_xref="taxon:70856"
WGS         CDBI01000001-CDBI01000105
WGS_SCAFLD  NZ_CDBI01000001-NZ_CDBI01000105
//
LOCUS       NZ_CDDA01000000      4686654 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas bestiarum strain CECT 4227, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CDDA00000000
VERSION     NZ_CDDA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2752425
            Assembly: GCF_000819745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas bestiarum
  ORGANISM  Aeromonas bestiarum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1
  AUTHORS   Colston,Sophie., Beka,Lidia., Wegrzyn,Jill., Nelson,C.Michael. and
            Graf,Joerg.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-SEP-2014) UCONNMISEQ, Dept. of Molecular and Cell
            Biology, Joerg Graf Lab, 91 N. Eagleville Rd., Storrs, CT, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDDA00000000.1.
            The Aeromonas bestiarum whole genome shotgun (WGS) project has the
            project accession NZ_CDDA00000000.  This version of the project
            (01) has the accession number NZ_CDDA01000000, and consists of
            sequences CDDA01000001-CDDA01000041.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000819745.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:43:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,290
            CDSs (total)                      :: 4,197
            Genes (coding)                    :: 4,157
            CDSs (with protein)               :: 4,157
            Genes (RNA)                       :: 93
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 40
            CDSs (without protein)            :: 40
            Pseudo Genes (ambiguous residues) :: 0 of 40
            Pseudo Genes (frameshifted)       :: 14 of 40
            Pseudo Genes (incomplete)         :: 31 of 40
            Pseudo Genes (internal stop)      :: 6 of 40
            Pseudo Genes (multiple problems)  :: 8 of 40
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4686654
                     /organism="Aeromonas bestiarum"
                     /mol_type="genomic DNA"
                     /strain="CECT 4227"
                     /type_material="type strain of Aeromonas bestiarum"
                     /db_xref="taxon:105751"
WGS         CDDA01000001-CDDA01000041
WGS_SCAFLD  NZ_CDDA01000001-NZ_CDDA01000041
//
LOCUS       NZ_CDTHHT010000000   4240295 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Alteromonas australica isolate MarMAG_091308, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDTHHT000000000
VERSION     NZ_CDTHHT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120697480
            Assembly: GCF_977331275.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Alteromonas australica (marine metagenome)
  ORGANISM  Alteromonas australica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Alteromonadaceae; Alteromonas/Salinimonas group;
            Alteromonas.
REFERENCE   1  (bases 1 to 4240295)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDTHHT000000000.1.
            The Alteromonas australica whole genome shotgun (WGS) project has
            the project accession NZ_CDTHHT000000000.  This version of the
            project (01) has the accession number NZ_CDTHHT010000000, and
            consists of sequences CDTHHT010000001-CDTHHT010000074.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977331275.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:19:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,765
            CDSs (total)                      :: 3,722
            Genes (coding)                    :: 3,695
            CDSs (with protein)               :: 3,695
            Genes (RNA)                       :: 43
            tRNAs                             :: 39
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 3 of 27
            Pseudo Genes (incomplete)         :: 21 of 27
            Pseudo Genes (internal stop)      :: 7 of 27
            Pseudo Genes (multiple problems)  :: 3 of 27
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4240295
                     /organism="Alteromonas australica"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_091308"
                     /db_xref="taxon:589873"
                     /environmental_sample
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDTHHT010000001-CDTHHT010000074
WGS_SCAFLD  NZ_CDTHHT010000001-NZ_CDTHHT010000074
//
LOCUS       NZ_CDBV01000000      4473473 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas jandaei strain CECT 4228, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CDBV00000000
VERSION     NZ_CDBV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2752417
            Assembly: GCF_000819955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas jandaei
  ORGANISM  Aeromonas jandaei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1
  AUTHORS   Colston,Sophie., Beka,Lidia., Wegrzyn,Jill., Nelson,C.Michael. and
            Graf,Joerg.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-SEP-2014) UCONNMISEQ, Dept. of Molecular and Cell
            Biology, Joerg Graf Lab, 91 N. Eagleville Rd., Storrs, CT, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDBV00000000.1.
            The Aeromonas jandaei whole genome shotgun (WGS) project has the
            project accession NZ_CDBV00000000.  This version of the project
            (01) has the accession number NZ_CDBV01000000, and consists of
            sequences CDBV01000001-CDBV01000058.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000819955.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:45:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,274
            CDSs (total)                      :: 4,185
            Genes (coding)                    :: 4,129
            CDSs (with protein)               :: 4,129
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 82
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 13 of 56
            Pseudo Genes (incomplete)         :: 44 of 56
            Pseudo Genes (internal stop)      :: 6 of 56
            Pseudo Genes (multiple problems)  :: 5 of 56
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4473473
                     /organism="Aeromonas jandaei"
                     /mol_type="genomic DNA"
                     /strain="CECT 4228"
                     /type_material="type strain of Aeromonas jandaei"
                     /db_xref="taxon:650"
WGS         CDBV01000001-CDBV01000058
WGS_SCAFLD  NZ_CDBV01000001-NZ_CDBV01000058
//
LOCUS       NZ_CDTDWG010000000   3005743 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Alloalcanivorax venustensis isolate MarMAG_001715, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CDTDWG000000000
VERSION     NZ_CDTDWG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120697614
            Assembly: GCF_977307985.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Alloalcanivorax venustensis (marine metagenome)
  ORGANISM  Alloalcanivorax venustensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Alcanivoracaceae; Alloalcanivorax.
REFERENCE   1  (bases 1 to 3005743)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDTDWG000000000.1.
            The Alloalcanivorax venustensis whole genome shotgun (WGS) project
            has the project accession NZ_CDTDWG000000000.  This version of the
            project (01) has the accession number NZ_CDTDWG010000000, and
            consists of sequences CDTDWG010000001-CDTDWG010000208.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977307985.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:27:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,997
            CDSs (total)                      :: 2,960
            Genes (coding)                    :: 2,916
            CDSs (with protein)               :: 2,916
            Genes (RNA)                       :: 37
            tRNAs                             :: 33
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 3 of 44
            Pseudo Genes (incomplete)         :: 40 of 44
            Pseudo Genes (internal stop)      :: 3 of 44
            Pseudo Genes (multiple problems)  :: 2 of 44
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3005743
                     /organism="Alloalcanivorax venustensis"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_001715"
                     /db_xref="taxon:172371"
                     /environmental_sample
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDTDWG010000001-CDTDWG010000208
WGS_SCAFLD  NZ_CDTDWG010000001-NZ_CDTDWG010000208
//
LOCUS       NZ_CDBO01000000      3899151 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas fluvialis strain LMG 24681, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CDBO00000000
VERSION     NZ_CDBO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2752418
            Assembly: GCF_000819885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas fluvialis
  ORGANISM  Aeromonas fluvialis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1
  AUTHORS   Colston,Sophie., Beka,Lidia., Wegrzyn,Jill., Nelson,C.Michael. and
            Graf,Joerg.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-SEP-2014) UCONNMISEQ, Dept. of Molecular and Cell
            Biology, Joerg Graf Lab, 91 N. Eagleville Rd., Storrs, CT, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDBO00000000.1.
            The Aeromonas fluvialis whole genome shotgun (WGS) project has the
            project accession NZ_CDBO00000000.  This version of the project
            (01) has the accession number NZ_CDBO01000000, and consists of
            sequences CDBO01000001-CDBO01000076.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000819885.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:52:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,728
            CDSs (total)                      :: 3,634
            Genes (coding)                    :: 3,498
            CDSs (with protein)               :: 3,498
            Genes (RNA)                       :: 94
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 136
            CDSs (without protein)            :: 136
            Pseudo Genes (ambiguous residues) :: 0 of 136
            Pseudo Genes (frameshifted)       :: 52 of 136
            Pseudo Genes (incomplete)         :: 106 of 136
            Pseudo Genes (internal stop)      :: 30 of 136
            Pseudo Genes (multiple problems)  :: 42 of 136
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3899151
                     /organism="Aeromonas fluvialis"
                     /mol_type="genomic DNA"
                     /strain="LMG 24681"
                     /type_material="type strain of Aeromonas fluvialis"
                     /db_xref="taxon:591962"
WGS         CDBO01000001-CDBO01000076
WGS_SCAFLD  NZ_CDBO01000001-NZ_CDBO01000076
//
LOCUS       NZ_FMYL01000000      2690205 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Acinetobacter boissieri strain ANC 4422, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FMYL00000000
VERSION     NZ_FMYL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05421733
            Assembly: GCF_900096955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter boissieri
  ORGANISM  Acinetobacter boissieri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-SEP-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FMYL00000000.1.
            The Acinetobacter boissieri whole genome shotgun (WGS) project has
            the project accession NZ_FMYL00000000.  This version of the project
            (01) has the accession number NZ_FMYL01000000, and consists of
            sequences FMYL01000001-FMYL01000029.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900096955.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:54:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,572
            CDSs (total)                      :: 2,507
            Genes (coding)                    :: 2,460
            CDSs (with protein)               :: 2,460
            Genes (RNA)                       :: 65
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 47
            CDSs (without protein)            :: 47
            Pseudo Genes (ambiguous residues) :: 0 of 47
            Pseudo Genes (frameshifted)       :: 15 of 47
            Pseudo Genes (incomplete)         :: 38 of 47
            Pseudo Genes (internal stop)      :: 9 of 47
            Pseudo Genes (multiple problems)  :: 12 of 47
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2690205
                     /organism="Acinetobacter boissieri"
                     /mol_type="genomic DNA"
                     /strain="ANC 4422"
                     /db_xref="taxon:1219383"
WGS         FMYL01000001-FMYL01000029
WGS_SCAFLD  NZ_FMYL01000001-NZ_FMYL01000029
//
LOCUS       NZ_FMYK01000000      2994779 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Acinetobacter marinus strain ANC 3699, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FMYK00000000
VERSION     NZ_FMYK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05421749
            Assembly: GCF_900096915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter marinus
  ORGANISM  Acinetobacter marinus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-SEP-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FMYK00000000.1.
            The Acinetobacter marinus whole genome shotgun (WGS) project has
            the project accession NZ_FMYK00000000.  This version of the project
            (01) has the accession number NZ_FMYK01000000, and consists of
            sequences FMYK01000001-FMYK01000022.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900096915.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:55:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,793
            CDSs (total)                      :: 2,727
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 66
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 11 of 50
            Pseudo Genes (incomplete)         :: 33 of 50
            Pseudo Genes (internal stop)      :: 11 of 50
            Pseudo Genes (multiple problems)  :: 4 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2994779
                     /organism="Acinetobacter marinus"
                     /mol_type="genomic DNA"
                     /strain="ANC 3699"
                     /db_xref="taxon:281375"
WGS         FMYK01000001-FMYK01000022
WGS_SCAFLD  NZ_FMYK01000001-NZ_FMYK01000022
//
LOCUS       NZ_FNPK01000000      3714024 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Acinetobacter kyonggiensis strain ANC 5109, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNPK00000000
VERSION     NZ_FNPK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05421643
            Assembly: GCF_900107285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter kyonggiensis
  ORGANISM  Acinetobacter kyonggiensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNPK00000000.1.
            The Acinetobacter kyonggiensis whole genome shotgun (WGS) project
            has the project accession NZ_FNPK00000000.  This version of the
            project (01) has the accession number NZ_FNPK01000000, and consists
            of sequences FNPK01000001-FNPK01000073.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900107285.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:59:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,598
            CDSs (total)                      :: 3,515
            Genes (coding)                    :: 3,394
            CDSs (with protein)               :: 3,394
            Genes (RNA)                       :: 83
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 72
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 121
            Pseudo Genes (ambiguous residues) :: 0 of 121
            Pseudo Genes (frameshifted)       :: 42 of 121
            Pseudo Genes (incomplete)         :: 98 of 121
            Pseudo Genes (internal stop)      :: 22 of 121
            Pseudo Genes (multiple problems)  :: 32 of 121
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3714024
                     /organism="Acinetobacter kyonggiensis"
                     /mol_type="genomic DNA"
                     /strain="ANC 5109"
                     /db_xref="taxon:595670"
WGS         FNPK01000001-FNPK01000073
WGS_SCAFLD  NZ_FNPK01000001-NZ_FNPK01000073
//
LOCUS       NZ_FMVW01000000      3963421 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Afifella marina DSM 2698, whole genome shotgun sequencing project.
ACCESSION   NZ_FMVW00000000
VERSION     NZ_FMVW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03080610
            Assembly: GCF_900102695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Afifella marina DSM 2698
  ORGANISM  Afifella marina DSM 2698
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Afifellaceae; Afifella.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FMVW00000000.1.
            The Afifella marina DSM 2698 whole genome shotgun (WGS) project has
            the project accession NZ_FMVW00000000.  This version of the project
            (01) has the accession number NZ_FMVW01000000, and consists of
            sequences FMVW01000001-FMVW01000024.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900102695.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:04:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,725
            CDSs (total)                      :: 3,673
            Genes (coding)                    :: 3,650
            CDSs (with protein)               :: 3,650
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 23
            CDSs (without protein)            :: 23
            Pseudo Genes (ambiguous residues) :: 0 of 23
            Pseudo Genes (frameshifted)       :: 4 of 23
            Pseudo Genes (incomplete)         :: 19 of 23
            Pseudo Genes (internal stop)      :: 1 of 23
            Pseudo Genes (multiple problems)  :: 1 of 23
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3963421
                     /organism="Afifella marina DSM 2698"
                     /mol_type="genomic DNA"
                     /strain="DSM 2698"
                     /culture_collection="DSM:2698"
                     /type_material="type strain of Rhodopseudomonas marina"
                     /db_xref="taxon:1120955"
                     /geo_loc_name="Germany:North Sea, Germany"
WGS         FMVW01000001-FMVW01000024
WGS_SCAFLD  NZ_FMVW01000001-NZ_FMVW01000024
//
LOCUS       NZ_CDDH01000000      4110035 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas australiensis strain CECT 8023, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CDDH00000000
VERSION     NZ_CDDH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2752426
            Assembly: GCF_000819725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas australiensis
  ORGANISM  Aeromonas australiensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1
  AUTHORS   Colston,Sophie., Beka,Lidia., Wegrzyn,Jill., Nelson,C.Michael. and
            Graf,Joerg.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-SEP-2014) UCONNMISEQ, Dept. of Molecular and Cell
            Biology, Joerg Graf Lab, 91 N. Eagleville Rd., Storrs, CT, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDDH00000000.1.
            The Aeromonas australiensis whole genome shotgun (WGS) project has
            the project accession NZ_CDDH00000000.  This version of the project
            (01) has the accession number NZ_CDDH01000000, and consists of
            sequences CDDH01000001-CDDH01000113.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000819725.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:11:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,814
            CDSs (total)                      :: 3,723
            Genes (coding)                    :: 3,656
            CDSs (with protein)               :: 3,656
            Genes (RNA)                       :: 91
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 81
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 22 of 67
            Pseudo Genes (incomplete)         :: 50 of 67
            Pseudo Genes (internal stop)      :: 9 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4110035
                     /organism="Aeromonas australiensis"
                     /mol_type="genomic DNA"
                     /strain="CECT 8023"
                     /type_material="type strain of Aeromonas australiensis"
                     /db_xref="taxon:1114880"
WGS         CDDH01000001-CDDH01000113
WGS_SCAFLD  NZ_CDDH01000001-NZ_CDDH01000113
//
LOCUS       NZ_FNQJ01000000      4130223 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Acidovorax soli strain DSM 25157, whole genome shotgun sequencing
            project.
ACCESSION   NZ_FNQJ00000000
VERSION     NZ_FNQJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05421875
            Assembly: GCF_900107605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acidovorax soli
  ORGANISM  Acidovorax soli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Acidovorax.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNQJ00000000.1.
            The Acidovorax soli whole genome shotgun (WGS) project has the
            project accession NZ_FNQJ00000000.  This version of the project
            (01) has the accession number NZ_FNQJ01000000, and consists of
            sequences FNQJ01000001-FNQJ01000090.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900107605.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:13:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,925
            CDSs (total)                      :: 3,869
            Genes (coding)                    :: 3,796
            CDSs (with protein)               :: 3,796
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 73
            CDSs (without protein)            :: 73
            Pseudo Genes (ambiguous residues) :: 0 of 73
            Pseudo Genes (frameshifted)       :: 16 of 73
            Pseudo Genes (incomplete)         :: 68 of 73
            Pseudo Genes (internal stop)      :: 4 of 73
            Pseudo Genes (multiple problems)  :: 13 of 73
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4130223
                     /organism="Acidovorax soli"
                     /mol_type="genomic DNA"
                     /strain="DSM 25157"
                     /type_material="type strain of Acidovorax soli"
                     /db_xref="taxon:592050"
WGS         FNQJ01000001-FNQJ01000090
WGS_SCAFLD  NZ_FNQJ01000001-NZ_FNQJ01000090
//
LOCUS       NZ_NKWT01000000      4977910 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas dhakensis strain BVH43, whole genome shotgun sequencing
            project.
ACCESSION   NZ_NKWT00000000
VERSION     NZ_NKWT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07312758
            Assembly: GCF_006246155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4977910)
  AUTHORS   Rangel,L.T., Marden,J., Colston,S., Setubal,J.C., Graf,J. and
            Gogarten,J.P.
  TITLE     Identification and characterization of putative Aeromonas spp. T3SS
            effectors
  JOURNAL   PLoS One 14 (6), e0214035 (2019)
   PUBMED   31163020
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4977910)
  AUTHORS   Colston,S.M. and Graf,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUL-2017) Molecular and Cell Biology, University of
            Connecticut, 91 N. Eagleville Rd, Storrs, CT 06269, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NKWT00000000.1.
            The Aeromonas dhakensis whole genome shotgun (WGS) project has the
            project accession NZ_NKWT00000000.  This version of the project
            (01) has the accession number NZ_NKWT01000000, and consists of
            sequences NKWT01000001-NKWT01000057.
            Bacteria available from Graf lab, University of Connecticut.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. CLC Genomics workbench 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 83x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006246155.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:40:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,721
            CDSs (total)                      :: 4,615
            Genes (coding)                    :: 4,567
            CDSs (with protein)               :: 4,567
            Genes (RNA)                       :: 106
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 92
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 12 of 48
            Pseudo Genes (incomplete)         :: 32 of 48
            Pseudo Genes (internal stop)      :: 8 of 48
            Pseudo Genes (multiple problems)  :: 4 of 48
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4977910
                     /organism="Aeromonas dhakensis"
                     /mol_type="genomic DNA"
                     /strain="BVH43"
                     /isolation_source="wound"
                     /host="Homo sapiens"
                     /db_xref="taxon:196024"
WGS         NKWT01000001-NKWT01000057
WGS_SCAFLD  NZ_NKWT01000001-NZ_NKWT01000057
//
LOCUS       NZ_NKXC01000000      4590976 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas veronii strain AMC 25, whole genome shotgun sequencing
            project.
ACCESSION   NZ_NKXC00000000
VERSION     NZ_NKXC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07312748
            Assembly: GCF_006246485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas veronii (Aeromonas ichthiosmia)
  ORGANISM  Aeromonas veronii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4590976)
  AUTHORS   Rangel,L.T., Marden,J., Colston,S., Setubal,J.C., Graf,J. and
            Gogarten,J.P.
  TITLE     Identification and characterization of putative Aeromonas spp. T3SS
            effectors
  JOURNAL   PLoS One 14 (6), e0214035 (2019)
   PUBMED   31163020
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4590976)
  AUTHORS   Colston,S.M. and Graf,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUL-2017) Molecular and Cell Biology, University of
            Connecticut, 91 N. Eagleville Rd, Storrs, CT 06269, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NKXC00000000.1.
            The Aeromonas veronii whole genome shotgun (WGS) project has the
            project accession NZ_NKXC00000000.  This version of the project
            (01) has the accession number NZ_NKXC01000000, and consists of
            sequences NKXC01000001-NKXC01000050.
            Bacteria available from Graf lab, University of Connecticut.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. CLC Genomics workbench 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 64x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006246485.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:44:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,316
            CDSs (total)                      :: 4,209
            Genes (coding)                    :: 4,169
            CDSs (with protein)               :: 4,169
            Genes (RNA)                       :: 107
            rRNAs                             :: 3, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 95
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 40
            CDSs (without protein)            :: 40
            Pseudo Genes (ambiguous residues) :: 0 of 40
            Pseudo Genes (frameshifted)       :: 14 of 40
            Pseudo Genes (incomplete)         :: 30 of 40
            Pseudo Genes (internal stop)      :: 3 of 40
            Pseudo Genes (multiple problems)  :: 7 of 40
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4590976
                     /organism="Aeromonas veronii"
                     /mol_type="genomic DNA"
                     /strain="AMC 25"
                     /host="duck"
                     /db_xref="taxon:654"
WGS         NKXC01000001-NKXC01000050
WGS_SCAFLD  NZ_NKXC01000001-NZ_NKXC01000050
//
LOCUS       NZ_FNJR01000000      5032964 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Actinopolyspora xinjiangensis strain DSM 46732, whole genome
            shotgun sequencing project.
ACCESSION   NZ_FNJR00000000
VERSION     NZ_FNJR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04487905
            Assembly: GCF_900104475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Actinopolyspora xinjiangensis
  ORGANISM  Actinopolyspora xinjiangensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinopolysporales; Actinopolysporaceae; Actinopolyspora.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNJR00000000.1.
            The Actinopolyspora xinjiangensis whole genome shotgun (WGS)
            project has the project accession NZ_FNJR00000000.  This version of
            the project (01) has the accession number NZ_FNJR01000000, and
            consists of sequences FNJR01000001-FNJR01000034.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900104475.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:04:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,620
            CDSs (total)                      :: 4,555
            Genes (coding)                    :: 4,472
            CDSs (with protein)               :: 4,472
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 83
            CDSs (without protein)            :: 83
            Pseudo Genes (ambiguous residues) :: 0 of 83
            Pseudo Genes (frameshifted)       :: 27 of 83
            Pseudo Genes (incomplete)         :: 59 of 83
            Pseudo Genes (internal stop)      :: 7 of 83
            Pseudo Genes (multiple problems)  :: 10 of 83
            CRISPR Arrays                     :: 6
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5032964
                     /organism="Actinopolyspora xinjiangensis"
                     /mol_type="genomic DNA"
                     /strain="DSM 46732"
                     /type_material="type strain of Actinopolyspora
                     xinjiangensis"
                     /db_xref="taxon:405564"
WGS         FNJR01000001-FNJR01000034
WGS_SCAFLD  NZ_FNJR01000001-NZ_FNJR01000034
//
LOCUS       NZ_JAGFEC010000000   4878352 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas dhakensis strain 16006, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAGFEC000000000
VERSION     NZ_JAGFEC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17860440
            Assembly: GCF_017582425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4878352)
  AUTHORS   Tickler,I.A., Shettima,S.A., Dela Cruz,C.M., Le,V.M., Dewell,S.,
            Sumner,J. and Tenover,F.C.
  TITLE     Characterization of carbapenem-resistant Gram-negative bacterial
            isolates from Nigeria by whole genome sequencing
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4878352)
  AUTHORS   Tickler,I.A., Shettima,S.A., Dela Cruz,C.M., Le,V.M., Dewell,S.,
            Sumner,J. and Tenover,F.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-MAR-2021) Healthcare Associated Infections, Cepheid,
            904 Caribbean Drive, Sunnyvale, CA 94089, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGFEC000000000.1.
            The Aeromonas dhakensis whole genome shotgun (WGS) project has the
            project accession NZ_JAGFEC000000000.  This version of the project
            (01) has the accession number NZ_JAGFEC010000000, and consists of
            sequences JAGFEC010000001-JAGFEC010000160.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: A5-miseq v. 2016-08-01T00:00:00
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 73x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017582425.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:19:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,646
            CDSs (total)                      :: 4,479
            Genes (coding)                    :: 4,392
            CDSs (with protein)               :: 4,392
            Genes (RNA)                       :: 167
            rRNAs                             :: 12, 14, 16 (5S, 16S, 23S)
            complete rRNAs                    :: 12, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 13, 15 (16S, 23S)
            tRNAs                             :: 120
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 87
            CDSs (without protein)            :: 87
            Pseudo Genes (ambiguous residues) :: 0 of 87
            Pseudo Genes (frameshifted)       :: 31 of 87
            Pseudo Genes (incomplete)         :: 58 of 87
            Pseudo Genes (internal stop)      :: 7 of 87
            Pseudo Genes (multiple problems)  :: 8 of 87
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4878352
                     /organism="Aeromonas dhakensis"
                     /mol_type="genomic DNA"
                     /strain="16006"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:196024"
                     /geo_loc_name="Nigeria"
                     /collection_date="2018"
WGS         JAGFEC010000001-JAGFEC010000160
WGS_SCAFLD  NZ_JAGFEC010000001-NZ_JAGFEC010000160
//
LOCUS       NZ_JARFYT010000000   4030105 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Acinetobacter nosocomialis strain HNAN1832, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JARFYT000000000
VERSION     NZ_JARFYT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32638098
            Assembly: GCF_029100515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter nosocomialis
  ORGANISM  Acinetobacter nosocomialis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 4030105)
  AUTHORS   Li,Y.
  TITLE     Acinetobacter nosocomialis strains HNAN1832 WGS
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4030105)
  AUTHORS   Li,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-FEB-2023) Lab Medicine of Xiangya Hospital, Central
            South University, Xiangya Road, Changsha 410008, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARFYT000000000.1.
            The Acinetobacter nosocomialis whole genome shotgun (WGS) project
            has the project accession NZ_JARFYT000000000.  This version of the
            project (01) has the accession number NZ_JARFYT010000000, and
            consists of sequences JARFYT010000001-JARFYT010000081.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12.0x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029100515.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:40:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,860
            CDSs (total)                      :: 3,798
            Genes (coding)                    :: 3,684
            CDSs (with protein)               :: 3,684
            Genes (RNA)                       :: 62
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 114
            CDSs (without protein)            :: 114
            Pseudo Genes (ambiguous residues) :: 0 of 114
            Pseudo Genes (frameshifted)       :: 45 of 114
            Pseudo Genes (incomplete)         :: 61 of 114
            Pseudo Genes (internal stop)      :: 30 of 114
            Pseudo Genes (multiple problems)  :: 20 of 114
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4030105
                     /organism="Acinetobacter nosocomialis"
                     /mol_type="genomic DNA"
                     /strain="HNAN1832"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:106654"
                     /geo_loc_name="China: Hunan"
                     /lat_lon="28.12 N 112.59 E"
                     /collection_date="2020"
                     /collected_by="Xiangya Hospital"
WGS         JARFYT010000001-JARFYT010000081
WGS_SCAFLD  NZ_JARFYT010000001-NZ_JARFYT010000081
//
LOCUS       NZ_CAWQBJ010000000   5093106 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas dhakensis isolate ena-yuan-GCF_018682365.1, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CAWQBJ000000000
VERSION     NZ_CAWQBJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA115016575
            Assembly: GCF_963893115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 5093106)
  AUTHORS   Yuan,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2023) NAU, Nanjing 210095, China, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAWQBJ000000000.1.
            The Aeromonas dhakensis whole genome shotgun (WGS) project has the
            project accession NZ_CAWQBJ000000000.  This version of the project
            (01) has the accession number NZ_CAWQBJ010000000, and consists of
            sequences CAWQBJ010000001-CAWQBJ010000051.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_963893115.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:06:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,730
            CDSs (total)                      :: 4,645
            Genes (coding)                    :: 4,614
            CDSs (with protein)               :: 4,614
            Genes (RNA)                       :: 85
            rRNAs                             :: 2, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 10 of 31
            Pseudo Genes (incomplete)         :: 24 of 31
            Pseudo Genes (internal stop)      :: 0 of 31
            Pseudo Genes (multiple problems)  :: 3 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5093106
                     /organism="Aeromonas dhakensis"
                     /mol_type="genomic DNA"
                     /isolate="ena-yuan-GCF_018682365.1"
                     /db_xref="taxon:196024"
WGS         CAWQBJ010000001-CAWQBJ010000051
WGS_SCAFLD  NZ_CAWQBJ010000001-NZ_CAWQBJ010000051
//
LOCUS       NZ_CAWOOF010000000   4598948 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas veronii isolate ena-yuan-GCF_006246235.1, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CAWOOF000000000
VERSION     NZ_CAWOOF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA115017965
            Assembly: GCF_963883195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas veronii (Aeromonas ichthiosmia)
  ORGANISM  Aeromonas veronii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4598948)
  AUTHORS   Yuan,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-DEC-2023) NAU, Nanjing 210095, China, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAWOOF000000000.1.
            The Aeromonas veronii whole genome shotgun (WGS) project has the
            project accession NZ_CAWOOF000000000.  This version of the project
            (01) has the accession number NZ_CAWOOF010000000, and consists of
            sequences CAWOOF010000001-CAWOOF010000042.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_963883195.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:07:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,268
            CDSs (total)                      :: 4,165
            Genes (coding)                    :: 4,125
            CDSs (with protein)               :: 4,125
            Genes (RNA)                       :: 103
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 93
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 40
            CDSs (without protein)            :: 40
            Pseudo Genes (ambiguous residues) :: 0 of 40
            Pseudo Genes (frameshifted)       :: 14 of 40
            Pseudo Genes (incomplete)         :: 23 of 40
            Pseudo Genes (internal stop)      :: 9 of 40
            Pseudo Genes (multiple problems)  :: 4 of 40
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4598948
                     /organism="Aeromonas veronii"
                     /mol_type="genomic DNA"
                     /isolate="ena-yuan-GCF_006246235.1"
                     /db_xref="taxon:654"
WGS         CAWOOF010000001-CAWOOF010000042
WGS_SCAFLD  NZ_CAWOOF010000001-NZ_CAWOOF010000042
//
LOCUS       NZ_CAWQUL010000000   4637233 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas veronii isolate ena-yuan-GCF_021608285.1, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CAWQUL000000000
VERSION     NZ_CAWQUL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA115018734
            Assembly: GCF_963898005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas veronii (Aeromonas ichthiosmia)
  ORGANISM  Aeromonas veronii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4637233)
  AUTHORS   Yuan,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2023) NAU, Nanjing 210095, China, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAWQUL000000000.1.
            The Aeromonas veronii whole genome shotgun (WGS) project has the
            project accession NZ_CAWQUL000000000.  This version of the project
            (01) has the accession number NZ_CAWQUL010000000, and consists of
            sequences CAWQUL010000001-CAWQUL010000048.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_963898005.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:10:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,343
            CDSs (total)                      :: 4,228
            Genes (coding)                    :: 4,190
            CDSs (with protein)               :: 4,190
            Genes (RNA)                       :: 115
            rRNAs                             :: 5, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 3, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 101
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 38
            CDSs (without protein)            :: 38
            Pseudo Genes (ambiguous residues) :: 0 of 38
            Pseudo Genes (frameshifted)       :: 10 of 38
            Pseudo Genes (incomplete)         :: 26 of 38
            Pseudo Genes (internal stop)      :: 5 of 38
            Pseudo Genes (multiple problems)  :: 3 of 38
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4637233
                     /organism="Aeromonas veronii"
                     /mol_type="genomic DNA"
                     /isolate="ena-yuan-GCF_021608285.1"
                     /db_xref="taxon:654"
WGS         CAWQUL010000001-CAWQUL010000048
WGS_SCAFLD  NZ_CAWQUL010000001-NZ_CAWQUL010000048
//
LOCUS       NZ_CAWOOV010000000   4852378 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas dhakensis isolate ena-yuan-GCF_006246145.1, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CAWOOV000000000
VERSION     NZ_CAWOOV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA115016317
            Assembly: GCF_963883225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4852378)
  AUTHORS   Yuan,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-DEC-2023) NAU, Nanjing 210095, China, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAWOOV000000000.1.
            The Aeromonas dhakensis whole genome shotgun (WGS) project has the
            project accession NZ_CAWOOV000000000.  This version of the project
            (01) has the accession number NZ_CAWOOV010000000, and consists of
            sequences CAWOOV010000001-CAWOOV010000082.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_963883225.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:13:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,609
            CDSs (total)                      :: 4,507
            Genes (coding)                    :: 4,436
            CDSs (with protein)               :: 4,436
            Genes (RNA)                       :: 102
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 89
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 17 of 71
            Pseudo Genes (incomplete)         :: 56 of 71
            Pseudo Genes (internal stop)      :: 6 of 71
            Pseudo Genes (multiple problems)  :: 7 of 71
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4852378
                     /organism="Aeromonas dhakensis"
                     /mol_type="genomic DNA"
                     /isolate="ena-yuan-GCF_006246145.1"
                     /db_xref="taxon:196024"
WGS         CAWOOV010000001-CAWOOV010000082
WGS_SCAFLD  NZ_CAWOOV010000001-NZ_CAWOOV010000082
//
LOCUS       NZ_CAWPNI010000000   4670223 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas veronii isolate ena-yuan-GCF_015208765.1, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CAWPNI000000000
VERSION     NZ_CAWPNI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA115018361
            Assembly: GCF_963889605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas veronii (Aeromonas ichthiosmia)
  ORGANISM  Aeromonas veronii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4670223)
  AUTHORS   Yuan,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2023) NAU, Nanjing 210095, China, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAWPNI000000000.1.
            The Aeromonas veronii whole genome shotgun (WGS) project has the
            project accession NZ_CAWPNI000000000.  This version of the project
            (01) has the accession number NZ_CAWPNI010000000, and consists of
            sequences CAWPNI010000001-CAWPNI010000041.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_963889605.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:13:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,312
            CDSs (total)                      :: 4,213
            Genes (coding)                    :: 4,174
            CDSs (with protein)               :: 4,174
            Genes (RNA)                       :: 99
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 90
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 11 of 39
            Pseudo Genes (incomplete)         :: 31 of 39
            Pseudo Genes (internal stop)      :: 5 of 39
            Pseudo Genes (multiple problems)  :: 6 of 39
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4670223
                     /organism="Aeromonas veronii"
                     /mol_type="genomic DNA"
                     /isolate="ena-yuan-GCF_015208765.1"
                     /db_xref="taxon:654"
WGS         CAWPNI010000001-CAWPNI010000041
WGS_SCAFLD  NZ_CAWPNI010000001-NZ_CAWPNI010000041
//
LOCUS       NZ_CAWOIQ010000000   4933541 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas dhakensis isolate ena-yuan-GCF_003989145.1, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CAWOIQ000000000
VERSION     NZ_CAWOIQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA115017805
            Assembly: GCF_963880855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4933541)
  AUTHORS   Yuan,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-DEC-2023) NAU, Nanjing 210095, China, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAWOIQ000000000.1.
            The Aeromonas dhakensis whole genome shotgun (WGS) project has the
            project accession NZ_CAWOIQ000000000.  This version of the project
            (01) has the accession number NZ_CAWOIQ010000000, and consists of
            sequences CAWOIQ010000001-CAWOIQ010000193.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_963880855.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:17:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,688
            CDSs (total)                      :: 4,550
            Genes (coding)                    :: 4,476
            CDSs (with protein)               :: 4,476
            Genes (RNA)                       :: 138
            rRNAs                             :: 11, 9, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 10, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 8, 3 (5S, 16S, 23S)
            tRNAs                             :: 107
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 22 of 74
            Pseudo Genes (incomplete)         :: 59 of 74
            Pseudo Genes (internal stop)      :: 7 of 74
            Pseudo Genes (multiple problems)  :: 10 of 74
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4933541
                     /organism="Aeromonas dhakensis"
                     /mol_type="genomic DNA"
                     /isolate="ena-yuan-GCF_003989145.1"
                     /db_xref="taxon:196024"
WGS         CAWOIQ010000001-CAWOIQ010000193
WGS_SCAFLD  NZ_CAWOIQ010000001-NZ_CAWOIQ010000193
//
LOCUS       NZ_JAODZR010000000   4341061 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas caviae strain GD04134, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAODZR000000000
VERSION     NZ_JAODZR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN30525590
            Assembly: GCF_029835355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas caviae
  ORGANISM  Aeromonas caviae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4341061)
  AUTHORS   Diorio-Toth,L.
  TITLE     Intensive care unit water sources are persistently colonized with
            multi-drug resistant bacteria and are the site of extensive
            horizontal gene transfer of antibiotic resistance genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4341061)
  AUTHORS   Diorio-Toth,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-SEP-2022) Computational and Systems Biology,
            Washington University in St. Louis School of Medicine, 660 S Euclid
            Ave, St. Louis, MO 63110, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAODZR000000000.1.
            The Aeromonas caviae whole genome shotgun (WGS) project has the
            project accession NZ_JAODZR000000000.  This version of the project
            (01) has the accession number NZ_JAODZR010000000, and consists of
            sequences JAODZR010000001-JAODZR010000189.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150.045x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029835355.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:19:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,066
            CDSs (total)                      :: 3,967
            Genes (coding)                    :: 3,897
            CDSs (with protein)               :: 3,897
            Genes (RNA)                       :: 99
            rRNAs                             :: 1, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 35 of 70
            Pseudo Genes (incomplete)         :: 45 of 70
            Pseudo Genes (internal stop)      :: 5 of 70
            Pseudo Genes (multiple problems)  :: 12 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4341061
                     /organism="Aeromonas caviae"
                     /mol_type="genomic DNA"
                     /strain="GD04134"
                     /isolation_source="surface swab"
                     /db_xref="taxon:648"
                     /geo_loc_name="Pakistan"
                     /collection_date="2018-07-18"
WGS         JAODZR010000001-JAODZR010000189
WGS_SCAFLD  NZ_JAODZR010000001-NZ_JAODZR010000189
//
LOCUS       NZ_JAAKRN010000000   4493333 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aeromonas veronii strain 602535, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAAKRN000000000
VERSION     NZ_JAAKRN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14146776
            Assembly: GCF_049173395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas veronii (Aeromonas ichthiosmia)
  ORGANISM  Aeromonas veronii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4493333)
  AUTHORS   Hazen,T.H., Michalski,J.M., Tennant,S. and Rasko,D.A.
  TITLE     Genome sequencing of Aeromonas species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4493333)
  AUTHORS   Hazen,T.H., Michalski,J.M., Tennant,S. and Rasko,D.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2020) Institute for Genome Sciences, University
            of Maryland, School of Medicine, 670 W. Baltimore St., Baltimore,
            MD 21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAKRN000000000.1.
            The Aeromonas veronii whole genome shotgun (WGS) project has the
            project accession NZ_JAAKRN000000000.  This version of the project
            (01) has the accession number NZ_JAAKRN010000000, and consists of
            sequences JAAKRN010000001-JAAKRN010000067.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 255.89817313784667x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049173395.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:46:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,162
            CDSs (total)                      :: 4,082
            Genes (coding)                    :: 4,041
            CDSs (with protein)               :: 4,041
            Genes (RNA)                       :: 80
            rRNAs                             :: 2, 5, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 5, 4 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 41
            CDSs (without protein)            :: 41
            Pseudo Genes (ambiguous residues) :: 0 of 41
            Pseudo Genes (frameshifted)       :: 18 of 41
            Pseudo Genes (incomplete)         :: 31 of 41
            Pseudo Genes (internal stop)      :: 6 of 41
            Pseudo Genes (multiple problems)  :: 11 of 41
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4493333
                     /organism="Aeromonas veronii"
                     /mol_type="genomic DNA"
                     /strain="602535"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:654"
                     /geo_loc_name="Bangladesh"
                     /lat_lon="23.6850 N 90.3563 E"
                     /collected_by="University of Maryland, School of Medicine,
                     Center for Vaccine Development"
WGS         JAAKRN010000001-JAAKRN010000067
WGS_SCAFLD  NZ_JAAKRN010000001-NZ_JAAKRN010000067
//
LOCUS       NZ_JBCDPT010000000   3763114 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Acinetobacter ursingii strain RIT_GXS22, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBCDPT000000000
VERSION     NZ_JBCDPT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40577844
            Assembly: GCF_038432355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter ursingii
  ORGANISM  Acinetobacter ursingii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter.
REFERENCE   1  (bases 1 to 3763114)
  AUTHORS   Kumar,G. and Savka,M.A.
  TITLE     Whole genomes of four grape xylem sap localized bacterial
            endophytes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3763114)
  AUTHORS   Kumar,G. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-APR-2024) Thomas H. Gosnell School of Life Sciences,
            Rochester Institute of Technology, 85 Lomb Memorial Dr., Rochester,
            NY 14623, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCDPT000000000.1.
            The Acinetobacter ursingii whole genome shotgun (WGS) project has
            the project accession NZ_JBCDPT000000000.  This version of the
            project (01) has the accession number NZ_JBCDPT010000000, and
            consists of sequences JBCDPT010000001-JBCDPT010000164.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 287.9905163x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038432355.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:38:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,597
            CDSs (total)                      :: 3,525
            Genes (coding)                    :: 3,419
            CDSs (with protein)               :: 3,419
            Genes (RNA)                       :: 72
            rRNAs                             :: 3, 3 (16S, 23S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 106
            CDSs (without protein)            :: 106
            Pseudo Genes (ambiguous residues) :: 0 of 106
            Pseudo Genes (frameshifted)       :: 31 of 106
            Pseudo Genes (incomplete)         :: 77 of 106
            Pseudo Genes (internal stop)      :: 18 of 106
            Pseudo Genes (multiple problems)  :: 15 of 106
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3763114
                     /organism="Acinetobacter ursingii"
                     /mol_type="genomic DNA"
                     /strain="RIT_GXS22"
                     /isolation_source="Grape vine xylem sap"
                     /host="Vitis vinifera"
                     /db_xref="taxon:108980"
                     /geo_loc_name="USA: Cornell University USDA Geneva"
                     /collection_date="2006-03"
WGS         JBCDPT010000001-JBCDPT010000164
WGS_SCAFLD  NZ_JBCDPT010000001-NZ_JBCDPT010000164
//
LOCUS       NZ_AWFK01000000      2175740 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium animalis subsp. animalis MCC 0483, whole genome
            shotgun sequencing project.
ACCESSION   NZ_AWFK00000000
VERSION     NZ_AWFK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03978806
            Assembly: GCF_001263945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium animalis subsp. animalis MCC 0483
  ORGANISM  Bifidobacterium animalis subsp. animalis MCC 0483
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2175740)
  AUTHORS   Odamaki,T., Horigome,A., Sugahara,H., Hashikura,N., Minami,J.,
            Xiao,J.Z. and Abe,F.
  TITLE     Comparative Genomics Revealed Genetic Diversity and
            Species/Strain-Level Differences in Carbohydrate Metabolism of
            Three Probiotic Bifidobacterial Species
  JOURNAL   Int J Genomics 2015, 567809 (2015)
   PUBMED   26236711
REFERENCE   2  (bases 1 to 2175740)
  AUTHORS   Odamaki,T., Horigome,A., Sugahara,H., Hashikura,N., Xiao,J.-Z. and
            Abe,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-AUG-2013) Biological Function Research Depertment,
            Food Science and Technology Institute, Morinaga Milk Industry Co.,
            Ltd, 5-1-83 Higashihara, Zama, Kanagawa 252-8583, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AWFK00000000.1.
            The Bifidobacterium animalis subsp. animalis MCC 0483 whole genome
            shotgun (WGS) project has the project accession NZ_AWFK00000000.
            This version of the project (01) has the accession number
            NZ_AWFK01000000, and consists of sequences
            AWFK01000001-AWFK01000027.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria available from Food Science and Technology Institute,
            Morinaga Milk Industry Co.,  Ltd., 5-1-83 Higashihara, Zama-City,
            Kanagawa-Pref. 252-8583, Japan.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC De Novo Assembly v. 6.0
            Expected Final Version :: Yes
            Genome Coverage        :: 142.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001263945.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:35:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,865
            CDSs (total)                      :: 1,806
            Genes (coding)                    :: 1,769
            CDSs (with protein)               :: 1,769
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 11 of 37
            Pseudo Genes (incomplete)         :: 22 of 37
            Pseudo Genes (internal stop)      :: 8 of 37
            Pseudo Genes (multiple problems)  :: 4 of 37
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2175740
                     /organism="Bifidobacterium animalis subsp. animalis MCC
                     0483"
                     /mol_type="genomic DNA"
                     /strain="MCC 0483"
                     /isolation_source="feces"
                     /host="rat"
                     /sub_species="animalis"
                     /db_xref="taxon:1365955"
                     /geo_loc_name="Japan"
WGS         AWFK01000001-AWFK01000027
WGS_SCAFLD  NZ_AWFK01000001-NZ_AWFK01000027
//
LOCUS       NZ_AWFN01000000      2133526 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium animalis subsp. animalis MCC 0499, whole genome
            shotgun sequencing project.
ACCESSION   NZ_AWFN00000000
VERSION     NZ_AWFN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03978809
            Assembly: GCF_001263865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium animalis subsp. animalis MCC 0499
  ORGANISM  Bifidobacterium animalis subsp. animalis MCC 0499
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2133526)
  AUTHORS   Odamaki,T., Horigome,A., Sugahara,H., Hashikura,N., Minami,J.,
            Xiao,J.Z. and Abe,F.
  TITLE     Comparative Genomics Revealed Genetic Diversity and
            Species/Strain-Level Differences in Carbohydrate Metabolism of
            Three Probiotic Bifidobacterial Species
  JOURNAL   Int J Genomics 2015, 567809 (2015)
   PUBMED   26236711
REFERENCE   2  (bases 1 to 2133526)
  AUTHORS   Odamaki,T., Horigome,A., Sugahara,H., Hashikura,N., Xiao,J.-Z. and
            Abe,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-AUG-2013) Biological Function Research Depertment,
            Food Science and Technology Institute, Morinaga Milk Industry Co.,
            Ltd, 5-1-83 Higashihara, Zama, Kanagawa 252-8583, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AWFN00000000.1.
            The Bifidobacterium animalis subsp. animalis MCC 0499 whole genome
            shotgun (WGS) project has the project accession NZ_AWFN00000000.
            This version of the project (01) has the accession number
            NZ_AWFN01000000, and consists of sequences
            AWFN01000001-AWFN01000011.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria available from Food Science and Technology Institute,
            Morinaga Milk Industry Co.,  Ltd., 5-1-83 Higashihara, Zama-City,
            Kanagawa-Pref. 252-8583, Japan.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC De Novo Assembly v. 6.0
            Expected Final Version :: Yes
            Genome Coverage        :: 191.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001263865.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:35:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,854
            CDSs (total)                      :: 1,785
            Genes (coding)                    :: 1,750
            CDSs (with protein)               :: 1,750
            Genes (RNA)                       :: 69
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 10 of 35
            Pseudo Genes (incomplete)         :: 22 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 3 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2133526
                     /organism="Bifidobacterium animalis subsp. animalis MCC
                     0499"
                     /mol_type="genomic DNA"
                     /strain="MCC 0499"
                     /isolation_source="feces"
                     /host="rat"
                     /sub_species="animalis"
                     /db_xref="taxon:1365956"
                     /geo_loc_name="Japan"
WGS         AWFN01000001-AWFN01000011
WGS_SCAFLD  NZ_AWFN01000001-NZ_AWFN01000011
//
LOCUS       NZ_AVQD01000000      2480222 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium breve MCC 1128, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AVQD00000000
VERSION     NZ_AVQD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03978799
            Assembly: GCF_001263915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium breve MCC 1128
  ORGANISM  Bifidobacterium breve MCC 1128
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2480222)
  AUTHORS   Odamaki,T., Horigome,A., Sugahara,H., Hashikura,N., Minami,J.,
            Xiao,J.Z. and Abe,F.
  TITLE     Comparative Genomics Revealed Genetic Diversity and
            Species/Strain-Level Differences in Carbohydrate Metabolism of
            Three Probiotic Bifidobacterial Species
  JOURNAL   Int J Genomics 2015, 567809 (2015)
   PUBMED   26236711
REFERENCE   2  (bases 1 to 2480222)
  AUTHORS   Odamaki,T., Horigome,A., Sugahara,H., Hashikura,N., Xiao,J.-Z. and
            Abe,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-AUG-2013) Biological Function Research Depertment,
            Food Science and Technology Institute, Morinaga Milk Industry Co.,
            Ltd, 5-1-83 Higashihara, Zama, Kanagawa 252-8583, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AVQD00000000.1.
            The Bifidobacterium breve MCC 1128 whole genome shotgun (WGS)
            project has the project accession NZ_AVQD00000000.  This version of
            the project (01) has the accession number NZ_AVQD01000000, and
            consists of sequences AVQD01000001-AVQD01000025.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria available from Food Science and Technology Institute,
            Morinaga Milk Industry Co.,  Ltd., 5-1-83 Higashihara, Zama-City,
            Kanagawa-Pref. 252-8583, Japan.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC De Novo Assembly v. 6.0
            Expected Final Version :: Yes
            Genome Coverage        :: 133.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001263915.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:39:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,238
            CDSs (total)                      :: 2,172
            Genes (coding)                    :: 2,080
            CDSs (with protein)               :: 2,080
            Genes (RNA)                       :: 66
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 59
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 27 of 92
            Pseudo Genes (incomplete)         :: 76 of 92
            Pseudo Genes (internal stop)      :: 8 of 92
            Pseudo Genes (multiple problems)  :: 17 of 92
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2480222
                     /organism="Bifidobacterium breve MCC 1128"
                     /mol_type="genomic DNA"
                     /strain="MCC 1128"
                     /isolation_source="infant feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:1365965"
                     /geo_loc_name="Japan"
WGS         AVQD01000001-AVQD01000025
WGS_SCAFLD  NZ_AVQD01000001-NZ_AVQD01000025
//
LOCUS       NZ_AVQE01000000      2206390 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium breve MCC 1604, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AVQE00000000
VERSION     NZ_AVQE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03978800
            Assembly: GCF_001264155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium breve MCC 1604
  ORGANISM  Bifidobacterium breve MCC 1604
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2206390)
  AUTHORS   Odamaki,T., Horigome,A., Sugahara,H., Hashikura,N., Minami,J.,
            Xiao,J.Z. and Abe,F.
  TITLE     Comparative Genomics Revealed Genetic Diversity and
            Species/Strain-Level Differences in Carbohydrate Metabolism of
            Three Probiotic Bifidobacterial Species
  JOURNAL   Int J Genomics 2015, 567809 (2015)
   PUBMED   26236711
REFERENCE   2  (bases 1 to 2206390)
  AUTHORS   Odamaki,T., Horigome,A., Sugahara,H., Hashikura,N., Xiao,J.-Z. and
            Abe,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-AUG-2013) Biological Function Research Depertment,
            Food Science and Technology Institute, Morinaga Milk Industry Co.,
            Ltd, 5-1-83 Higashihara, Zama, Kanagawa 252-8583, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AVQE00000000.1.
            The Bifidobacterium breve MCC 1604 whole genome shotgun (WGS)
            project has the project accession NZ_AVQE00000000.  This version of
            the project (01) has the accession number NZ_AVQE01000000, and
            consists of sequences AVQE01000001-AVQE01000015.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria available from Food Science and Technology Institute,
            Morinaga Milk Industry Co.,  Ltd., 5-1-83 Higashihara, Zama-City,
            Kanagawa-Pref. 252-8583, Japan.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC De Novo Assembly v. 6.0
            Expected Final Version :: Yes
            Genome Coverage        :: 136.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001264155.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:41:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,925
            CDSs (total)                      :: 1,866
            Genes (coding)                    :: 1,775
            CDSs (with protein)               :: 1,775
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 23 of 91
            Pseudo Genes (incomplete)         :: 74 of 91
            Pseudo Genes (internal stop)      :: 11 of 91
            Pseudo Genes (multiple problems)  :: 14 of 91
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2206390
                     /organism="Bifidobacterium breve MCC 1604"
                     /mol_type="genomic DNA"
                     /strain="MCC 1604"
                     /isolation_source="feces from an elderly person"
                     /host="Homo sapiens"
                     /db_xref="taxon:1365968"
                     /geo_loc_name="Japan"
WGS         AVQE01000001-AVQE01000015
WGS_SCAFLD  NZ_AVQE01000001-NZ_AVQE01000015
//
LOCUS       NZ_AWFQ01000000      1989883 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium animalis subsp. animalis ATCC 27672, whole genome
            shotgun sequencing project.
ACCESSION   NZ_AWFQ00000000
VERSION     NZ_AWFQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03978812
            Assembly: GCF_001264055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium animalis subsp. animalis ATCC 27672
  ORGANISM  Bifidobacterium animalis subsp. animalis ATCC 27672
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 1989883)
  AUTHORS   Odamaki,T., Horigome,A., Sugahara,H., Hashikura,N., Minami,J.,
            Xiao,J.Z. and Abe,F.
  TITLE     Comparative Genomics Revealed Genetic Diversity and
            Species/Strain-Level Differences in Carbohydrate Metabolism of
            Three Probiotic Bifidobacterial Species
  JOURNAL   Int J Genomics 2015, 567809 (2015)
   PUBMED   26236711
REFERENCE   2  (bases 1 to 1989883)
  AUTHORS   Odamaki,T., Horigome,A., Sugahara,H., Hashikura,N., Xiao,J.-Z. and
            Abe,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-AUG-2013) Biological Function Research Depertment,
            Food Science and Technology Institute, Morinaga Milk Industry Co.,
            Ltd, 5-1-83 Higashihara, Zama, Kanagawa 252-8583, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AWFQ00000000.1.
            The Bifidobacterium animalis subsp. animalis ATCC 27672 whole
            genome shotgun (WGS) project has the project accession
            NZ_AWFQ00000000.  This version of the project (01) has the
            accession number NZ_AWFQ01000000, and consists of sequences
            AWFQ01000001-AWFQ01000010.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC De Novo Assembly v. 6.0
            Expected Final Version :: Yes
            Genome Coverage        :: 147.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001264055.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:38:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,656
            CDSs (total)                      :: 1,598
            Genes (coding)                    :: 1,566
            CDSs (with protein)               :: 1,566
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 10 of 32
            Pseudo Genes (incomplete)         :: 18 of 32
            Pseudo Genes (internal stop)      :: 6 of 32
            Pseudo Genes (multiple problems)  :: 2 of 32
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1989883
                     /organism="Bifidobacterium animalis subsp. animalis ATCC
                     27672"
                     /mol_type="genomic DNA"
                     /strain="ATCC 27672"
                     /isolation_source="feces"
                     /host="rat"
                     /sub_species="animalis"
                     /culture_collection="ATCC:27672"
                     /db_xref="taxon:1365959"
                     /geo_loc_name="Japan"
WGS         AWFQ01000001-AWFQ01000010
WGS_SCAFLD  NZ_AWFQ01000001-NZ_AWFQ01000010
//
LOCUS       NZ_AVQC01000000      2487280 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium breve MCC 1114, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AVQC00000000
VERSION     NZ_AVQC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03978798
            Assembly: GCF_001263855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium breve MCC 1114
  ORGANISM  Bifidobacterium breve MCC 1114
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2487280)
  AUTHORS   Odamaki,T., Horigome,A., Sugahara,H., Hashikura,N., Minami,J.,
            Xiao,J.Z. and Abe,F.
  TITLE     Comparative Genomics Revealed Genetic Diversity and
            Species/Strain-Level Differences in Carbohydrate Metabolism of
            Three Probiotic Bifidobacterial Species
  JOURNAL   Int J Genomics 2015, 567809 (2015)
   PUBMED   26236711
REFERENCE   2  (bases 1 to 2487280)
  AUTHORS   Odamaki,T., Horigome,A., Sugahara,H., Hashikura,N., Xiao,J.-Z. and
            Abe,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-AUG-2013) Biological Function Research Depertment,
            Food Science and Technology Institute, Morinaga Milk Industry Co.,
            Ltd, 5-1-83 Higashihara, Zama, Kanagawa 252-8583, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AVQC00000000.1.
            The Bifidobacterium breve MCC 1114 whole genome shotgun (WGS)
            project has the project accession NZ_AVQC00000000.  This version of
            the project (01) has the accession number NZ_AVQC01000000, and
            consists of sequences AVQC01000001-AVQC01000033.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria available from Food Science and Technology Institute,
            Morinaga Milk Industry Co.,  Ltd., 5-1-83 Higashihara, Zama-City,
            Kanagawa-Pref. 252-8583, Japan.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC De Novo Assembly v. 6.0
            Expected Final Version :: Yes
            Genome Coverage        :: 102.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001263855.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:40:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,221
            CDSs (total)                      :: 2,161
            Genes (coding)                    :: 2,057
            CDSs (with protein)               :: 2,057
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 104
            CDSs (without protein)            :: 104
            Pseudo Genes (ambiguous residues) :: 0 of 104
            Pseudo Genes (frameshifted)       :: 34 of 104
            Pseudo Genes (incomplete)         :: 82 of 104
            Pseudo Genes (internal stop)      :: 9 of 104
            Pseudo Genes (multiple problems)  :: 20 of 104
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2487280
                     /organism="Bifidobacterium breve MCC 1114"
                     /mol_type="genomic DNA"
                     /strain="MCC 1114"
                     /isolation_source="infant feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:1365964"
                     /geo_loc_name="Japan"
WGS         AVQC01000001-AVQC01000033
WGS_SCAFLD  NZ_AVQC01000001-NZ_AVQC01000033
//
LOCUS       NZ_CCBL010000000     1917261 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bartonella doshiae strain BM1374167, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CCBL000000000
VERSION     NZ_CCBL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3146312
            Assembly: GCF_900005695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bartonella doshiae
  ORGANISM  Bartonella doshiae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Bartonellaceae; Bartonella.
REFERENCE   1
  AUTHORS   Raoult,D.
  TITLE     Genome sequencing of Bartonella spp. isolated from human blood
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1917261)
  AUTHORS   GENOMES,U.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2013) Fac de medecine, URMITE, 27 Bd J Moulin,
            13385 Marseille Cedex 05, FRANCE
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CCBL000000000.1.
            The Bartonella doshiae whole genome shotgun (WGS) project has the
            project accession NZ_CCBL000000000.  This version of the project
            (01) has the accession number NZ_CCBL010000000, and consists of
            sequences CCBL010000001-CCBL010000013.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900005695.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:39:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,687
            CDSs (total)                      :: 1,626
            Genes (coding)                    :: 1,553
            CDSs (with protein)               :: 1,553
            Genes (RNA)                       :: 61
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 2, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 73
            CDSs (without protein)            :: 73
            Pseudo Genes (ambiguous residues) :: 0 of 73
            Pseudo Genes (frameshifted)       :: 43 of 73
            Pseudo Genes (incomplete)         :: 45 of 73
            Pseudo Genes (internal stop)      :: 20 of 73
            Pseudo Genes (multiple problems)  :: 29 of 73
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1917261
                     /organism="Bartonella doshiae"
                     /mol_type="genomic DNA"
                     /strain="BM1374167"
                     /db_xref="taxon:33044"
WGS         CCBL010000001-CCBL010000013
WGS_SCAFLD  NZ_CCBL010000001-NZ_CCBL010000013
//
LOCUS       NZ_LITX01000000      3262309 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella abortus strain 11796, whole genome shotgun sequencing
            project.
ACCESSION   NZ_LITX00000000
VERSION     NZ_LITX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03965478
            Assembly: GCF_001401925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella abortus (Brucella melitensis biovar Abortus)
  ORGANISM  Brucella abortus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3262309)
  AUTHORS   Garofolo,G., Foster,J.T., Drees,K., Zilli,K., Platone,I.,
            Ancora,M., Camma,C., De Massis,F., Calistri,P. and Di Giannatale,E.
  TITLE     Genome Sequences of 11 Brucella abortus Isolates from Persistently
            Infected Italian Regions
  JOURNAL   Genome Announc 3 (6), e01402-15 (2015)
   PUBMED   26679575
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3262309)
  AUTHORS   Drees,K., Garofolo,G. and Foster,J.
  TITLE     Phylogeny of Brucella abortus in Italy
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 3262309)
  AUTHORS   Drees,K., Garofolo,G. and Foster,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2015) Molecular, Cellular, & Biomedical Sciences,
            University of New Hampshire, 46 College Rd, Durham, NH 03823, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LITX00000000.1.
            The Brucella abortus whole genome shotgun (WGS) project has the
            project accession NZ_LITX00000000.  This version of the project
            (01) has the accession number NZ_LITX01000000, and consists of
            sequences LITX01000001-LITX01000016.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2015
            Assembly Method        :: SPAdes v. 3.0.0; pilon v. 1.8; sspace v.
                                      3.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 44.75x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001401925.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:52:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,229
            CDSs (total)                      :: 3,172
            Genes (coding)                    :: 2,991
            CDSs (with protein)               :: 2,991
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 181
            CDSs (without protein)            :: 181
            Pseudo Genes (ambiguous residues) :: 0 of 181
            Pseudo Genes (frameshifted)       :: 125 of 181
            Pseudo Genes (incomplete)         :: 43 of 181
            Pseudo Genes (internal stop)      :: 34 of 181
            Pseudo Genes (multiple problems)  :: 19 of 181
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3262309
                     /organism="Brucella abortus"
                     /mol_type="genomic DNA"
                     /strain="11796"
                     /isolation_source="spleen, lymph nodes"
                     /host="cattle"
                     /db_xref="taxon:235"
                     /geo_loc_name="Italy: Sicilia, Messina, Tusa"
                     /lat_lon="37.98 N 14.23 E"
                     /collection_date="2011"
                     /collected_by="Giuliano Garofolo"
                     /biovar="3"
WGS         LITX01000001-LITX01000016
WGS_SCAFLD  NZ_LITX01000001-NZ_LITX01000016
//
LOCUS       NZ_FMXQ01000000      5094548 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bauldia litoralis strain ATCC 35022, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FMXQ00000000
VERSION     NZ_FMXQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02982931
            Assembly: GCF_900104485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bauldia litoralis
  ORGANISM  Bauldia litoralis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Kaistiaceae; Bauldia.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FMXQ00000000.1.
            The Bauldia litoralis whole genome shotgun (WGS) project has the
            project accession NZ_FMXQ00000000.  This version of the project
            (01) has the accession number NZ_FMXQ01000000, and consists of
            sequences FMXQ01000001-FMXQ01000029.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900104485.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:02:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,830
            CDSs (total)                      :: 4,777
            Genes (coding)                    :: 4,738
            CDSs (with protein)               :: 4,738
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 18 of 39
            Pseudo Genes (incomplete)         :: 29 of 39
            Pseudo Genes (internal stop)      :: 4 of 39
            Pseudo Genes (multiple problems)  :: 10 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5094548
                     /organism="Bauldia litoralis"
                     /mol_type="genomic DNA"
                     /strain="ATCC 35022"
                     /type_material="type strain of Prosthecomicrobium
                     litoralum"
                     /db_xref="taxon:665467"
                     /geo_loc_name="USA:Puget Sound, Washington, USA"
WGS         FMXQ01000001-FMXQ01000029
WGS_SCAFLD  NZ_FMXQ01000001-NZ_FMXQ01000029
//
LOCUS       NZ_FOAL01000000      6227139 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacteroides thetaiotaomicron strain KPPR-3, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOAL00000000
VERSION     NZ_FOAL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02910322
            Assembly: GCF_900109385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacteroides thetaiotaomicron
  ORGANISM  Bacteroides thetaiotaomicron
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Bacteroidaceae; Bacteroides.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOAL00000000.1.
            The Bacteroides thetaiotaomicron whole genome shotgun (WGS) project
            has the project accession NZ_FOAL00000000.  This version of the
            project (01) has the accession number NZ_FOAL01000000, and consists
            of sequences FOAL01000001-FOAL01000038.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900109385.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:26:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,867
            CDSs (total)                      :: 4,796
            Genes (coding)                    :: 4,720
            CDSs (with protein)               :: 4,720
            Genes (RNA)                       :: 71
            rRNAs                             :: 5, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 21 of 76
            Pseudo Genes (incomplete)         :: 52 of 76
            Pseudo Genes (internal stop)      :: 15 of 76
            Pseudo Genes (multiple problems)  :: 10 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6227139
                     /organism="Bacteroides thetaiotaomicron"
                     /mol_type="genomic DNA"
                     /strain="KPPR-3"
                     /db_xref="taxon:818"
WGS         FOAL01000001-FOAL01000038
WGS_SCAFLD  NZ_FOAL01000001-NZ_FOAL01000038
//
LOCUS       NZ_CBBWLX010000000   3111092 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Aquidulcibacter sp. isolate
            PELAGICS-MAG-mn-bin005088-MILAE-LM-27jul20., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBBWLX000000000
VERSION     NZ_CBBWLX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117457657
            Assembly: GCF_964988465.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Aquidulcibacter sp. (freshwater metagenome)
  ORGANISM  Aquidulcibacter sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Caulobacterales; Caulobacteraceae; Aquidulcibacter.
REFERENCE   1  (bases 1 to 3111092)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JAN-2025) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBBWLX000000000.1.
            The Aquidulcibacter sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBBWLX000000000.  This version of the project
            (01) has the accession number NZ_CBBWLX010000000, and consists of
            sequences CBBWLX010000001-CBBWLX010000097.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964988465.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 01:18:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,973
            CDSs (total)                      :: 2,924
            Genes (coding)                    :: 2,893
            CDSs (with protein)               :: 2,893
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 4 of 31
            Pseudo Genes (incomplete)         :: 29 of 31
            Pseudo Genes (internal stop)      :: 5 of 31
            Pseudo Genes (multiple problems)  :: 6 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3111092
                     /organism="Aquidulcibacter sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-mn-bin005088-MILAE-LM-27jul20."
                     /isolation_source="Milada lake"
                     /db_xref="taxon:2052990"
                     /environmental_sample
                     /geo_loc_name="Czechia"
                     /collection_date="2020-07-27"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBBWLX010000001-CBBWLX010000097
WGS_SCAFLD  NZ_CBBWLX010000001-NZ_CBBWLX010000097
//
LOCUS       NZ_FOUM01000000      5867922 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacteroides xylanisolvens strain NLAE-zl-C202, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOUM00000000
VERSION     NZ_FOUM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05216250
            Assembly: GCF_900114865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacteroides xylanisolvens
  ORGANISM  Bacteroides xylanisolvens
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Bacteroidaceae; Bacteroides.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOUM00000000.1.
            The Bacteroides xylanisolvens whole genome shotgun (WGS) project
            has the project accession NZ_FOUM00000000.  This version of the
            project (01) has the accession number NZ_FOUM01000000, and consists
            of sequences FOUM01000001-FOUM01000093.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900114865.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:31:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,662
            CDSs (total)                      :: 4,589
            Genes (coding)                    :: 4,483
            CDSs (with protein)               :: 4,483
            Genes (RNA)                       :: 73
            rRNAs                             :: 5, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 106
            CDSs (without protein)            :: 106
            Pseudo Genes (ambiguous residues) :: 0 of 106
            Pseudo Genes (frameshifted)       :: 25 of 106
            Pseudo Genes (incomplete)         :: 86 of 106
            Pseudo Genes (internal stop)      :: 18 of 106
            Pseudo Genes (multiple problems)  :: 19 of 106
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5867922
                     /organism="Bacteroides xylanisolvens"
                     /mol_type="genomic DNA"
                     /strain="NLAE-zl-C202"
                     /db_xref="taxon:371601"
WGS         FOUM01000001-FOUM01000093
WGS_SCAFLD  NZ_FOUM01000001-NZ_FOUM01000093
//
LOCUS       NZ_QDJA01000000      2226658 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium bifidum strain DS25_23, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QDJA00000000
VERSION     NZ_QDJA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08949001
            Assembly: GCF_003094795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium bifidum
  ORGANISM  Bifidobacterium bifidum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2226658)
  AUTHORS   Barnaba,T.J., Gangiredla,J., Mammel,M.K., Lacher,D.W., Elkins,C.A.,
            Lampel,K.A., Whitehouse,C.A. and Tartera,C.
  TITLE     Draft Genome Sequences of Bifidobacterium Strains Isolated from
            Dietary Supplements and Cultured Food Products
  JOURNAL   Genome Announc 6 (26), e00610-18 (2018)
   PUBMED   29954907
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2226658)
  AUTHORS   Barnaba,T.J., Gangiredla,J., Mammel,M.K., Lacher,D.W., Elkins,C.A.,
            Lampel,K.A., Whitehouse,C.A. and Tartera,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-APR-2018) Department of Molecular Biology, USFDA,
            8301 Muirkirk Road, Laurel, MD 20708, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QDJA00000000.1.
            The Bifidobacterium bifidum whole genome shotgun (WGS) project has
            the project accession NZ_QDJA00000000.  This version of the project
            (01) has the accession number NZ_QDJA01000000, and consists of
            sequences QDJA01000001-QDJA01000063.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: APR-2018
            Assembly Method        :: CLC NGS Cell v. 11
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 36.7x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003094795.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:50:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,916
            CDSs (total)                      :: 1,855
            Genes (coding)                    :: 1,773
            CDSs (with protein)               :: 1,773
            Genes (RNA)                       :: 61
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 31 of 82
            Pseudo Genes (incomplete)         :: 63 of 82
            Pseudo Genes (internal stop)      :: 5 of 82
            Pseudo Genes (multiple problems)  :: 16 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2226658
                     /organism="Bifidobacterium bifidum"
                     /mol_type="genomic DNA"
                     /strain="DS25_23"
                     /isolation_source="Commercial dietary supplements"
                     /host="Homo sapiens"
                     /db_xref="taxon:1681"
                     /geo_loc_name="USA: MD"
                     /collection_date="2017-03-29"
WGS         QDJA01000001-QDJA01000063
WGS_SCAFLD  NZ_QDJA01000001-NZ_QDJA01000063
//
LOCUS       NZ_SHQT01000000      2320556 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium longum subsp. longum strain MCC10042, whole genome
            shotgun sequencing project.
ACCESSION   NZ_SHQT00000000
VERSION     NZ_SHQT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06368602
            Assembly: GCF_004333675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium longum subsp. longum
  ORGANISM  Bifidobacterium longum subsp. longum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2320556)
  AUTHORS   Odamaki,T., Bottacini,F., Kato,K., Mitsuyama,E., Yoshida,K.,
            Horigome,A., Xiao,J.Z. and van Sinderen,D.
  TITLE     Genomic diversity and distribution of Bifidobacterium longum subsp.
            longum across the human lifespan
  JOURNAL   Sci Rep 8 (1), 85 (2018)
   PUBMED   29311585
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2320556)
  AUTHORS   Odamaki,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-FEB-2019) Next Generation Science Institute, Morinaga
            Milk Industry, Higashihara 5-Chome, 1-83, Zama 2528583, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SHQT00000000.1.
            The Bifidobacterium longum subsp. longum whole genome shotgun (WGS)
            project has the project accession NZ_SHQT00000000.  This version of
            the project (01) has the accession number NZ_SHQT01000000, and
            consists of sequences SHQT01000001-SHQT01000053.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 67x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004333675.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:21:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,001
            CDSs (total)                      :: 1,939
            Genes (coding)                    :: 1,893
            CDSs (with protein)               :: 1,893
            Genes (RNA)                       :: 62
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 56
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 38 of 46
            Pseudo Genes (internal stop)      :: 3 of 46
            Pseudo Genes (multiple problems)  :: 4 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2320556
                     /organism="Bifidobacterium longum subsp. longum"
                     /mol_type="genomic DNA"
                     /strain="MCC10042"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /sub_species="longum"
                     /db_xref="taxon:1679"
                     /geo_loc_name="Japan"
                     /collection_date="2015"
WGS         SHQT01000001-SHQT01000053
WGS_SCAFLD  NZ_SHQT01000001-NZ_SHQT01000053
//
LOCUS       NZ_JMHW01000000      6386251 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus thuringiensis serovar kurstaki str. HD-1, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JMHW00000000
VERSION     NZ_JMHW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02641787
            Assembly: GCF_000710255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus thuringiensis serovar kurstaki str. HD-1
  ORGANISM  Bacillus thuringiensis serovar kurstaki str. HD-1
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 6386251)
  AUTHORS   Day,M., Ibrahim,M., Dyer,D. and Bulla,L. Jr.
  TITLE     Genome Sequence of Bacillus thuringiensis subsp. kurstaki Strain
            HD-1
  JOURNAL   Genome Announc 2 (4), e00613-14 (2014)
   PUBMED   25035322
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6386251)
  AUTHORS   Dyer,D., Day,M., Ibrahim,M. and Bulla,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JUN-2014) Microbiology and Immunology, University of
            Oklahoma Health Sciences Center, 975 NE 10th Street, Oklahoma City,
            OK 73104, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JMHW00000000.1.
            The Bacillus thuringiensis serovar kurstaki str. HD-1 whole genome
            shotgun (WGS) project has the project accession NZ_JMHW00000000.
            This version of the project (01) has the accession number
            NZ_JMHW01000000, and consists of sequences
            JMHW01000001-JMHW01000193.
            Bacteria available from Bacillus Genome Stock Center, BCGS No. 4D1.
            Source DNA available from Lee Bulla, Dept of Microbiology and
            Immunology, University of Oklahoma Health Sciences Center.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-MAR-2014
            Assembly Method       :: A5 Assembler v. 2014-03-10
            Assembly Name         :: BTK A5
            Genome Coverage       :: 880x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000710255.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:58:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,817
            CDSs (total)                      :: 6,697
            Genes (coding)                    :: 6,264
            CDSs (with protein)               :: 6,264
            Genes (RNA)                       :: 120
            rRNAs                             :: 10, 12, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 10, 1 (5S, 16S)
            partial rRNAs                     :: 11, 9 (16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 433
            CDSs (without protein)            :: 433
            Pseudo Genes (ambiguous residues) :: 0 of 433
            Pseudo Genes (frameshifted)       :: 95 of 433
            Pseudo Genes (incomplete)         :: 357 of 433
            Pseudo Genes (internal stop)      :: 59 of 433
            Pseudo Genes (multiple problems)  :: 63 of 433
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6386251
                     /organism="Bacillus thuringiensis serovar kurstaki str.
                     HD-1"
                     /mol_type="genomic DNA"
                     /strain="HD-1"
                     /serovar="kurstaki"
                     /host="Pectinophora gossypiella"
                     /db_xref="taxon:1261129"
                     /geo_loc_name="USA"
                     /collection_date="1970"
WGS         JMHW01000001-JMHW01000193
WGS_SCAFLD  NZ_JMHW01000001-NZ_JMHW01000193
//
LOCUS       NZ_NUAK01000000      5395071 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus wiedmannii strain AFS027918, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NUAK00000000
VERSION     NZ_NUAK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07597612
            Assembly: GCF_002556745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus wiedmannii
  ORGANISM  Bacillus wiedmannii
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 5395071)
  AUTHORS   Bleich,R.M., Kirk,G.J., Santa Maria,K.C., Allen,S.E., Farag,S.,
            Shank,E.A. and Bowers,A.
  CONSRTM   Agbiome Team Llc
  TITLE     Large-scale bioinformatics analysis of Bacillus genomes uncovers
            conserved roles of natural products in bacterial physiology
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5395071)
  AUTHORS   Bleich,R.M., Kirk,G.J., Santa Maria,K.C., Allen,S.E., Farag,S.,
            Shank,E.A. and Bowers,A.
  CONSRTM   Agbiome Team Llc
  TITLE     Direct Submission
  JOURNAL   Submitted (01-SEP-2017) Chemical Biology and Medicinal Chemistry,
            UNC Chapel Hill, 125 Mason Farm Rd., Chapel Hill, NC 17599, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NUAK00000000.1.
            The Bacillus wiedmannii whole genome shotgun (WGS) project has the
            project accession NZ_NUAK00000000.  This version of the project
            (01) has the accession number NZ_NUAK01000000, and consists of
            sequences NUAK01000001-NUAK01000090.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC Assembly Cell v. 4.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 46.02x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002556745.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:14:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,632
            CDSs (total)                      :: 5,548
            Genes (coding)                    :: 5,351
            CDSs (with protein)               :: 5,351
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 197
            CDSs (without protein)            :: 197
            Pseudo Genes (ambiguous residues) :: 0 of 197
            Pseudo Genes (frameshifted)       :: 62 of 197
            Pseudo Genes (incomplete)         :: 135 of 197
            Pseudo Genes (internal stop)      :: 37 of 197
            Pseudo Genes (multiple problems)  :: 34 of 197
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5395071
                     /organism="Bacillus wiedmannii"
                     /mol_type="genomic DNA"
                     /strain="AFS027918"
                     /isolation_source="core"
                     /host="Soybean"
                     /db_xref="taxon:1890302"
                     /geo_loc_name="USA: IA"
                     /collection_date="2014-05-08"
                     /collected_by="AgBiome"
WGS         NUAK01000001-NUAK01000090
WGS_SCAFLD  NZ_NUAK01000001-NZ_NUAK01000090
//
LOCUS       NZ_LOMW01000000      5725783 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus cereus strain FSL K6-0043, whole genome shotgun sequencing
            project.
ACCESSION   NZ_LOMW00000000
VERSION     NZ_LOMW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03800018
            Assembly: GCF_001583685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus cereus
  ORGANISM  Bacillus cereus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 5725783)
  AUTHORS   Kovac,J.
  TITLE     Bacillus cereus Group isolate
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5725783)
  AUTHORS   Kovac,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-DEC-2015) Department of Food Science, Cornell
            University, 347 Stocking Hall, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LOMW00000000.1.
            The Bacillus cereus whole genome shotgun (WGS) project has the
            project accession NZ_LOMW00000000.  This version of the project
            (01) has the accession number NZ_LOMW01000000, and consists of
            sequences LOMW01000001-LOMW01000087.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2015
            Assembly Method        :: SPAdes v. 3.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 65.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001583685.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:04:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,794
            CDSs (total)                      :: 5,716
            Genes (coding)                    :: 5,541
            CDSs (with protein)               :: 5,541
            Genes (RNA)                       :: 78
            rRNAs                             :: 3, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 67
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 176
            CDSs (without protein)            :: 175
            Pseudo Genes (ambiguous residues) :: 0 of 176
            Pseudo Genes (frameshifted)       :: 74 of 176
            Pseudo Genes (incomplete)         :: 113 of 176
            Pseudo Genes (internal stop)      :: 35 of 176
            Pseudo Genes (multiple problems)  :: 37 of 176
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5725783
                     /organism="Bacillus cereus"
                     /mol_type="genomic DNA"
                     /strain="FSL K6-0043"
                     /isolation_source="Laboratory Heat Treated Raw Milk"
                     /db_xref="taxon:1396"
                     /geo_loc_name="USA: New York"
                     /collection_date="2012-04-18"
                     /collected_by="Cornell University"
WGS         LOMW01000001-LOMW01000087
WGS_SCAFLD  NZ_LOMW01000001-NZ_LOMW01000087
//
LOCUS       NZ_SHSI01000000      2324808 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium longum subsp. longum strain MCC10089, whole genome
            shotgun sequencing project.
ACCESSION   NZ_SHSI00000000
VERSION     NZ_SHSI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06368643
            Assembly: GCF_004333065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium longum subsp. longum
  ORGANISM  Bifidobacterium longum subsp. longum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2324808)
  AUTHORS   Odamaki,T., Bottacini,F., Kato,K., Mitsuyama,E., Yoshida,K.,
            Horigome,A., Xiao,J.Z. and van Sinderen,D.
  TITLE     Genomic diversity and distribution of Bifidobacterium longum subsp.
            longum across the human lifespan
  JOURNAL   Sci Rep 8 (1), 85 (2018)
   PUBMED   29311585
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2324808)
  AUTHORS   Odamaki,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-FEB-2019) Next Generation Science Institute, Morinaga
            Milk Industry, Higashihara 5-Chome, 1-83, Zama 2528583, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SHSI00000000.1.
            The Bifidobacterium longum subsp. longum whole genome shotgun (WGS)
            project has the project accession NZ_SHSI00000000.  This version of
            the project (01) has the accession number NZ_SHSI01000000, and
            consists of sequences SHSI01000001-SHSI01000041.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 181.3x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004333065.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:24:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,971
            CDSs (total)                      :: 1,908
            Genes (coding)                    :: 1,859
            CDSs (with protein)               :: 1,859
            Genes (RNA)                       :: 63
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 14 of 49
            Pseudo Genes (incomplete)         :: 38 of 49
            Pseudo Genes (internal stop)      :: 2 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2324808
                     /organism="Bifidobacterium longum subsp. longum"
                     /mol_type="genomic DNA"
                     /strain="MCC10089"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /sub_species="longum"
                     /db_xref="taxon:1679"
                     /geo_loc_name="Japan"
                     /collection_date="2015"
WGS         SHSI01000001-SHSI01000041
WGS_SCAFLD  NZ_SHSI01000001-NZ_SHSI01000041
//
LOCUS       NZ_SHSS01000000      2340071 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium longum subsp. longum strain MCC10099, whole genome
            shotgun sequencing project.
ACCESSION   NZ_SHSS00000000
VERSION     NZ_SHSS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06368653
            Assembly: GCF_004332745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium longum subsp. longum
  ORGANISM  Bifidobacterium longum subsp. longum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2340071)
  AUTHORS   Odamaki,T., Bottacini,F., Kato,K., Mitsuyama,E., Yoshida,K.,
            Horigome,A., Xiao,J.Z. and van Sinderen,D.
  TITLE     Genomic diversity and distribution of Bifidobacterium longum subsp.
            longum across the human lifespan
  JOURNAL   Sci Rep 8 (1), 85 (2018)
   PUBMED   29311585
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2340071)
  AUTHORS   Odamaki,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-FEB-2019) Next Generation Science Institute, Morinaga
            Milk Industry, Higashihara 5-Chome, 1-83, Zama 2528583, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SHSS00000000.1.
            The Bifidobacterium longum subsp. longum whole genome shotgun (WGS)
            project has the project accession NZ_SHSS00000000.  This version of
            the project (01) has the accession number NZ_SHSS01000000, and
            consists of sequences SHSS01000001-SHSS01000066.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 45.3x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004332745.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:24:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,000
            CDSs (total)                      :: 1,936
            Genes (coding)                    :: 1,889
            CDSs (with protein)               :: 1,889
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 57
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 47
            CDSs (without protein)            :: 47
            Pseudo Genes (ambiguous residues) :: 0 of 47
            Pseudo Genes (frameshifted)       :: 11 of 47
            Pseudo Genes (incomplete)         :: 35 of 47
            Pseudo Genes (internal stop)      :: 5 of 47
            Pseudo Genes (multiple problems)  :: 4 of 47
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2340071
                     /organism="Bifidobacterium longum subsp. longum"
                     /mol_type="genomic DNA"
                     /strain="MCC10099"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /sub_species="longum"
                     /db_xref="taxon:1679"
                     /geo_loc_name="Japan"
                     /collection_date="2015"
WGS         SHSS01000001-SHSS01000066
WGS_SCAFLD  NZ_SHSS01000001-NZ_SHSS01000066
//
LOCUS       NZ_SHRO01000000      2394373 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium longum subsp. longum strain MCC10067, whole genome
            shotgun sequencing project.
ACCESSION   NZ_SHRO00000000
VERSION     NZ_SHRO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06368623
            Assembly: GCF_004333375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium longum subsp. longum
  ORGANISM  Bifidobacterium longum subsp. longum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2394373)
  AUTHORS   Odamaki,T., Bottacini,F., Kato,K., Mitsuyama,E., Yoshida,K.,
            Horigome,A., Xiao,J.Z. and van Sinderen,D.
  TITLE     Genomic diversity and distribution of Bifidobacterium longum subsp.
            longum across the human lifespan
  JOURNAL   Sci Rep 8 (1), 85 (2018)
   PUBMED   29311585
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2394373)
  AUTHORS   Odamaki,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-FEB-2019) Next Generation Science Institute, Morinaga
            Milk Industry, Higashihara 5-Chome, 1-83, Zama 2528583, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SHRO00000000.1.
            The Bifidobacterium longum subsp. longum whole genome shotgun (WGS)
            project has the project accession NZ_SHRO00000000.  This version of
            the project (01) has the accession number NZ_SHRO01000000, and
            consists of sequences SHRO01000001-SHRO01000055.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 49.7x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004333375.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:25:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,050
            CDSs (total)                      :: 1,982
            Genes (coding)                    :: 1,934
            CDSs (with protein)               :: 1,934
            Genes (RNA)                       :: 68
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 16 of 48
            Pseudo Genes (incomplete)         :: 30 of 48
            Pseudo Genes (internal stop)      :: 9 of 48
            Pseudo Genes (multiple problems)  :: 6 of 48
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2394373
                     /organism="Bifidobacterium longum subsp. longum"
                     /mol_type="genomic DNA"
                     /strain="MCC10067"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /sub_species="longum"
                     /db_xref="taxon:1679"
                     /geo_loc_name="Japan"
                     /collection_date="2015"
WGS         SHRO01000001-SHRO01000055
WGS_SCAFLD  NZ_SHRO01000001-NZ_SHRO01000055
//
LOCUS       NZ_SHRV01000000      2410008 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium longum subsp. longum strain MCC10074, whole genome
            shotgun sequencing project.
ACCESSION   NZ_SHRV00000000
VERSION     NZ_SHRV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06368630
            Assembly: GCF_004334165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium longum subsp. longum
  ORGANISM  Bifidobacterium longum subsp. longum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2410008)
  AUTHORS   Odamaki,T., Bottacini,F., Kato,K., Mitsuyama,E., Yoshida,K.,
            Horigome,A., Xiao,J.Z. and van Sinderen,D.
  TITLE     Genomic diversity and distribution of Bifidobacterium longum subsp.
            longum across the human lifespan
  JOURNAL   Sci Rep 8 (1), 85 (2018)
   PUBMED   29311585
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2410008)
  AUTHORS   Odamaki,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-FEB-2019) Next Generation Science Institute, Morinaga
            Milk Industry, Higashihara 5-Chome, 1-83, Zama 2528583, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SHRV00000000.1.
            The Bifidobacterium longum subsp. longum whole genome shotgun (WGS)
            project has the project accession NZ_SHRV00000000.  This version of
            the project (01) has the accession number NZ_SHRV01000000, and
            consists of sequences SHRV01000001-SHRV01000034.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 54.2x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004334165.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:27:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,127
            CDSs (total)                      :: 2,040
            Genes (coding)                    :: 1,989
            CDSs (with protein)               :: 1,989
            Genes (RNA)                       :: 87
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 14 of 51
            Pseudo Genes (incomplete)         :: 42 of 51
            Pseudo Genes (internal stop)      :: 3 of 51
            Pseudo Genes (multiple problems)  :: 8 of 51
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2410008
                     /organism="Bifidobacterium longum subsp. longum"
                     /mol_type="genomic DNA"
                     /strain="MCC10074"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /sub_species="longum"
                     /db_xref="taxon:1679"
                     /geo_loc_name="Japan"
                     /collection_date="2015"
WGS         SHRV01000001-SHRV01000034
WGS_SCAFLD  NZ_SHRV01000001-NZ_SHRV01000034
//
LOCUS       NZ_SHTA01000000      2438263 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium longum subsp. longum strain MCC10111, whole genome
            shotgun sequencing project.
ACCESSION   NZ_SHTA00000000
VERSION     NZ_SHTA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06368661
            Assembly: GCF_004332655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium longum subsp. longum
  ORGANISM  Bifidobacterium longum subsp. longum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2438263)
  AUTHORS   Odamaki,T., Bottacini,F., Kato,K., Mitsuyama,E., Yoshida,K.,
            Horigome,A., Xiao,J.Z. and van Sinderen,D.
  TITLE     Genomic diversity and distribution of Bifidobacterium longum subsp.
            longum across the human lifespan
  JOURNAL   Sci Rep 8 (1), 85 (2018)
   PUBMED   29311585
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2438263)
  AUTHORS   Odamaki,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-FEB-2019) Next Generation Science Institute, Morinaga
            Milk Industry, Higashihara 5-Chome, 1-83, Zama 2528583, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SHTA00000000.1.
            The Bifidobacterium longum subsp. longum whole genome shotgun (WGS)
            project has the project accession NZ_SHTA00000000.  This version of
            the project (01) has the accession number NZ_SHTA01000000, and
            consists of sequences SHTA01000001-SHTA01000049.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 60.2x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004332655.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:32:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,145
            CDSs (total)                      :: 2,074
            Genes (coding)                    :: 2,026
            CDSs (with protein)               :: 2,026
            Genes (RNA)                       :: 71
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 13 of 48
            Pseudo Genes (incomplete)         :: 37 of 48
            Pseudo Genes (internal stop)      :: 3 of 48
            Pseudo Genes (multiple problems)  :: 5 of 48
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2438263
                     /organism="Bifidobacterium longum subsp. longum"
                     /mol_type="genomic DNA"
                     /strain="MCC10111"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /sub_species="longum"
                     /db_xref="taxon:1679"
                     /geo_loc_name="Japan"
                     /collection_date="2015"
WGS         SHTA01000001-SHTA01000049
WGS_SCAFLD  NZ_SHTA01000001-NZ_SHTA01000049
//
LOCUS       NZ_FNIT01000000      4590683 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aureimonas jatrophae strain L7-484,KACC 16230,DSM 25025, whole
            genome shotgun sequencing project.
ACCESSION   NZ_FNIT00000000
VERSION     NZ_FNIT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05192530
            Assembly: GCF_900104035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aureimonas jatrophae
  ORGANISM  Aureimonas jatrophae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Aureimonas.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNIT00000000.1.
            The Aureimonas jatrophae whole genome shotgun (WGS) project has the
            project accession NZ_FNIT00000000.  This version of the project
            (01) has the accession number NZ_FNIT01000000, and consists of
            sequences FNIT01000001-FNIT01000025.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900104035.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:08:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,372
            CDSs (total)                      :: 4,318
            Genes (coding)                    :: 4,279
            CDSs (with protein)               :: 4,279
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 4 (16S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 9 of 39
            Pseudo Genes (incomplete)         :: 31 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 8 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4590683
                     /organism="Aureimonas jatrophae"
                     /mol_type="genomic DNA"
                     /strain="L7-484,KACC 16230,DSM 25025"
                     /db_xref="taxon:1166073"
WGS         FNIT01000001-FNIT01000025
WGS_SCAFLD  NZ_FNIT01000001-NZ_FNIT01000025
//
LOCUS       NZ_SHQR01000000      2449960 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium longum subsp. longum strain MCC10040, whole genome
            shotgun sequencing project.
ACCESSION   NZ_SHQR00000000
VERSION     NZ_SHQR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06368600
            Assembly: GCF_004334345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium longum subsp. longum
  ORGANISM  Bifidobacterium longum subsp. longum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2449960)
  AUTHORS   Odamaki,T., Bottacini,F., Kato,K., Mitsuyama,E., Yoshida,K.,
            Horigome,A., Xiao,J.Z. and van Sinderen,D.
  TITLE     Genomic diversity and distribution of Bifidobacterium longum subsp.
            longum across the human lifespan
  JOURNAL   Sci Rep 8 (1), 85 (2018)
   PUBMED   29311585
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2449960)
  AUTHORS   Odamaki,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2019) Next Generation Science Institute, Morinaga
            Milk Industry, Higashihara 5-Chome, 1-83, Zama 2528583, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SHQR00000000.1.
            The Bifidobacterium longum subsp. longum whole genome shotgun (WGS)
            project has the project accession NZ_SHQR00000000.  This version of
            the project (01) has the accession number NZ_SHQR01000000, and
            consists of sequences SHQR01000001-SHQR01000045.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 51.7x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004334345.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:36:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,131
            CDSs (total)                      :: 2,066
            Genes (coding)                    :: 2,019
            CDSs (with protein)               :: 2,019
            Genes (RNA)                       :: 65
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 58
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 47
            CDSs (without protein)            :: 47
            Pseudo Genes (ambiguous residues) :: 0 of 47
            Pseudo Genes (frameshifted)       :: 14 of 47
            Pseudo Genes (incomplete)         :: 38 of 47
            Pseudo Genes (internal stop)      :: 5 of 47
            Pseudo Genes (multiple problems)  :: 10 of 47
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2449960
                     /organism="Bifidobacterium longum subsp. longum"
                     /mol_type="genomic DNA"
                     /strain="MCC10040"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /sub_species="longum"
                     /db_xref="taxon:1679"
                     /geo_loc_name="Japan"
                     /collection_date="2015"
WGS         SHQR01000001-SHQR01000045
WGS_SCAFLD  NZ_SHQR01000001-NZ_SHQR01000045
//
LOCUS       NZ_FNTV01000000      4622641 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Arthrobacter alpinus strain DSM 22274, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNTV00000000
VERSION     NZ_FNTV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04489740
            Assembly: GCF_900105965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Arthrobacter alpinus
  ORGANISM  Arthrobacter alpinus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNTV00000000.1.
            The Arthrobacter alpinus whole genome shotgun (WGS) project has the
            project accession NZ_FNTV00000000.  This version of the project
            (01) has the accession number NZ_FNTV01000000, and consists of
            sequences FNTV01000001-FNTV01000002.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900105965.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:08:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,311
            CDSs (total)                      :: 4,237
            Genes (coding)                    :: 4,168
            CDSs (with protein)               :: 4,168
            Genes (RNA)                       :: 74
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 37 of 69
            Pseudo Genes (incomplete)         :: 31 of 69
            Pseudo Genes (internal stop)      :: 7 of 69
            Pseudo Genes (multiple problems)  :: 5 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4622641
                     /organism="Arthrobacter alpinus"
                     /mol_type="genomic DNA"
                     /strain="DSM 22274"
                     /type_material="type strain of Arthrobacter alpinus"
                     /db_xref="taxon:656366"
WGS         FNTV01000001-FNTV01000002
WGS_SCAFLD  NZ_FNTV01000001-NZ_FNTV01000002
//
LOCUS       NZ_WQQF01000000      2438932 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium longum strain MCC265, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WQQF00000000
VERSION     NZ_WQQF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12147361
            Assembly: GCF_018785685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium longum
  ORGANISM  Bifidobacterium longum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2438932)
  AUTHORS   Perez,M., Ntemiri,A., Tan,H., Harris,H.M.B., Roager,H.M.,
            Ribiere,C. and O'Toole,P.W.
  TITLE     A synthetic consortium of 100 gut commensals modulates the
            composition and function in a colon model of the microbiome of
            elderly subjects
  JOURNAL   Gut Microbes 13 (1), 1-19 (2021)
   PUBMED   33993839
REFERENCE   2  (bases 1 to 2438932)
  AUTHORS   Harris,H.M.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2019) Microbiology Department, University College
            Cork, Western road, Cork, Cork 0000, Ireland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WQQF00000000.1.
            The Bifidobacterium longum whole genome shotgun (WGS) project has
            the project accession NZ_WQQF00000000.  This version of the project
            (01) has the accession number NZ_WQQF01000000, and consists of
            sequences WQQF01000001-WQQF01000043.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 239.372x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_018785685.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:09:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,149
            CDSs (total)                      :: 2,065
            Genes (coding)                    :: 2,017
            CDSs (with protein)               :: 2,017
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 13 of 48
            Pseudo Genes (incomplete)         :: 41 of 48
            Pseudo Genes (internal stop)      :: 4 of 48
            Pseudo Genes (multiple problems)  :: 10 of 48
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2438932
                     /organism="Bifidobacterium longum"
                     /mol_type="genomic DNA"
                     /strain="MCC265"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:216816"
                     /geo_loc_name="Ireland"
                     /lat_lon="51.8985 N 8.4756 W"
WGS         WQQF01000001-WQQF01000043
WGS_SCAFLD  NZ_WQQF01000001-NZ_WQQF01000043
//
LOCUS       NZ_JWST01000000      6361367 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus thuringiensis strain AK47, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JWST00000000
VERSION     NZ_JWST00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03271686
            Assembly: GCF_000816555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 6361367)
  AUTHORS   Saxena,A.K., Gaur,P., Gaba,S., Singh,R.N., Yadav,A.N. and
            Kaushik,R.
  TITLE     Draft Genome sequence of a novel strain of Bacillus thuringensis AK
            47
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6361367)
  AUTHORS   Saxena,A.K., Gaur,P., Gaba,S., Singh,R.N., Yadav,A.N. and
            Kaushik,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JAN-2015) Microbiology, Indian Agricultural Research
            Institute, PUSA Road, New Delhi, Delhi 110012, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWST00000000.1.
            The Bacillus thuringiensis whole genome shotgun (WGS) project has
            the project accession NZ_JWST00000000.  This version of the project
            (01) has the accession number NZ_JWST01000000, and consists of
            sequences JWST01000001-JWST01000052.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: A5 PIPELINE v. OCT-2014
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000816555.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:11:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,727
            CDSs (total)                      :: 6,602
            Genes (coding)                    :: 6,152
            CDSs (with protein)               :: 6,152
            Genes (RNA)                       :: 125
            rRNAs                             :: 12, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 12, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 103
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 450
            CDSs (without protein)            :: 450
            Pseudo Genes (ambiguous residues) :: 0 of 450
            Pseudo Genes (frameshifted)       :: 109 of 450
            Pseudo Genes (incomplete)         :: 362 of 450
            Pseudo Genes (internal stop)      :: 61 of 450
            Pseudo Genes (multiple problems)  :: 67 of 450
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6361367
                     /organism="Bacillus thuringiensis"
                     /mol_type="genomic DNA"
                     /strain="AK47"
                     /isolation_source="Soil"
                     /db_xref="taxon:1428"
                     /geo_loc_name="India: Odisha"
                     /lat_lon="20.4 N 86.45 E"
                     /collection_date="2010-08-18"
WGS         JWST01000001-JWST01000052
WGS_SCAFLD  NZ_JWST01000001-NZ_JWST01000052
//
LOCUS       NZ_JAIZGU010000000   2175837 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium pseudocatenulatum strain 2235B, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JAIZGU000000000
VERSION     NZ_JAIZGU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN22060764
            Assembly: GCF_022496355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium pseudocatenulatum
  ORGANISM  Bifidobacterium pseudocatenulatum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2175837)
  AUTHORS   Alessandri,G., Lugli,G.A., Milani,C., Turroni,F. and Ventura,M.
  TITLE     Disclosing the genomic diversity among members of the
            Bifidobacterium genus of human and pet origin
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2175837)
  AUTHORS   Alessandri,G., Lugli,G.A., Milani,C., Turroni,F. and Ventura,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-OCT-2021) Department of Chemistry, Life Sciences and
            Environmental Sustainability, University of Parma, Via Parco Area
            delle Scienze 11/A, Parma, Parma 43124, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIZGU000000000.1.
            The Bifidobacterium pseudocatenulatum whole genome shotgun (WGS)
            project has the project accession NZ_JAIZGU000000000.  This version
            of the project (01) has the accession number NZ_JAIZGU010000000,
            and consists of sequences JAIZGU010000001-JAIZGU010000009.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 116x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022496355.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:14:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,791
            CDSs (total)                      :: 1,727
            Genes (coding)                    :: 1,669
            CDSs (with protein)               :: 1,669
            Genes (RNA)                       :: 64
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 58
            CDSs (without protein)            :: 58
            Pseudo Genes (ambiguous residues) :: 0 of 58
            Pseudo Genes (frameshifted)       :: 17 of 58
            Pseudo Genes (incomplete)         :: 45 of 58
            Pseudo Genes (internal stop)      :: 5 of 58
            Pseudo Genes (multiple problems)  :: 9 of 58
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2175837
                     /organism="Bifidobacterium pseudocatenulatum"
                     /mol_type="genomic DNA"
                     /strain="2235B"
                     /isolation_source="Fecal sample"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:28026"
                     /geo_loc_name="Italy"
                     /collection_date="2020-10-30"
WGS         JAIZGU010000001-JAIZGU010000009
WGS_SCAFLD  NZ_JAIZGU010000001-NZ_JAIZGU010000009
//
LOCUS       NZ_JAKEZC010000000   2227001 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium bifidum strain LH_1016, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAKEZC000000000
VERSION     NZ_JAKEZC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN24838603
            Assembly: GCF_029723595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium bifidum
  ORGANISM  Bifidobacterium bifidum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2227001)
  AUTHORS   Javvadi,S.G., Kujawska,M., Papp,D., Gontarczyk,A.M., Jordan,A.,
            Lawson,M.A., O'Neill,I.J., Alcon-Giner,C., Kiu,R., Clarke,P.,
            Beraza,N. and Hall,L.J.
  TITLE     A novel bacteriocin produced by Bifidobacterium longum subsp.
            infantis has dual antimicrobial and immunomodulatory activity
  JOURNAL   bioRxiv (2022) In press
  REMARK    DOI: 10.1101/2022.01.27.477972
REFERENCE   2  (bases 1 to 2227001)
  AUTHORS   Kiu,R. and Hall,L.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-JAN-2022) Gut Microbes & Health, Quadram Institute
            Bioscience, Rosalind Franklin Road, Norwich, Norfolk NR4 7UQ,
            United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKEZC000000000.1.
            The Bifidobacterium bifidum whole genome shotgun (WGS) project has
            the project accession NZ_JAKEZC000000000.  This version of the
            project (01) has the accession number NZ_JAKEZC010000000, and
            consists of sequences JAKEZC010000001-JAKEZC010000037.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: SPAdes v. 3.11
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 78x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029723595.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:42:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,911
            CDSs (total)                      :: 1,848
            Genes (coding)                    :: 1,767
            CDSs (with protein)               :: 1,767
            Genes (RNA)                       :: 63
            rRNAs                             :: 3, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 1 (5S, 16S)
            tRNAs                             :: 54
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 31 of 81
            Pseudo Genes (incomplete)         :: 61 of 81
            Pseudo Genes (internal stop)      :: 8 of 81
            Pseudo Genes (multiple problems)  :: 18 of 81
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2227001
                     /organism="Bifidobacterium bifidum"
                     /mol_type="genomic DNA"
                     /strain="LH_1016"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1681"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2017"
WGS         JAKEZC010000001-JAKEZC010000037
WGS_SCAFLD  NZ_JAKEZC010000001-NZ_JAKEZC010000037
//
LOCUS       NZ_FMTP01000000      4505084 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Ancylobacter rudongensis strain CGMCC 1.1761, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FMTP00000000
VERSION     NZ_FMTP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05660859
            Assembly: GCF_900100155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ancylobacter rudongensis
  ORGANISM  Ancylobacter rudongensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Xanthobacteraceae; Ancylobacter.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FMTP00000000.1.
            The Ancylobacter rudongensis whole genome shotgun (WGS) project has
            the project accession NZ_FMTP00000000.  This version of the project
            (01) has the accession number NZ_FMTP01000000, and consists of
            sequences FMTP01000001-FMTP01000018.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900100155.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:18:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,212
            CDSs (total)                      :: 4,159
            Genes (coding)                    :: 4,120
            CDSs (with protein)               :: 4,120
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 12 of 39
            Pseudo Genes (incomplete)         :: 33 of 39
            Pseudo Genes (internal stop)      :: 2 of 39
            Pseudo Genes (multiple problems)  :: 8 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4505084
                     /organism="Ancylobacter rudongensis"
                     /mol_type="genomic DNA"
                     /strain="CGMCC 1.1761"
                     /type_material="type strain of Ancylobacter rudongensis"
                     /db_xref="taxon:177413"
WGS         FMTP01000001-FMTP01000018
WGS_SCAFLD  NZ_FMTP01000001-NZ_FMTP01000018
//
LOCUS       NZ_JARJNH010000000   2306265 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium longum strain RC9_19002_UC, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JARJNH000000000
VERSION     NZ_JARJNH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32756513
            Assembly: GCF_029340125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium longum
  ORGANISM  Bifidobacterium longum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2306265)
  AUTHORS   Jacobson,N.E., Souza,C.E., An,M.A., Vega,A., Rosales,M.E.,
            Droit,L., Mihindukulasuriya,K., Handley,S., Parkes,M., Rimmer,J.,
            Wang,D., Edwards,R.A. and Segall,A.M.
  TITLE     Draft genomes of 12 Bifidobacterium isolates from human IBD fecal
            samples
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2306265)
  AUTHORS   Jacobson,N.E., Souza,C.E., Mihindukulasuriya,K., Handley,S. and
            Segall,A.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-MAR-2023) Biology, San Diego State University, 5500
            Campanile Drive, San Diego, CA 92182-7426, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARJNH000000000.1.
            The Bifidobacterium longum whole genome shotgun (WGS) project has
            the project accession NZ_JARJNH000000000.  This version of the
            project (01) has the accession number NZ_JARJNH010000000, and
            consists of sequences JARJNH010000001-JARJNH010000050.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 2022
            Assembly Name          :: RC9_19002_UC
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 250.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029340125.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:36:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,021
            CDSs (total)                      :: 1,959
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 47
            CDSs (without protein)            :: 47
            Pseudo Genes (ambiguous residues) :: 0 of 47
            Pseudo Genes (frameshifted)       :: 13 of 47
            Pseudo Genes (incomplete)         :: 36 of 47
            Pseudo Genes (internal stop)      :: 3 of 47
            Pseudo Genes (multiple problems)  :: 5 of 47
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2306265
                     /organism="Bifidobacterium longum"
                     /mol_type="genomic DNA"
                     /strain="RC9_19002_UC"
                     /isolation_source="UC fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:216816"
                     /geo_loc_name="United Kingdom: Addenbrooke's hospital"
                     /lat_lon="52.17 N 0.14 E"
                     /collection_date="2016-07"
WGS         JARJNH010000001-JARJNH010000050
WGS_SCAFLD  NZ_JARJNH010000001-NZ_JARJNH010000050
//
LOCUS       NZ_JAKEYZ010000000   2224989 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium bifidum strain LH_1036, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAKEYZ000000000
VERSION     NZ_JAKEYZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN24838606
            Assembly: GCF_029723555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium bifidum
  ORGANISM  Bifidobacterium bifidum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2224989)
  AUTHORS   Javvadi,S.G., Kujawska,M., Papp,D., Gontarczyk,A.M., Jordan,A.,
            Lawson,M.A., O'Neill,I.J., Alcon-Giner,C., Kiu,R., Clarke,P.,
            Beraza,N. and Hall,L.J.
  TITLE     A novel bacteriocin produced by Bifidobacterium longum subsp.
            infantis has dual antimicrobial and immunomodulatory activity
  JOURNAL   bioRxiv (2022) In press
  REMARK    DOI: 10.1101/2022.01.27.477972
REFERENCE   2  (bases 1 to 2224989)
  AUTHORS   Kiu,R. and Hall,L.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-JAN-2022) Gut Microbes & Health, Quadram Institute
            Bioscience, Rosalind Franklin Road, Norwich, Norfolk NR4 7UQ,
            United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKEYZ000000000.1.
            The Bifidobacterium bifidum whole genome shotgun (WGS) project has
            the project accession NZ_JAKEYZ000000000.  This version of the
            project (01) has the accession number NZ_JAKEYZ010000000, and
            consists of sequences JAKEYZ010000001-JAKEYZ010000033.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: SPAdes v. 3.11
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 54x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029723555.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:45:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,901
            CDSs (total)                      :: 1,837
            Genes (coding)                    :: 1,759
            CDSs (with protein)               :: 1,759
            Genes (RNA)                       :: 64
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 2 (5S, 16S)
            tRNAs                             :: 54
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 30 of 78
            Pseudo Genes (incomplete)         :: 60 of 78
            Pseudo Genes (internal stop)      :: 6 of 78
            Pseudo Genes (multiple problems)  :: 17 of 78
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2224989
                     /organism="Bifidobacterium bifidum"
                     /mol_type="genomic DNA"
                     /strain="LH_1036"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1681"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2017"
WGS         JAKEYZ010000001-JAKEYZ010000033
WGS_SCAFLD  NZ_JAKEYZ010000001-NZ_JAKEYZ010000033
//
LOCUS       NZ_JAKEZH010000000   2225294 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium bifidum strain LH_986, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAKEZH000000000
VERSION     NZ_JAKEZH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN24838598
            Assembly: GCF_029723695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium bifidum
  ORGANISM  Bifidobacterium bifidum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2225294)
  AUTHORS   Javvadi,S.G., Kujawska,M., Papp,D., Gontarczyk,A.M., Jordan,A.,
            Lawson,M.A., O'Neill,I.J., Alcon-Giner,C., Kiu,R., Clarke,P.,
            Beraza,N. and Hall,L.J.
  TITLE     A novel bacteriocin produced by Bifidobacterium longum subsp.
            infantis has dual antimicrobial and immunomodulatory activity
  JOURNAL   bioRxiv (2022) In press
  REMARK    DOI: 10.1101/2022.01.27.477972
REFERENCE   2  (bases 1 to 2225294)
  AUTHORS   Kiu,R. and Hall,L.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-JAN-2022) Gut Microbes & Health, Quadram Institute
            Bioscience, Rosalind Franklin Road, Norwich, Norfolk NR4 7UQ,
            United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKEZH000000000.1.
            The Bifidobacterium bifidum whole genome shotgun (WGS) project has
            the project accession NZ_JAKEZH000000000.  This version of the
            project (01) has the accession number NZ_JAKEZH010000000, and
            consists of sequences JAKEZH010000001-JAKEZH010000035.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: SPAdes v. 3.11
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 56x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029723695.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:45:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,916
            CDSs (total)                      :: 1,852
            Genes (coding)                    :: 1,773
            CDSs (with protein)               :: 1,773
            Genes (RNA)                       :: 64
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 2 (5S, 16S)
            tRNAs                             :: 54
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 30 of 79
            Pseudo Genes (incomplete)         :: 60 of 79
            Pseudo Genes (internal stop)      :: 6 of 79
            Pseudo Genes (multiple problems)  :: 16 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2225294
                     /organism="Bifidobacterium bifidum"
                     /mol_type="genomic DNA"
                     /strain="LH_986"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1681"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2017"
WGS         JAKEZH010000001-JAKEZH010000035
WGS_SCAFLD  NZ_JAKEZH010000001-NZ_JAKEZH010000035
//
LOCUS       NZ_JAQSIW010000000   3260543 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella abortus strain 82, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAQSIW000000000
VERSION     NZ_JAQSIW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN33208915
            Assembly: GCF_029324945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella abortus (Brucella melitensis biovar Abortus)
  ORGANISM  Brucella abortus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3260543)
  AUTHORS   Prasolova,O., Krylova,E., Bogomazova,A., Soltynskaya,I.,
            Sklyarov,O., Gordeeva,V., Timofeeva,I., Motorygin,A. and Panin,A.
  TITLE     The Russian collection of Brucella abortus vaccine strains: short
            description, implementation and genomic analysis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3260543)
  AUTHORS   Krylova,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) Molecular Biology, Rosselkhoznadzor the
            Russian State Center for Animal Feed and Drug Standardization and
            Quality, 5 Zvenigorodskoye Shosse, Moscow 123022, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAQSIW000000000.1.
            The Brucella abortus whole genome shotgun (WGS) project has the
            project accession NZ_JAQSIW000000000.  This version of the project
            (01) has the accession number NZ_JAQSIW010000000, and consists of
            sequences JAQSIW010000001-JAQSIW010000021.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 89x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029324945.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:49:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,216
            CDSs (total)                      :: 3,158
            Genes (coding)                    :: 2,979
            CDSs (with protein)               :: 2,979
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 179
            CDSs (without protein)            :: 179
            Pseudo Genes (ambiguous residues) :: 0 of 179
            Pseudo Genes (frameshifted)       :: 126 of 179
            Pseudo Genes (incomplete)         :: 42 of 179
            Pseudo Genes (internal stop)      :: 33 of 179
            Pseudo Genes (multiple problems)  :: 20 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3260543
                     /organism="Brucella abortus"
                     /mol_type="genomic DNA"
                     /strain="82"
                     /isolation_source="aborted fetus"
                     /host="cow"
                     /db_xref="taxon:235"
                     /geo_loc_name="Russia"
                     /collection_date="1960"
WGS         JAQSIW010000001-JAQSIW010000021
WGS_SCAFLD  NZ_JAQSIW010000001-NZ_JAQSIW010000021
//
LOCUS       NZ_FOAB01000000      5307707 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aquimarina amphilecti strain DSM 25232, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOAB00000000
VERSION     NZ_FOAB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04487910
            Assembly: GCF_900109375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aquimarina amphilecti
  ORGANISM  Aquimarina amphilecti
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Aquimarina.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOAB00000000.1.
            The Aquimarina amphilecti whole genome shotgun (WGS) project has
            the project accession NZ_FOAB00000000.  This version of the project
            (01) has the accession number NZ_FOAB01000000, and consists of
            sequences FOAB01000001-FOAB01000016.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900109375.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:21:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,693
            CDSs (total)                      :: 4,630
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 63
            rRNAs                             :: 4, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 4 of 12
            Pseudo Genes (incomplete)         :: 8 of 12
            Pseudo Genes (internal stop)      :: 3 of 12
            Pseudo Genes (multiple problems)  :: 3 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5307707
                     /organism="Aquimarina amphilecti"
                     /mol_type="genomic DNA"
                     /strain="DSM 25232"
                     /type_material="type strain of Aquimarina amphilecti"
                     /db_xref="taxon:1038014"
WGS         FOAB01000001-FOAB01000016
WGS_SCAFLD  NZ_FOAB01000001-NZ_FOAB01000016
//
LOCUS       NZ_JAQSJB010000000   3263681 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella abortus strain KV 13/100, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAQSJB000000000
VERSION     NZ_JAQSJB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN33208920
            Assembly: GCF_029324865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella abortus (Brucella melitensis biovar Abortus)
  ORGANISM  Brucella abortus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3263681)
  AUTHORS   Prasolova,O., Krylova,E., Bogomazova,A., Soltynskaya,I.,
            Sklyarov,O., Gordeeva,V., Timofeeva,I., Motorygin,A. and Panin,A.
  TITLE     The Russian collection of Brucella abortus vaccine strains: short
            description, implementation and genomic analysis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3263681)
  AUTHORS   Krylova,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) Molecular Biology, Rosselkhoznadzor the
            Russian State Center for Animal Feed and Drug Standardization and
            Quality, 5 Zvenigorodskoye Shosse, Moscow 123022, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAQSJB000000000.1.
            The Brucella abortus whole genome shotgun (WGS) project has the
            project accession NZ_JAQSJB000000000.  This version of the project
            (01) has the accession number NZ_JAQSJB010000000, and consists of
            sequences JAQSJB010000001-JAQSJB010000023.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 162x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029324865.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:48:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,216
            CDSs (total)                      :: 3,158
            Genes (coding)                    :: 2,967
            CDSs (with protein)               :: 2,967
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 191
            CDSs (without protein)            :: 191
            Pseudo Genes (ambiguous residues) :: 0 of 191
            Pseudo Genes (frameshifted)       :: 129 of 191
            Pseudo Genes (incomplete)         :: 49 of 191
            Pseudo Genes (internal stop)      :: 36 of 191
            Pseudo Genes (multiple problems)  :: 21 of 191
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3263681
                     /organism="Brucella abortus"
                     /mol_type="genomic DNA"
                     /strain="KV 13/100"
                     /host="cow"
                     /db_xref="taxon:235"
                     /geo_loc_name="Russia"
                     /collection_date="1989"
WGS         JAQSJB010000001-JAQSJB010000023
WGS_SCAFLD  NZ_JAQSJB010000001-NZ_JAQSJB010000023
//
LOCUS       NZ_JARJNO010000000   1843131 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium animalis strain RC150_19034_HHC, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JARJNO000000000
VERSION     NZ_JARJNO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32756520
            Assembly: GCF_029340165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium animalis (Bifidobacterium lactis)
  ORGANISM  Bifidobacterium animalis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 1843131)
  AUTHORS   Jacobson,N.E., Souza,C.E., An,M.A., Vega,A., Rosales,M.E.,
            Droit,L., Mihindukulasuriya,K., Handley,S., Parkes,M., Rimmer,J.,
            Wang,D., Edwards,R.A. and Segall,A.M.
  TITLE     Draft genomes of 12 Bifidobacterium isolates from human IBD fecal
            samples
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1843131)
  AUTHORS   Jacobson,N.E., Souza,C.E., Mihindukulasuriya,K., Handley,S. and
            Segall,A.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-MAR-2023) Biology, San Diego State University, 5500
            Campanile Drive, San Diego, CA 92182-7426, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARJNO000000000.1.
            The Bifidobacterium animalis whole genome shotgun (WGS) project has
            the project accession NZ_JARJNO000000000.  This version of the
            project (01) has the accession number NZ_JARJNO010000000, and
            consists of sequences JARJNO010000001-JARJNO010000077.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 2022
            Assembly Name          :: RC150_19034_HHC
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 323.6x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029340165.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:44:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,565
            CDSs (total)                      :: 1,507
            Genes (coding)                    :: 1,488
            CDSs (with protein)               :: 1,488
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 52
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 19
            CDSs (without protein)            :: 19
            Pseudo Genes (ambiguous residues) :: 0 of 19
            Pseudo Genes (frameshifted)       :: 4 of 19
            Pseudo Genes (incomplete)         :: 15 of 19
            Pseudo Genes (internal stop)      :: 1 of 19
            Pseudo Genes (multiple problems)  :: 1 of 19
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843131
                     /organism="Bifidobacterium animalis"
                     /mol_type="genomic DNA"
                     /strain="RC150_19034_HHC"
                     /isolation_source="HHC fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:28025"
                     /geo_loc_name="United Kingdom: Addenbrooke's hospital"
                     /lat_lon="52.17 N 0.14 E"
                     /collection_date="2016-08"
WGS         JARJNO010000001-JARJNO010000077
WGS_SCAFLD  NZ_JARJNO010000001-NZ_JARJNO010000077
//
LOCUS       NZ_JAKEZB010000000   2229202 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium bifidum strain LH_1017, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAKEZB000000000
VERSION     NZ_JAKEZB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN24838604
            Assembly: GCF_029723565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium bifidum
  ORGANISM  Bifidobacterium bifidum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2229202)
  AUTHORS   Javvadi,S.G., Kujawska,M., Papp,D., Gontarczyk,A.M., Jordan,A.,
            Lawson,M.A., O'Neill,I.J., Alcon-Giner,C., Kiu,R., Clarke,P.,
            Beraza,N. and Hall,L.J.
  TITLE     A novel bacteriocin produced by Bifidobacterium longum subsp.
            infantis has dual antimicrobial and immunomodulatory activity
  JOURNAL   bioRxiv (2022) In press
  REMARK    DOI: 10.1101/2022.01.27.477972
REFERENCE   2  (bases 1 to 2229202)
  AUTHORS   Kiu,R. and Hall,L.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-JAN-2022) Gut Microbes & Health, Quadram Institute
            Bioscience, Rosalind Franklin Road, Norwich, Norfolk NR4 7UQ,
            United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKEZB000000000.1.
            The Bifidobacterium bifidum whole genome shotgun (WGS) project has
            the project accession NZ_JAKEZB000000000.  This version of the
            project (01) has the accession number NZ_JAKEZB010000000, and
            consists of sequences JAKEZB010000001-JAKEZB010000046.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: SPAdes v. 3.11
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 112x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029723565.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:52:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,916
            CDSs (total)                      :: 1,851
            Genes (coding)                    :: 1,770
            CDSs (with protein)               :: 1,770
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 3 (5S, 16S)
            tRNAs                             :: 54
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 30 of 81
            Pseudo Genes (incomplete)         :: 62 of 81
            Pseudo Genes (internal stop)      :: 6 of 81
            Pseudo Genes (multiple problems)  :: 16 of 81
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2229202
                     /organism="Bifidobacterium bifidum"
                     /mol_type="genomic DNA"
                     /strain="LH_1017"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1681"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2017"
WGS         JAKEZB010000001-JAKEZB010000046
WGS_SCAFLD  NZ_JAKEZB010000001-NZ_JAKEZB010000046
//
LOCUS       NZ_FNYQ01000000      5072301 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Azotobacter beijerinckii strain DSM 373, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNYQ00000000
VERSION     NZ_FNYQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04244572
            Assembly: GCF_900108885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Azotobacter beijerinckii
  ORGANISM  Azotobacter beijerinckii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Azotobacter.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNYQ00000000.1.
            The Azotobacter beijerinckii whole genome shotgun (WGS) project has
            the project accession NZ_FNYQ00000000.  This version of the project
            (01) has the accession number NZ_FNYQ01000000, and consists of
            sequences FNYQ01000001-FNYQ01000249.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900108885.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:33:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,036
            CDSs (total)                      :: 4,976
            Genes (coding)                    :: 4,737
            CDSs (with protein)               :: 4,737
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 239
            CDSs (without protein)            :: 239
            Pseudo Genes (ambiguous residues) :: 0 of 239
            Pseudo Genes (frameshifted)       :: 81 of 239
            Pseudo Genes (incomplete)         :: 190 of 239
            Pseudo Genes (internal stop)      :: 16 of 239
            Pseudo Genes (multiple problems)  :: 42 of 239
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5072301
                     /organism="Azotobacter beijerinckii"
                     /mol_type="genomic DNA"
                     /strain="DSM 373"
                     /db_xref="taxon:170623"
WGS         FNYQ01000001-FNYQ01000249
WGS_SCAFLD  NZ_FNYQ01000001-NZ_FNYQ01000249
//
LOCUS       NZ_BAABNP010000000   3924127 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brevibacterium ammoniilyticum strain KACC 15558, whole genome
            shotgun sequencing project.
ACCESSION   NZ_BAABNP000000000
VERSION     NZ_BAABNP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMD00729979
            Assembly: GCF_038429965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brevibacterium ammoniilyticum
  ORGANISM  Brevibacterium ammoniilyticum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
REFERENCE   1
  AUTHORS   Manzoor,S., Abbas,S., Arshad,M., Li,W.J. and Ahmed,I.
  TITLE     Characterization of antibiotic resistant novel bacterial strains
            and their environmental applications
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3924127)
  AUTHORS   Manzoor,S., Abbas,S., Arshad,M., Li,W.J. and Ahmed,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2024) Contact:Iftikhar Ahmed National
            Agricultural Research Centre Islamabad, National Culture Collection
            of Pakistan Land Resources Research Institute; Park Road, Islamabad
            45500, Pakistan URL :http://www.parc.gov.pk/
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            BAABNP000000000.1.
            The Brevibacterium ammoniilyticum whole genome shotgun (WGS)
            project has the project accession NZ_BAABNP000000000.  This version
            of the project (01) has the accession number NZ_BAABNP010000000,
            and consists of sequences BAABNP010000001-BAABNP010000045.
            Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
            
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SPAdes v. 3.13.0
            Genome Coverage       :: 175x
            Sequencing Technology :: Illumina NovaSeq PE150
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038429965.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:15:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,567
            CDSs (total)                      :: 3,514
            Genes (coding)                    :: 3,483
            CDSs (with protein)               :: 3,483
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 8 of 31
            Pseudo Genes (incomplete)         :: 24 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            Pseudo Genes (multiple problems)  :: 3 of 31
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3924127
                     /organism="Brevibacterium ammoniilyticum"
                     /mol_type="genomic DNA"
                     /strain="KACC 15558"
                     /isolation_source="environment sample of wastewater
                     treatment plant"
                     /culture_collection="KACC:15558"
                     /type_material="type strain of Brevibacterium
                     ammoniilyticum"
                     /db_xref="taxon:1046555"
                     /geo_loc_name="South Korea:Gangwon-do, Wonju-si,
                     Jijeong-myeon, Anchang-ri"
                     /lat_lon="37.36 N 127.79 E"
                     /collection_date="2011-05-11"
WGS         BAABNP010000001-BAABNP010000045
WGS_SCAFLD  NZ_BAABNP010000001-NZ_BAABNP010000045
//
LOCUS       NZ_JAQSIY010000000   3266856 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella abortus strain 104M, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAQSIY000000000
VERSION     NZ_JAQSIY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN33208917
            Assembly: GCF_029324875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella abortus (Brucella melitensis biovar Abortus)
  ORGANISM  Brucella abortus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3266856)
  AUTHORS   Prasolova,O., Krylova,E., Bogomazova,A., Soltynskaya,I.,
            Sklyarov,O., Gordeeva,V., Timofeeva,I., Motorygin,A. and Panin,A.
  TITLE     The Russian collection of Brucella abortus vaccine strains: short
            description, implementation and genomic analysis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3266856)
  AUTHORS   Krylova,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) Molecular Biology, Rosselkhoznadzor the
            Russian State Center for Animal Feed and Drug Standardization and
            Quality, 5 Zvenigorodskoye Shosse, Moscow 123022, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAQSIY000000000.1.
            The Brucella abortus whole genome shotgun (WGS) project has the
            project accession NZ_JAQSIY000000000.  This version of the project
            (01) has the accession number NZ_JAQSIY010000000, and consists of
            sequences JAQSIY010000001-JAQSIY010000026.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 97x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029324875.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:07:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,227
            CDSs (total)                      :: 3,169
            Genes (coding)                    :: 2,981
            CDSs (with protein)               :: 2,981
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 188
            CDSs (without protein)            :: 188
            Pseudo Genes (ambiguous residues) :: 0 of 188
            Pseudo Genes (frameshifted)       :: 123 of 188
            Pseudo Genes (incomplete)         :: 52 of 188
            Pseudo Genes (internal stop)      :: 36 of 188
            Pseudo Genes (multiple problems)  :: 21 of 188
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3266856
                     /organism="Brucella abortus"
                     /mol_type="genomic DNA"
                     /strain="104M"
                     /host="cow"
                     /db_xref="taxon:235"
                     /geo_loc_name="Russia"
                     /collection_date="1970"
WGS         JAQSIY010000001-JAQSIY010000026
WGS_SCAFLD  NZ_JAQSIY010000001-NZ_JAQSIY010000026
//
LOCUS       NZ_MIGE01000000      4272685 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus licheniformis strain YNP1-TSU, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MIGE00000000
VERSION     NZ_MIGE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05559629
            Assembly: GCF_001914255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus licheniformis
  ORGANISM  Bacillus licheniformis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus.
REFERENCE   1  (bases 1 to 4272685)
  AUTHORS   Ohair,J., Zhou,S. and Li,H.
  TITLE     Whole genome sequencing of cellulolytic thermophiles isolated from
            Yellowstone National Park
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4272685)
  AUTHORS   Scholz,M., Koues,O., Zhou,S. and Li,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-SEP-2016) Agricultural and Environmental Sciences,
            Tennessee State University, 3500 John A Merritt Blvd, Nashville, TN
            37209, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MIGE00000000.1.
            The Bacillus licheniformis whole genome shotgun (WGS) project has
            the project accession NZ_MIGE00000000.  This version of the project
            (01) has the accession number NZ_MIGE01000000, and consists of
            sequences MIGE01000001-MIGE01000039.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 05-MAY-2016
            Assembly Method           :: SPAdes v. 2.0
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: GCA_000011655.1
            Genome Coverage           :: 195.0x
            Sequencing Technology     :: Illumina HiSeq 3000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001914255.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:38:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,462
            CDSs (total)                      :: 4,389
            Genes (coding)                    :: 4,283
            CDSs (with protein)               :: 4,283
            Genes (RNA)                       :: 73
            rRNAs                             :: 3, 1 (5S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 106
            CDSs (without protein)            :: 106
            Pseudo Genes (ambiguous residues) :: 0 of 106
            Pseudo Genes (frameshifted)       :: 58 of 106
            Pseudo Genes (incomplete)         :: 52 of 106
            Pseudo Genes (internal stop)      :: 16 of 106
            Pseudo Genes (multiple problems)  :: 19 of 106
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4272685
                     /organism="Bacillus licheniformis"
                     /mol_type="genomic DNA"
                     /strain="YNP1-TSU"
                     /isolation_source="heated water in contact with
                     grass/sediment layer"
                     /db_xref="taxon:1402"
                     /geo_loc_name="USA: Yellowstone National Park, WY"
                     /lat_lon="44.78 N 110.69 W"
                     /collection_date="2015-09-01"
WGS         MIGE01000001-MIGE01000039
WGS_SCAFLD  NZ_CM007615
WGS_SCAFLD  NZ_KV880754-NZ_KV880762
//
LOCUS       NZ_JBJNPW010000000   2448218 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium longum subsp. longum strain IATA116, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBJNPW000000000
VERSION     NZ_JBJNPW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45053975
            Assembly: GCF_049204995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium longum subsp. longum
  ORGANISM  Bifidobacterium longum subsp. longum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2448218)
  AUTHORS   Samarra,A. and Collado,M.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2024) Biotechnology, Institute of Agrochemistry
            and Food Technology, National Spanish Research Council, Catedratic
            Agustin Escardino Benlloch, 7, Paterna, VALENCIA 46980, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJNPW000000000.1.
            The Bifidobacterium longum subsp. longum whole genome shotgun (WGS)
            project has the project accession NZ_JBJNPW000000000.  This version
            of the project (01) has the accession number NZ_JBJNPW010000000,
            and consists of sequences JBJNPW010000001-JBJNPW010000036.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: AUG-2024
            Assembly Method        :: SPAdes v. v4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049204995.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:40:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,114
            CDSs (total)                      :: 2,048
            Genes (coding)                    :: 2,000
            CDSs (with protein)               :: 2,000
            Genes (RNA)                       :: 66
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 12 of 48
            Pseudo Genes (incomplete)         :: 41 of 48
            Pseudo Genes (internal stop)      :: 6 of 48
            Pseudo Genes (multiple problems)  :: 11 of 48
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2448218
                     /organism="Bifidobacterium longum subsp. longum"
                     /mol_type="genomic DNA"
                     /strain="IATA116"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /sub_species="longum"
                     /db_xref="taxon:1679"
                     /geo_loc_name="Spain: Valencia"
                     /collection_date="2022"
                     /collected_by="Anna Samarra, IATA-CSIC"
WGS         JBJNPW010000001-JBJNPW010000036
WGS_SCAFLD  NZ_JBJNPW010000001-NZ_JBJNPW010000036
//
LOCUS       NZ_FOSX01000000      4914450 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Azotobacter beijerinckii strain DSM 381, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOSX00000000
VERSION     NZ_FOSX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04244574
            Assembly: GCF_900114395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Azotobacter beijerinckii
  ORGANISM  Azotobacter beijerinckii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Azotobacter.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOSX00000000.1.
            The Azotobacter beijerinckii whole genome shotgun (WGS) project has
            the project accession NZ_FOSX00000000.  This version of the project
            (01) has the accession number NZ_FOSX01000000, and consists of
            sequences FOSX01000001-FOSX01000249.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900114395.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:36:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,920
            CDSs (total)                      :: 4,858
            Genes (coding)                    :: 4,604
            CDSs (with protein)               :: 4,604
            Genes (RNA)                       :: 62
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 254
            CDSs (without protein)            :: 254
            Pseudo Genes (ambiguous residues) :: 0 of 254
            Pseudo Genes (frameshifted)       :: 75 of 254
            Pseudo Genes (incomplete)         :: 216 of 254
            Pseudo Genes (internal stop)      :: 15 of 254
            Pseudo Genes (multiple problems)  :: 49 of 254
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4914450
                     /organism="Azotobacter beijerinckii"
                     /mol_type="genomic DNA"
                     /strain="DSM 381"
                     /db_xref="taxon:170623"
WGS         FOSX01000001-FOSX01000249
WGS_SCAFLD  NZ_FOSX01000001-NZ_FOSX01000249
//
LOCUS       NZ_JBJNRG010000000   2209886 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium bifidum strain IATA001, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJNRG000000000
VERSION     NZ_JBJNRG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45053939
            Assembly: GCF_049192085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium bifidum
  ORGANISM  Bifidobacterium bifidum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2209886)
  AUTHORS   Samarra,A. and Collado,M.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2024) Biotechnology, Institute of Agrochemistry
            and Food Technology, National Spanish Research Council, Catedratic
            Agustin Escardino Benlloch, 7, Paterna, VALENCIA 46980, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJNRG000000000.1.
            The Bifidobacterium bifidum whole genome shotgun (WGS) project has
            the project accession NZ_JBJNRG000000000.  This version of the
            project (01) has the accession number NZ_JBJNRG010000000, and
            consists of sequences JBJNRG010000001-JBJNRG010000032.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: AUG-2024
            Assembly Method        :: SPAdes v. v4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049192085.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:39:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,868
            CDSs (total)                      :: 1,809
            Genes (coding)                    :: 1,728
            CDSs (with protein)               :: 1,728
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 36 of 81
            Pseudo Genes (incomplete)         :: 60 of 81
            Pseudo Genes (internal stop)      :: 5 of 81
            Pseudo Genes (multiple problems)  :: 20 of 81
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2209886
                     /organism="Bifidobacterium bifidum"
                     /mol_type="genomic DNA"
                     /strain="IATA001"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:1681"
                     /geo_loc_name="Spain: Valencia"
                     /collection_date="2022"
                     /collected_by="Anna Samarra, IATA-CSIC"
WGS         JBJNRG010000001-JBJNRG010000032
WGS_SCAFLD  NZ_JBJNRG010000001-NZ_JBJNRG010000032
//
LOCUS       NZ_CBDDOF010000000   3242816 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella abortus isolate BA849, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CBDDOF000000000
VERSION     NZ_CBDDOF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117929756
            Assembly: GCF_965231715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella abortus (Brucella melitensis biovar Abortus)
  ORGANISM  Brucella abortus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3242816)
  AUTHORS   Motro,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2025) Faculty of Health Sciences, MAGICAL, Marcus
            Campus, Ben Gurion University of the Negev, Beer Sheva, Israel
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBDDOF000000000.1.
            The Brucella abortus whole genome shotgun (WGS) project has the
            project accession NZ_CBDDOF000000000.  This version of the project
            (01) has the accession number NZ_CBDDOF010000000, and consists of
            sequences CBDDOF010000001-CBDDOF010000031.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_965231715.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:39:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,199
            CDSs (total)                      :: 3,143
            Genes (coding)                    :: 2,964
            CDSs (with protein)               :: 2,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 179
            CDSs (without protein)            :: 179
            Pseudo Genes (ambiguous residues) :: 0 of 179
            Pseudo Genes (frameshifted)       :: 121 of 179
            Pseudo Genes (incomplete)         :: 46 of 179
            Pseudo Genes (internal stop)      :: 33 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3242816
                     /organism="Brucella abortus"
                     /mol_type="genomic DNA"
                     /isolate="BA849"
                     /db_xref="taxon:235"
                     /geo_loc_name="Israel"
                     /collection_date="2021"
WGS         CBDDOF010000001-CBDDOF010000031
WGS_SCAFLD  NZ_CBDDOF010000001-NZ_CBDDOF010000031
//
LOCUS       NZ_CBDDOE010000000   3242749 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella abortus isolate BA032, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CBDDOE000000000
VERSION     NZ_CBDDOE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117929758
            Assembly: GCF_965231705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella abortus (Brucella melitensis biovar Abortus)
  ORGANISM  Brucella abortus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3242749)
  AUTHORS   Motro,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2025) Faculty of Health Sciences, MAGICAL, Marcus
            Campus, Ben Gurion University of the Negev, Beer Sheva, Israel
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBDDOE000000000.1.
            The Brucella abortus whole genome shotgun (WGS) project has the
            project accession NZ_CBDDOE000000000.  This version of the project
            (01) has the accession number NZ_CBDDOE010000000, and consists of
            sequences CBDDOE010000001-CBDDOE010000030.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_965231705.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:45:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,199
            CDSs (total)                      :: 3,143
            Genes (coding)                    :: 2,963
            CDSs (with protein)               :: 2,963
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 180
            CDSs (without protein)            :: 180
            Pseudo Genes (ambiguous residues) :: 0 of 180
            Pseudo Genes (frameshifted)       :: 121 of 180
            Pseudo Genes (incomplete)         :: 47 of 180
            Pseudo Genes (internal stop)      :: 33 of 180
            Pseudo Genes (multiple problems)  :: 19 of 180
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3242749
                     /organism="Brucella abortus"
                     /mol_type="genomic DNA"
                     /isolate="BA032"
                     /db_xref="taxon:235"
                     /geo_loc_name="Israel"
                     /collection_date="2021"
WGS         CBDDOE010000001-CBDDOE010000030
WGS_SCAFLD  NZ_CBDDOE010000001-NZ_CBDDOE010000030
//
LOCUS       NZ_FOOA01000000      4715690 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Aureimonas phyllosphaerae strain L9-753,KACC 16231,DSM 25026, whole
            genome shotgun sequencing project.
ACCESSION   NZ_FOOA00000000
VERSION     NZ_FOOA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05216566
            Assembly: GCF_900113065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aureimonas phyllosphaerae
  ORGANISM  Aureimonas phyllosphaerae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Aureimonas.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOOA00000000.1.
            The Aureimonas phyllosphaerae whole genome shotgun (WGS) project
            has the project accession NZ_FOOA00000000.  This version of the
            project (01) has the accession number NZ_FOOA01000000, and consists
            of sequences FOOA01000001-FOOA01000062.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900113065.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:43:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,523
            CDSs (total)                      :: 4,468
            Genes (coding)                    :: 4,415
            CDSs (with protein)               :: 4,415
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 10 of 53
            Pseudo Genes (incomplete)         :: 43 of 53
            Pseudo Genes (internal stop)      :: 9 of 53
            Pseudo Genes (multiple problems)  :: 8 of 53
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4715690
                     /organism="Aureimonas phyllosphaerae"
                     /mol_type="genomic DNA"
                     /strain="L9-753,KACC 16231,DSM 25026"
                     /db_xref="taxon:1166078"
WGS         FOOA01000001-FOOA01000062
WGS_SCAFLD  NZ_FOOA01000001-NZ_FOOA01000062
//
LOCUS       NZ_CBDDOA010000000   3242737 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella abortus isolate BA284, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CBDDOA000000000
VERSION     NZ_CBDDOA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117929754
            Assembly: GCF_965231675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella abortus (Brucella melitensis biovar Abortus)
  ORGANISM  Brucella abortus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3242737)
  AUTHORS   Motro,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2025) Faculty of Health Sciences, MAGICAL, Marcus
            Campus, Ben Gurion University of the Negev, Beer Sheva, Israel
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBDDOA000000000.1.
            The Brucella abortus whole genome shotgun (WGS) project has the
            project accession NZ_CBDDOA000000000.  This version of the project
            (01) has the accession number NZ_CBDDOA010000000, and consists of
            sequences CBDDOA010000001-CBDDOA010000030.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_965231675.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:42:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,197
            CDSs (total)                      :: 3,141
            Genes (coding)                    :: 2,961
            CDSs (with protein)               :: 2,961
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 180
            CDSs (without protein)            :: 180
            Pseudo Genes (ambiguous residues) :: 0 of 180
            Pseudo Genes (frameshifted)       :: 122 of 180
            Pseudo Genes (incomplete)         :: 46 of 180
            Pseudo Genes (internal stop)      :: 33 of 180
            Pseudo Genes (multiple problems)  :: 19 of 180
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3242737
                     /organism="Brucella abortus"
                     /mol_type="genomic DNA"
                     /isolate="BA284"
                     /db_xref="taxon:235"
                     /geo_loc_name="Israel"
                     /collection_date="2021"
WGS         CBDDOA010000001-CBDDOA010000030
WGS_SCAFLD  NZ_CBDDOA010000001-NZ_CBDDOA010000030
//
LOCUS       NZ_MIEV01000000      5619392 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus cereus strain MOD1_Bc139, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MIEV00000000
VERSION     NZ_MIEV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05608066
            Assembly: GCF_001913575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus cereus
  ORGANISM  Bacillus cereus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 5619392)
  AUTHORS   Chase,H., Carter,L., Tall,B. and Gopinath,G.
  TITLE     Genome sequences of Bacillus cereus isolates from spices and other
            dried food sources
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5619392)
  AUTHORS   Chase,H., Carter,L., Tall,B. and Gopinath,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-SEP-2016) US FDA, OARSA, CFSAN, 8301 Muirkirk Road,
            Laurel, MD 20708, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MIEV00000000.1.
            The Bacillus cereus whole genome shotgun (WGS) project has the
            project accession NZ_MIEV00000000.  This version of the project
            (01) has the accession number NZ_MIEV01000000, and consists of
            sequences MIEV01000001-MIEV01000037.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. AUG-2016
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001913575.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:42:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,732
            CDSs (total)                      :: 5,611
            Genes (coding)                    :: 5,433
            CDSs (with protein)               :: 5,433
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 23S)
            partial rRNAs                     :: 3, 3 (5S, 16S)
            tRNAs                             :: 103
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 178
            CDSs (without protein)            :: 178
            Pseudo Genes (ambiguous residues) :: 0 of 178
            Pseudo Genes (frameshifted)       :: 62 of 178
            Pseudo Genes (incomplete)         :: 143 of 178
            Pseudo Genes (internal stop)      :: 34 of 178
            Pseudo Genes (multiple problems)  :: 46 of 178
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5619392
                     /organism="Bacillus cereus"
                     /mol_type="genomic DNA"
                     /strain="MOD1_Bc139"
                     /isolation_source="dietary supplement"
                     /db_xref="taxon:1396"
                     /geo_loc_name="USA: MD"
                     /collection_date="2015"
                     /collected_by="MOD1_CVM"
WGS         MIEV01000001-MIEV01000037
WGS_SCAFLD  NZ_MIEV01000001-NZ_MIEV01000037
//
LOCUS       NZ_JBCDMQ010000000   6351050 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacteroides thetaiotaomicron strain 498, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBCDMQ000000000
VERSION     NZ_JBCDMQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40948512
            Assembly: GCF_038439775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacteroides thetaiotaomicron
  ORGANISM  Bacteroides thetaiotaomicron
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Bacteroidaceae; Bacteroides.
REFERENCE   1  (bases 1 to 6351050)
  AUTHORS   Hu,J.
  TITLE     Genome of Bacteroides thetaiotaomicron
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6351050)
  AUTHORS   Hu,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-APR-2024) Shenzhen Institute of Synthetic Biology,
            Shenzhen Institutes of Advanced Technology, Chinese Academy of
            Sciences, Xueyuan Street, Shenzhen 518055, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCDMQ000000000.1.
            The Bacteroides thetaiotaomicron whole genome shotgun (WGS) project
            has the project accession NZ_JBCDMQ000000000.  This version of the
            project (01) has the accession number NZ_JBCDMQ010000000, and
            consists of sequences JBCDMQ010000001-JBCDMQ010000071.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: flye v. v2.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038439775.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:47:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,897
            CDSs (total)                      :: 4,822
            Genes (coding)                    :: 4,764
            CDSs (with protein)               :: 4,764
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 58
            CDSs (without protein)            :: 58
            Pseudo Genes (ambiguous residues) :: 0 of 58
            Pseudo Genes (frameshifted)       :: 13 of 58
            Pseudo Genes (incomplete)         :: 43 of 58
            Pseudo Genes (internal stop)      :: 10 of 58
            Pseudo Genes (multiple problems)  :: 7 of 58
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6351050
                     /organism="Bacteroides thetaiotaomicron"
                     /mol_type="genomic DNA"
                     /strain="498"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:818"
                     /geo_loc_name="China"
                     /collection_date="2020-08-08"
WGS         JBCDMQ010000001-JBCDMQ010000071
WGS_SCAFLD  NZ_JBCDMQ010000001-NZ_JBCDMQ010000071
//
LOCUS       NZ_LKPQ01000000      4205676 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus licheniformis strain B4124, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LKPQ00000000
VERSION     NZ_LKPQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04127603
            Assembly: GCF_001925055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus licheniformis
  ORGANISM  Bacillus licheniformis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus.
REFERENCE   1  (bases 1 to 4205676)
  AUTHORS   Berendsen,E.M., Koning,R.A., Boekhorst,J., de Jong,A., Kuipers,O.P.
            and Wells-Bennik,M.H.
  TITLE     High-Level Heat Resistance of Spores of Bacillus amyloliquefaciens
            and Bacillus licheniformis Results from the Presence of a spoVA
            Operon in a Tn1546 Transposon
  JOURNAL   Front Microbiol 7, 1912 (2016)
   PUBMED   27994575
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4205676)
  AUTHORS   Boekhorst,J., Berendsen,E.M., Wells-Bennik,M.H. and Kuipers,O.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-OCT-2015) Health, NIZO Food Research, Kernhemseweg 2,
            Ede 6718 ZB, Netherlands
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LKPQ00000000.1.
            The Bacillus licheniformis whole genome shotgun (WGS) project has
            the project accession NZ_LKPQ00000000.  This version of the project
            (01) has the accession number NZ_LKPQ01000000, and consists of
            sequences LKPQ01000001-LKPQ01000018.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 21-FEB-2014
            Assembly Method       :: Ray v. 2.3.1
            Genome Coverage       :: 70.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001925055.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:40:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,414
            CDSs (total)                      :: 4,318
            Genes (coding)                    :: 4,214
            CDSs (with protein)               :: 4,214
            Genes (RNA)                       :: 96
            rRNAs                             :: 7, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 7, 7 (16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 104
            CDSs (without protein)            :: 104
            Pseudo Genes (ambiguous residues) :: 0 of 104
            Pseudo Genes (frameshifted)       :: 57 of 104
            Pseudo Genes (incomplete)         :: 49 of 104
            Pseudo Genes (internal stop)      :: 15 of 104
            Pseudo Genes (multiple problems)  :: 17 of 104
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4205676
                     /organism="Bacillus licheniformis"
                     /mol_type="genomic DNA"
                     /strain="B4124"
                     /db_xref="taxon:1402"
                     /geo_loc_name="Netherlands"
                     /collection_date="2013-01-01"
WGS         LKPQ01000001-LKPQ01000018
WGS_SCAFLD  NZ_LKPQ01000001-NZ_LKPQ01000018
//
LOCUS       NZ_JBJNQO010000000   2295322 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium adolescentis strain IATA066, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJNQO000000000
VERSION     NZ_JBJNQO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45053957
            Assembly: GCF_049205335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium adolescentis
  ORGANISM  Bifidobacterium adolescentis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2295322)
  AUTHORS   Samarra,A. and Collado,M.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2024) Biotechnology, Institute of Agrochemistry
            and Food Technology, National Spanish Research Council, Catedratic
            Agustin Escardino Benlloch, 7, Paterna, VALENCIA 46980, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJNQO000000000.1.
            The Bifidobacterium adolescentis whole genome shotgun (WGS) project
            has the project accession NZ_JBJNQO000000000.  This version of the
            project (01) has the accession number NZ_JBJNQO010000000, and
            consists of sequences JBJNQO010000001-JBJNQO010000073.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: AUG-2024
            Assembly Method        :: SPAdes v. v4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049205335.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:54:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,010
            CDSs (total)                      :: 1,942
            Genes (coding)                    :: 1,903
            CDSs (with protein)               :: 1,903
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 11 of 39
            Pseudo Genes (incomplete)         :: 34 of 39
            Pseudo Genes (internal stop)      :: 5 of 39
            Pseudo Genes (multiple problems)  :: 10 of 39
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2295322
                     /organism="Bifidobacterium adolescentis"
                     /mol_type="genomic DNA"
                     /strain="IATA066"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:1680"
                     /geo_loc_name="Spain: Valencia"
                     /collection_date="2022"
                     /collected_by="Anna Samarra, IATA-CSIC"
WGS         JBJNQO010000001-JBJNQO010000073
WGS_SCAFLD  NZ_JBJNQO010000001-NZ_JBJNQO010000073
//
LOCUS       NZ_JBJNRA010000000   2210511 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bifidobacterium bifidum strain IATA016, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJNRA000000000
VERSION     NZ_JBJNRA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45053945
            Assembly: GCF_049192055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium bifidum
  ORGANISM  Bifidobacterium bifidum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2210511)
  AUTHORS   Samarra,A. and Collado,M.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2024) Biotechnology, Institute of Agrochemistry
            and Food Technology, National Spanish Research Council, Catedratic
            Agustin Escardino Benlloch, 7, Paterna, VALENCIA 46980, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJNRA000000000.1.
            The Bifidobacterium bifidum whole genome shotgun (WGS) project has
            the project accession NZ_JBJNRA000000000.  This version of the
            project (01) has the accession number NZ_JBJNRA010000000, and
            consists of sequences JBJNRA010000001-JBJNRA010000037.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: AUG-2024
            Assembly Method        :: SPAdes v. v4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049192055.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:43:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,871
            CDSs (total)                      :: 1,812
            Genes (coding)                    :: 1,730
            CDSs (with protein)               :: 1,730
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 35 of 82
            Pseudo Genes (incomplete)         :: 59 of 82
            Pseudo Genes (internal stop)      :: 5 of 82
            Pseudo Genes (multiple problems)  :: 17 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2210511
                     /organism="Bifidobacterium bifidum"
                     /mol_type="genomic DNA"
                     /strain="IATA016"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:1681"
                     /geo_loc_name="Spain: Valencia"
                     /collection_date="2022"
                     /collected_by="Anna Samarra, IATA-CSIC"
WGS         JBJNRA010000001-JBJNRA010000037
WGS_SCAFLD  NZ_JBJNRA010000001-NZ_JBJNRA010000037
//
LOCUS       NZ_CBDDOD010000000   3242926 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella abortus isolate BA571, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CBDDOD000000000
VERSION     NZ_CBDDOD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117929755
            Assembly: GCF_965231685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella abortus (Brucella melitensis biovar Abortus)
  ORGANISM  Brucella abortus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3242926)
  AUTHORS   Motro,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2025) Faculty of Health Sciences, MAGICAL, Marcus
            Campus, Ben Gurion University of the Negev, Beer Sheva, Israel
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBDDOD000000000.1.
            The Brucella abortus whole genome shotgun (WGS) project has the
            project accession NZ_CBDDOD000000000.  This version of the project
            (01) has the accession number NZ_CBDDOD010000000, and consists of
            sequences CBDDOD010000001-CBDDOD010000031.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_965231685.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:57:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,200
            CDSs (total)                      :: 3,144
            Genes (coding)                    :: 2,965
            CDSs (with protein)               :: 2,965
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 179
            CDSs (without protein)            :: 179
            Pseudo Genes (ambiguous residues) :: 0 of 179
            Pseudo Genes (frameshifted)       :: 121 of 179
            Pseudo Genes (incomplete)         :: 46 of 179
            Pseudo Genes (internal stop)      :: 33 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3242926
                     /organism="Brucella abortus"
                     /mol_type="genomic DNA"
                     /isolate="BA571"
                     /db_xref="taxon:235"
                     /geo_loc_name="Israel"
                     /collection_date="2021"
WGS         CBDDOD010000001-CBDDOD010000031
WGS_SCAFLD  NZ_CBDDOD010000001-NZ_CBDDOD010000031
//
LOCUS       NZ_NTYK01000000      5473374 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus cereus strain AFS004701, whole genome shotgun sequencing
            project.
ACCESSION   NZ_NTYK00000000
VERSION     NZ_NTYK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07597300
            Assembly: GCF_002559225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus cereus
  ORGANISM  Bacillus cereus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 5473374)
  AUTHORS   Bleich,R.M., Kirk,G.J., Santa Maria,K.C., Allen,S.E., Farag,S.,
            Shank,E.A. and Bowers,A.
  CONSRTM   Agbiome Team Llc
  TITLE     Large-scale bioinformatics analysis of Bacillus genomes uncovers
            conserved roles of natural products in bacterial physiology
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5473374)
  AUTHORS   Bleich,R.M., Kirk,G.J., Santa Maria,K.C., Allen,S.E., Farag,S.,
            Shank,E.A. and Bowers,A.
  CONSRTM   Agbiome Team Llc
  TITLE     Direct Submission
  JOURNAL   Submitted (01-SEP-2017) Chemical Biology and Medicinal Chemistry,
            UNC Chapel Hill, 125 Mason Farm Rd., Chapel Hill, NC 17599, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NTYK00000000.1.
            The Bacillus cereus whole genome shotgun (WGS) project has the
            project accession NZ_NTYK00000000.  This version of the project
            (01) has the accession number NZ_NTYK01000000, and consists of
            sequences NTYK01000001-NTYK01000066.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC Assembly Cell v. 4.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 59x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002559225.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:55:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,652
            CDSs (total)                      :: 5,568
            Genes (coding)                    :: 5,387
            CDSs (with protein)               :: 5,387
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 181
            CDSs (without protein)            :: 181
            Pseudo Genes (ambiguous residues) :: 0 of 181
            Pseudo Genes (frameshifted)       :: 63 of 181
            Pseudo Genes (incomplete)         :: 138 of 181
            Pseudo Genes (internal stop)      :: 30 of 181
            Pseudo Genes (multiple problems)  :: 40 of 181
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5473374
                     /organism="Bacillus cereus"
                     /mol_type="genomic DNA"
                     /strain="AFS004701"
                     /isolation_source="core"
                     /host="Corn"
                     /db_xref="taxon:1396"
                     /geo_loc_name="USA: NC"
                     /collection_date="2014-04-21"
                     /collected_by="AgBiome"
WGS         NTYK01000001-NTYK01000066
WGS_SCAFLD  NZ_NTYK01000001-NZ_NTYK01000066
//
LOCUS       NZ_JBXGJK010000000   2248666 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Bergeyella zoohelcum isolate SUG3744, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGJK000000000
VERSION     NZ_JBXGJK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52836061
            Sequence Read Archive: SRR21357714
            Assembly: GCF_056857435.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Bergeyella zoohelcum (milk metagenome)
  ORGANISM  Bergeyella zoohelcum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Bergeyella.
REFERENCE   1  (bases 1 to 2248666)
  AUTHORS   Holman,D.B., Gzyl,K.E. and Kommadath,A.
  TITLE     Metagenome-assembled genomes from sow colostrum and milk
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2248666)
  AUTHORS   Holman,D.B., Gzyl,K.E. and Kommadath,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-NOV-2025) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGJK000000000.1.
            The Bergeyella zoohelcum whole genome shotgun (WGS) project has the
            project accession NZ_JBXGJK000000000.  This version of the project
            (01) has the accession number NZ_JBXGJK010000000, and consists of
            sequences JBXGJK010000001-JBXGJK010000113.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v.1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 20.2x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857435.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:17:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,129
            CDSs (total)                      :: 2,086
            Genes (coding)                    :: 2,030
            CDSs (with protein)               :: 2,030
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 1 (5S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 13 of 56
            Pseudo Genes (incomplete)         :: 43 of 56
            Pseudo Genes (internal stop)      :: 8 of 56
            Pseudo Genes (multiple problems)  :: 7 of 56
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2248666
                     /organism="Bergeyella zoohelcum"
                     /mol_type="genomic DNA"
                     /isolate="SUG3744"
                     /isolation_source="Colostrum"
                     /host="pig"
                     /db_xref="taxon:1015"
                     /environmental_sample
                     /geo_loc_name="Canada: Alberta, Lacombe"
                     /lat_lon="52.4685 N 113.7307 W"
                     /altitude="850 m"
                     /collection_date="2020"
                     /metagenome_source="milk metagenome"
                     /metagenomic
WGS         JBXGJK010000001-JBXGJK010000113
WGS_SCAFLD  NZ_JBXGJK010000001-NZ_JBXGJK010000113
//
LOCUS       NZ_NFCP01000000      6234236 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus thuringiensis serovar jinghongiensis strain BGSC 4AR1,
            whole genome shotgun sequencing project.
ACCESSION   NZ_NFCP00000000
VERSION     NZ_NFCP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05934503
            Assembly: GCF_002146445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus thuringiensis serovar jinghongiensis
  ORGANISM  Bacillus thuringiensis serovar jinghongiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 6234236)
  AUTHORS   Zheng,J., Gao,Q., Liu,H., Peng,D., Ruan,L. and Sun,M.
  TITLE     Comparative genomics of Bacillus thuringiensis reveals a path to
            pathogens against multiple invertebrate hosts
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6234236)
  AUTHORS   Zheng,J., Gao,Q., Liu,H., Peng,D., Ruan,L. and Sun,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-OCT-2016) State Key Laboratory of Agricultural
            Microbiology, Huazhong Agricultural University, 1st Shizishan,
            Wuhan, Hubei 430070, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NFCP00000000.1.
            The Bacillus thuringiensis serovar jinghongiensis whole genome
            shotgun (WGS) project has the project accession NZ_NFCP00000000.
            This version of the project (01) has the accession number
            NZ_NFCP01000000, and consists of sequences
            NFCP01000001-NFCP01000067.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: ABySS v. 1.5.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 120.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002146445.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:58:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,385
            CDSs (total)                      :: 6,243
            Genes (coding)                    :: 5,937
            CDSs (with protein)               :: 5,937
            Genes (RNA)                       :: 142
            rRNAs                             :: 13, 12, 13 (5S, 16S, 23S)
            complete rRNAs                    :: 12 (5S)
            partial rRNAs                     :: 1, 12, 13 (5S, 16S, 23S)
            tRNAs                             :: 99
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 306
            CDSs (without protein)            :: 306
            Pseudo Genes (ambiguous residues) :: 0 of 306
            Pseudo Genes (frameshifted)       :: 117 of 306
            Pseudo Genes (incomplete)         :: 222 of 306
            Pseudo Genes (internal stop)      :: 75 of 306
            Pseudo Genes (multiple problems)  :: 86 of 306
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6234236
                     /organism="Bacillus thuringiensis serovar jinghongiensis"
                     /mol_type="genomic DNA"
                     /strain="BGSC 4AR1"
                     /serotype="H42"
                     /serovar="jinghongiensis"
                     /isolation_source="soil"
                     /db_xref="taxon:180844"
                     /geo_loc_name="China"
WGS         NFCP01000001-NFCP01000067
WGS_SCAFLD  NZ_NFCP01000001-NZ_NFCP01000067
//
LOCUS       NZ_JBXGJA010000000   1766049 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Bifidobacterium mongoliense isolate SUG3753, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBXGJA000000000
VERSION     NZ_JBXGJA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52836071
            Sequence Read Archive: SRR21357814
            Assembly: GCF_056857215.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Bifidobacterium mongoliense (milk metagenome)
  ORGANISM  Bifidobacterium mongoliense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 1766049)
  AUTHORS   Holman,D.B., Gzyl,K.E. and Kommadath,A.
  TITLE     Metagenome-assembled genomes from sow colostrum and milk
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1766049)
  AUTHORS   Holman,D.B., Gzyl,K.E. and Kommadath,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-NOV-2025) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGJA000000000.1.
            The Bifidobacterium mongoliense whole genome shotgun (WGS) project
            has the project accession NZ_JBXGJA000000000.  This version of the
            project (01) has the accession number NZ_JBXGJA010000000, and
            consists of sequences JBXGJA010000001-JBXGJA010000125.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v.1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857215.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:20:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,535
            CDSs (total)                      :: 1,489
            Genes (coding)                    :: 1,422
            CDSs (with protein)               :: 1,422
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 41
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 9 of 67
            Pseudo Genes (incomplete)         :: 56 of 67
            Pseudo Genes (internal stop)      :: 3 of 67
            Pseudo Genes (multiple problems)  :: 1 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1766049
                     /organism="Bifidobacterium mongoliense"
                     /mol_type="genomic DNA"
                     /isolate="SUG3753"
                     /isolation_source="milk"
                     /host="pig"
                     /db_xref="taxon:518643"
                     /environmental_sample
                     /geo_loc_name="Canada: Alberta, Lacombe"
                     /lat_lon="52.4685 N 113.7307 W"
                     /altitude="850 m"
                     /collection_date="2020"
                     /metagenome_source="milk metagenome"
                     /metagenomic
WGS         JBXGJA010000001-JBXGJA010000125
WGS_SCAFLD  NZ_JBXGJA010000001-NZ_JBXGJA010000125
//
LOCUS       NZ_MOOU01000000      5906168 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus thuringiensis serovar indiana strain h16, whole genome
            shotgun sequencing project.
ACCESSION   NZ_MOOU00000000
VERSION     NZ_MOOU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05934563
            Assembly: GCF_002148105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus thuringiensis serovar indiana
  ORGANISM  Bacillus thuringiensis serovar indiana
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 5906168)
  AUTHORS   Zheng,J., Gao,Q., Liu,H., Peng,D., Ruan,L. and Sun,M.
  TITLE     Comparative genomics of Bacillus thuringiensis reveals a path to
            pathogens against multiple invertebrate hosts
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5906168)
  AUTHORS   Zheng,J., Gao,Q., Liu,H., Peng,D., Ruan,L. and Sun,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) State Key Laboratory of Agricultural
            Microbiology, Huazhong Agricultural University, 1st Shizishan,
            Wuhan, Hubei 430070, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MOOU00000000.1.
            The Bacillus thuringiensis serovar indiana whole genome shotgun
            (WGS) project has the project accession NZ_MOOU00000000.  This
            version of the project (01) has the accession number
            NZ_MOOU01000000, and consists of sequences
            MOOU01000001-MOOU01000226.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: ABySS v. 1.5.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 120.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002148105.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:55:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,335
            CDSs (total)                      :: 6,178
            Genes (coding)                    :: 5,835
            CDSs (with protein)               :: 5,835
            Genes (RNA)                       :: 157
            rRNAs                             :: 14, 15, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 11, 15, 5 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 118
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 343
            CDSs (without protein)            :: 343
            Pseudo Genes (ambiguous residues) :: 0 of 343
            Pseudo Genes (frameshifted)       :: 115 of 343
            Pseudo Genes (incomplete)         :: 245 of 343
            Pseudo Genes (internal stop)      :: 46 of 343
            Pseudo Genes (multiple problems)  :: 51 of 343
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5906168
                     /organism="Bacillus thuringiensis serovar indiana"
                     /mol_type="genomic DNA"
                     /strain="h16"
                     /serotype="H16"
                     /serovar="indiana"
                     /db_xref="taxon:180850"
WGS         MOOU01000001-MOOU01000226
WGS_SCAFLD  NZ_MOOU01000001-NZ_MOOU01000226
//
LOCUS       NZ_NTSG01000000      5496694 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus cereus strain AFS021466, whole genome shotgun sequencing
            project.
ACCESSION   NZ_NTSG00000000
VERSION     NZ_NTSG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07597513
            Assembly: GCF_002563075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus cereus
  ORGANISM  Bacillus cereus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 5496694)
  AUTHORS   Bleich,R.M., Kirk,G.J., Santa Maria,K.C., Allen,S.E., Farag,S.,
            Shank,E.A. and Bowers,A.
  CONSRTM   Agbiome Team Llc
  TITLE     Large-scale bioinformatics analysis of Bacillus genomes uncovers
            conserved roles of natural products in bacterial physiology
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5496694)
  AUTHORS   Bleich,R.M., Kirk,G.J., Santa Maria,K.C., Allen,S.E., Farag,S.,
            Shank,E.A. and Bowers,A.
  CONSRTM   Agbiome Team Llc
  TITLE     Direct Submission
  JOURNAL   Submitted (01-SEP-2017) Chemical Biology and Medicinal Chemistry,
            UNC Chapel Hill, 125 Mason Farm Rd., Chapel Hill, NC 17599, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NTSG00000000.1.
            The Bacillus cereus whole genome shotgun (WGS) project has the
            project accession NZ_NTSG00000000.  This version of the project
            (01) has the accession number NZ_NTSG01000000, and consists of
            sequences NTSG01000001-NTSG01000063.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC Assembly Cell v. 4.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 49.66x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002563075.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:55:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,675
            CDSs (total)                      :: 5,600
            Genes (coding)                    :: 5,418
            CDSs (with protein)               :: 5,418
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 182
            CDSs (without protein)            :: 182
            Pseudo Genes (ambiguous residues) :: 0 of 182
            Pseudo Genes (frameshifted)       :: 56 of 182
            Pseudo Genes (incomplete)         :: 142 of 182
            Pseudo Genes (internal stop)      :: 37 of 182
            Pseudo Genes (multiple problems)  :: 42 of 182
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5496694
                     /organism="Bacillus cereus"
                     /mol_type="genomic DNA"
                     /strain="AFS021466"
                     /isolation_source="core"
                     /host="Soybean"
                     /db_xref="taxon:1396"
                     /geo_loc_name="USA: IA"
                     /collection_date="2014-05-08"
                     /collected_by="AgBiome"
WGS         NTSG01000001-NTSG01000063
WGS_SCAFLD  NZ_NTSG01000001-NZ_NTSG01000063
//
LOCUS       NZ_FOWC01000000      9873592 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Amycolatopsis rubida strain DSM 44637, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOWC00000000
VERSION     NZ_FOWC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05421854
            Assembly: GCF_900115345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Amycolatopsis rubida
  ORGANISM  Amycolatopsis rubida
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOWC00000000.1.
            The Amycolatopsis rubida whole genome shotgun (WGS) project has the
            project accession NZ_FOWC00000000.  This version of the project
            (01) has the accession number NZ_FOWC01000000, and consists of
            sequences FOWC01000001-FOWC01000045.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900115345.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:00:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 9,362
            CDSs (total)                      :: 9,295
            Genes (coding)                    :: 9,118
            CDSs (with protein)               :: 9,118
            Genes (RNA)                       :: 67
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 57
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 177
            CDSs (without protein)            :: 177
            Pseudo Genes (ambiguous residues) :: 0 of 177
            Pseudo Genes (frameshifted)       :: 48 of 177
            Pseudo Genes (incomplete)         :: 146 of 177
            Pseudo Genes (internal stop)      :: 8 of 177
            Pseudo Genes (multiple problems)  :: 24 of 177
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9873592
                     /organism="Amycolatopsis rubida"
                     /mol_type="genomic DNA"
                     /strain="DSM 44637"
                     /type_material="type strain of Amycolatopsis rubida"
                     /db_xref="taxon:112413"
WGS         FOWC01000001-FOWC01000045
WGS_SCAFLD  NZ_FOWC01000001-NZ_FOWC01000045
//
LOCUS       NZ_NUHR01000000      5499960 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus cereus strain AFS052902, whole genome shotgun sequencing
            project.
ACCESSION   NZ_NUHR00000000
VERSION     NZ_NUHR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07598089
            Assembly: GCF_002575275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus cereus
  ORGANISM  Bacillus cereus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 5499960)
  AUTHORS   Bleich,R.M., Grubbs,K.J., Santa Maria,K.C., Allen,S.E., Farag,S.,
            Shank,E.A. and Bowers,A.
  CONSRTM   Agbiome Team Llc
  TITLE     Large-scale bioinformatics analysis of Bacillus genomes uncovers
            conserved roles of natural products in bacterial physiology
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5499960)
  AUTHORS   Bleich,R.M., Grubbs,K.J., Santa Maria,K.C., Allen,S.E., Farag,S.,
            Shank,E.A. and Bowers,A.
  CONSRTM   Agbiome Team Llc
  TITLE     Direct Submission
  JOURNAL   Submitted (01-SEP-2017) Chemical Biology and Medicinal Chemistry,
            UNC Chapel Hill, 125 Mason Farm Rd., Chapel Hill, NC 17599, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NUHR00000000.1.
            The Bacillus cereus whole genome shotgun (WGS) project has the
            project accession NZ_NUHR00000000.  This version of the project
            (01) has the accession number NZ_NUHR01000000, and consists of
            sequences NUHR01000001-NUHR01000075.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC Assembly Cell v. 4.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 59.53x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002575275.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:00:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,698
            CDSs (total)                      :: 5,630
            Genes (coding)                    :: 5,450
            CDSs (with protein)               :: 5,450
            Genes (RNA)                       :: 68
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 180
            CDSs (without protein)            :: 180
            Pseudo Genes (ambiguous residues) :: 0 of 180
            Pseudo Genes (frameshifted)       :: 51 of 180
            Pseudo Genes (incomplete)         :: 144 of 180
            Pseudo Genes (internal stop)      :: 28 of 180
            Pseudo Genes (multiple problems)  :: 36 of 180
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5499960
                     /organism="Bacillus cereus"
                     /mol_type="genomic DNA"
                     /strain="AFS052902"
                     /isolation_source="plant core"
                     /db_xref="taxon:1396"
                     /geo_loc_name="USA: NC"
                     /collection_date="2014-04-30"
                     /collected_by="AgBiome"
WGS         NUHR01000001-NUHR01000075
WGS_SCAFLD  NZ_NUHR01000001-NZ_NUHR01000075
//
LOCUS       NZ_NFEF01000000      5778521 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus thuringiensis serovar kyushuensis strain BGSC 4U1, whole
            genome shotgun sequencing project.
ACCESSION   NZ_NFEF00000000
VERSION     NZ_NFEF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05934557
            Assembly: GCF_002147395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus thuringiensis serovar kyushuensis
  ORGANISM  Bacillus thuringiensis serovar kyushuensis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 5778521)
  AUTHORS   Zheng,J., Gao,Q., Liu,H., Peng,D., Ruan,L. and Sun,M.
  TITLE     Comparative genomics of Bacillus thuringiensis reveals a path to
            pathogens against multiple invertebrate hosts
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5778521)
  AUTHORS   Zheng,J., Gao,Q., Liu,H., Peng,D., Ruan,L. and Sun,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-OCT-2016) State Key Laboratory of Agricultural
            Microbiology, Huazhong Agricultural University, 1st Shizishan,
            Wuhan, Hubei 430070, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NFEF00000000.1.
            The Bacillus thuringiensis serovar kyushuensis whole genome shotgun
            (WGS) project has the project accession NZ_NFEF00000000.  This
            version of the project (01) has the accession number
            NZ_NFEF01000000, and consists of sequences
            NFEF01000001-NFEF01000204.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: ABySS v. 1.5.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 120.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002147395.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:00:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,185
            CDSs (total)                      :: 6,031
            Genes (coding)                    :: 5,685
            CDSs (with protein)               :: 5,685
            Genes (RNA)                       :: 154
            rRNAs                             :: 14, 15, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 12, 6 (5S, 23S)
            partial rRNAs                     :: 2, 15 (5S, 16S)
            tRNAs                             :: 114
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 346
            CDSs (without protein)            :: 346
            Pseudo Genes (ambiguous residues) :: 0 of 346
            Pseudo Genes (frameshifted)       :: 117 of 346
            Pseudo Genes (incomplete)         :: 246 of 346
            Pseudo Genes (internal stop)      :: 46 of 346
            Pseudo Genes (multiple problems)  :: 50 of 346
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5778521
                     /organism="Bacillus thuringiensis serovar kyushuensis"
                     /mol_type="genomic DNA"
                     /strain="BGSC 4U1"
                     /serotype="H11ac"
                     /serovar="kyushuensis"
                     /host="Bombyx mori"
                     /db_xref="taxon:44161"
                     /geo_loc_name="Japan"
                     /collection_date="1979"
WGS         NFEF01000001-NFEF01000204
WGS_SCAFLD  NZ_NFEF01000001-NZ_NFEF01000204
//
LOCUS       NZ_NUNU01000000      5870913 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus thuringiensis strain AFS034708, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NUNU00000000
VERSION     NZ_NUNU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07597861
            Assembly: GCF_002584205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 5870913)
  AUTHORS   Bleich,R.M., Grubbs,K.J., Santa Maria,K.C., Allen,S.E., Farag,S.,
            Shank,E.A. and Bowers,A.
  CONSRTM   Agbiome Team Llc
  TITLE     Large-scale bioinformatics analysis of Bacillus genomes uncovers
            conserved roles of natural products in bacterial physiology
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5870913)
  AUTHORS   Bleich,R.M., Grubbs,K.J., Santa Maria,K.C., Allen,S.E., Farag,S.,
            Shank,E.A. and Bowers,A.
  CONSRTM   Agbiome Team Llc
  TITLE     Direct Submission
  JOURNAL   Submitted (01-SEP-2017) Chemical Biology and Medicinal Chemistry,
            UNC Chapel Hill, 125 Mason Farm Rd., Chapel Hill, NC 17599, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NUNU00000000.1.
            The Bacillus thuringiensis whole genome shotgun (WGS) project has
            the project accession NZ_NUNU00000000.  This version of the project
            (01) has the accession number NZ_NUNU01000000, and consists of
            sequences NUNU01000001-NUNU01000292.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC Assembly Cell v. 4.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 46.24x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002584205.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:03:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,175
            CDSs (total)                      :: 6,093
            Genes (coding)                    :: 5,768
            CDSs (with protein)               :: 5,768
            Genes (RNA)                       :: 82
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 325
            CDSs (without protein)            :: 325
            Pseudo Genes (ambiguous residues) :: 0 of 325
            Pseudo Genes (frameshifted)       :: 134 of 325
            Pseudo Genes (incomplete)         :: 208 of 325
            Pseudo Genes (internal stop)      :: 67 of 325
            Pseudo Genes (multiple problems)  :: 68 of 325
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5870913
                     /organism="Bacillus thuringiensis"
                     /mol_type="genomic DNA"
                     /strain="AFS034708"
                     /isolation_source="plant core"
                     /db_xref="taxon:1428"
                     /geo_loc_name="USA: NC"
                     /collection_date="2014-04-21"
                     /collected_by="AgBiome"
WGS         NUNU01000001-NUNU01000292
WGS_SCAFLD  NZ_NUNU01000001-NZ_NUNU01000292
//
LOCUS       NZ_NFCQ01000000      6216950 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus thuringiensis serovar japonensis strain BGSC 4AT1, whole
            genome shotgun sequencing project.
ACCESSION   NZ_NFCQ00000000
VERSION     NZ_NFCQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05934505
            Assembly: GCF_002146545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus thuringiensis serovar japonensis
  ORGANISM  Bacillus thuringiensis serovar japonensis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 6216950)
  AUTHORS   Zheng,J., Gao,Q., Liu,H., Peng,D., Ruan,L. and Sun,M.
  TITLE     Comparative genomics of Bacillus thuringiensis reveals a path to
            pathogens against multiple invertebrate hosts
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6216950)
  AUTHORS   Zheng,J., Gao,Q., Liu,H., Peng,D., Ruan,L. and Sun,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-OCT-2016) State Key Laboratory of Agricultural
            Microbiology, Huazhong Agricultural University, 1st Shizishan,
            Wuhan, Hubei 430070, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NFCQ00000000.1.
            The Bacillus thuringiensis serovar japonensis whole genome shotgun
            (WGS) project has the project accession NZ_NFCQ00000000.  This
            version of the project (01) has the accession number
            NZ_NFCQ01000000, and consists of sequences
            NFCQ01000001-NFCQ01000078.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: ABySS v. 1.5.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 120.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002146545.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:03:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,363
            CDSs (total)                      :: 6,231
            Genes (coding)                    :: 5,924
            CDSs (with protein)               :: 5,924
            Genes (RNA)                       :: 132
            rRNAs                             :: 12, 12, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 10 (5S)
            partial rRNAs                     :: 2, 12, 7 (5S, 16S, 23S)
            tRNAs                             :: 96
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 307
            CDSs (without protein)            :: 307
            Pseudo Genes (ambiguous residues) :: 0 of 307
            Pseudo Genes (frameshifted)       :: 114 of 307
            Pseudo Genes (incomplete)         :: 226 of 307
            Pseudo Genes (internal stop)      :: 74 of 307
            Pseudo Genes (multiple problems)  :: 85 of 307
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6216950
                     /organism="Bacillus thuringiensis serovar japonensis"
                     /mol_type="genomic DNA"
                     /strain="BGSC 4AT1"
                     /serotype="H23"
                     /serovar="japonensis"
                     /db_xref="taxon:128936"
                     /geo_loc_name="Japan"
                     /collection_date="1986"
WGS         NFCQ01000001-NFCQ01000078
WGS_SCAFLD  NZ_NFCQ01000001-NZ_NFCQ01000078
//
LOCUS       NZ_MOON01000000      6516987 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus thuringiensis serovar pirenaica strain BGSC 4BU1, whole
            genome shotgun sequencing project.
ACCESSION   NZ_MOON00000000
VERSION     NZ_MOON00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05934529
            Assembly: GCF_002147955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus thuringiensis serovar pirenaica
  ORGANISM  Bacillus thuringiensis serovar pirenaica
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 6516987)
  AUTHORS   Zheng,J., Gao,Q., Liu,H., Peng,D., Ruan,L. and Sun,M.
  TITLE     Comparative genomics of Bacillus thuringiensis reveals a path to
            pathogens against multiple invertebrate hosts
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6516987)
  AUTHORS   Zheng,J., Gao,Q., Liu,H., Peng,D., Ruan,L. and Sun,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) State Key Laboratory of Agricultural
            Microbiology, Huazhong Agricultural University, 1st Shizishan,
            Wuhan, Hubei 430070, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MOON00000000.1.
            The Bacillus thuringiensis serovar pirenaica whole genome shotgun
            (WGS) project has the project accession NZ_MOON00000000.  This
            version of the project (01) has the accession number
            NZ_MOON01000000, and consists of sequences
            MOON01000001-MOON01000118.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: ABySS v. 1.5.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 120.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002147955.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:02:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,685
            CDSs (total)                      :: 6,540
            Genes (coding)                    :: 6,182
            CDSs (with protein)               :: 6,182
            Genes (RNA)                       :: 145
            rRNAs                             :: 14, 14, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 13 (5S)
            partial rRNAs                     :: 1, 14, 8 (5S, 16S, 23S)
            tRNAs                             :: 104
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 358
            CDSs (without protein)            :: 358
            Pseudo Genes (ambiguous residues) :: 0 of 358
            Pseudo Genes (frameshifted)       :: 138 of 358
            Pseudo Genes (incomplete)         :: 249 of 358
            Pseudo Genes (internal stop)      :: 89 of 358
            Pseudo Genes (multiple problems)  :: 91 of 358
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6516987
                     /organism="Bacillus thuringiensis serovar pirenaica"
                     /mol_type="genomic DNA"
                     /strain="BGSC 4BU1"
                     /serotype="H57"
                     /serovar="pirenaica"
                     /db_xref="taxon:180863"
                     /geo_loc_name="Spain"
WGS         MOON01000001-MOON01000118
WGS_SCAFLD  NZ_MOON01000001-NZ_MOON01000118
//
LOCUS       NZ_NFEG01000000      5889832 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus thuringiensis serovar tohokuensis strain BGSC 4V1, whole
            genome shotgun sequencing project.
ACCESSION   NZ_NFEG00000000
VERSION     NZ_NFEG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05934558
            Assembly: GCF_002147425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus thuringiensis serovar tohokuensis
  ORGANISM  Bacillus thuringiensis serovar tohokuensis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 5889832)
  AUTHORS   Zheng,J., Gao,Q., Liu,H., Peng,D., Ruan,L. and Sun,M.
  TITLE     Comparative genomics of Bacillus thuringiensis reveals a path to
            pathogens against multiple invertebrate hosts
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5889832)
  AUTHORS   Zheng,J., Gao,Q., Liu,H., Peng,D., Ruan,L. and Sun,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-OCT-2016) State Key Laboratory of Agricultural
            Microbiology, Huazhong Agricultural University, 1st Shizishan,
            Wuhan, Hubei 430070, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NFEG00000000.1.
            The Bacillus thuringiensis serovar tohokuensis whole genome shotgun
            (WGS) project has the project accession NZ_NFEG00000000.  This
            version of the project (01) has the accession number
            NZ_NFEG01000000, and consists of sequences
            NFEG01000001-NFEG01000226.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: ABySS v. 1.5.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 120.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002147425.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:07:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,338
            CDSs (total)                      :: 6,188
            Genes (coding)                    :: 5,829
            CDSs (with protein)               :: 5,829
            Genes (RNA)                       :: 150
            rRNAs                             :: 13, 14, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 13, 5 (5S, 23S)
            partial rRNAs                     :: 14 (16S)
            tRNAs                             :: 113
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 359
            CDSs (without protein)            :: 359
            Pseudo Genes (ambiguous residues) :: 0 of 359
            Pseudo Genes (frameshifted)       :: 116 of 359
            Pseudo Genes (incomplete)         :: 261 of 359
            Pseudo Genes (internal stop)      :: 46 of 359
            Pseudo Genes (multiple problems)  :: 51 of 359
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5889832
                     /organism="Bacillus thuringiensis serovar tohokuensis"
                     /mol_type="genomic DNA"
                     /strain="BGSC 4V1"
                     /serotype="H17"
                     /serovar="tohokuensis"
                     /host="Bombyx mori"
                     /db_xref="taxon:180890"
                     /geo_loc_name="Japan"
                     /collection_date="1981"
WGS         NFEG01000001-NFEG01000226
WGS_SCAFLD  NZ_NFEG01000001-NZ_NFEG01000226
//
LOCUS       NZ_PGDR01000000      6326962 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus thuringiensis serovar japonensis strain Buibui, whole
            genome shotgun sequencing project.
ACCESSION   NZ_PGDR00000000
VERSION     NZ_PGDR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07955878
            Assembly: GCF_002911745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus thuringiensis serovar japonensis
  ORGANISM  Bacillus thuringiensis serovar japonensis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 6326962)
  AUTHORS   Meric,G., Megeiros,L., Pascoe,B., Woodcock,D.J., Mourkas,E.,
            Lamble,S., Bowden,R., Jolley,K.A., Raymond,B. and Sheppard,S.K.
  TITLE     Lineage-specific plasmid acquisition and the evolution of
            specialized pathogens in Bacillus thuringiensis and the Bacillus
            cereus group
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6326962)
  AUTHORS   Pascoe,B., Meric,G. and Sheppard,S.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-OCT-2017) Biology and Biochemistry, University of
            Bath, Claverton Down, Bath BA2 7AY, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PGDR00000000.1.
            The Bacillus thuringiensis serovar japonensis whole genome shotgun
            (WGS) project has the project accession NZ_PGDR00000000.  This
            version of the project (01) has the accession number
            NZ_PGDR01000000, and consists of sequences
            PGDR01000001-PGDR01000188.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-MAR-2013
            Assembly Method        :: Velvet v. Mar-13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002911745.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:11:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,561
            CDSs (total)                      :: 6,432
            Genes (coding)                    :: 6,028
            CDSs (with protein)               :: 6,028
            Genes (RNA)                       :: 129
            rRNAs                             :: 8, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 2, 4, 2 (5S, 16S, 23S)
            tRNAs                             :: 110
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 404
            CDSs (without protein)            :: 404
            Pseudo Genes (ambiguous residues) :: 0 of 404
            Pseudo Genes (frameshifted)       :: 156 of 404
            Pseudo Genes (incomplete)         :: 293 of 404
            Pseudo Genes (internal stop)      :: 97 of 404
            Pseudo Genes (multiple problems)  :: 117 of 404
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6326962
                     /organism="Bacillus thuringiensis serovar japonensis"
                     /mol_type="genomic DNA"
                     /strain="Buibui"
                     /serovar="japonensis"
                     /host="Coleoptera"
                     /db_xref="taxon:128936"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2013"
WGS         PGDR01000001-PGDR01000188
WGS_SCAFLD  NZ_PGDR01000001-NZ_PGDR01000188
//
LOCUS       NZ_MOXR01000000      6405686 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus thuringiensis serovar kurstaki strain BP865, whole genome
            shotgun sequencing project.
ACCESSION   NZ_MOXR00000000
VERSION     NZ_MOXR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05990349
            Assembly: GCF_001880125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus thuringiensis serovar kurstaki
  ORGANISM  Bacillus thuringiensis serovar kurstaki
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 6405686)
  AUTHORS   Jeong,H., Choi,S.-K. and Park,S.-H.
  TITLE     Genome sequence of Bacillus thuringiensis serovar kurstaki BP865
            (=KCTC 8689P)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6405686)
  AUTHORS   Jeong,H., Choi,S.-K. and Park,S.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-NOV-2016) Infectious Disease Research Center, Korea
            Research Institute of Bioscience and Biotechnology (KRIBB), 125
            Gwahak-ro, Daejeon 34141, Republic of Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MOXR00000000.1.
            The Bacillus thuringiensis serovar kurstaki whole genome shotgun
            (WGS) project has the project accession NZ_MOXR00000000.  This
            version of the project (01) has the accession number
            NZ_MOXR01000000, and consists of sequences
            MOXR01000001-MOXR01000225.
            Bacteria and source DNA available from Seung-Hwan Park (KRIBB).
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 31-OCT-2016
            Assembly Method        :: a5-miseq v. 20160825
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 496.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001880125.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:21:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,761
            CDSs (total)                      :: 6,642
            Genes (coding)                    :: 6,194
            CDSs (with protein)               :: 6,194
            Genes (RNA)                       :: 119
            rRNAs                             :: 9, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5, 1 (5S, 23S)
            tRNAs                             :: 102
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 448
            CDSs (without protein)            :: 448
            Pseudo Genes (ambiguous residues) :: 1 of 448
            Pseudo Genes (frameshifted)       :: 208 of 448
            Pseudo Genes (incomplete)         :: 271 of 448
            Pseudo Genes (internal stop)      :: 92 of 448
            Pseudo Genes (multiple problems)  :: 105 of 448
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6405686
                     /organism="Bacillus thuringiensis serovar kurstaki"
                     /mol_type="genomic DNA"
                     /strain="BP865"
                     /serovar="kurstaki"
                     /isolation_source="phylloplane"
                     /culture_collection="KCTC:8680P"
                     /db_xref="taxon:29339"
                     /geo_loc_name="South Korea"
                     /collection_date="1993"
WGS         MOXR01000001-MOXR01000225
WGS_SCAFLD  NZ_MOXR01000001-NZ_MOXR01000225
//
LOCUS       NZ_PDVK01000000      6350733 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus thuringiensis strain BR145, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PDVK00000000
VERSION     NZ_PDVK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07809248
            Assembly: GCF_002921215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 6350733)
  AUTHORS   Ricietto,A.P.S., Goncalves,K.B., Sosa-Gomez,D.R., Vilas-Boas,G.T.
            and Vilas-Boas,L.A.
  TITLE     Complete genome sequence of Bacillus thuringiensis BR145, a strain
            with insecticidal activity against Lepidopteran pests
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6350733)
  AUTHORS   Ricietto,A.P., Goncalves,K.B., Silva,C.R., Wolf,I.R., Goes,K.C.,
            Andrade,D.S., Vilas-Boas,G.T. and Vilas-Boas,L.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-OCT-2017) General Biology, State University of
            Londrina, Rodovia Celso Garcia Cid / PR445 Km380, Londrina, Parana
            10.011, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PDVK00000000.1.
            The Bacillus thuringiensis whole genome shotgun (WGS) project has
            the project accession NZ_PDVK00000000.  This version of the project
            (01) has the accession number NZ_PDVK01000000, and consists of
            sequences PDVK01000001-PDVK01000235.
            Bacteria and source DNA available from UEL BR145.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 266.36x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002921215.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:17:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,689
            CDSs (total)                      :: 6,573
            Genes (coding)                    :: 6,251
            CDSs (with protein)               :: 6,251
            Genes (RNA)                       :: 116
            rRNAs                             :: 10, 12, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 10, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 11, 8 (16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 322
            CDSs (without protein)            :: 322
            Pseudo Genes (ambiguous residues) :: 0 of 322
            Pseudo Genes (frameshifted)       :: 92 of 322
            Pseudo Genes (incomplete)         :: 249 of 322
            Pseudo Genes (internal stop)      :: 59 of 322
            Pseudo Genes (multiple problems)  :: 63 of 322
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6350733
                     /organism="Bacillus thuringiensis"
                     /mol_type="genomic DNA"
                     /strain="BR145"
                     /isolation_source="soil from soybean field"
                     /db_xref="taxon:1428"
                     /geo_loc_name="Brazil: Bela Vista do Paraiso/PR"
                     /lat_lon="23.0337 S 51.1031 W"
                     /collection_date="2010"
                     /collected_by="Ana Paula Scaramal Ricietto"
WGS         PDVK01000001-PDVK01000235
WGS_SCAFLD  NZ_PDVK01000001-NZ_PDVK01000235
//
LOCUS       NZ_NIKR01000000      4326682 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus licheniformis strain DSM 30523, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NIKR00000000
VERSION     NZ_NIKR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05583291
            Assembly: GCF_007831325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus licheniformis
  ORGANISM  Bacillus licheniformis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus.
REFERENCE   1  (bases 1 to 4326682)
  AUTHORS   Wels,M., Siezen,R.J., Johansen,E., Stuer-Lauridsen,B., Bjerre,K.
            and Nielsen,B.K.K.
  TITLE     Genome sequence analysis of >100 Bacillus licheniformis strains
            suggests intrinsic resistance to this species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4326682)
  AUTHORS   Wels,M., Siezen,R.J., Johansen,E., Stuer-Lauridsen,B., Bjerre,K.
            and Nielsen,B.K.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JUN-2019) Health, NIZO Food Research, Kernhemseweg 2,
            Ede 6710 BA, Netherlands
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NIKR00000000.1.
            The Bacillus licheniformis whole genome shotgun (WGS) project has
            the project accession NZ_NIKR00000000.  This version of the project
            (01) has the accession number NZ_NIKR01000000, and consists of
            sequences NIKR01000001-NIKR01000027.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 139x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007831325.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:39:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,567
            CDSs (total)                      :: 4,492
            Genes (coding)                    :: 4,383
            CDSs (with protein)               :: 4,383
            Genes (RNA)                       :: 75
            rRNAs                             :: 2 (5S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 68
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 55 of 109
            Pseudo Genes (incomplete)         :: 59 of 109
            Pseudo Genes (internal stop)      :: 12 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4326682
                     /organism="Bacillus licheniformis"
                     /mol_type="genomic DNA"
                     /strain="DSM 30523"
                     /db_xref="taxon:1402"
WGS         NIKR01000001-NIKR01000027
WGS_SCAFLD  NZ_NIKR01000001-NZ_NIKR01000027
//
LOCUS       NZ_NIKD01000000      4280269 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus licheniformis strain SG252, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NIKD00000000
VERSION     NZ_NIKD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05583305
            Assembly: GCF_007831015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus licheniformis
  ORGANISM  Bacillus licheniformis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus.
REFERENCE   1  (bases 1 to 4280269)
  AUTHORS   Wels,M., Siezen,R.J., Johansen,E., Stuer-Lauridsen,B., Bjerre,K.
            and Nielsen,B.K.K.
  TITLE     Genome sequence analysis of >100 Bacillus licheniformis strains
            suggests intrinsic resistance to this species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4280269)
  AUTHORS   Wels,M., Siezen,R.J., Johansen,E., Stuer-Lauridsen,B., Bjerre,K.
            and Nielsen,B.K.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JUN-2019) Health, NIZO Food Research, Kernhemseweg 2,
            Ede 6710 BA, Netherlands
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NIKD00000000.1.
            The Bacillus licheniformis whole genome shotgun (WGS) project has
            the project accession NZ_NIKD00000000.  This version of the project
            (01) has the accession number NZ_NIKD01000000, and consists of
            sequences NIKD01000001-NIKD01000025.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007831015.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:42:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,524
            CDSs (total)                      :: 4,449
            Genes (coding)                    :: 4,343
            CDSs (with protein)               :: 4,343
            Genes (RNA)                       :: 75
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 69
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 106
            CDSs (without protein)            :: 106
            Pseudo Genes (ambiguous residues) :: 0 of 106
            Pseudo Genes (frameshifted)       :: 59 of 106
            Pseudo Genes (incomplete)         :: 49 of 106
            Pseudo Genes (internal stop)      :: 12 of 106
            Pseudo Genes (multiple problems)  :: 14 of 106
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4280269
                     /organism="Bacillus licheniformis"
                     /mol_type="genomic DNA"
                     /strain="SG252"
                     /db_xref="taxon:1402"
WGS         NIKD01000001-NIKD01000025
WGS_SCAFLD  NZ_NIKD01000001-NZ_NIKD01000025
//
LOCUS       NZ_NIJQ01000000      4142407 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus licheniformis strain LMG 7632, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NIJQ00000000
VERSION     NZ_NIJQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05583221
            Assembly: GCF_007830795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus licheniformis
  ORGANISM  Bacillus licheniformis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus.
REFERENCE   1  (bases 1 to 4142407)
  AUTHORS   Wels,M., Siezen,R.J., Johansen,E., Stuer-Lauridsen,B., Bjerre,K.
            and Nielsen,B.K.K.
  TITLE     Genome sequence analysis of >100 Bacillus licheniformis strains
            suggests intrinsic resistance to this species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4142407)
  AUTHORS   Wels,M., Siezen,R.J., Johansen,E., Stuer-Lauridsen,B., Bjerre,K.
            and Nielsen,B.K.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JUN-2019) Health, NIZO Food Research, Kernhemseweg 2,
            Ede 6710 BA, Netherlands
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NIJQ00000000.1.
            The Bacillus licheniformis whole genome shotgun (WGS) project has
            the project accession NZ_NIJQ00000000.  This version of the project
            (01) has the accession number NZ_NIJQ01000000, and consists of
            sequences NIJQ01000001-NIJQ01000019.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 127x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007830795.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:43:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,304
            CDSs (total)                      :: 4,230
            Genes (coding)                    :: 4,128
            CDSs (with protein)               :: 4,128
            Genes (RNA)                       :: 74
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 68
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 102
            CDSs (without protein)            :: 102
            Pseudo Genes (ambiguous residues) :: 0 of 102
            Pseudo Genes (frameshifted)       :: 57 of 102
            Pseudo Genes (incomplete)         :: 44 of 102
            Pseudo Genes (internal stop)      :: 18 of 102
            Pseudo Genes (multiple problems)  :: 17 of 102
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4142407
                     /organism="Bacillus licheniformis"
                     /mol_type="genomic DNA"
                     /strain="LMG 7632"
                     /db_xref="taxon:1402"
WGS         NIJQ01000001-NIJQ01000019
WGS_SCAFLD  NZ_NIJQ01000001-NZ_NIJQ01000019
//
LOCUS       NZ_VEPQ01000000      5604011 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus cereus strain A42, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEPQ00000000
VERSION     NZ_VEPQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11962714
            Assembly: GCF_006349775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus cereus
  ORGANISM  Bacillus cereus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 5604011)
  AUTHORS   Borriss,R., Lasch,P., Thanh Tam,L.T., Luong,P.T., Phuong Thao,L.T.
            and Kim Chun,L.T.
  TITLE     Biocontrol Bacillus strains from Vietnam
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5604011)
  AUTHORS   Borriss,R., Lasch,P. and Thanh Tam,L.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2019) UG, NordReet, Marienstr. 27a, Greifswald
            17489, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEPQ00000000.1.
            The Bacillus cereus whole genome shotgun (WGS) project has the
            project accession NZ_VEPQ00000000.  This version of the project
            (01) has the accession number NZ_VEPQ01000000, and consists of
            sequences VEPQ01000001-VEPQ01000042.
            Bacteria and source DNA available from Rainer Borriss.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. DEC-2018
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 80.0x
            Sequencing Technology  :: ABI3730
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006349775.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:03:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,664
            CDSs (total)                      :: 5,604
            Genes (coding)                    :: 5,426
            CDSs (with protein)               :: 5,426
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 178
            CDSs (without protein)            :: 178
            Pseudo Genes (ambiguous residues) :: 0 of 178
            Pseudo Genes (frameshifted)       :: 60 of 178
            Pseudo Genes (incomplete)         :: 138 of 178
            Pseudo Genes (internal stop)      :: 34 of 178
            Pseudo Genes (multiple problems)  :: 41 of 178
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5604011
                     /organism="Bacillus cereus"
                     /mol_type="genomic DNA"
                     /strain="A42"
                     /isolation_source="root"
                     /host="black pepper plant"
                     /db_xref="taxon:1396"
                     /geo_loc_name="Viet Nam"
                     /collection_date="2018-05-12"
                     /collected_by="Le Thi Thanh Tam"
WGS         VEPQ01000001-VEPQ01000042
WGS_SCAFLD  NZ_VEPQ01000001-NZ_VEPQ01000042
//
LOCUS       NZ_NKAX01000000      5807774 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus cereus strain 32-6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_NKAX00000000
VERSION     NZ_NKAX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07267379
            Assembly: GCF_009935145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus cereus
  ORGANISM  Bacillus cereus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 5807774)
  AUTHORS   Cui,Y.
  TITLE     Improper usage of probiotics constitutes a potential risk of public
            health
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5807774)
  AUTHORS   Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-JUN-2017) Beijing Advanced Innovation Center for Food
            Nutrition and Human Health, College of Veterinary Medicine, China
            Agricultural University, Yuanmingyuan West Road, Beijing 100193,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NKAX00000000.1.
            The Bacillus cereus whole genome shotgun (WGS) project has the
            project accession NZ_NKAX00000000.  This version of the project
            (01) has the accession number NZ_NKAX01000000, and consists of
            sequences NKAX01000001-NKAX01000041.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 9.5.3
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 20x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009935145.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:06:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,992
            CDSs (total)                      :: 5,908
            Genes (coding)                    :: 5,724
            CDSs (with protein)               :: 5,724
            Genes (RNA)                       :: 84
            rRNAs                             :: 3 (5S)
            complete rRNAs                    :: 3 (5S)
            tRNAs                             :: 76
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 184
            CDSs (without protein)            :: 184
            Pseudo Genes (ambiguous residues) :: 0 of 184
            Pseudo Genes (frameshifted)       :: 68 of 184
            Pseudo Genes (incomplete)         :: 116 of 184
            Pseudo Genes (internal stop)      :: 49 of 184
            Pseudo Genes (multiple problems)  :: 40 of 184
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5807774
                     /organism="Bacillus cereus"
                     /mol_type="genomic DNA"
                     /strain="32-6"
                     /db_xref="taxon:1396"
                     /geo_loc_name="China"
                     /collection_date="2016-07"
                     /note="commercial probiotic used for environment"
WGS         NKAX01000001-NKAX01000041
WGS_SCAFLD  NZ_NKAX01000001-NZ_NKAX01000041
//
LOCUS       NZ_JAFKOO010000000   3824497 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus altitudinis strain 63, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAFKOO000000000
VERSION     NZ_JAFKOO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17910427
            Assembly: GCF_022803025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus altitudinis
  ORGANISM  Bacillus altitudinis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus.
REFERENCE   1  (bases 1 to 3824497)
  AUTHORS   Chaudhry,V., Kroll,S., Runge,P. and Kemen,E.
  TITLE     Arabidopsis leaf associated microbial community
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3824497)
  AUTHORS   Chaudhry,V., Kroll,S., Runge,P. and Kemen,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2021) IMIT / ZMBP Microbial Interactions,
            University of Tuebingen, Auf der Morgenstelle, 32, Tuebingen,
            Baden-Wuerttemberg 72076, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAFKOO000000000.1.
            The Bacillus altitudinis whole genome shotgun (WGS) project has the
            project accession NZ_JAFKOO000000000.  This version of the project
            (01) has the accession number NZ_JAFKOO010000000, and consists of
            sequences JAFKOO010000001-JAFKOO010000079.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 70.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022803025.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:26:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,979
            CDSs (total)                      :: 3,880
            Genes (coding)                    :: 3,843
            CDSs (with protein)               :: 3,843
            Genes (RNA)                       :: 99
            rRNAs                             :: 8, 9, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 3, 9, 3 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 8 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 4 of 37
            Pseudo Genes (multiple problems)  :: 3 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3824497
                     /organism="Bacillus altitudinis"
                     /mol_type="genomic DNA"
                     /strain="63"
                     /isolation_source="leaf"
                     /host="Arabodopsis thaliana"
                     /db_xref="taxon:293387"
                     /geo_loc_name="Germany: Tuebingen"
                     /collection_date="2018-11"
WGS         JAFKOO010000001-JAFKOO010000079
WGS_SCAFLD  NZ_JAFKOO010000001-NZ_JAFKOO010000079
//
LOCUS       NZ_NSKZ01000000      6302007 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus thuringiensis strain S2160-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NSKZ00000000
VERSION     NZ_NSKZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07563215
            Assembly: GCF_020145025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 6302007)
  AUTHORS   Fang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2017) Microbiology, Cuixi Agroindustry Ltd.,
            Zhejiang, Huangshan, Zhuji, Zhejiang 311809, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NSKZ00000000.1.
            The Bacillus thuringiensis whole genome shotgun (WGS) project has
            the project accession NZ_NSKZ00000000.  This version of the project
            (01) has the accession number NZ_NSKZ01000000, and consists of
            sequences NSKZ01000001-NSKZ01000082.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Cuixi Agroindustry Ltd.,
            Zhejiang.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 14-OCT-2014
            Assembly Method        :: SOAPdenovo v. 1.05
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 265.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_020145025.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:44:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,545
            CDSs (total)                      :: 6,481
            Genes (coding)                    :: 6,158
            CDSs (with protein)               :: 6,158
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 2 (16S, 23S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 323
            CDSs (without protein)            :: 323
            Pseudo Genes (ambiguous residues) :: 0 of 323
            Pseudo Genes (frameshifted)       :: 119 of 323
            Pseudo Genes (incomplete)         :: 228 of 323
            Pseudo Genes (internal stop)      :: 77 of 323
            Pseudo Genes (multiple problems)  :: 81 of 323
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6302007
                     /organism="Bacillus thuringiensis"
                     /mol_type="genomic DNA"
                     /strain="S2160-1"
                     /isolation_source="soil"
                     /db_xref="taxon:1428"
                     /geo_loc_name="China: Guangxi"
                     /collection_date="2007-07-20"
                     /collected_by="X.J. Fang"
                     /identified_by="X.J. Fang"
WGS         NSKZ01000001-NSKZ01000082
WGS_SCAFLD  NZ_NSKZ01000001-NZ_NSKZ01000082
//
LOCUS       NZ_JALIZJ010000000   4197946 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus paralicheniformis strain ZP1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JALIZJ000000000
VERSION     NZ_JALIZJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27282932
            Assembly: GCF_023930055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus paralicheniformis
  ORGANISM  Bacillus paralicheniformis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus.
REFERENCE   1  (bases 1 to 4197946)
  AUTHORS   Djokic,L., Stankovic,N., Galic,I., Moric,I., Radakovic,N.,
            Segan,S., Pavic,A. and Senerovic,L.
  TITLE     Novel Quorum Quenching YtnP Lactonase From Bacillus
            paralicheniformis Reduces Pseudomonas aeruginosa Virulence and
            Increases Antibiotic Efficacy in vivo
  JOURNAL   Front Microbiol 13, 906312 (2022)
   PUBMED   35722344
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4197946)
  AUTHORS   Djokic,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-APR-2022) Laboratory for Microbial Molecular Genetics
            and Ecology, Institute of Molecular Genetics and Genetic
            Engineering, Vojvode Stepe 444a, Belgrade 152 11042, Serbia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALIZJ000000000.1.
            The Bacillus paralicheniformis whole genome shotgun (WGS) project
            has the project accession NZ_JALIZJ000000000.  This version of the
            project (01) has the accession number NZ_JALIZJ010000000, and
            consists of sequences JALIZJ010000001-JALIZJ010000054.
            Bacteria and source DNA available from Laboratory for Microbial
            Molecular Genetics and Ecology, Institute of Molecular Genetics and
            Genetic Engineering, Vojvode Stepe 444a, Belgrade, Serbia.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 17-DEC-2019
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 9.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_023930055.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:48:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,289
            CDSs (total)                      :: 4,176
            Genes (coding)                    :: 4,078
            CDSs (with protein)               :: 4,078
            Genes (RNA)                       :: 113
            rRNAs                             :: 10, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 3, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 98
            CDSs (without protein)            :: 98
            Pseudo Genes (ambiguous residues) :: 0 of 98
            Pseudo Genes (frameshifted)       :: 51 of 98
            Pseudo Genes (incomplete)         :: 61 of 98
            Pseudo Genes (internal stop)      :: 10 of 98
            Pseudo Genes (multiple problems)  :: 21 of 98
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4197946
                     /organism="Bacillus paralicheniformis"
                     /mol_type="genomic DNA"
                     /strain="ZP1"
                     /isolation_source="agricultural soil"
                     /db_xref="taxon:1648923"
                     /geo_loc_name="Serbia: Belgrade"
                     /lat_lon="44.86 N 20.33 E"
                     /collection_date="2019-04-24"
WGS         JALIZJ010000001-JALIZJ010000054
WGS_SCAFLD  NZ_JALIZJ010000001-NZ_JALIZJ010000054
//
LOCUS       NZ_JARAFO010000000   4900371 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus paralicheniformis strain 3370, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JARAFO000000000
VERSION     NZ_JARAFO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32288754
            Assembly: GCF_028857355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus paralicheniformis
  ORGANISM  Bacillus paralicheniformis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus.
REFERENCE   1  (bases 1 to 4900371)
  AUTHORS   Lourenco,A., Li,F., Geraldine,D., Tobin,J.T., Butler,F., Jordan,K.
            and Obrien,T.
  TITLE     Draft Genome Sequences of Bacillus licheniformis and Bacillus
            paralicheniformis strains isolated from Irish skim milk powders
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4900371)
  AUTHORS   Lourenco,A., Li,F., Geraldine,D., Tobin,J.T., Butler,F., Jordan,K.
            and Obrien,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) Food Biosciences Department, Teagasc
            Agriculture and Food Development Authority, Teagasc Food Research
            Centre, Moorepark, Fermoy, Co. Cork P61C996, Ireland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARAFO000000000.1.
            The Bacillus paralicheniformis whole genome shotgun (WGS) project
            has the project accession NZ_JARAFO000000000.  This version of the
            project (01) has the accession number NZ_JARAFO010000000, and
            consists of sequences JARAFO010000001-JARAFO010001046.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-MAY-2021
            Assembly Method        :: SPAdes v. 3.15.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 149x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_028857355.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:52:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,701
            CDSs (total)                      :: 5,580
            Genes (coding)                    :: 5,246
            CDSs (with protein)               :: 5,246
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 9, 12 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 1, 9, 12 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 334
            CDSs (without protein)            :: 334
            Pseudo Genes (ambiguous residues) :: 0 of 334
            Pseudo Genes (frameshifted)       :: 54 of 334
            Pseudo Genes (incomplete)         :: 301 of 334
            Pseudo Genes (internal stop)      :: 13 of 334
            Pseudo Genes (multiple problems)  :: 31 of 334
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4900371
                     /organism="Bacillus paralicheniformis"
                     /mol_type="genomic DNA"
                     /strain="3370"
                     /isolation_source="Skim milk powder (medium heat)"
                     /db_xref="taxon:1648923"
                     /geo_loc_name="Ireland"
                     /collection_date="2018-08-16"
                     /collected_by="Fang"
WGS         JARAFO010000001-JARAFO010001046
WGS_SCAFLD  NZ_JARAFO010000001-NZ_JARAFO010001046
//
LOCUS       NZ_JARPPW010000000   5656366 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus cereus strain SIBC68, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARPPW000000000
VERSION     NZ_JARPPW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN33794259
            Assembly: GCF_029479165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus cereus
  ORGANISM  Bacillus cereus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 5656366)
  AUTHORS   Abdelli,M.
  TITLE     Genetic diversity of Bacillus cereus sensu lato isolates from
            Slovenia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5656366)
  AUTHORS   Abdelli,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAR-2023) Biology Division, DGA CBRN Defence Center,
            5 rue Lavoisier, Vert-le-Petit 91710, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARPPW000000000.1.
            The Bacillus cereus whole genome shotgun (WGS) project has the
            project accession NZ_JARPPW000000000.  This version of the project
            (01) has the accession number NZ_JARPPW010000000, and consists of
            sequences JARPPW010000001-JARPPW010000092.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 17-JAN-2022
            Assembly Method        :: SPAdes v. v3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 115x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029479165.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:10:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,946
            CDSs (total)                      :: 5,817
            Genes (coding)                    :: 5,634
            CDSs (with protein)               :: 5,634
            Genes (RNA)                       :: 129
            rRNAs                             :: 14, 13, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 14, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 12, 6 (16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 183
            CDSs (without protein)            :: 183
            Pseudo Genes (ambiguous residues) :: 0 of 183
            Pseudo Genes (frameshifted)       :: 59 of 183
            Pseudo Genes (incomplete)         :: 136 of 183
            Pseudo Genes (internal stop)      :: 23 of 183
            Pseudo Genes (multiple problems)  :: 31 of 183
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5656366
                     /organism="Bacillus cereus"
                     /mol_type="genomic DNA"
                     /strain="SIBC68"
                     /isolation_source="Well water"
                     /db_xref="taxon:1396"
                     /geo_loc_name="Slovenia"
                     /collection_date="2012-04-16"
                     /collected_by="University of Ljubljana"
WGS         JARPPW010000001-JARPPW010000092
WGS_SCAFLD  NZ_JARPPW010000001-NZ_JARPPW010000092
//
LOCUS       NZ_JBBPIB010000000   3736651 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Bacillus safensis strain GMA1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBPIB000000000
VERSION     NZ_JBBPIB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40602171
            Assembly: GCF_038039725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus safensis
  ORGANISM  Bacillus safensis
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Bacillus.
REFERENCE   1  (bases 1 to 3736651)
  AUTHORS   Bustos-Jaimes,I.
  TITLE     Enzyme prospection of Bacillus safensis GMA1
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3736651)
  AUTHORS   Bustos-Jaimes,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAR-2024) Biochemistry, Universidad Nacional Autonoma
            de Mexico, Facultad de Medicina, Av. Universidad 3000, Coyoacan,
            CDMX 04510, Mexico
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBPIB000000000.1.
            The Bacillus safensis whole genome shotgun (WGS) project has the
            project accession NZ_JBBPIB000000000.  This version of the project
            (01) has the accession number NZ_JBBPIB010000000, and consists of
            sequences JBBPIB010000001-JBBPIB010000036.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from I Bustos-Jaimes, LFQIP,
            Facultad de Medicina, Mexico City, Mexico.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 68.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038039725.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:21:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,852
            CDSs (total)                      :: 3,742
            Genes (coding)                    :: 3,703
            CDSs (with protein)               :: 3,703
            Genes (RNA)                       :: 110
            rRNAs                             :: 9, 10, 12 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            partial rRNAs                     :: 4, 9, 12 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 18 of 39
            Pseudo Genes (incomplete)         :: 24 of 39
            Pseudo Genes (internal stop)      :: 5 of 39
            Pseudo Genes (multiple problems)  :: 8 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3736651
                     /organism="Bacillus safensis"
                     /mol_type="genomic DNA"
                     /strain="GMA1"
                     /isolation_source="hot springs"
                     /db_xref="taxon:561879"
                     /geo_loc_name="Mexico: Michoacn, Los Azufres"
                     /collection_date="1994-08"
WGS         JBBPIB010000001-JBBPIB010000036
WGS_SCAFLD  NZ_JBBPIB010000001-NZ_JBBPIB010000036
//
LOCUS       NZ_AQKI01000000      3294937 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis Uk24/06, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AQKI00000000
VERSION     NZ_AQKI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00811221
            Assembly: GCF_000370785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis Uk24/06
  ORGANISM  Brucella melitensis Uk24/06
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3294937)
  AUTHORS   Ward,D., Whatmore,A., Skuce,R., Walker,B., Young,S.K., Zeng,Q.,
            Gargeya,S., Fitzgerald,M., Haas,B., Abouelleil,A., Alvarado,L.,
            Arachchi,H.M., Berlin,A.M., Chapman,S.B., Dewar,J., Goldberg,J.,
            Griggs,A., Gujja,S., Hansen,M., Howarth,C., Imamovic,A.,
            Larimer,J., McCowan,C., Murphy,C., Neiman,D., Pearson,M.,
            Priest,M., Roberts,A., Saif,S., Shea,T., Sisk,P., Sykes,S.,
            Wortman,J., Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genome Sequencing Platform, The Broad Institute
            Genome Sequencing Center for Infectious Disease
  TITLE     The Genome Sequence of Brucella melitensis Uk24/06
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3294937)
  AUTHORS   Ward,D., Whatmore,A., Skuce,R., Walker,B., Young,S.K., Zeng,Q.,
            Gargeya,S., Fitzgerald,M., Haas,B., Abouelleil,A., Alvarado,L.,
            Arachchi,H.M., Berlin,A.M., Chapman,S.B., Dewar,J., Goldberg,J.,
            Griggs,A., Gujja,S., Hansen,M., Howarth,C., Imamovic,A.,
            Larimer,J., McCowan,C., Murphy,C., Neiman,D., Pearson,M.,
            Priest,M., Roberts,A., Saif,S., Shea,T., Sisk,P., Sykes,S.,
            Wortman,J., Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genome Sequencing Platform, The Broad Institute
            Genome Sequencing Center for Infectious Disease
  TITLE     Direct Submission
  JOURNAL   Submitted (13-DEC-2012) Broad Institute of MIT and Harvard, 7
            Cambridge Center, Cambridge, MA 02142, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AQKI00000000.1.
            The Brucella melitensis Uk24/06 whole genome shotgun (WGS) project
            has the project accession NZ_AQKI00000000.  This version of the
            project (01) has the accession number NZ_AQKI01000000, and consists
            of sequences AQKI01000001-AQKI01000008.
            Please be aware that the annotation is done automatically with
            little or no manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: allpaths v. R41689
            Assembly Name         :: Bruc_meli_Uk24_06_V1
            Genome Coverage       :: 69.0x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000370785.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:31:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,239
            CDSs (total)                      :: 3,177
            Genes (coding)                    :: 3,000
            CDSs (with protein)               :: 3,000
            Genes (RNA)                       :: 62
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 177
            CDSs (without protein)            :: 177
            Pseudo Genes (ambiguous residues) :: 0 of 177
            Pseudo Genes (frameshifted)       :: 112 of 177
            Pseudo Genes (incomplete)         :: 39 of 177
            Pseudo Genes (internal stop)      :: 45 of 177
            Pseudo Genes (multiple problems)  :: 17 of 177
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3294937
                     /organism="Brucella melitensis Uk24/06"
                     /mol_type="genomic DNA"
                     /strain="Uk24/06"
                     /host="Homo sapiens"
                     /db_xref="taxon:1160222"
                     /geo_loc_name="Nigeria"
                     /collection_date="2006"
WGS         AQKI01000001-AQKI01000008
WGS_SCAFLD  NZ_KB850589-NZ_KB850595
//
LOCUS       NZ_ACOR01000000      3277197 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella abortus str. 2308 A, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ACOR00000000
VERSION     NZ_ACOR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02472082
            Assembly: GCF_000182625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella abortus str. 2308 A
  ORGANISM  Brucella abortus str. 2308 A
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3277197)
  AUTHORS   Setubal,J.C., Boyle,S., Crasta,O.R., Gillespie,J.J., Kenyon,R.W.,
            Lu,J., Mane,S., Nagrani,S., Shallom,J.M., Shallom,S., Shukla,M.,
            Snyder,E.E., Sobral,B.W., Wattam,A.R., Will,R., Williams,K.,
            Yoo,H., Munk,C., Tapia,R., Green,L., Rogers,Y., Detter,J.C.,
            Bruce,D. and Brettin,T.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAY-2009) The Pathosystems Resource Integration
            Center (PATRIC), Virginia Bioinformatics Institute at Virginia
            Polytechnic Institute and State University, Bioinformatics I,
            Washington Street, Blacksburg, VA 24061, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ACOR00000000.1.
            The Brucella abortus str. 2308 A whole genome shotgun (WGS) project
            has the project accession NZ_ACOR00000000.  This version of the
            project (01) has the accession number NZ_ACOR01000000, and consists
            of sequences ACOR01000001-ACOR01000009.
            Draft sequencing and assembly of Brucella abortus 2308 isolate A
            was performed  at Los Alamos National Laboratory, Los Alamos, NM
            (LANL, http://www.lanl.gov).  Sequencing was funded by Intelligence
            Technology Innovation Center.
            Annotation and database submission were carried out by the
            Pathosystems Resource Integration Center, Blacksburg, VA (PATRIC,
            http://patric.vbi.vt.edu), a Bioinformatics Resource Center
            supported by the NIH/NIAID.
            Source available from: Tom Brettin (brettin@lanl.gov)
            Sequencing Method: WGS and clone-based
            Genome Coverage: 13x
            Sequencing Technology: ABI.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000182625.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:39:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,225
            CDSs (total)                      :: 3,161
            Genes (coding)                    :: 2,978
            CDSs (with protein)               :: 2,978
            Genes (RNA)                       :: 64
            rRNAs                             :: 3, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 183
            CDSs (without protein)            :: 183
            Pseudo Genes (ambiguous residues) :: 0 of 183
            Pseudo Genes (frameshifted)       :: 125 of 183
            Pseudo Genes (incomplete)         :: 46 of 183
            Pseudo Genes (internal stop)      :: 37 of 183
            Pseudo Genes (multiple problems)  :: 23 of 183
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3277197
                     /organism="Brucella abortus str. 2308 A"
                     /mol_type="genomic DNA"
                     /strain="2308 A"
                     /isolate="A"
                     /db_xref="taxon:641140"
WGS         ACOR01000001-ACOR01000009
WGS_SCAFLD  NZ_ACOR01000001-NZ_ACOR01000009
//
LOCUS       NZ_LITW01000000      3266812 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella abortus strain 12183, whole genome shotgun sequencing
            project.
ACCESSION   NZ_LITW00000000
VERSION     NZ_LITW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03965479
            Assembly: GCF_001401945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella abortus (Brucella melitensis biovar Abortus)
  ORGANISM  Brucella abortus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3266812)
  AUTHORS   Garofolo,G., Foster,J.T., Drees,K., Zilli,K., Platone,I.,
            Ancora,M., Camma,C., De Massis,F., Calistri,P. and Di Giannatale,E.
  TITLE     Genome Sequences of 11 Brucella abortus Isolates from Persistently
            Infected Italian Regions
  JOURNAL   Genome Announc 3 (6), e01402-15 (2015)
   PUBMED   26679575
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3266812)
  AUTHORS   Drees,K., Garofolo,G. and Foster,J.
  TITLE     Phylogeny of Brucella abortus in Italy
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 3266812)
  AUTHORS   Drees,K., Garofolo,G. and Foster,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2015) Molecular, Cellular, & Biomedical Sciences,
            University of New Hampshire, 46 College Rd, Durham, NH 03823, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LITW00000000.1.
            The Brucella abortus whole genome shotgun (WGS) project has the
            project accession NZ_LITW00000000.  This version of the project
            (01) has the accession number NZ_LITW01000000, and consists of
            sequences LITW01000001-LITW01000014.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2015
            Assembly Method        :: SPAdes v. 3.0.0; pilon v. 1.8; sspace v.
                                      3.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 135.25x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001401945.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:49:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,229
            CDSs (total)                      :: 3,167
            Genes (coding)                    :: 2,985
            CDSs (with protein)               :: 2,985
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 182
            CDSs (without protein)            :: 182
            Pseudo Genes (ambiguous residues) :: 0 of 182
            Pseudo Genes (frameshifted)       :: 129 of 182
            Pseudo Genes (incomplete)         :: 41 of 182
            Pseudo Genes (internal stop)      :: 34 of 182
            Pseudo Genes (multiple problems)  :: 20 of 182
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3266812
                     /organism="Brucella abortus"
                     /mol_type="genomic DNA"
                     /strain="12183"
                     /isolation_source="spleen, lymph nodes"
                     /host="cattle"
                     /db_xref="taxon:235"
                     /geo_loc_name="Italy: Campania, Salerno, Corleto Monforte"
                     /lat_lon="40.43 N 15.37 E"
                     /collection_date="2011"
                     /collected_by="Giuliano Garofolo"
                     /biovar="3"
WGS         LITW01000001-LITW01000014
WGS_SCAFLD  NZ_LITW01000001-NZ_LITW01000014
//
LOCUS       NZ_AQKF01000000      3295572 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis UK14/06, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AQKF00000000
VERSION     NZ_AQKF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00811216
            Assembly: GCF_000370725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis UK14/06
  ORGANISM  Brucella melitensis UK14/06
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3295572)
  AUTHORS   Ward,D., Whatmore,A., Skuce,R., Walker,B., Young,S.K., Zeng,Q.,
            Gargeya,S., Fitzgerald,M., Haas,B., Abouelleil,A., Alvarado,L.,
            Arachchi,H.M., Berlin,A.M., Chapman,S.B., Dewar,J., Goldberg,J.,
            Griggs,A., Gujja,S., Hansen,M., Howarth,C., Imamovic,A.,
            Larimer,J., McCowan,C., Murphy,C., Neiman,D., Pearson,M.,
            Priest,M., Roberts,A., Saif,S., Shea,T., Sisk,P., Sykes,S.,
            Wortman,J., Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genome Sequencing Platform, The Broad Institute
            Genome Sequencing Center for Infectious Disease
  TITLE     The Genome Sequence of Brucella melitensis UK14/06
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3295572)
  AUTHORS   Ward,D., Whatmore,A., Skuce,R., Walker,B., Young,S.K., Zeng,Q.,
            Gargeya,S., Fitzgerald,M., Haas,B., Abouelleil,A., Alvarado,L.,
            Arachchi,H.M., Berlin,A.M., Chapman,S.B., Dewar,J., Goldberg,J.,
            Griggs,A., Gujja,S., Hansen,M., Howarth,C., Imamovic,A.,
            Larimer,J., McCowan,C., Murphy,C., Neiman,D., Pearson,M.,
            Priest,M., Roberts,A., Saif,S., Shea,T., Sisk,P., Sykes,S.,
            Wortman,J., Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genome Sequencing Platform, The Broad Institute
            Genome Sequencing Center for Infectious Disease
  TITLE     Direct Submission
  JOURNAL   Submitted (13-DEC-2012) Broad Institute of MIT and Harvard, 7
            Cambridge Center, Cambridge, MA 02142, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AQKF00000000.1.
            The Brucella melitensis UK14/06 whole genome shotgun (WGS) project
            has the project accession NZ_AQKF00000000.  This version of the
            project (01) has the accession number NZ_AQKF01000000, and consists
            of sequences AQKF01000001-AQKF01000008.
            Please be aware that the annotation is done automatically with
            little or no manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: allpaths v. R41689
            Assembly Name         :: Bruc_meli_UK14_06_V1
            Genome Coverage       :: 226.0x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000370725.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:42:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,240
            CDSs (total)                      :: 3,177
            Genes (coding)                    :: 2,998
            CDSs (with protein)               :: 2,998
            Genes (RNA)                       :: 63
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 179
            CDSs (without protein)            :: 179
            Pseudo Genes (ambiguous residues) :: 0 of 179
            Pseudo Genes (frameshifted)       :: 117 of 179
            Pseudo Genes (incomplete)         :: 37 of 179
            Pseudo Genes (internal stop)      :: 43 of 179
            Pseudo Genes (multiple problems)  :: 16 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3295572
                     /organism="Brucella melitensis UK14/06"
                     /mol_type="genomic DNA"
                     /strain="UK14/06"
                     /host="Homo sapiens"
                     /db_xref="taxon:1160217"
                     /geo_loc_name="Somalia"
                     /collection_date="2006"
WGS         AQKF01000001-AQKF01000008
WGS_SCAFLD  NZ_KB850576-NZ_KB850582
//
LOCUS       NZ_JWAO01000000      8615690 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia cepacia strain 1167_BCEN, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JWAO00000000
VERSION     NZ_JWAO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03197124
            Assembly: GCF_001053975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia cepacia
  ORGANISM  Burkholderia cepacia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 8615690)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8615690)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWAO00000000.1.
            The Burkholderia cepacia whole genome shotgun (WGS) project has the
            project accession NZ_JWAO00000000.  This version of the project
            (01) has the accession number NZ_JWAO01000000, and consists of
            sequences JWAO01000001-JWAO01000824.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            The organism was changed from 'Burkholderia cenocepacia' to
            'Burkholderia cepacia' in July 2016.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_001053975.1
            Current Name        :: Burkholderia cepacia
            Previous Name       :: Burkholderia cenocepacia
            Date Updated        :: 2016-07-12
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_001528845.1
            A1 Name             :: Burkholderia cepacia
            A1 ANI              :: 99.9681%
            A1 Query Coverage   :: 95%
            A1 Subject Coverage :: 97%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_000333135.2
            A2 Name             :: Burkholderia cenocepacia
            A2 ANI              :: 91.96648%
            A2 Query Coverage   :: 68%
            A2 Subject Coverage :: 74%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 24x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001053975.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:24:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,523
            CDSs (total)                      :: 8,485
            Genes (coding)                    :: 8,149
            CDSs (with protein)               :: 8,149
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 336
            CDSs (without protein)            :: 336
            Pseudo Genes (ambiguous residues) :: 0 of 336
            Pseudo Genes (frameshifted)       :: 36 of 336
            Pseudo Genes (incomplete)         :: 317 of 336
            Pseudo Genes (internal stop)      :: 15 of 336
            Pseudo Genes (multiple problems)  :: 29 of 336
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8615690
                     /organism="Burkholderia cepacia"
                     /mol_type="genomic DNA"
                     /strain="1167_BCEN"
                     /host="Homo sapiens"
                     /db_xref="taxon:292"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JWAO01000001-JWAO01000824
WGS_SCAFLD  NZ_JWAO01000001-NZ_JWAO01000824
//
LOCUS       NZ_JWAD01000000      8608782 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia cepacia strain 1178_BCEN, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JWAD00000000
VERSION     NZ_JWAD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03197135
            Assembly: GCF_001052915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia cepacia
  ORGANISM  Burkholderia cepacia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 8608782)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8608782)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWAD00000000.1.
            The Burkholderia cepacia whole genome shotgun (WGS) project has the
            project accession NZ_JWAD00000000.  This version of the project
            (01) has the accession number NZ_JWAD01000000, and consists of
            sequences JWAD01000001-JWAD01001071.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            The organism was changed from 'Burkholderia cenocepacia' to
            'Burkholderia cepacia' in July 2016.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_001052915.1
            Current Name        :: Burkholderia cepacia
            Previous Name       :: Burkholderia cenocepacia
            Date Updated        :: 2016-07-12
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_000473485.1
            A1 Name             :: Burkholderia cepacia
            A1 ANI              :: 99.96999%
            A1 Query Coverage   :: 95%
            A1 Subject Coverage :: 95%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_000333135.2
            A2 Name             :: Burkholderia cenocepacia
            A2 ANI              :: 91.97363%
            A2 Query Coverage   :: 68%
            A2 Subject Coverage :: 74%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 38x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001052915.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:30:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,687
            CDSs (total)                      :: 8,649
            Genes (coding)                    :: 8,228
            CDSs (with protein)               :: 8,228
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 421
            CDSs (without protein)            :: 421
            Pseudo Genes (ambiguous residues) :: 0 of 421
            Pseudo Genes (frameshifted)       :: 36 of 421
            Pseudo Genes (incomplete)         :: 402 of 421
            Pseudo Genes (internal stop)      :: 16 of 421
            Pseudo Genes (multiple problems)  :: 29 of 421
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8608782
                     /organism="Burkholderia cepacia"
                     /mol_type="genomic DNA"
                     /strain="1178_BCEN"
                     /host="Homo sapiens"
                     /db_xref="taxon:292"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JWAD01000001-JWAD01001071
WGS_SCAFLD  NZ_JWAD01000001-NZ_JWAD01001071
//
LOCUS       NZ_LITZ01000000      3267534 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella abortus strain 3272, whole genome shotgun sequencing
            project.
ACCESSION   NZ_LITZ00000000
VERSION     NZ_LITZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03965482
            Assembly: GCF_001402025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella abortus (Brucella melitensis biovar Abortus)
  ORGANISM  Brucella abortus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3267534)
  AUTHORS   Garofolo,G., Foster,J.T., Drees,K., Zilli,K., Platone,I.,
            Ancora,M., Camma,C., De Massis,F., Calistri,P. and Di Giannatale,E.
  TITLE     Genome Sequences of 11 Brucella abortus Isolates from Persistently
            Infected Italian Regions
  JOURNAL   Genome Announc 3 (6), e01402-15 (2015)
   PUBMED   26679575
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3267534)
  AUTHORS   Garofolo,G., Foster,J.T., Drees,K.P., Zilli,K., Platone,I.,
            Ancora,M., Abass,A., De Massis,F., Tittarelli,M. and Di
            Giannatale,E.
  TITLE     Genome sequences of eleven Brucella abortus isolates from
            persistent brucellosis regions in Italy
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 3267534)
  AUTHORS   Drees,K., Garofolo,G. and Foster,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2015) Molecular, Cellular, & Biomedical Sciences,
            University of New Hampshire, 46 College Rd, Durham, NH 03824, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LITZ00000000.1.
            The Brucella abortus whole genome shotgun (WGS) project has the
            project accession NZ_LITZ00000000.  This version of the project
            (01) has the accession number NZ_LITZ01000000, and consists of
            sequences LITZ01000001-LITZ01000019.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2015
            Assembly Method        :: SPAdes v. 3.0.0; Pilon v. 1.8; SSPACE v.
                                      3.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 59.3x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001402025.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:49:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,234
            CDSs (total)                      :: 3,175
            Genes (coding)                    :: 2,991
            CDSs (with protein)               :: 2,991
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 184
            CDSs (without protein)            :: 184
            Pseudo Genes (ambiguous residues) :: 0 of 184
            Pseudo Genes (frameshifted)       :: 122 of 184
            Pseudo Genes (incomplete)         :: 53 of 184
            Pseudo Genes (internal stop)      :: 31 of 184
            Pseudo Genes (multiple problems)  :: 20 of 184
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3267534
                     /organism="Brucella abortus"
                     /mol_type="genomic DNA"
                     /strain="3272"
                     /isolation_source="spleen, lymph nodes"
                     /host="cattle"
                     /db_xref="taxon:235"
                     /geo_loc_name="Italy: Puglia, Foggia, Apricena"
                     /lat_lon="41.77 N 15.43 E"
                     /collection_date="2011"
                     /collected_by="Giuliano Garofolo"
                     /biovar="3"
WGS         LITZ01000001-LITZ01000019
WGS_SCAFLD  NZ_LITZ01000001-NZ_LITZ01000019
//
LOCUS       NZ_JYNA01000000      8708786 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia cenocepacia strain BC-41, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JYNA00000000
VERSION     NZ_JYNA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03349523
            Assembly: GCF_002071935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia cenocepacia
  ORGANISM  Burkholderia cenocepacia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 8708786)
  AUTHORS   Patil,P.P., Mali,S., Midha,S., Gautam,V., Dash,L., Kumar,S.,
            Shastri,J., Singhal,L. and Patil,P.B.
  TITLE     Genomics Reveals a Unique Clone of Burkholderia cenocepacia
            Harboring an Actively Excising Novel Genomic Island
  JOURNAL   Front Microbiol 8, 590 (2017)
   PUBMED   28428775
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8708786)
  AUTHORS   Patil,P.P., Midha,S., Mali,S., Gautam,V., Dash,L., Kumar,S.,
            Shastri,J., Singhal,L. and Patil,P.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2015) Bacterial Genomics and Evolution
            Laboratory, CSIR-Institute of Microbial Technology, Sector 39A,
            Chandigarh 160036, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JYNA00000000.1.
            The Burkholderia cenocepacia whole genome shotgun (WGS) project has
            the project accession NZ_JYNA00000000.  This version of the project
            (01) has the accession number NZ_JYNA01000000, and consists of
            sequences JYNA01000001-JYNA01000275.
            Source DNA available from Bacterial Genomics and Evolutionary
            Laboratory, CSIR-Institute of Microbial Technology, Chandigarh,
            India and Department of Medical Microbiology, Post Graduate
            Institute of Medical Education and Research (PGIMER), Chandigarh,
            India.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7.5
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 125.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002071935.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:11:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,238
            CDSs (total)                      :: 8,167
            Genes (coding)                    :: 7,976
            CDSs (with protein)               :: 7,976
            Genes (RNA)                       :: 71
            rRNAs                             :: 5, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 191
            CDSs (without protein)            :: 191
            Pseudo Genes (ambiguous residues) :: 0 of 191
            Pseudo Genes (frameshifted)       :: 44 of 191
            Pseudo Genes (incomplete)         :: 164 of 191
            Pseudo Genes (internal stop)      :: 12 of 191
            Pseudo Genes (multiple problems)  :: 26 of 191
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8708786
                     /organism="Burkholderia cenocepacia"
                     /mol_type="genomic DNA"
                     /strain="BC-41"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:95486"
                     /geo_loc_name="India"
                     /collection_date="2013"
WGS         JYNA01000001-JYNA01000275
WGS_SCAFLD  NZ_JYNA01000001-NZ_JYNA01000275
//
LOCUS       NZ_WSSO01000000      3287364 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain HB1526, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WSSO00000000
VERSION     NZ_WSSO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13567310
            Assembly: GCF_009789345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3287364)
  AUTHORS   Sun,M., Jing,Z., Di,D., Yan,H., Zhang,Z., Xu,Q., Zhang,X., Wang,X.,
            Ni,B., Sun,X., Yan,C., Yang,Z., Tian,L., Li,J. and Fan,W.
  TITLE     Multiple Locus Variable-Number Tandem-Repeat and Single-Nucleotide
            Polymorphism-Based Brucella Typing Reveals Multiple Lineages in
            Brucella melitensis Currently Endemic in China
  JOURNAL   Front Vet Sci 4, 215 (2017)
   PUBMED   29312964
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3287364)
  AUTHORS   Sun,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2019) Laboratory of Zoonoses, Chinese Animal
            Health and Epidemiology Center, No. 369 Nanjing Road, Qingdao,
            Shandong 266032, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WSSO00000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_WSSO00000000.  This version of the project
            (01) has the accession number NZ_WSSO01000000, and consists of
            sequences WSSO01000001-WSSO01000027.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: AUG-2017
            Assembly Method        :: SOAPdenovo v. version 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 99x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009789345.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:45:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,240
            CDSs (total)                      :: 3,182
            Genes (coding)                    :: 3,008
            CDSs (with protein)               :: 3,008
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 174
            CDSs (without protein)            :: 174
            Pseudo Genes (ambiguous residues) :: 0 of 174
            Pseudo Genes (frameshifted)       :: 105 of 174
            Pseudo Genes (incomplete)         :: 43 of 174
            Pseudo Genes (internal stop)      :: 45 of 174
            Pseudo Genes (multiple problems)  :: 17 of 174
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3287364
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="HB1526"
                     /isolation_source="abortions"
                     /host="sheep"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Hebei"
                     /collection_date="2015-06-20"
                     /collected_by="Mingjun Sun"
WGS         WSSO01000001-WSSO01000027
WGS_SCAFLD  NZ_WSSO01000001-NZ_WSSO01000027
//
LOCUS       NZ_QVYG01000000      3288088 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain 2011.TE.11828.1.1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QVYG00000000
VERSION     NZ_QVYG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08888000
            Assembly: GCF_006506025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3288088)
  AUTHORS   Garofolo,G. and Janowicz,A.
  TITLE     Core Genome Multi Locus Sequence Typing and Single Nucleotide
            Polymorphism Analyses in the Epidemiology of Brucella melitensis
            Infections
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3288088)
  AUTHORS   Patavino,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-AUG-2018) GenPat, Istituto Zooprofilattico
            Sperimentale dell'Abruzzo e del Molise 'G. Caporale', via Campo
            Boario, Teramo, TE 64100, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QVYG00000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_QVYG00000000.  This version of the project
            (01) has the accession number NZ_QVYG01000000, and consists of
            sequences QVYG01000001-QVYG01000028.
            Bacteria available from Istituto Zooprofilattico Sperimentale
            dell'Abruzzo e del Molise 'G. Caporale'.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.11
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 147x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006506025.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:38:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,228
            CDSs (total)                      :: 3,172
            Genes (coding)                    :: 2,993
            CDSs (with protein)               :: 2,993
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 179
            CDSs (without protein)            :: 179
            Pseudo Genes (ambiguous residues) :: 0 of 179
            Pseudo Genes (frameshifted)       :: 126 of 179
            Pseudo Genes (incomplete)         :: 33 of 179
            Pseudo Genes (internal stop)      :: 37 of 179
            Pseudo Genes (multiple problems)  :: 16 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3288088
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="2011.TE.11828.1.1"
                     /host="cattle"
                     /db_xref="taxon:29459"
                     /geo_loc_name="Italy"
                     /collection_date="2011"
                     /collected_by="Istituto Zooprofilattico Sperimentale
                     dell'abruzzo e del Molise 'G. Caporale'"
WGS         QVYG01000001-QVYG01000028
WGS_SCAFLD  NZ_QVYG01000001-NZ_QVYG01000028
//
LOCUS       NZ_WSSL01000000      3287443 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain Bruxj08, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WSSL00000000
VERSION     NZ_WSSL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13567307
            Assembly: GCF_009789335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3287443)
  AUTHORS   Sun,M., Jing,Z., Di,D., Yan,H., Zhang,Z., Xu,Q., Zhang,X., Wang,X.,
            Ni,B., Sun,X., Yan,C., Yang,Z., Tian,L., Li,J. and Fan,W.
  TITLE     Multiple Locus Variable-Number Tandem-Repeat and Single-Nucleotide
            Polymorphism-Based Brucella Typing Reveals Multiple Lineages in
            Brucella melitensis Currently Endemic in China
  JOURNAL   Front Vet Sci 4, 215 (2017)
   PUBMED   29312964
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3287443)
  AUTHORS   Sun,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2019) Laboratory of Zoonoses, Chinese Animal
            Health and Epidemiology Center, No. 369 Nanjing Road, Qingdao,
            Shandong 266032, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WSSL00000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_WSSL00000000.  This version of the project
            (01) has the accession number NZ_WSSL01000000, and consists of
            sequences WSSL01000001-WSSL01000028.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: AUG-2017
            Assembly Method        :: SOAPdenovo v. version 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 99x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009789335.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:45:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,239
            CDSs (total)                      :: 3,180
            Genes (coding)                    :: 3,008
            CDSs (with protein)               :: 3,008
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 172
            CDSs (without protein)            :: 172
            Pseudo Genes (ambiguous residues) :: 0 of 172
            Pseudo Genes (frameshifted)       :: 105 of 172
            Pseudo Genes (incomplete)         :: 42 of 172
            Pseudo Genes (internal stop)      :: 44 of 172
            Pseudo Genes (multiple problems)  :: 17 of 172
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3287443
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="Bruxj08"
                     /isolation_source="abortions"
                     /host="sheep"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Xinjiang"
                     /collection_date="2011-06-08"
                     /collected_by="Mingjun Sun"
WGS         WSSL01000001-WSSL01000028
WGS_SCAFLD  NZ_WSSL01000001-NZ_WSSL01000028
//
LOCUS       NZ_LPGO01000000      6770006 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia multivorans strain MSMB1641WGS, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LPGO00000000
VERSION     NZ_LPGO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03449514
            Assembly: GCF_001531425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia multivorans
  ORGANISM  Burkholderia multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 6770006)
  AUTHORS   Sahl,J., Keim,P. and Wagner,D.
  TITLE     Expanding the genomic diversity of Burkholderia species for the
            development of highly accurate diagnostics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6770006)
  AUTHORS   Sahl,J., Keim,P. and Wagner,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2015) Center for Microbial Genetics and Genomics,
            Northern Arizona University, Building 56, 3rd Floor, Flagstaff, AZ
            86011, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LPGO00000000.1.
            The Burkholderia multivorans whole genome shotgun (WGS) project has
            the project accession NZ_LPGO00000000.  This version of the project
            (01) has the accession number NZ_LPGO01000000, and consists of
            sequences LPGO01000001-LPGO01000094.
            Source DNA available from Dr. David Wagner, Northern Arizona
            University, Flagstaff AZ.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SPAdes v. 3.5.0
            Genome Coverage       :: 72.57x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001531425.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:03:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,184
            CDSs (total)                      :: 6,119
            Genes (coding)                    :: 6,011
            CDSs (with protein)               :: 6,011
            Genes (RNA)                       :: 65
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 35 of 108
            Pseudo Genes (incomplete)         :: 85 of 108
            Pseudo Genes (internal stop)      :: 16 of 108
            Pseudo Genes (multiple problems)  :: 23 of 108
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6770006
                     /organism="Burkholderia multivorans"
                     /mol_type="genomic DNA"
                     /strain="MSMB1641WGS"
                     /isolation_source="air"
                     /db_xref="taxon:87883"
                     /geo_loc_name="Australia: Northern Territory"
                     /lat_lon="19.49 S 132.55 E"
                     /collection_date="2012"
                     /collected_by="Menzies - Mark Mayo"
WGS         LPGO01000001-LPGO01000094
WGS_SCAFLD  NZ_LPGO01000001-NZ_LPGO01000094
//
LOCUS       NZ_SNSR01000000      8121635 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia cepacia strain b6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_SNSR00000000
VERSION     NZ_SNSR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11130176
            Assembly: GCF_004374695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia cepacia
  ORGANISM  Burkholderia cepacia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 8121635)
  AUTHORS   Farzana,R. and Walsh,T.R.
  TITLE     Burkholderia cepacia outbreak
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8121635)
  AUTHORS   Farzana,R. and Walsh,T.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-MAR-2019) Medical Microbiology, Cardiff University,
            Main Hospital Building, Heath Park, Cardiff CF14 4XN, United
            Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SNSR00000000.1.
            The Burkholderia cepacia whole genome shotgun (WGS) project has the
            project accession NZ_SNSR00000000.  This version of the project
            (01) has the accession number NZ_SNSR01000000, and consists of
            sequences SNSR01000001-SNSR01000147.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-DEC-2018
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004374695.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:10:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,743
            CDSs (total)                      :: 7,666
            Genes (coding)                    :: 7,527
            CDSs (with protein)               :: 7,527
            Genes (RNA)                       :: 77
            rRNAs                             :: 3, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 139
            CDSs (without protein)            :: 139
            Pseudo Genes (ambiguous residues) :: 0 of 139
            Pseudo Genes (frameshifted)       :: 38 of 139
            Pseudo Genes (incomplete)         :: 115 of 139
            Pseudo Genes (internal stop)      :: 16 of 139
            Pseudo Genes (multiple problems)  :: 27 of 139
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8121635
                     /organism="Burkholderia cepacia"
                     /mol_type="genomic DNA"
                     /strain="b6"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:292"
                     /geo_loc_name="Bangladesh: Dhaka"
                     /collection_date="2016-11-22"
WGS         SNSR01000001-SNSR01000147
WGS_SCAFLD  NZ_SNSR01000001-NZ_SNSR01000147
//
LOCUS       NZ_PVFQ01000000      6796619 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia multivorans strain AU13919, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PVFQ00000000
VERSION     NZ_PVFQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08628006
            Assembly: GCF_002981095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia multivorans
  ORGANISM  Burkholderia multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 6796619)
  AUTHORS   Nguyen,K., Fouts,D. and Sutton,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAR-2018) Informatics Core Services, JCVI, 9605
            Medical Center Drive, Rockville, MD 20850, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PVFQ00000000.1.
            The Burkholderia multivorans whole genome shotgun (WGS) project has
            the project accession NZ_PVFQ00000000.  This version of the project
            (01) has the accession number NZ_PVFQ01000000, and consists of
            sequences PVFQ01000001-PVFQ01000101.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 129.66x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002981095.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:11:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,303
            CDSs (total)                      :: 6,242
            Genes (coding)                    :: 6,132
            CDSs (with protein)               :: 6,132
            Genes (RNA)                       :: 61
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 110
            CDSs (without protein)            :: 110
            Pseudo Genes (ambiguous residues) :: 0 of 110
            Pseudo Genes (frameshifted)       :: 36 of 110
            Pseudo Genes (incomplete)         :: 81 of 110
            Pseudo Genes (internal stop)      :: 14 of 110
            Pseudo Genes (multiple problems)  :: 19 of 110
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6796619
                     /organism="Burkholderia multivorans"
                     /mol_type="genomic DNA"
                     /strain="AU13919"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:87883"
WGS         PVFQ01000001-PVFQ01000101
WGS_SCAFLD  NZ_PVFQ01000001-NZ_PVFQ01000101
//
LOCUS       NZ_JALDAZ010000000   3289166 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain Zibo_W106, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JALDAZ000000000
VERSION     NZ_JALDAZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN26816863
            Assembly: GCF_023093775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3289166)
  AUTHORS   Qi,M.Z.
  TITLE     Brucella melitensis_Zibo_M106
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3289166)
  AUTHORS   Qi,M.Z. and Geng,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAR-2022) College of Animal Science and Veterinary
            Medicine, Shandong Agricultural University, Daizong Street, Taian,
            Shandong Province 271000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALDAZ000000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_JALDAZ000000000.  This version of the project
            (01) has the accession number NZ_JALDAZ010000000, and consists of
            sequences JALDAZ010000001-JALDAZ010000026.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 27-JUL-2021
            Assembly Method        :: SPAdes v. 3.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1379261400.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_023093775.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:27:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,235
            CDSs (total)                      :: 3,177
            Genes (coding)                    :: 3,001
            CDSs (with protein)               :: 3,001
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 176
            CDSs (without protein)            :: 176
            Pseudo Genes (ambiguous residues) :: 0 of 176
            Pseudo Genes (frameshifted)       :: 111 of 176
            Pseudo Genes (incomplete)         :: 41 of 176
            Pseudo Genes (internal stop)      :: 45 of 176
            Pseudo Genes (multiple problems)  :: 19 of 176
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3289166
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="Zibo_W106"
                     /isolation_source="farm"
                     /host="cattle"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Zibo"
                     /lat_lon="36.67 N 117.22 E"
                     /collection_date="2020-03"
                     /collected_by="Shandong Academy of Agricultural Sciences"
WGS         JALDAZ010000001-JALDAZ010000026
WGS_SCAFLD  NZ_JALDAZ010000001-NZ_JALDAZ010000026
//
LOCUS       NZ_PVFR01000000      6798406 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia multivorans strain AU14328, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PVFR00000000
VERSION     NZ_PVFR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08628005
            Assembly: GCF_002980825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia multivorans
  ORGANISM  Burkholderia multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 6798406)
  AUTHORS   Nguyen,K., Fouts,D. and Sutton,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAR-2018) Informatics Core Services, JCVI, 9605
            Medical Center Drive, Rockville, MD 20850, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PVFR00000000.1.
            The Burkholderia multivorans whole genome shotgun (WGS) project has
            the project accession NZ_PVFR00000000.  This version of the project
            (01) has the accession number NZ_PVFR01000000, and consists of
            sequences PVFR01000001-PVFR01000097.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 153.32x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002980825.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:21:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,306
            CDSs (total)                      :: 6,243
            Genes (coding)                    :: 6,133
            CDSs (with protein)               :: 6,133
            Genes (RNA)                       :: 63
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 110
            CDSs (without protein)            :: 110
            Pseudo Genes (ambiguous residues) :: 0 of 110
            Pseudo Genes (frameshifted)       :: 37 of 110
            Pseudo Genes (incomplete)         :: 81 of 110
            Pseudo Genes (internal stop)      :: 14 of 110
            Pseudo Genes (multiple problems)  :: 20 of 110
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6798406
                     /organism="Burkholderia multivorans"
                     /mol_type="genomic DNA"
                     /strain="AU14328"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:87883"
WGS         PVFR01000001-PVFR01000097
WGS_SCAFLD  NZ_PVFR01000001-NZ_PVFR01000097
//
LOCUS       NZ_FKJW01000000      6857684 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia multivorans isolate LMG 29311, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FKJW00000000
VERSION     NZ_FKJW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3876909
            Assembly: GCF_900079605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia multivorans
  ORGANISM  Burkholderia multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1
  AUTHORS   Peeters,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-APR-2016) LM-UGent, Laboratory of Microbiology, Ghent
            University, K. L. Ledeganckstraat 35, 9000 Gent, 9000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FKJW00000000.1.
            The Burkholderia multivorans whole genome shotgun (WGS) project has
            the project accession NZ_FKJW00000000.  This version of the project
            (01) has the accession number NZ_FKJW01000000, and consists of
            sequences FKJW01000001-FKJW01000006.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900079605.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:21:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,335
            CDSs (total)                      :: 6,249
            Genes (coding)                    :: 6,169
            CDSs (with protein)               :: 6,169
            Genes (RNA)                       :: 86
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 45 of 80
            Pseudo Genes (incomplete)         :: 52 of 80
            Pseudo Genes (internal stop)      :: 6 of 80
            Pseudo Genes (multiple problems)  :: 21 of 80
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6857684
                     /organism="Burkholderia multivorans"
                     /mol_type="genomic DNA"
                     /isolate="LMG 29311"
                     /isolation_source="cystic fibrosis"
                     /db_xref="taxon:87883"
                     /geo_loc_name="Canada"
                     /collection_date="1995"
WGS         FKJW01000001-FKJW01000006
WGS_SCAFLD  NZ_FKJW01000001-NZ_FKJW01000006
//
LOCUS       NZ_CADFAL010000000   7957046 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1801, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADFAL000000000
VERSION     NZ_CADFAL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503453
            Assembly: GCF_902832175.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 7957046)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADFAL000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADFAL000000000.  This version of the
            project (01) has the accession number NZ_CADFAL010000000, and
            consists of sequences CADFAL010000001-CADFAL010000097.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902832175.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:40:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,984
            CDSs (total)                      :: 6,910
            Genes (coding)                    :: 6,810
            CDSs (with protein)               :: 6,810
            Genes (RNA)                       :: 74
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 23 of 100
            Pseudo Genes (incomplete)         :: 87 of 100
            Pseudo Genes (internal stop)      :: 10 of 100
            Pseudo Genes (multiple problems)  :: 19 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7957046
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1801"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="USA"
WGS         CADFAL010000001-CADFAL010000097
WGS_SCAFLD  NZ_CADFAL010000001-NZ_CADFAL010000097
//
LOCUS       NZ_PVFT01000000      6806356 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia multivorans strain AU14371, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PVFT00000000
VERSION     NZ_PVFT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08628003
            Assembly: GCF_002980855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia multivorans
  ORGANISM  Burkholderia multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 6806356)
  AUTHORS   Nguyen,K., Fouts,D. and Sutton,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAR-2018) Informatics Core Services, JCVI, 9605
            Medical Center Drive, Rockville, MD 20850, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PVFT00000000.1.
            The Burkholderia multivorans whole genome shotgun (WGS) project has
            the project accession NZ_PVFT00000000.  This version of the project
            (01) has the accession number NZ_PVFT01000000, and consists of
            sequences PVFT01000001-PVFT01000086.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 140.98x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002980855.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:22:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,260
            CDSs (total)                      :: 6,198
            Genes (coding)                    :: 6,110
            CDSs (with protein)               :: 6,110
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 88
            CDSs (without protein)            :: 88
            Pseudo Genes (ambiguous residues) :: 0 of 88
            Pseudo Genes (frameshifted)       :: 24 of 88
            Pseudo Genes (incomplete)         :: 70 of 88
            Pseudo Genes (internal stop)      :: 11 of 88
            Pseudo Genes (multiple problems)  :: 16 of 88
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6806356
                     /organism="Burkholderia multivorans"
                     /mol_type="genomic DNA"
                     /strain="AU14371"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:87883"
WGS         PVFT01000001-PVFT01000086
WGS_SCAFLD  NZ_PVFT01000001-NZ_PVFT01000086
//
LOCUS       NZ_CADFAK010000000   7969425 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1808, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADFAK000000000
VERSION     NZ_CADFAK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503460
            Assembly: GCF_902832145.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 7969425)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADFAK000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADFAK000000000.  This version of the
            project (01) has the accession number NZ_CADFAK010000000, and
            consists of sequences CADFAK010000001-CADFAK010000122.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902832145.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:41:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,017
            CDSs (total)                      :: 6,944
            Genes (coding)                    :: 6,847
            CDSs (with protein)               :: 6,847
            Genes (RNA)                       :: 73
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 97
            CDSs (without protein)            :: 97
            Pseudo Genes (ambiguous residues) :: 0 of 97
            Pseudo Genes (frameshifted)       :: 22 of 97
            Pseudo Genes (incomplete)         :: 83 of 97
            Pseudo Genes (internal stop)      :: 10 of 97
            Pseudo Genes (multiple problems)  :: 17 of 97
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7969425
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1808"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="USA"
WGS         CADFAK010000001-CADFAK010000122
WGS_SCAFLD  NZ_CADFAK010000001-NZ_CADFAK010000122
//
LOCUS       NZ_JAQZCV010000000   3290423 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain Bru.18.22, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAQZCV000000000
VERSION     NZ_JAQZCV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32901677
            Assembly: GCF_029452695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3290423)
  AUTHORS   Ma,H.
  TITLE     Molecular Characterization and Antimicrobial Susceptibility of
            Human Brucella in Northeast China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3290423)
  AUTHORS   Ma,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2023) Chinese Academy of Agricultural Sciences,
            Changchun Veterinary Research Institute, Yujinxiang Street 573,
            Changchun 130122, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAQZCV000000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_JAQZCV000000000.  This version of the project
            (01) has the accession number NZ_JAQZCV010000000, and consists of
            sequences JAQZCV010000001-JAQZCV010000026.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029452695.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:46:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,242
            CDSs (total)                      :: 3,186
            Genes (coding)                    :: 3,012
            CDSs (with protein)               :: 3,012
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 174
            CDSs (without protein)            :: 174
            Pseudo Genes (ambiguous residues) :: 0 of 174
            Pseudo Genes (frameshifted)       :: 108 of 174
            Pseudo Genes (incomplete)         :: 41 of 174
            Pseudo Genes (internal stop)      :: 44 of 174
            Pseudo Genes (multiple problems)  :: 17 of 174
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3290423
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="Bru.18.22"
                     /host="Homo sapiens"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Harbin, Northeastern China"
                     /lat_lon="45.14 N 125.44 E"
                     /collection_date="2018-05-01"
                     /collected_by="Huijiao Xu"
WGS         JAQZCV010000001-JAQZCV010000026
WGS_SCAFLD  NZ_JAQZCV010000001-NZ_JAQZCV010000026
//
LOCUS       NZ_JAQZRU010000000   3294757 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain Bru.18.08, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAQZRU000000000
VERSION     NZ_JAQZRU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32901663
            Assembly: GCF_029452475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3294757)
  AUTHORS   Ma,H.
  TITLE     Molecular Characterization and Antimicrobial Susceptibility of
            Human Brucella in Northeast China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3294757)
  AUTHORS   Ma,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-FEB-2023) Chinese Academy of Agricultural Sciences,
            Changchun Veterinary Research Institute, Yujinxiang Street 573,
            Changchun 130122, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAQZRU000000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_JAQZRU000000000.  This version of the project
            (01) has the accession number NZ_JAQZRU010000000, and consists of
            sequences JAQZRU010000001-JAQZRU010000025.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029452475.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:50:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,244
            CDSs (total)                      :: 3,186
            Genes (coding)                    :: 3,014
            CDSs (with protein)               :: 3,014
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 172
            CDSs (without protein)            :: 172
            Pseudo Genes (ambiguous residues) :: 0 of 172
            Pseudo Genes (frameshifted)       :: 110 of 172
            Pseudo Genes (incomplete)         :: 36 of 172
            Pseudo Genes (internal stop)      :: 45 of 172
            Pseudo Genes (multiple problems)  :: 17 of 172
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3294757
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="Bru.18.08"
                     /host="Homo sapiens"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Harbin, Northeastern China"
                     /lat_lon="44.04 N 125.49 E"
                     /collection_date="2018-05-01"
                     /collected_by="Huijiao Xu"
WGS         JAQZRU010000001-JAQZRU010000025
WGS_SCAFLD  NZ_JAQZRU010000001-NZ_JAQZRU010000025
//
LOCUS       NZ_JARAOA010000000   3291288 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain Bru.18.46, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JARAOA000000000
VERSION     NZ_JARAOA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32901701
            Assembly: GCF_029453145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3291288)
  AUTHORS   Ma,H.
  TITLE     Molecular Characterization and Antimicrobial Susceptibility of
            Human Brucella in Northeast China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3291288)
  AUTHORS   Ma,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-FEB-2023) Chinese Academy of Agricultural Sciences,
            Changchun Veterinary Research Institute, Yujinxiang Street 573,
            Changchun 130122, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARAOA000000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_JARAOA000000000.  This version of the project
            (01) has the accession number NZ_JARAOA010000000, and consists of
            sequences JARAOA010000001-JARAOA010000026.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029453145.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:52:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,246
            CDSs (total)                      :: 3,188
            Genes (coding)                    :: 3,015
            CDSs (with protein)               :: 3,015
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 173
            CDSs (without protein)            :: 173
            Pseudo Genes (ambiguous residues) :: 0 of 173
            Pseudo Genes (frameshifted)       :: 111 of 173
            Pseudo Genes (incomplete)         :: 37 of 173
            Pseudo Genes (internal stop)      :: 44 of 173
            Pseudo Genes (multiple problems)  :: 17 of 173
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3291288
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="Bru.18.46"
                     /host="Homo sapiens"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Harbin, Northeastern China"
                     /lat_lon="46.04 N 125.49 E"
                     /collection_date="2018-05-01"
                     /collected_by="Huijiao Xu"
WGS         JARAOA010000001-JARAOA010000026
WGS_SCAFLD  NZ_JARAOA010000001-NZ_JARAOA010000026
//
LOCUS       NZ_JAQZCT010000000   3291900 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain Bru.18.20, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAQZCT000000000
VERSION     NZ_JAQZCT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32901675
            Assembly: GCF_029452665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3291900)
  AUTHORS   Ma,H.
  TITLE     Molecular Characterization and Antimicrobial Susceptibility of
            Human Brucella in Northeast China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3291900)
  AUTHORS   Ma,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2023) Chinese Academy of Agricultural Sciences,
            Changchun Veterinary Research Institute, Yujinxiang Street 573,
            Changchun 130122, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAQZCT000000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_JAQZCT000000000.  This version of the project
            (01) has the accession number NZ_JAQZCT010000000, and consists of
            sequences JAQZCT010000001-JAQZCT010000026.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029452665.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:51:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,242
            CDSs (total)                      :: 3,184
            Genes (coding)                    :: 3,012
            CDSs (with protein)               :: 3,012
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 172
            CDSs (without protein)            :: 172
            Pseudo Genes (ambiguous residues) :: 0 of 172
            Pseudo Genes (frameshifted)       :: 111 of 172
            Pseudo Genes (incomplete)         :: 38 of 172
            Pseudo Genes (internal stop)      :: 45 of 172
            Pseudo Genes (multiple problems)  :: 19 of 172
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3291900
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="Bru.18.20"
                     /host="Homo sapiens"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Harbin, Northeastern China"
                     /lat_lon="45.14 N 125.42 E"
                     /collection_date="2018-05-01"
                     /collected_by="Huijiao Xu"
WGS         JAQZCT010000001-JAQZCT010000026
WGS_SCAFLD  NZ_JAQZCT010000001-NZ_JAQZCT010000026
//
LOCUS       NZ_JARABH010000000   3294948 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain Bru.18.36, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JARABH000000000
VERSION     NZ_JARABH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32901691
            Assembly: GCF_029452925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3294948)
  AUTHORS   Ma,H.
  TITLE     Molecular Characterization and Antimicrobial Susceptibility of
            Human Brucella in Northeast China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3294948)
  AUTHORS   Ma,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2023) Chinese Academy of Agricultural Sciences,
            Changchun Veterinary Research Institute, Yujinxiang Street 573,
            Changchun 130122, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARABH000000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_JARABH000000000.  This version of the project
            (01) has the accession number NZ_JARABH010000000, and consists of
            sequences JARABH010000001-JARABH010000027.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029452925.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:54:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,249
            CDSs (total)                      :: 3,191
            Genes (coding)                    :: 3,015
            CDSs (with protein)               :: 3,015
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 176
            CDSs (without protein)            :: 176
            Pseudo Genes (ambiguous residues) :: 0 of 176
            Pseudo Genes (frameshifted)       :: 113 of 176
            Pseudo Genes (incomplete)         :: 39 of 176
            Pseudo Genes (internal stop)      :: 44 of 176
            Pseudo Genes (multiple problems)  :: 18 of 176
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3294948
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="Bru.18.36"
                     /host="Homo sapiens"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Harbin, Northeastern China"
                     /lat_lon="45.14 N 125.58 E"
                     /collection_date="2018-05-01"
                     /collected_by="Huijiao Xu"
WGS         JARABH010000001-JARABH010000027
WGS_SCAFLD  NZ_JARABH010000001-NZ_JARABH010000027
//
LOCUS       NZ_JARABD010000000   3296580 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain Bru.18.40, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JARABD000000000
VERSION     NZ_JARABD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32901695
            Assembly: GCF_029453025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3296580)
  AUTHORS   Ma,H.
  TITLE     Molecular Characterization and Antimicrobial Susceptibility of
            Human Brucella in Northeast China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3296580)
  AUTHORS   Ma,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2023) Chinese Academy of Agricultural Sciences,
            Changchun Veterinary Research Institute, Yujinxiang Street 573,
            Changchun 130122, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARABD000000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_JARABD000000000.  This version of the project
            (01) has the accession number NZ_JARABD010000000, and consists of
            sequences JARABD010000001-JARABD010000023.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029453025.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:53:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,245
            CDSs (total)                      :: 3,187
            Genes (coding)                    :: 3,014
            CDSs (with protein)               :: 3,014
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 173
            CDSs (without protein)            :: 173
            Pseudo Genes (ambiguous residues) :: 0 of 173
            Pseudo Genes (frameshifted)       :: 109 of 173
            Pseudo Genes (incomplete)         :: 39 of 173
            Pseudo Genes (internal stop)      :: 44 of 173
            Pseudo Genes (multiple problems)  :: 17 of 173
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3296580
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="Bru.18.40"
                     /host="Homo sapiens"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Harbin, Northeastern China"
                     /lat_lon="46.04 N 125.43 E"
                     /collection_date="2018-05-01"
                     /collected_by="Huijiao Xu"
WGS         JARABD010000001-JARABD010000023
WGS_SCAFLD  NZ_JARABD010000001-NZ_JARABD010000023
//
LOCUS       NZ_JAQZRW010000000   3291453 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain Bru.18.10, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAQZRW000000000
VERSION     NZ_JAQZRW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32901665
            Assembly: GCF_029452405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3291453)
  AUTHORS   Ma,H.
  TITLE     Molecular Characterization and Antimicrobial Susceptibility of
            Human Brucella in Northeast China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3291453)
  AUTHORS   Ma,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-FEB-2023) Chinese Academy of Agricultural Sciences,
            Changchun Veterinary Research Institute, Yujinxiang Street 573,
            Changchun 130122, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAQZRW000000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_JAQZRW000000000.  This version of the project
            (01) has the accession number NZ_JAQZRW010000000, and consists of
            sequences JAQZRW010000001-JAQZRW010000027.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029452405.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:50:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,246
            CDSs (total)                      :: 3,188
            Genes (coding)                    :: 3,015
            CDSs (with protein)               :: 3,015
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 173
            CDSs (without protein)            :: 173
            Pseudo Genes (ambiguous residues) :: 0 of 173
            Pseudo Genes (frameshifted)       :: 111 of 173
            Pseudo Genes (incomplete)         :: 38 of 173
            Pseudo Genes (internal stop)      :: 44 of 173
            Pseudo Genes (multiple problems)  :: 18 of 173
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3291453
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="Bru.18.10"
                     /host="Homo sapiens"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Harbin, Northeastern China"
                     /lat_lon="44.04 N 125.51 E"
                     /collection_date="2018-05-01"
                     /collected_by="Huijiao Xu"
WGS         JAQZRW010000001-JAQZRW010000027
WGS_SCAFLD  NZ_JAQZRW010000001-NZ_JAQZRW010000027
//
LOCUS       NZ_JAQZRQ010000000   3291169 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain Bru.18.04, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAQZRQ000000000
VERSION     NZ_JAQZRQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32901659
            Assembly: GCF_029532195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3291169)
  AUTHORS   Ma,H.
  TITLE     Epidemiology and antimicrobial susceptibility testing of human
            Brucella in northeastern China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3291169)
  AUTHORS   Ma,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2023) Chinese Academy of Agricultural Sciences,
            Changchun Veterinary Research Institute, Yujinxiang Street 573,
            Changchun 130122, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAQZRQ000000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_JAQZRQ000000000.  This version of the project
            (01) has the accession number NZ_JAQZRQ010000000, and consists of
            sequences JAQZRQ010000001-JAQZRQ010000026.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029532195.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:57:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,243
            CDSs (total)                      :: 3,185
            Genes (coding)                    :: 3,014
            CDSs (with protein)               :: 3,014
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 171
            CDSs (without protein)            :: 171
            Pseudo Genes (ambiguous residues) :: 0 of 171
            Pseudo Genes (frameshifted)       :: 109 of 171
            Pseudo Genes (incomplete)         :: 36 of 171
            Pseudo Genes (internal stop)      :: 44 of 171
            Pseudo Genes (multiple problems)  :: 16 of 171
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3291169
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="Bru.18.04"
                     /host="Homo sapiens"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Harbin, Northeastern China"
                     /lat_lon="44.04 N 125.45 E"
                     /collection_date="2018-05-01"
                     /collected_by="Huijiao Xu"
WGS         JAQZRQ010000001-JAQZRQ010000026
WGS_SCAFLD  NZ_JAQZRQ010000001-NZ_JAQZRQ010000026
//
LOCUS       NZ_JARABS010000000   3291004 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain Bru.18.41, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JARABS000000000
VERSION     NZ_JARABS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32901696
            Assembly: GCF_029453045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3291004)
  AUTHORS   Ma,H.
  TITLE     Molecular Characterization and Antimicrobial Susceptibility of
            Human Brucella in Northeast China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3291004)
  AUTHORS   Ma,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2023) Chinese Academy of Agricultural Sciences,
            Changchun Veterinary Research Institute, Yujinxiang Street 573,
            Changchun 130122, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARABS000000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_JARABS000000000.  This version of the project
            (01) has the accession number NZ_JARABS010000000, and consists of
            sequences JARABS010000001-JARABS010000027.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029453045.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:52:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,242
            CDSs (total)                      :: 3,184
            Genes (coding)                    :: 3,010
            CDSs (with protein)               :: 3,010
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 174
            CDSs (without protein)            :: 174
            Pseudo Genes (ambiguous residues) :: 0 of 174
            Pseudo Genes (frameshifted)       :: 112 of 174
            Pseudo Genes (incomplete)         :: 37 of 174
            Pseudo Genes (internal stop)      :: 44 of 174
            Pseudo Genes (multiple problems)  :: 17 of 174
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3291004
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="Bru.18.41"
                     /host="Homo sapiens"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Harbin, Northeastern China"
                     /lat_lon="46.04 N 125.44 E"
                     /collection_date="2018-05-01"
                     /collected_by="Huijiao Xu"
WGS         JARABS010000001-JARABS010000027
WGS_SCAFLD  NZ_JARABS010000001-NZ_JARABS010000027
//
LOCUS       NZ_JARABG010000000   3291307 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain Bru.18.37, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JARABG000000000
VERSION     NZ_JARABG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32901692
            Assembly: GCF_029452945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3291307)
  AUTHORS   Ma,H.
  TITLE     Molecular Characterization and Antimicrobial Susceptibility of
            Human Brucella in Northeast China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3291307)
  AUTHORS   Ma,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2023) Chinese Academy of Agricultural Sciences,
            Changchun Veterinary Research Institute, Yujinxiang Street 573,
            Changchun 130122, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARABG000000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_JARABG000000000.  This version of the project
            (01) has the accession number NZ_JARABG010000000, and consists of
            sequences JARABG010000001-JARABG010000025.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029452945.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:59:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,248
            CDSs (total)                      :: 3,190
            Genes (coding)                    :: 3,017
            CDSs (with protein)               :: 3,017
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 173
            CDSs (without protein)            :: 173
            Pseudo Genes (ambiguous residues) :: 0 of 173
            Pseudo Genes (frameshifted)       :: 110 of 173
            Pseudo Genes (incomplete)         :: 38 of 173
            Pseudo Genes (internal stop)      :: 44 of 173
            Pseudo Genes (multiple problems)  :: 17 of 173
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3291307
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="Bru.18.37"
                     /host="Homo sapiens"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Harbin, Northeastern China"
                     /lat_lon="45.14 N 125.59 E"
                     /collection_date="2018-05-01"
                     /collected_by="Huijiao Xu"
WGS         JARABG010000001-JARABG010000025
WGS_SCAFLD  NZ_JARABG010000001-NZ_JARABG010000025
//
LOCUS       NZ_SDKJ01000000      7170897 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia pseudomallei strain JW270, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SDKJ00000000
VERSION     NZ_SDKJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08384004
            Assembly: GCF_004123025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (bases 1 to 7170897)
  AUTHORS   Mounaud,S., Sutton,G. and Nguyen,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JAN-2019) Informatics Core Services, JCVI, 9605
            Medical Center Drive, Rockville, MD 20850, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SDKJ00000000.1.
            The Burkholderia pseudomallei whole genome shotgun (WGS) project
            has the project accession NZ_SDKJ00000000.  This version of the
            project (01) has the accession number NZ_SDKJ01000000, and consists
            of sequences SDKJ01000001-SDKJ01000028.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: MAY-2018
            Assembly Method        :: SPAdes v. 3.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 85.44132857x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004123025.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:03:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,483
            CDSs (total)                      :: 6,411
            Genes (coding)                    :: 6,252
            CDSs (with protein)               :: 6,252
            Genes (RNA)                       :: 72
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 159
            CDSs (without protein)            :: 159
            Pseudo Genes (ambiguous residues) :: 0 of 159
            Pseudo Genes (frameshifted)       :: 77 of 159
            Pseudo Genes (incomplete)         :: 110 of 159
            Pseudo Genes (internal stop)      :: 19 of 159
            Pseudo Genes (multiple problems)  :: 41 of 159
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7170897
                     /organism="Burkholderia pseudomallei"
                     /mol_type="genomic DNA"
                     /strain="JW270"
                     /db_xref="taxon:28450"
                     /collection_date="2009"
                     /collected_by="Jonathan Warawa, Rocky Mountain
                     Laboratories"
                     /genotype="DD503 delta wcb"
                     /note="select agent except derivative of Burkholderia
                     pseudomallei DD503"
WGS         SDKJ01000001-SDKJ01000028
WGS_SCAFLD  NZ_SDKJ01000001-NZ_SDKJ01000028
//
LOCUS       NZ_JARAOH010000000   3298213 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain Bru.18.53, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JARAOH000000000
VERSION     NZ_JARAOH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32901708
            Assembly: GCF_029453275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3298213)
  AUTHORS   Ma,H.
  TITLE     Molecular Characterization and Antimicrobial Susceptibility of
            Human Brucella in Northeast China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3298213)
  AUTHORS   Ma,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-FEB-2023) Chinese Academy of Agricultural Sciences,
            Changchun Veterinary Research Institute, Yujinxiang Street 573,
            Changchun 130122, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARAOH000000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_JARAOH000000000.  This version of the project
            (01) has the accession number NZ_JARAOH010000000, and consists of
            sequences JARAOH010000001-JARAOH010000026.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029453275.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:51:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,251
            CDSs (total)                      :: 3,193
            Genes (coding)                    :: 3,017
            CDSs (with protein)               :: 3,017
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 176
            CDSs (without protein)            :: 176
            Pseudo Genes (ambiguous residues) :: 0 of 176
            Pseudo Genes (frameshifted)       :: 112 of 176
            Pseudo Genes (incomplete)         :: 40 of 176
            Pseudo Genes (internal stop)      :: 45 of 176
            Pseudo Genes (multiple problems)  :: 18 of 176
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3298213
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="Bru.18.53"
                     /host="Homo sapiens"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Harbin, Northeastern China"
                     /lat_lon="46.04 N 125.56 E"
                     /collection_date="2018-05-01"
                     /collected_by="Huijiao Xu"
WGS         JARAOH010000001-JARAOH010000026
WGS_SCAFLD  NZ_JARAOH010000001-NZ_JARAOH010000026
//
LOCUS       NZ_JARAOC010000000   3320624 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain Bru.18.48, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JARAOC000000000
VERSION     NZ_JARAOC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32901703
            Assembly: GCF_029453185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3320624)
  AUTHORS   Ma,H.
  TITLE     Molecular Characterization and Antimicrobial Susceptibility of
            Human Brucella in Northeast China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3320624)
  AUTHORS   Ma,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-FEB-2023) Chinese Academy of Agricultural Sciences,
            Changchun Veterinary Research Institute, Yujinxiang Street 573,
            Changchun 130122, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARAOC000000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_JARAOC000000000.  This version of the project
            (01) has the accession number NZ_JARAOC010000000, and consists of
            sequences JARAOC010000001-JARAOC010000023.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029453185.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:58:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,274
            CDSs (total)                      :: 3,214
            Genes (coding)                    :: 3,043
            CDSs (with protein)               :: 3,043
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 171
            CDSs (without protein)            :: 171
            Pseudo Genes (ambiguous residues) :: 0 of 171
            Pseudo Genes (frameshifted)       :: 109 of 171
            Pseudo Genes (incomplete)         :: 38 of 171
            Pseudo Genes (internal stop)      :: 44 of 171
            Pseudo Genes (multiple problems)  :: 18 of 171
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3320624
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="Bru.18.48"
                     /host="Homo sapiens"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Harbin, Northeastern China"
                     /lat_lon="46.04 N 125.51 E"
                     /collection_date="2018-05-01"
                     /collected_by="Huijiao Xu"
WGS         JARAOC010000001-JARAOC010000023
WGS_SCAFLD  NZ_JARAOC010000001-NZ_JARAOC010000023
//
LOCUS       NZ_JAQZCL010000000   3290468 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain Bru.18.12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAQZCL000000000
VERSION     NZ_JAQZCL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32901667
            Assembly: GCF_029532275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3290468)
  AUTHORS   Ma,H.
  TITLE     Molecular Characterization and Antimicrobial Susceptibility of
            Human Brucella in Northeast China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3290468)
  AUTHORS   Ma,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2023) Chinese Academy of Agricultural Sciences,
            Changchun Veterinary Research Institute, Yujinxiang Street 573,
            Changchun 130122, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAQZCL000000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_JAQZCL000000000.  This version of the project
            (01) has the accession number NZ_JAQZCL010000000, and consists of
            sequences JAQZCL010000001-JAQZCL010000028.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029532275.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:52:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,243
            CDSs (total)                      :: 3,185
            Genes (coding)                    :: 3,011
            CDSs (with protein)               :: 3,011
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 174
            CDSs (without protein)            :: 174
            Pseudo Genes (ambiguous residues) :: 0 of 174
            Pseudo Genes (frameshifted)       :: 109 of 174
            Pseudo Genes (incomplete)         :: 40 of 174
            Pseudo Genes (internal stop)      :: 44 of 174
            Pseudo Genes (multiple problems)  :: 17 of 174
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3290468
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="Bru.18.12"
                     /host="Homo sapiens"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Harbin, Northeastern China"
                     /lat_lon="44.04 N 125.53 E"
                     /collection_date="2018-05-01"
                     /collected_by="Huijiao Xu"
WGS         JAQZCL010000001-JAQZCL010000028
WGS_SCAFLD  NZ_JAQZCL010000001-NZ_JAQZCL010000028
//
LOCUS       NZ_JAQZCU010000000   3291126 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain Bru.18.21, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAQZCU000000000
VERSION     NZ_JAQZCU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32901676
            Assembly: GCF_029532355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3291126)
  AUTHORS   Ma,H.
  TITLE     Molecular Characterization and Antimicrobial Susceptibility of
            Human Brucella in Northeast China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3291126)
  AUTHORS   Ma,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2023) Chinese Academy of Agricultural Sciences,
            Changchun Veterinary Research Institute, Yujinxiang Street 573,
            Changchun 130122, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAQZCU000000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_JAQZCU000000000.  This version of the project
            (01) has the accession number NZ_JAQZCU010000000, and consists of
            sequences JAQZCU010000001-JAQZCU010000022.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029532355.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:59:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,239
            CDSs (total)                      :: 3,182
            Genes (coding)                    :: 3,009
            CDSs (with protein)               :: 3,009
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 173
            CDSs (without protein)            :: 173
            Pseudo Genes (ambiguous residues) :: 0 of 173
            Pseudo Genes (frameshifted)       :: 107 of 173
            Pseudo Genes (incomplete)         :: 41 of 173
            Pseudo Genes (internal stop)      :: 44 of 173
            Pseudo Genes (multiple problems)  :: 17 of 173
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3291126
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="Bru.18.21"
                     /host="Homo sapiens"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Harbin, Northeastern China"
                     /lat_lon="45.14 N 125.43 E"
                     /collection_date="2018-05-01"
                     /collected_by="Huijiao Xu"
WGS         JAQZCU010000001-JAQZCU010000022
WGS_SCAFLD  NZ_JAQZCU010000001-NZ_JAQZCU010000022
//
LOCUS       NZ_JAQZCQ010000000   3291602 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain Bru.18.17, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAQZCQ000000000
VERSION     NZ_JAQZCQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32901672
            Assembly: GCF_029532335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3291602)
  AUTHORS   Ma,H.
  TITLE     Molecular Characterization and Antimicrobial Susceptibility of
            Human Brucella in Northeast China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3291602)
  AUTHORS   Ma,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2023) Chinese Academy of Agricultural Sciences,
            Changchun Veterinary Research Institute, Yujinxiang Street 573,
            Changchun 130122, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAQZCQ000000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_JAQZCQ000000000.  This version of the project
            (01) has the accession number NZ_JAQZCQ010000000, and consists of
            sequences JAQZCQ010000001-JAQZCQ010000024.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029532335.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:51:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,243
            CDSs (total)                      :: 3,185
            Genes (coding)                    :: 3,013
            CDSs (with protein)               :: 3,013
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 172
            CDSs (without protein)            :: 172
            Pseudo Genes (ambiguous residues) :: 0 of 172
            Pseudo Genes (frameshifted)       :: 112 of 172
            Pseudo Genes (incomplete)         :: 35 of 172
            Pseudo Genes (internal stop)      :: 44 of 172
            Pseudo Genes (multiple problems)  :: 17 of 172
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3291602
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="Bru.18.17"
                     /host="Homo sapiens"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Harbin, Northeastern China"
                     /lat_lon="44.04 N 125.58 E"
                     /collection_date="2018-05-01"
                     /collected_by="Huijiao Xu"
WGS         JAQZCQ010000001-JAQZCQ010000024
WGS_SCAFLD  NZ_JAQZCQ010000001-NZ_JAQZCQ010000024
//
LOCUS       NZ_CADFAV010000000   8083295 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1822, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADFAV000000000
VERSION     NZ_CADFAV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503474
            Assembly: GCF_902832255.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 8083295)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADFAV000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADFAV000000000.  This version of the
            project (01) has the accession number NZ_CADFAV010000000, and
            consists of sequences CADFAV010000001-CADFAV010000104.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902832255.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:28:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,048
            CDSs (total)                      :: 6,978
            Genes (coding)                    :: 6,877
            CDSs (with protein)               :: 6,877
            Genes (RNA)                       :: 70
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 101
            CDSs (without protein)            :: 101
            Pseudo Genes (ambiguous residues) :: 0 of 101
            Pseudo Genes (frameshifted)       :: 30 of 101
            Pseudo Genes (incomplete)         :: 84 of 101
            Pseudo Genes (internal stop)      :: 5 of 101
            Pseudo Genes (multiple problems)  :: 17 of 101
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8083295
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1822"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="USA"
WGS         CADFAV010000001-CADFAV010000104
WGS_SCAFLD  NZ_CADFAV010000001-NZ_CADFAV010000104
//
LOCUS       NZ_JAQZRS010000000   3291741 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain Bru.18.06, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAQZRS000000000
VERSION     NZ_JAQZRS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32901661
            Assembly: GCF_029532255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3291741)
  AUTHORS   Ma,H.
  TITLE     Molecular Characterization and Antimicrobial Susceptibility of
            Human Brucella in Northeast China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3291741)
  AUTHORS   Ma,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-FEB-2023) Chinese Academy of Agricultural Sciences,
            Changchun Veterinary Research Institute, Yujinxiang Street 573,
            Changchun 130122, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAQZRS000000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_JAQZRS000000000.  This version of the project
            (01) has the accession number NZ_JAQZRS010000000, and consists of
            sequences JAQZRS010000001-JAQZRS010000024.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029532255.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:55:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,243
            CDSs (total)                      :: 3,185
            Genes (coding)                    :: 3,013
            CDSs (with protein)               :: 3,013
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 172
            CDSs (without protein)            :: 172
            Pseudo Genes (ambiguous residues) :: 0 of 172
            Pseudo Genes (frameshifted)       :: 112 of 172
            Pseudo Genes (incomplete)         :: 35 of 172
            Pseudo Genes (internal stop)      :: 44 of 172
            Pseudo Genes (multiple problems)  :: 17 of 172
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3291741
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="Bru.18.06"
                     /host="Homo sapiens"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Harbin, Northeastern China"
                     /lat_lon="44.04 N 125.47 E"
                     /collection_date="2018-05-01"
                     /collected_by="Huijiao Xu"
WGS         JAQZRS010000001-JAQZRS010000024
WGS_SCAFLD  NZ_JAQZRS010000001-NZ_JAQZRS010000024
//
LOCUS       NZ_JAQZRR010000000   3327878 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain Bru.18.05, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAQZRR000000000
VERSION     NZ_JAQZRR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32901660
            Assembly: GCF_029532215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3327878)
  AUTHORS   Ma,H.
  TITLE     Epidemiology and antimicrobial susceptibility testing of human
            Brucella in northeastern China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3327878)
  AUTHORS   Ma,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2023) Chinese Academy of Agricultural Sciences,
            Changchun Veterinary Research Institute, Yujinxiang Street 573,
            Changchun 130122, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAQZRR000000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_JAQZRR000000000.  This version of the project
            (01) has the accession number NZ_JAQZRR010000000, and consists of
            sequences JAQZRR010000001-JAQZRR010000026.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029532215.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:06:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,274
            CDSs (total)                      :: 3,213
            Genes (coding)                    :: 3,040
            CDSs (with protein)               :: 3,040
            Genes (RNA)                       :: 61
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 173
            CDSs (without protein)            :: 173
            Pseudo Genes (ambiguous residues) :: 0 of 173
            Pseudo Genes (frameshifted)       :: 111 of 173
            Pseudo Genes (incomplete)         :: 38 of 173
            Pseudo Genes (internal stop)      :: 45 of 173
            Pseudo Genes (multiple problems)  :: 19 of 173
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3327878
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="Bru.18.05"
                     /host="Homo sapiens"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Harbin, Northeastern China"
                     /lat_lon="44.04 N 125.46 E"
                     /collection_date="2018-05-01"
                     /collected_by="Huijiao Xu"
WGS         JAQZRR010000001-JAQZRR010000026
WGS_SCAFLD  NZ_JAQZRR010000001-NZ_JAQZRR010000026
//
LOCUS       NZ_CADEPO010000000   8288532 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1670, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADEPO000000000
VERSION     NZ_CADEPO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503344
            Assembly: GCF_902829325.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 8288532)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADEPO000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADEPO000000000.  This version of the
            project (01) has the accession number NZ_CADEPO010000000, and
            consists of sequences CADEPO010000001-CADEPO010000075.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902829325.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:28:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,430
            CDSs (total)                      :: 7,363
            Genes (coding)                    :: 7,157
            CDSs (with protein)               :: 7,157
            Genes (RNA)                       :: 67
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 206
            CDSs (without protein)            :: 206
            Pseudo Genes (ambiguous residues) :: 0 of 206
            Pseudo Genes (frameshifted)       :: 106 of 206
            Pseudo Genes (incomplete)         :: 124 of 206
            Pseudo Genes (internal stop)      :: 12 of 206
            Pseudo Genes (multiple problems)  :: 33 of 206
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8288532
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1670"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="United Kingdom"
WGS         CADEPO010000001-CADEPO010000075
WGS_SCAFLD  NZ_CADEPO010000001-NZ_CADEPO010000075
//
LOCUS       NZ_CADEVG010000000   8838832 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia cepacia strain BCC1633, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADEVG000000000
VERSION     NZ_CADEVG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503604
            Assembly: GCF_902830795.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia cepacia
  ORGANISM  Burkholderia cepacia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 8838832)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADEVG000000000.1.
            The Burkholderia cepacia whole genome shotgun (WGS) project has the
            project accession NZ_CADEVG000000000.  This version of the project
            (01) has the accession number NZ_CADEVG010000000, and consists of
            sequences CADEVG010000001-CADEVG010000332.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902830795.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:59:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,321
            CDSs (total)                      :: 8,224
            Genes (coding)                    :: 7,937
            CDSs (with protein)               :: 7,937
            Genes (RNA)                       :: 97
            rRNAs                             :: 7, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (16S)
            tRNAs                             :: 81
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 287
            CDSs (without protein)            :: 287
            Pseudo Genes (ambiguous residues) :: 0 of 287
            Pseudo Genes (frameshifted)       :: 70 of 287
            Pseudo Genes (incomplete)         :: 252 of 287
            Pseudo Genes (internal stop)      :: 28 of 287
            Pseudo Genes (multiple problems)  :: 57 of 287
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8838832
                     /organism="Burkholderia cepacia"
                     /mol_type="genomic DNA"
                     /strain="BCC1633"
                     /isolation_source="Environmental"
                     /db_xref="taxon:292"
                     /geo_loc_name="Malaysia"
WGS         CADEVG010000001-CADEVG010000332
WGS_SCAFLD  NZ_CADEVG010000001-NZ_CADEVG010000332
//
LOCUS       NZ_CADEYE010000000   7999953 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1722, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADEYE000000000
VERSION     NZ_CADEYE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503393
            Assembly: GCF_902831595.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 7999953)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADEYE000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADEYE000000000.  This version of the
            project (01) has the accession number NZ_CADEYE010000000, and
            consists of sequences CADEYE010000001-CADEYE010000063.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902831595.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:27:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,947
            CDSs (total)                      :: 6,876
            Genes (coding)                    :: 6,786
            CDSs (with protein)               :: 6,786
            Genes (RNA)                       :: 71
            rRNAs                             :: 5, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2 (5S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 90
            CDSs (without protein)            :: 90
            Pseudo Genes (ambiguous residues) :: 0 of 90
            Pseudo Genes (frameshifted)       :: 25 of 90
            Pseudo Genes (incomplete)         :: 78 of 90
            Pseudo Genes (internal stop)      :: 5 of 90
            Pseudo Genes (multiple problems)  :: 17 of 90
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7999953
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1722"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="USA"
WGS         CADEYE010000001-CADEYE010000063
WGS_SCAFLD  NZ_CADEYE010000001-NZ_CADEYE010000063
//
LOCUS       NZ_JAQZCX010000000   3291711 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain Bru.18.24, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAQZCX000000000
VERSION     NZ_JAQZCX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32901679
            Assembly: GCF_029452685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3291711)
  AUTHORS   Ma,H.
  TITLE     Molecular Characterization and Antimicrobial Susceptibility of
            Human Brucella in Northeast China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3291711)
  AUTHORS   Ma,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2023) Chinese Academy of Agricultural Sciences,
            Changchun Veterinary Research Institute, Yujinxiang Street 573,
            Changchun 130122, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAQZCX000000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_JAQZCX000000000.  This version of the project
            (01) has the accession number NZ_JAQZCX010000000, and consists of
            sequences JAQZCX010000001-JAQZCX010000024.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029452685.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:58:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,245
            CDSs (total)                      :: 3,187
            Genes (coding)                    :: 3,015
            CDSs (with protein)               :: 3,015
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 172
            CDSs (without protein)            :: 172
            Pseudo Genes (ambiguous residues) :: 0 of 172
            Pseudo Genes (frameshifted)       :: 112 of 172
            Pseudo Genes (incomplete)         :: 36 of 172
            Pseudo Genes (internal stop)      :: 45 of 172
            Pseudo Genes (multiple problems)  :: 19 of 172
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3291711
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="Bru.18.24"
                     /host="Homo sapiens"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Harbin, Northeastern China"
                     /lat_lon="45.14 N 125.46 E"
                     /collection_date="2018-05-01"
                     /collected_by="Huijiao Xu"
WGS         JAQZCX010000001-JAQZCX010000024
WGS_SCAFLD  NZ_JAQZCX010000001-NZ_JAQZCX010000024
//
LOCUS       NZ_JYNC02000000      8720517 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia cenocepacia strain IPCU-B, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JYNC00000000
VERSION     NZ_JYNC00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03349526
            Assembly: GCF_002071955.2
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia cenocepacia
  ORGANISM  Burkholderia cenocepacia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 8720517)
  AUTHORS   Patil,P.P., Mali,S., Midha,S., Gautam,V., Dash,L., Kumar,S.,
            Shastri,J., Singhal,L. and Patil,P.B.
  TITLE     Genomics Reveals a Unique Clone of Burkholderia cenocepacia
            Harboring an Actively Excising Novel Genomic Island
  JOURNAL   Front Microbiol 8, 590 (2017)
   PUBMED   28428775
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8720517)
  AUTHORS   Patil,P., Mali,S., Midha,S., Gautam,V., Dash,L., Kumar,S.,
            Shastri,J., Singhal,L. and Patil,P.B.
  TITLE     Genomics reveals a unique clone of Burkholderia cenocepacia
            harbouring an actively excising novel genomic island
  JOURNAL   Front Microbiol 8 (590), 1-11 (2017)
REFERENCE   3  (bases 1 to 8720517)
  AUTHORS   Saroha,T., Patil,P., Gautam,D.V. and Patil,D.P.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-SEP-2021) Bacterial Genomics and Evolution
            Laboratory, CSIR-Institute of Microbial Technology, Sector 39A,
            Chandigarh, Chandigarh 160036, India
REFERENCE   4  (bases 1 to 8720517)
  AUTHORS   Patil,P.P., Midha,S., Mali,S., Gautam,V., Dash,L., Kumar,S.,
            Shastri,J., Singhal,L. and Patil,P.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2015) Bacterial Genomics and Evolution
            Laboratory, CSIR-Institute of Microbial Technology, Sector 39A,
            Chandigarh 160036, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JYNC00000000.2.
            
            On Nov 8, 2022 this sequence version replaced NZ_JYNC00000000.1.
            The Burkholderia cenocepacia whole genome shotgun (WGS) project has
            the project accession NZ_JYNC00000000.  This version of the project
            (02) has the accession number NZ_JYNC02000000, and consists of
            sequences JYNC02000001-JYNC02000248.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 203.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002071955.2-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:12:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,231
            CDSs (total)                      :: 8,161
            Genes (coding)                    :: 7,985
            CDSs (with protein)               :: 7,985
            Genes (RNA)                       :: 70
            rRNAs                             :: 2, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 4 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 176
            CDSs (without protein)            :: 176
            Pseudo Genes (ambiguous residues) :: 0 of 176
            Pseudo Genes (frameshifted)       :: 45 of 176
            Pseudo Genes (incomplete)         :: 151 of 176
            Pseudo Genes (internal stop)      :: 10 of 176
            Pseudo Genes (multiple problems)  :: 27 of 176
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8720517
                     /organism="Burkholderia cenocepacia"
                     /mol_type="genomic DNA"
                     /strain="IPCU-B"
                     /isolation_source="Vial cap"
                     /db_xref="taxon:95486"
                     /geo_loc_name="India"
                     /collection_date="2012"
WGS         JYNC02000001-JYNC02000248
WGS_SCAFLD  NZ_JYNC02000001-NZ_JYNC02000248
//
LOCUS       NZ_CADEQK010000000   8391504 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1783, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADEQK000000000
VERSION     NZ_CADEQK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503436
            Assembly: GCF_902829505.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 8391504)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADEQK000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADEQK000000000.  This version of the
            project (01) has the accession number NZ_CADEQK010000000, and
            consists of sequences CADEQK010000001-CADEQK010000184.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902829505.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:32:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,475
            CDSs (total)                      :: 7,397
            Genes (coding)                    :: 7,208
            CDSs (with protein)               :: 7,208
            Genes (RNA)                       :: 78
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 189
            CDSs (without protein)            :: 189
            Pseudo Genes (ambiguous residues) :: 0 of 189
            Pseudo Genes (frameshifted)       :: 58 of 189
            Pseudo Genes (incomplete)         :: 156 of 189
            Pseudo Genes (internal stop)      :: 18 of 189
            Pseudo Genes (multiple problems)  :: 38 of 189
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8391504
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1783"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="USA"
WGS         CADEQK010000001-CADEQK010000184
WGS_SCAFLD  NZ_CADEQK010000001-NZ_CADEQK010000184
//
LOCUS       NZ_JAQZRO010000000   3291474 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella melitensis strain Bru.18.02, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAQZRO000000000
VERSION     NZ_JAQZRO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32901657
            Assembly: GCF_029532235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella melitensis
  ORGANISM  Brucella melitensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3291474)
  AUTHORS   Ma,H.
  TITLE     Epidemiology and antimicrobial susceptibility testing of human
            Brucella in northeastern China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3291474)
  AUTHORS   Ma,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2023) Chinese Academy of Agricultural Sciences,
            Changchun Veterinary Research Institute, Yujinxiang Street 573,
            Changchun 130122, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAQZRO000000000.1.
            The Brucella melitensis whole genome shotgun (WGS) project has the
            project accession NZ_JAQZRO000000000.  This version of the project
            (01) has the accession number NZ_JAQZRO010000000, and consists of
            sequences JAQZRO010000001-JAQZRO010000025.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029532235.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:14:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,250
            CDSs (total)                      :: 3,192
            Genes (coding)                    :: 3,019
            CDSs (with protein)               :: 3,019
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 173
            CDSs (without protein)            :: 173
            Pseudo Genes (ambiguous residues) :: 0 of 173
            Pseudo Genes (frameshifted)       :: 107 of 173
            Pseudo Genes (incomplete)         :: 41 of 173
            Pseudo Genes (internal stop)      :: 45 of 173
            Pseudo Genes (multiple problems)  :: 18 of 173
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3291474
                     /organism="Brucella melitensis"
                     /mol_type="genomic DNA"
                     /strain="Bru.18.02"
                     /host="Homo sapiens"
                     /db_xref="taxon:29459"
                     /geo_loc_name="China: Harbin, Northeastern China"
                     /lat_lon="44.04 N 125.43 E"
                     /collection_date="2018-05-01"
                     /collected_by="Huijiao Xu"
WGS         JAQZRO010000001-JAQZRO010000025
WGS_SCAFLD  NZ_JAQZRO010000001-NZ_JAQZRO010000025
//
LOCUS       NZ_CADFGW010000000   6761790 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia multivorans strain BCC0059, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADFGW000000000
VERSION     NZ_CADFGW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503542
            Assembly: GCF_902833835.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia multivorans
  ORGANISM  Burkholderia multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 6761790)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADFGW000000000.1.
            The Burkholderia multivorans whole genome shotgun (WGS) project has
            the project accession NZ_CADFGW000000000.  This version of the
            project (01) has the accession number NZ_CADFGW010000000, and
            consists of sequences CADFGW010000001-CADFGW010000044.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902833835.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:24:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,239
            CDSs (total)                      :: 6,165
            Genes (coding)                    :: 6,086
            CDSs (with protein)               :: 6,086
            Genes (RNA)                       :: 74
            rRNAs                             :: 5, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 36 of 79
            Pseudo Genes (incomplete)         :: 58 of 79
            Pseudo Genes (internal stop)      :: 6 of 79
            Pseudo Genes (multiple problems)  :: 19 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6761790
                     /organism="Burkholderia multivorans"
                     /mol_type="genomic DNA"
                     /strain="BCC0059"
                     /isolation_source="Clinical, sputum"
                     /db_xref="taxon:87883"
                     /geo_loc_name="Canada"
WGS         CADFGW010000001-CADFGW010000044
WGS_SCAFLD  NZ_CADFGW010000001-NZ_CADFGW010000044
//
LOCUS       NZ_JYNB02000000      8736101 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia cenocepacia strain IPCU-A, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JYNB00000000
VERSION     NZ_JYNB00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03349524
            Assembly: GCF_002071945.2
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia cenocepacia
  ORGANISM  Burkholderia cenocepacia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 8736101)
  AUTHORS   Patil,P.P., Mali,S., Midha,S., Gautam,V., Dash,L., Kumar,S.,
            Shastri,J., Singhal,L. and Patil,P.B.
  TITLE     Genomics Reveals a Unique Clone of Burkholderia cenocepacia
            Harboring an Actively Excising Novel Genomic Island
  JOURNAL   Front Microbiol 8, 590 (2017)
   PUBMED   28428775
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8736101)
  AUTHORS   Patil,P., Mali,S., Midha,S., Gautam,V., Dash,L., Kumar,S.,
            Shastri,J., Singhal,L. and Patil,P.B.
  TITLE     Genomics reveals a unique clone of Burkholderia cenocepacia
            harbouring an actively excising novel genomic island
  JOURNAL   Front Microbiol 8 (590), 1-11 (2017)
REFERENCE   3  (bases 1 to 8736101)
  AUTHORS   Saroha,T., Patil,P., Gautam,D.V. and Patil,D.P.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-SEP-2021) Bacterial Genomics and Evolution
            Laboratory, CSIR-Institute of Microbial Technology, Sector 39A,
            Chandigarh, Chandigarh 160036, India
REFERENCE   4  (bases 1 to 8736101)
  AUTHORS   Patil,P.P., Midha,S., Mali,S., Gautam,V., Dash,L., Kumar,S.,
            Shastri,J., Singhal,L. and Patil,P.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2015) Bacterial Genomics and Evolution
            Laboratory, CSIR-Institute of Microbial Technology, Sector 39A,
            Chandigarh 160036, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JYNB00000000.2.
            
            On Nov 8, 2022 this sequence version replaced NZ_JYNB00000000.1.
            The Burkholderia cenocepacia whole genome shotgun (WGS) project has
            the project accession NZ_JYNB00000000.  This version of the project
            (02) has the accession number NZ_JYNB02000000, and consists of
            sequences JYNB02000001-JYNB02000229.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 95.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002071945.2-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:28:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,231
            CDSs (total)                      :: 8,143
            Genes (coding)                    :: 7,971
            CDSs (with protein)               :: 7,971
            Genes (RNA)                       :: 88
            rRNAs                             :: 5, 6, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 6, 8 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 172
            CDSs (without protein)            :: 172
            Pseudo Genes (ambiguous residues) :: 0 of 172
            Pseudo Genes (frameshifted)       :: 46 of 172
            Pseudo Genes (incomplete)         :: 147 of 172
            Pseudo Genes (internal stop)      :: 9 of 172
            Pseudo Genes (multiple problems)  :: 27 of 172
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8736101
                     /organism="Burkholderia cenocepacia"
                     /mol_type="genomic DNA"
                     /strain="IPCU-A"
                     /isolation_source="Vial cap"
                     /db_xref="taxon:95486"
                     /geo_loc_name="India"
                     /collection_date="2012"
WGS         JYNB02000001-JYNB02000229
WGS_SCAFLD  NZ_JYNB02000001-NZ_JYNB02000229
//
LOCUS       NZ_CADFCW010000000   8126362 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1883, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADFCW000000000
VERSION     NZ_CADFCW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503527
            Assembly: GCF_902832785.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 8126362)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADFCW000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADFCW000000000.  This version of the
            project (01) has the accession number NZ_CADFCW010000000, and
            consists of sequences CADFCW010000001-CADFCW010000099.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902832785.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:31:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,112
            CDSs (total)                      :: 7,044
            Genes (coding)                    :: 6,952
            CDSs (with protein)               :: 6,952
            Genes (RNA)                       :: 68
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 1 (5S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 20 of 92
            Pseudo Genes (incomplete)         :: 82 of 92
            Pseudo Genes (internal stop)      :: 5 of 92
            Pseudo Genes (multiple problems)  :: 13 of 92
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8126362
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1883"
                     /db_xref="taxon:28095"
WGS         CADFCW010000001-CADFCW010000099
WGS_SCAFLD  NZ_CADFCW010000001-NZ_CADFCW010000099
//
LOCUS       NZ_JYMY02000000      8742442 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia cenocepacia strain BC-21, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JYMY00000000
VERSION     NZ_JYMY00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03349521
            Assembly: GCF_002071905.2
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia cenocepacia
  ORGANISM  Burkholderia cenocepacia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 8742442)
  AUTHORS   Patil,P.P., Mali,S., Midha,S., Gautam,V., Dash,L., Kumar,S.,
            Shastri,J., Singhal,L. and Patil,P.B.
  TITLE     Genomics Reveals a Unique Clone of Burkholderia cenocepacia
            Harboring an Actively Excising Novel Genomic Island
  JOURNAL   Front Microbiol 8, 590 (2017)
   PUBMED   28428775
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8742442)
  AUTHORS   Patil,P., Mali,S., Midha,S., Gautam,V., Dash,L., Kumar,S.,
            Shastri,J., Singhal,L. and Patil,P.B.
  TITLE     Genomics reveals a unique clone of Burkholderia cenocepacia
            harbouring an actively excising novel genomic island
  JOURNAL   Front Microbiol 8 (590), 1-11 (2017)
REFERENCE   3  (bases 1 to 8742442)
  AUTHORS   Saroha,T., Patil,P., Gautam,D.V. and Patil,D.P.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-SEP-2021) Bacterial Genomics and Evolution
            Laboratory, CSIR-Institute of Microbial Technology, Sector 39A,
            Chandigarh, Chandigarh 160036, India
REFERENCE   4  (bases 1 to 8742442)
  AUTHORS   Patil,P.P., Midha,S., Mali,S., Gautam,V., Dash,L., Kumar,S.,
            Shastri,J., Singhal,L. and Patil,P.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2015) Bacterial Genomics and Evolution
            Laboratory, CSIR-Institute of Microbial Technology, Sector 39A,
            Chandigarh 160036, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JYMY00000000.2.
            
            On Nov 8, 2022 this sequence version replaced NZ_JYMY00000000.1.
            The Burkholderia cenocepacia whole genome shotgun (WGS) project has
            the project accession NZ_JYMY00000000.  This version of the project
            (02) has the accession number NZ_JYMY02000000, and consists of
            sequences JYMY02000001-JYMY02000231.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 102.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002071905.2-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:29:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,243
            CDSs (total)                      :: 8,158
            Genes (coding)                    :: 7,986
            CDSs (with protein)               :: 7,986
            Genes (RNA)                       :: 85
            rRNAs                             :: 5, 6, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 6, 7 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 172
            CDSs (without protein)            :: 172
            Pseudo Genes (ambiguous residues) :: 0 of 172
            Pseudo Genes (frameshifted)       :: 45 of 172
            Pseudo Genes (incomplete)         :: 147 of 172
            Pseudo Genes (internal stop)      :: 10 of 172
            Pseudo Genes (multiple problems)  :: 27 of 172
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8742442
                     /organism="Burkholderia cenocepacia"
                     /mol_type="genomic DNA"
                     /strain="BC-21"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:95486"
                     /geo_loc_name="India"
                     /collection_date="2012"
WGS         JYMY02000001-JYMY02000231
WGS_SCAFLD  NZ_JYMY02000001-NZ_JYMY02000231
//
LOCUS       NZ_CADFGR010000000   6973447 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia multivorans strain BCC0050, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADFGR000000000
VERSION     NZ_CADFGR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503541
            Assembly: GCF_902833885.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia multivorans
  ORGANISM  Burkholderia multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 6973447)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADFGR000000000.1.
            The Burkholderia multivorans whole genome shotgun (WGS) project has
            the project accession NZ_CADFGR000000000.  This version of the
            project (01) has the accession number NZ_CADFGR010000000, and
            consists of sequences CADFGR010000001-CADFGR010000044.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902833885.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:34:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,482
            CDSs (total)                      :: 6,400
            Genes (coding)                    :: 6,319
            CDSs (with protein)               :: 6,319
            Genes (RNA)                       :: 82
            rRNAs                             :: 5, 3, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            partial rRNAs                     :: 2, 7 (16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 26 of 81
            Pseudo Genes (incomplete)         :: 63 of 81
            Pseudo Genes (internal stop)      :: 12 of 81
            Pseudo Genes (multiple problems)  :: 18 of 81
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6973447
                     /organism="Burkholderia multivorans"
                     /mol_type="genomic DNA"
                     /strain="BCC0050"
                     /isolation_source="Environmental, soil"
                     /db_xref="taxon:87883"
                     /geo_loc_name="United Kingdom"
WGS         CADFGR010000001-CADFGR010000044
WGS_SCAFLD  NZ_CADFGR010000001-NZ_CADFGR010000044
//
LOCUS       NZ_JYMX02000000      8742022 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia cenocepacia strain BC-19, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JYMX00000000
VERSION     NZ_JYMX00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03349520
            Assembly: GCF_002071875.2
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia cenocepacia
  ORGANISM  Burkholderia cenocepacia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 8742022)
  AUTHORS   Patil,P.P., Mali,S., Midha,S., Gautam,V., Dash,L., Kumar,S.,
            Shastri,J., Singhal,L. and Patil,P.B.
  TITLE     Genomics Reveals a Unique Clone of Burkholderia cenocepacia
            Harboring an Actively Excising Novel Genomic Island
  JOURNAL   Front Microbiol 8, 590 (2017)
   PUBMED   28428775
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8742022)
  AUTHORS   Patil,P., Mali,S., Midha,S., Gautam,V., Dash,L., Kumar,S.,
            Shastri,J., Singhal,L. and Patil,P.B.
  TITLE     Genomics reveals a unique clone of Burkholderia cenocepacia
            harbouring an actively excising novel genomic island
  JOURNAL   Front Microbiol 8 (590), 1-11 (2017)
REFERENCE   3  (bases 1 to 8742022)
  AUTHORS   Saroha,T., Patil,P., Gautam,D.V. and Patil,D.P.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-SEP-2021) Bacterial Genomics and Evolution
            Laboratory, CSIR-Institute of Microbial Technology, Sector 39A,
            Chandigarh, Chandigarh 160036, India
REFERENCE   4  (bases 1 to 8742022)
  AUTHORS   Patil,P.P., Midha,S., Mali,S., Gautam,V., Dash,L., Kumar,S.,
            Shastri,J., Singhal,L. and Patil,P.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2015) Bacterial Genomics and Evolution
            Laboratory, CSIR-Institute of Microbial Technology, Sector 39A,
            Chandigarh 160036, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JYMX00000000.2.
            
            On Nov 8, 2022 this sequence version replaced NZ_JYMX00000000.1.
            The Burkholderia cenocepacia whole genome shotgun (WGS) project has
            the project accession NZ_JYMX00000000.  This version of the project
            (02) has the accession number NZ_JYMX02000000, and consists of
            sequences JYMX02000001-JYMX02000241.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 84.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002071875.2-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:45:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,253
            CDSs (total)                      :: 8,167
            Genes (coding)                    :: 7,983
            CDSs (with protein)               :: 7,983
            Genes (RNA)                       :: 86
            rRNAs                             :: 5, 4, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 4, 10 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 184
            CDSs (without protein)            :: 184
            Pseudo Genes (ambiguous residues) :: 0 of 184
            Pseudo Genes (frameshifted)       :: 44 of 184
            Pseudo Genes (incomplete)         :: 159 of 184
            Pseudo Genes (internal stop)      :: 10 of 184
            Pseudo Genes (multiple problems)  :: 26 of 184
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8742022
                     /organism="Burkholderia cenocepacia"
                     /mol_type="genomic DNA"
                     /strain="BC-19"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:95486"
                     /geo_loc_name="India"
                     /collection_date="2012"
WGS         JYMX02000001-JYMX02000241
WGS_SCAFLD  NZ_JYMX02000001-NZ_JYMX02000241
//
LOCUS       NZ_CBDDNZ010000000   3242942 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella abortus isolate BA676, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CBDDNZ000000000
VERSION     NZ_CBDDNZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117929757
            Assembly: GCF_965231655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella abortus (Brucella melitensis biovar Abortus)
  ORGANISM  Brucella abortus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella; Brucella melitensis group.
REFERENCE   1  (bases 1 to 3242942)
  AUTHORS   Motro,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2025) Faculty of Health Sciences, MAGICAL, Marcus
            Campus, Ben Gurion University of the Negev, Beer Sheva, Israel
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBDDNZ000000000.1.
            The Brucella abortus whole genome shotgun (WGS) project has the
            project accession NZ_CBDDNZ000000000.  This version of the project
            (01) has the accession number NZ_CBDDNZ010000000, and consists of
            sequences CBDDNZ010000001-CBDDNZ010000031.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_965231655.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:51:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,198
            CDSs (total)                      :: 3,142
            Genes (coding)                    :: 2,961
            CDSs (with protein)               :: 2,961
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 181
            CDSs (without protein)            :: 181
            Pseudo Genes (ambiguous residues) :: 0 of 181
            Pseudo Genes (frameshifted)       :: 123 of 181
            Pseudo Genes (incomplete)         :: 46 of 181
            Pseudo Genes (internal stop)      :: 33 of 181
            Pseudo Genes (multiple problems)  :: 19 of 181
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3242942
                     /organism="Brucella abortus"
                     /mol_type="genomic DNA"
                     /isolate="BA676"
                     /db_xref="taxon:235"
                     /geo_loc_name="Israel"
                     /collection_date="2021"
WGS         CBDDNZ010000001-CBDDNZ010000031
WGS_SCAFLD  NZ_CBDDNZ010000001-NZ_CBDDNZ010000031
//
LOCUS       NZ_CADFBL010000000   8140250 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1837, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADFBL000000000
VERSION     NZ_CADFBL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503489
            Assembly: GCF_902832455.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 8140250)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADFBL000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADFBL000000000.  This version of the
            project (01) has the accession number NZ_CADFBL010000000, and
            consists of sequences CADFBL010000001-CADFBL010000159.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902832455.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:37:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,247
            CDSs (total)                      :: 7,174
            Genes (coding)                    :: 6,943
            CDSs (with protein)               :: 6,943
            Genes (RNA)                       :: 73
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5 (5S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 231
            CDSs (without protein)            :: 231
            Pseudo Genes (ambiguous residues) :: 0 of 231
            Pseudo Genes (frameshifted)       :: 48 of 231
            Pseudo Genes (incomplete)         :: 194 of 231
            Pseudo Genes (internal stop)      :: 22 of 231
            Pseudo Genes (multiple problems)  :: 31 of 231
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8140250
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1837"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="USA"
WGS         CADFBL010000001-CADFBL010000159
WGS_SCAFLD  NZ_CADFBL010000001-NZ_CADFBL010000159
//
LOCUS       NZ_JBCAUP010000000   5634663 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Brucella cytisi strain ESC1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCAUP000000000
VERSION     NZ_JBCAUP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40981466
            Assembly: GCF_038433355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brucella cytisi (Ochrobactrum cytisi)
  ORGANISM  Brucella cytisi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (bases 1 to 5634663)
  AUTHORS   Zamlynska,K., Zebracki,K., Komaniecka,I. and Choma,A.
  TITLE     Determination of the lipid A structure of Brucella lupini and
            Brucella cytisi, and comparative analysis of the lipid A
            biosynthesis gene sequences of these bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5634663)
  AUTHORS   Zamlynska,K., Zebracki,K., Komaniecka,I. and Choma,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2024) Department of Genetics and Microbiology,
            Maria Curie-Sklodowska University, Akademicka 19, Lublin 20-033,
            Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCAUP000000000.1.
            The Brucella cytisi whole genome shotgun (WGS) project has the
            project accession NZ_JBCAUP000000000.  This version of the project
            (01) has the accession number NZ_JBCAUP010000000, and consists of
            sequences JBCAUP010000001-JBCAUP010000055.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: JUL-2023
            Assembly Method        :: SOAPdenovo v. 2.04; SPAdes v. JUNE-2023;
                                      ABySS v. JUNE-2023; CISA v. JUNE-2023
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 215.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038433355.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:03:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,340
            CDSs (total)                      :: 5,252
            Genes (coding)                    :: 5,113
            CDSs (with protein)               :: 5,113
            Genes (RNA)                       :: 88
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 139
            CDSs (without protein)            :: 139
            Pseudo Genes (ambiguous residues) :: 0 of 139
            Pseudo Genes (frameshifted)       :: 72 of 139
            Pseudo Genes (incomplete)         :: 83 of 139
            Pseudo Genes (internal stop)      :: 27 of 139
            Pseudo Genes (multiple problems)  :: 39 of 139
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5634663
                     /organism="Brucella cytisi"
                     /mol_type="genomic DNA"
                     /strain="ESC1"
                     /host="Cytisus scoparius"
                     /type_material="type strain of Ochrobactrum cytisi"
                     /db_xref="taxon:407152"
                     /geo_loc_name="Spain: contaminated soil from southern
                     Spain (Sevilla) near to the Guadiamar river"
                     /collection_date="2023-06"
WGS         JBCAUP010000001-JBCAUP010000055
WGS_SCAFLD  NZ_JBCAUP010000001-NZ_JBCAUP010000055
//
LOCUS       NZ_CADEXR010000000   8464483 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1713, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADEXR000000000
VERSION     NZ_CADEXR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503385
            Assembly: GCF_902831445.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 8464483)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADEXR000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADEXR000000000.  This version of the
            project (01) has the accession number NZ_CADEXR010000000, and
            consists of sequences CADEXR010000001-CADEXR010000192.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902831445.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:37:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,591
            CDSs (total)                      :: 7,524
            Genes (coding)                    :: 7,311
            CDSs (with protein)               :: 7,311
            Genes (RNA)                       :: 67
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 213
            CDSs (without protein)            :: 213
            Pseudo Genes (ambiguous residues) :: 0 of 213
            Pseudo Genes (frameshifted)       :: 32 of 213
            Pseudo Genes (incomplete)         :: 194 of 213
            Pseudo Genes (internal stop)      :: 7 of 213
            Pseudo Genes (multiple problems)  :: 18 of 213
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8464483
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1713"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="USA"
WGS         CADEXR010000001-CADEXR010000192
WGS_SCAFLD  NZ_CADEXR010000001-NZ_CADEXR010000192
//
LOCUS       NZ_CADEYO010000000   8129027 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1728, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADEYO000000000
VERSION     NZ_CADEYO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503399
            Assembly: GCF_902831685.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 8129027)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADEYO000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADEYO000000000.  This version of the
            project (01) has the accession number NZ_CADEYO010000000, and
            consists of sequences CADEYO010000001-CADEYO010000050.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902831685.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:41:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,056
            CDSs (total)                      :: 6,988
            Genes (coding)                    :: 6,899
            CDSs (with protein)               :: 6,899
            Genes (RNA)                       :: 68
            rRNAs                             :: 3, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 89
            CDSs (without protein)            :: 89
            Pseudo Genes (ambiguous residues) :: 0 of 89
            Pseudo Genes (frameshifted)       :: 25 of 89
            Pseudo Genes (incomplete)         :: 72 of 89
            Pseudo Genes (internal stop)      :: 11 of 89
            Pseudo Genes (multiple problems)  :: 19 of 89
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8129027
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1728"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="USA"
WGS         CADEYO010000001-CADEYO010000050
WGS_SCAFLD  NZ_CADEYO010000001-NZ_CADEYO010000050
//
LOCUS       NZ_CADFBZ010000000   8196034 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1844, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADFBZ000000000
VERSION     NZ_CADFBZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503495
            Assembly: GCF_902832555.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 8196034)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADFBZ000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADFBZ000000000.  This version of the
            project (01) has the accession number NZ_CADFBZ010000000, and
            consists of sequences CADFBZ010000001-CADFBZ010000206.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902832555.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:44:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,303
            CDSs (total)                      :: 7,231
            Genes (coding)                    :: 7,038
            CDSs (with protein)               :: 7,038
            Genes (RNA)                       :: 72
            rRNAs                             :: 1, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (16S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 193
            CDSs (without protein)            :: 193
            Pseudo Genes (ambiguous residues) :: 0 of 193
            Pseudo Genes (frameshifted)       :: 47 of 193
            Pseudo Genes (incomplete)         :: 159 of 193
            Pseudo Genes (internal stop)      :: 18 of 193
            Pseudo Genes (multiple problems)  :: 29 of 193
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8196034
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1844"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="USA"
WGS         CADFBZ010000001-CADFBZ010000206
WGS_SCAFLD  NZ_CADFBZ010000001-NZ_CADFBZ010000206
//
LOCUS       NZ_CADEXD010000000   8440254 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1674, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADEXD000000000
VERSION     NZ_CADEXD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503347
            Assembly: GCF_902831195.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 8440254)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADEXD000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADEXD000000000.  This version of the
            project (01) has the accession number NZ_CADEXD010000000, and
            consists of sequences CADEXD010000001-CADEXD010000084.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902831195.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:38:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,510
            CDSs (total)                      :: 7,442
            Genes (coding)                    :: 7,258
            CDSs (with protein)               :: 7,258
            Genes (RNA)                       :: 68
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 184
            CDSs (without protein)            :: 184
            Pseudo Genes (ambiguous residues) :: 0 of 184
            Pseudo Genes (frameshifted)       :: 66 of 184
            Pseudo Genes (incomplete)         :: 145 of 184
            Pseudo Genes (internal stop)      :: 18 of 184
            Pseudo Genes (multiple problems)  :: 42 of 184
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8440254
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1674"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="United Kingdom"
WGS         CADEXD010000001-CADEXD010000084
WGS_SCAFLD  NZ_CADEXD010000001-NZ_CADEXD010000084
//
LOCUS       NZ_CADFDE010000000   6929490 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia multivorans strain BCC0099, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADFDE000000000
VERSION     NZ_CADFDE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503546
            Assembly: GCF_902832855.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia multivorans
  ORGANISM  Burkholderia multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 6929490)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADFDE000000000.1.
            The Burkholderia multivorans whole genome shotgun (WGS) project has
            the project accession NZ_CADFDE000000000.  This version of the
            project (01) has the accession number NZ_CADFDE010000000, and
            consists of sequences CADFDE010000001-CADFDE010000062.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902832855.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:39:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,429
            CDSs (total)                      :: 6,353
            Genes (coding)                    :: 6,246
            CDSs (with protein)               :: 6,246
            Genes (RNA)                       :: 76
            rRNAs                             :: 5, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 107
            CDSs (without protein)            :: 107
            Pseudo Genes (ambiguous residues) :: 0 of 107
            Pseudo Genes (frameshifted)       :: 26 of 107
            Pseudo Genes (incomplete)         :: 83 of 107
            Pseudo Genes (internal stop)      :: 12 of 107
            Pseudo Genes (multiple problems)  :: 13 of 107
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6929490
                     /organism="Burkholderia multivorans"
                     /mol_type="genomic DNA"
                     /strain="BCC0099"
                     /isolation_source="Clinical, respiratory sample"
                     /db_xref="taxon:87883"
                     /geo_loc_name="Canada"
WGS         CADFDE010000001-CADFDE010000062
WGS_SCAFLD  NZ_CADFDE010000001-NZ_CADFDE010000062
//
LOCUS       NZ_CADEYV010000000   8381190 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1762, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADEYV000000000
VERSION     NZ_CADEYV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503415
            Assembly: GCF_902831745.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 8381190)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADEYV000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADEYV000000000.  This version of the
            project (01) has the accession number NZ_CADEYV010000000, and
            consists of sequences CADEYV010000001-CADEYV010000214.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902831745.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:42:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,536
            CDSs (total)                      :: 7,456
            Genes (coding)                    :: 7,257
            CDSs (with protein)               :: 7,257
            Genes (RNA)                       :: 80
            rRNAs                             :: 6, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 66
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 199
            CDSs (without protein)            :: 199
            Pseudo Genes (ambiguous residues) :: 0 of 199
            Pseudo Genes (frameshifted)       :: 54 of 199
            Pseudo Genes (incomplete)         :: 169 of 199
            Pseudo Genes (internal stop)      :: 12 of 199
            Pseudo Genes (multiple problems)  :: 34 of 199
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8381190
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1762"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="USA"
WGS         CADEYV010000001-CADEYV010000214
WGS_SCAFLD  NZ_CADEYV010000001-NZ_CADEYV010000214
//
LOCUS       NZ_CADFCK010000000   8055080 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1871, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADFCK000000000
VERSION     NZ_CADFCK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503522
            Assembly: GCF_902832705.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 8055080)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADFCK000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADFCK000000000.  This version of the
            project (01) has the accession number NZ_CADFCK010000000, and
            consists of sequences CADFCK010000001-CADFCK010000155.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902832705.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:39:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,210
            CDSs (total)                      :: 7,139
            Genes (coding)                    :: 6,953
            CDSs (with protein)               :: 6,953
            Genes (RNA)                       :: 71
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 47 of 186
            Pseudo Genes (incomplete)         :: 150 of 186
            Pseudo Genes (internal stop)      :: 14 of 186
            Pseudo Genes (multiple problems)  :: 25 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8055080
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1871"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="USA"
WGS         CADFCK010000001-CADFCK010000155
WGS_SCAFLD  NZ_CADFCK010000001-NZ_CADFCK010000155
//
LOCUS       NZ_CADFAY010000000   8163255 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1832, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADFAY000000000
VERSION     NZ_CADFAY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503484
            Assembly: GCF_902832215.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 8163255)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADFAY000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADFAY000000000.  This version of the
            project (01) has the accession number NZ_CADFAY010000000, and
            consists of sequences CADFAY010000001-CADFAY010000135.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902832215.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:46:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,258
            CDSs (total)                      :: 7,183
            Genes (coding)                    :: 7,003
            CDSs (with protein)               :: 7,003
            Genes (RNA)                       :: 75
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 180
            CDSs (without protein)            :: 180
            Pseudo Genes (ambiguous residues) :: 0 of 180
            Pseudo Genes (frameshifted)       :: 54 of 180
            Pseudo Genes (incomplete)         :: 157 of 180
            Pseudo Genes (internal stop)      :: 12 of 180
            Pseudo Genes (multiple problems)  :: 41 of 180
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8163255
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1832"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="USA"
WGS         CADFAY010000001-CADFAY010000135
WGS_SCAFLD  NZ_CADFAY010000001-NZ_CADFAY010000135
//
LOCUS       NZ_CADEZB010000000   8415774 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1759, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADEZB000000000
VERSION     NZ_CADEZB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503412
            Assembly: GCF_902831785.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 8415774)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADEZB000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADEZB000000000.  This version of the
            project (01) has the accession number NZ_CADEZB010000000, and
            consists of sequences CADEZB010000001-CADEZB010000206.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902831785.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:45:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,550
            CDSs (total)                      :: 7,476
            Genes (coding)                    :: 7,280
            CDSs (with protein)               :: 7,280
            Genes (RNA)                       :: 74
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5 (5S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 196
            CDSs (without protein)            :: 196
            Pseudo Genes (ambiguous residues) :: 0 of 196
            Pseudo Genes (frameshifted)       :: 52 of 196
            Pseudo Genes (incomplete)         :: 166 of 196
            Pseudo Genes (internal stop)      :: 11 of 196
            Pseudo Genes (multiple problems)  :: 30 of 196
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8415774
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1759"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="USA"
WGS         CADEZB010000001-CADEZB010000206
WGS_SCAFLD  NZ_CADEZB010000001-NZ_CADEZB010000206
//
LOCUS       NZ_CADEWN010000000   8114648 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1677, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADEWN000000000
VERSION     NZ_CADEWN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503350
            Assembly: GCF_902831155.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 8114648)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADEWN000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADEWN000000000.  This version of the
            project (01) has the accession number NZ_CADEWN010000000, and
            consists of sequences CADEWN010000001-CADEWN010000041.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902831155.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:50:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,070
            CDSs (total)                      :: 7,001
            Genes (coding)                    :: 6,910
            CDSs (with protein)               :: 6,910
            Genes (RNA)                       :: 69
            rRNAs                             :: 5, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 1 (5S, 16S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 30 of 91
            Pseudo Genes (incomplete)         :: 72 of 91
            Pseudo Genes (internal stop)      :: 8 of 91
            Pseudo Genes (multiple problems)  :: 19 of 91
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8114648
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1677"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="USA"
WGS         CADEWN010000001-CADEWN010000041
WGS_SCAFLD  NZ_CADEWN010000001-NZ_CADEWN010000041
//
LOCUS       NZ_CADEZT010000000   8447785 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1780, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADEZT000000000
VERSION     NZ_CADEZT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503433
            Assembly: GCF_902831945.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 8447785)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADEZT000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADEZT000000000.  This version of the
            project (01) has the accession number NZ_CADEZT010000000, and
            consists of sequences CADEZT010000001-CADEZT010000208.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902831945.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:50:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,611
            CDSs (total)                      :: 7,538
            Genes (coding)                    :: 7,302
            CDSs (with protein)               :: 7,302
            Genes (RNA)                       :: 73
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 236
            CDSs (without protein)            :: 236
            Pseudo Genes (ambiguous residues) :: 0 of 236
            Pseudo Genes (frameshifted)       :: 54 of 236
            Pseudo Genes (incomplete)         :: 202 of 236
            Pseudo Genes (internal stop)      :: 15 of 236
            Pseudo Genes (multiple problems)  :: 33 of 236
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8447785
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1780"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="USA"
WGS         CADEZT010000001-CADEZT010000208
WGS_SCAFLD  NZ_CADEZT010000001-NZ_CADEZT010000208
//
LOCUS       NZ_CADEZD010000000   8370553 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1769, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADEZD000000000
VERSION     NZ_CADEZD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503422
            Assembly: GCF_902831815.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 8370553)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADEZD000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADEZD000000000.  This version of the
            project (01) has the accession number NZ_CADEZD010000000, and
            consists of sequences CADEZD010000001-CADEZD010000225.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902831815.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:49:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,553
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,298
            CDSs (with protein)               :: 7,298
            Genes (RNA)                       :: 74
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 181
            CDSs (without protein)            :: 181
            Pseudo Genes (ambiguous residues) :: 0 of 181
            Pseudo Genes (frameshifted)       :: 54 of 181
            Pseudo Genes (incomplete)         :: 150 of 181
            Pseudo Genes (internal stop)      :: 9 of 181
            Pseudo Genes (multiple problems)  :: 31 of 181
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8370553
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1769"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="USA"
WGS         CADEZD010000001-CADEZD010000225
WGS_SCAFLD  NZ_CADEZD010000001-NZ_CADEZD010000225
//
LOCUS       NZ_CADFAT010000000   8244827 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1828, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADFAT000000000
VERSION     NZ_CADFAT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503480
            Assembly: GCF_902832375.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 8244827)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADFAT000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADFAT000000000.  This version of the
            project (01) has the accession number NZ_CADFAT010000000, and
            consists of sequences CADFAT010000001-CADFAT010000153.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902832375.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:45:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,365
            CDSs (total)                      :: 7,283
            Genes (coding)                    :: 7,091
            CDSs (with protein)               :: 7,091
            Genes (RNA)                       :: 82
            rRNAs                             :: 5, 1, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 5 (5S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 192
            CDSs (without protein)            :: 192
            Pseudo Genes (ambiguous residues) :: 0 of 192
            Pseudo Genes (frameshifted)       :: 50 of 192
            Pseudo Genes (incomplete)         :: 161 of 192
            Pseudo Genes (internal stop)      :: 18 of 192
            Pseudo Genes (multiple problems)  :: 34 of 192
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8244827
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1828"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="Canada"
WGS         CADFAT010000001-CADFAT010000153
WGS_SCAFLD  NZ_CADFAT010000001-NZ_CADFAT010000153
//
LOCUS       NZ_JAGXDW010000000   6794969 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia multivorans strain 16250, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAGXDW000000000
VERSION     NZ_JAGXDW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN19006159
            Assembly: GCF_024146455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia multivorans
  ORGANISM  Burkholderia multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 6794969)
  AUTHORS   Chi,X.
  TITLE     Analysis of the genomic characteristics of Burkholder related to
            respiratory diseases
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6794969)
  AUTHORS   Chi,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-MAY-2021) Internal Medicine, Zhejiang University,
            Qingchun Road 79, Hangzhou 310002, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGXDW000000000.1.
            The Burkholderia multivorans whole genome shotgun (WGS) project has
            the project accession NZ_JAGXDW000000000.  This version of the
            project (01) has the accession number NZ_JAGXDW010000000, and
            consists of sequences JAGXDW010000001-JAGXDW010000060.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 3.10.26
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 300x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_024146455.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:56:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,273
            CDSs (total)                      :: 6,197
            Genes (coding)                    :: 6,096
            CDSs (with protein)               :: 6,096
            Genes (RNA)                       :: 76
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 4 (16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 101
            CDSs (without protein)            :: 101
            Pseudo Genes (ambiguous residues) :: 0 of 101
            Pseudo Genes (frameshifted)       :: 32 of 101
            Pseudo Genes (incomplete)         :: 78 of 101
            Pseudo Genes (internal stop)      :: 10 of 101
            Pseudo Genes (multiple problems)  :: 19 of 101
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6794969
                     /organism="Burkholderia multivorans"
                     /mol_type="genomic DNA"
                     /strain="16250"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:87883"
                     /geo_loc_name="China: Zhejiang, Hangzhou"
                     /lat_lon="30 N 120 E"
                     /collection_date="2014-01-19"
                     /collected_by="Hao Xu"
WGS         JAGXDW010000001-JAGXDW010000060
WGS_SCAFLD  NZ_JAGXDW010000001-NZ_JAGXDW010000060
//
LOCUS       NZ_CAJHDV010000000   6773647 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia multivorans isolate BCC0225, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CAJHDV000000000
VERSION     NZ_CAJHDV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7049035
            Assembly: GCF_904850955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia multivorans
  ORGANISM  Burkholderia multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 6773647)
  AUTHORS   Parfitt M,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2020) CARDIFF UNIVERSITY, Microbiomes, Microbes
            and Informatics, School of Biosciences, Sir Martin Evans Building,
            The, Museum Ave, Cardiff CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAJHDV000000000.1.
            The Burkholderia multivorans whole genome shotgun (WGS) project has
            the project accession NZ_CAJHDV000000000.  This version of the
            project (01) has the accession number NZ_CAJHDV010000000, and
            consists of sequences CAJHDV010000001-CAJHDV010000059.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_904850955.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:59:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,289
            CDSs (total)                      :: 6,222
            Genes (coding)                    :: 6,124
            CDSs (with protein)               :: 6,124
            Genes (RNA)                       :: 67
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 98
            CDSs (without protein)            :: 98
            Pseudo Genes (ambiguous residues) :: 0 of 98
            Pseudo Genes (frameshifted)       :: 35 of 98
            Pseudo Genes (incomplete)         :: 70 of 98
            Pseudo Genes (internal stop)      :: 9 of 98
            Pseudo Genes (multiple problems)  :: 15 of 98
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6773647
                     /organism="Burkholderia multivorans"
                     /mol_type="genomic DNA"
                     /isolate="BCC0225"
                     /db_xref="taxon:87883"
WGS         CAJHDV010000001-CAJHDV010000059
WGS_SCAFLD  NZ_CAJHDV010000001-NZ_CAJHDV010000059
//
LOCUS       NZ_JAGXDU010000000   6795423 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia multivorans strain 16318, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAGXDU000000000
VERSION     NZ_JAGXDU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN19006161
            Assembly: GCF_024146465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia multivorans
  ORGANISM  Burkholderia multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 6795423)
  AUTHORS   Chi,X.
  TITLE     Analysis of the genomic characteristics of Burkholder related to
            respiratory diseases
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6795423)
  AUTHORS   Chi,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-MAY-2021) Internal Medicine, Zhejiang University,
            Qingchun Road 79, Hangzhou 310002, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGXDU000000000.1.
            The Burkholderia multivorans whole genome shotgun (WGS) project has
            the project accession NZ_JAGXDU000000000.  This version of the
            project (01) has the accession number NZ_JAGXDU010000000, and
            consists of sequences JAGXDU010000001-JAGXDU010000059.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 3.10.28
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 300x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_024146465.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:05:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,273
            CDSs (total)                      :: 6,195
            Genes (coding)                    :: 6,089
            CDSs (with protein)               :: 6,089
            Genes (RNA)                       :: 78
            rRNAs                             :: 5, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5, 5 (16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 106
            CDSs (without protein)            :: 106
            Pseudo Genes (ambiguous residues) :: 0 of 106
            Pseudo Genes (frameshifted)       :: 34 of 106
            Pseudo Genes (incomplete)         :: 83 of 106
            Pseudo Genes (internal stop)      :: 10 of 106
            Pseudo Genes (multiple problems)  :: 21 of 106
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6795423
                     /organism="Burkholderia multivorans"
                     /mol_type="genomic DNA"
                     /strain="16318"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:87883"
                     /geo_loc_name="China: Zhejiang, Hangzhou"
                     /lat_lon="30 N 120 E"
                     /collection_date="2014-01-21"
                     /collected_by="Hao Xu"
WGS         JAGXDU010000001-JAGXDU010000059
WGS_SCAFLD  NZ_JAGXDU010000001-NZ_JAGXDU010000059
//
LOCUS       NZ_CADFCH010000000   8352476 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1870, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADFCH000000000
VERSION     NZ_CADFCH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503521
            Assembly: GCF_902832645.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 8352476)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADFCH000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADFCH000000000.  This version of the
            project (01) has the accession number NZ_CADFCH010000000, and
            consists of sequences CADFCH010000001-CADFCH010000182.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902832645.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:01:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,500
            CDSs (total)                      :: 7,428
            Genes (coding)                    :: 7,193
            CDSs (with protein)               :: 7,193
            Genes (RNA)                       :: 72
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 235
            CDSs (without protein)            :: 235
            Pseudo Genes (ambiguous residues) :: 0 of 235
            Pseudo Genes (frameshifted)       :: 51 of 235
            Pseudo Genes (incomplete)         :: 195 of 235
            Pseudo Genes (internal stop)      :: 23 of 235
            Pseudo Genes (multiple problems)  :: 33 of 235
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8352476
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1870"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="USA"
WGS         CADFCH010000001-CADFCH010000182
WGS_SCAFLD  NZ_CADFCH010000001-NZ_CADFCH010000182
//
LOCUS       NZ_CADEZU010000000   7993777 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1781, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADEZU000000000
VERSION     NZ_CADEZU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503434
            Assembly: GCF_902831975.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 7993777)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADEZU000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADEZU000000000.  This version of the
            project (01) has the accession number NZ_CADEZU010000000, and
            consists of sequences CADEZU010000001-CADEZU010000195.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902831975.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:58:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,134
            CDSs (total)                      :: 7,059
            Genes (coding)                    :: 6,865
            CDSs (with protein)               :: 6,865
            Genes (RNA)                       :: 75
            rRNAs                             :: 6, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5, 2 (5S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 194
            CDSs (without protein)            :: 194
            Pseudo Genes (ambiguous residues) :: 0 of 194
            Pseudo Genes (frameshifted)       :: 43 of 194
            Pseudo Genes (incomplete)         :: 156 of 194
            Pseudo Genes (internal stop)      :: 20 of 194
            Pseudo Genes (multiple problems)  :: 23 of 194
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7993777
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1781"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="USA"
WGS         CADEZU010000001-CADEZU010000195
WGS_SCAFLD  NZ_CADEZU010000001-NZ_CADEZU010000195
//
LOCUS       NZ_JAGXDH010000000   6759969 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia multivorans strain 16949, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAGXDH000000000
VERSION     NZ_JAGXDH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN19006174
            Assembly: GCF_024146025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia multivorans
  ORGANISM  Burkholderia multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 6759969)
  AUTHORS   Chi,X.
  TITLE     Analysis of the genomic characteristics of Burkholder related to
            respiratory diseases
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6759969)
  AUTHORS   Chi,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-MAY-2021) Internal Medicine, Zhejiang University,
            Qingchun Road 79, Hangzhou 310002, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGXDH000000000.1.
            The Burkholderia multivorans whole genome shotgun (WGS) project has
            the project accession NZ_JAGXDH000000000.  This version of the
            project (01) has the accession number NZ_JAGXDH010000000, and
            consists of sequences JAGXDH010000001-JAGXDH010000091.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 3.10.41
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 300x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_024146025.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:05:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,177
            CDSs (total)                      :: 6,108
            Genes (coding)                    :: 5,999
            CDSs (with protein)               :: 5,999
            Genes (RNA)                       :: 69
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5 (5S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 39 of 109
            Pseudo Genes (incomplete)         :: 82 of 109
            Pseudo Genes (internal stop)      :: 9 of 109
            Pseudo Genes (multiple problems)  :: 21 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6759969
                     /organism="Burkholderia multivorans"
                     /mol_type="genomic DNA"
                     /strain="16949"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:87883"
                     /geo_loc_name="China: Zhejiang, Hangzhou"
                     /lat_lon="30 N 120 E"
                     /collection_date="2014-02-23"
                     /collected_by="Hao Xu"
WGS         JAGXDH010000001-JAGXDH010000091
WGS_SCAFLD  NZ_JAGXDH010000001-NZ_JAGXDH010000091
//
LOCUS       NZ_JAGXDO010000000   6759627 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia multivorans strain 16505, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAGXDO000000000
VERSION     NZ_JAGXDO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN19006167
            Assembly: GCF_024146185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia multivorans
  ORGANISM  Burkholderia multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 6759627)
  AUTHORS   Chi,X.
  TITLE     Analysis of the genomic characteristics of Burkholder related to
            respiratory diseases
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6759627)
  AUTHORS   Chi,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-MAY-2021) Internal Medicine, Zhejiang University,
            Qingchun Road 79, Hangzhou 310002, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGXDO000000000.1.
            The Burkholderia multivorans whole genome shotgun (WGS) project has
            the project accession NZ_JAGXDO000000000.  This version of the
            project (01) has the accession number NZ_JAGXDO010000000, and
            consists of sequences JAGXDO010000001-JAGXDO010000137.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 3.10.34
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 300x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_024146185.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:02:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,205
            CDSs (total)                      :: 6,134
            Genes (coding)                    :: 6,012
            CDSs (with protein)               :: 6,012
            Genes (RNA)                       :: 71
            rRNAs                             :: 6, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5, 2 (5S, 16S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 122
            CDSs (without protein)            :: 122
            Pseudo Genes (ambiguous residues) :: 0 of 122
            Pseudo Genes (frameshifted)       :: 39 of 122
            Pseudo Genes (incomplete)         :: 95 of 122
            Pseudo Genes (internal stop)      :: 9 of 122
            Pseudo Genes (multiple problems)  :: 21 of 122
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6759627
                     /organism="Burkholderia multivorans"
                     /mol_type="genomic DNA"
                     /strain="16505"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:87883"
                     /geo_loc_name="China: Zhejiang, Hangzhou"
                     /lat_lon="30 N 120 E"
                     /collection_date="2014-02-07"
                     /collected_by="Hao Xu"
WGS         JAGXDO010000001-JAGXDO010000137
WGS_SCAFLD  NZ_JAGXDO010000001-NZ_JAGXDO010000137
//
LOCUS       NZ_JAGXDT010000000   6757907 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia multivorans strain 16328, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAGXDT000000000
VERSION     NZ_JAGXDT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN19006162
            Assembly: GCF_024146345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia multivorans
  ORGANISM  Burkholderia multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 6757907)
  AUTHORS   Chi,X.
  TITLE     Analysis of the genomic characteristics of Burkholder related to
            respiratory diseases
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6757907)
  AUTHORS   Chi,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-MAY-2021) Internal Medicine, Zhejiang University,
            Qingchun Road 79, Hangzhou 310002, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGXDT000000000.1.
            The Burkholderia multivorans whole genome shotgun (WGS) project has
            the project accession NZ_JAGXDT000000000.  This version of the
            project (01) has the accession number NZ_JAGXDT010000000, and
            consists of sequences JAGXDT010000001-JAGXDT010000078.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 3.10.29
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 300x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_024146345.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:13:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,170
            CDSs (total)                      :: 6,101
            Genes (coding)                    :: 5,995
            CDSs (with protein)               :: 5,995
            Genes (RNA)                       :: 69
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5 (5S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 106
            CDSs (without protein)            :: 106
            Pseudo Genes (ambiguous residues) :: 0 of 106
            Pseudo Genes (frameshifted)       :: 38 of 106
            Pseudo Genes (incomplete)         :: 80 of 106
            Pseudo Genes (internal stop)      :: 9 of 106
            Pseudo Genes (multiple problems)  :: 21 of 106
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6757907
                     /organism="Burkholderia multivorans"
                     /mol_type="genomic DNA"
                     /strain="16328"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:87883"
                     /geo_loc_name="China: Zhejiang, Hangzhou"
                     /lat_lon="30 N 120 E"
                     /collection_date="2014-01-25"
                     /collected_by="Hao Xu"
WGS         JAGXDT010000001-JAGXDT010000078
WGS_SCAFLD  NZ_JAGXDT010000001-NZ_JAGXDT010000078
//
LOCUS       NZ_JAGXDJ010000000   6759238 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia multivorans strain 16693, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAGXDJ000000000
VERSION     NZ_JAGXDJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN19006172
            Assembly: GCF_024145945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia multivorans
  ORGANISM  Burkholderia multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 6759238)
  AUTHORS   Chi,X.
  TITLE     Analysis of the genomic characteristics of Burkholder related to
            respiratory diseases
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6759238)
  AUTHORS   Chi,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-MAY-2021) Internal Medicine, Zhejiang University,
            Qingchun Road 79, Hangzhou 310002, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGXDJ000000000.1.
            The Burkholderia multivorans whole genome shotgun (WGS) project has
            the project accession NZ_JAGXDJ000000000.  This version of the
            project (01) has the accession number NZ_JAGXDJ010000000, and
            consists of sequences JAGXDJ010000001-JAGXDJ010000119.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 3.10.39
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 300x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_024145945.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:09:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,201
            CDSs (total)                      :: 6,132
            Genes (coding)                    :: 6,018
            CDSs (with protein)               :: 6,018
            Genes (RNA)                       :: 69
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5 (5S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 114
            CDSs (without protein)            :: 114
            Pseudo Genes (ambiguous residues) :: 0 of 114
            Pseudo Genes (frameshifted)       :: 38 of 114
            Pseudo Genes (incomplete)         :: 88 of 114
            Pseudo Genes (internal stop)      :: 9 of 114
            Pseudo Genes (multiple problems)  :: 21 of 114
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6759238
                     /organism="Burkholderia multivorans"
                     /mol_type="genomic DNA"
                     /strain="16693"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:87883"
                     /geo_loc_name="China: Zhejiang, Hangzhou"
                     /lat_lon="30 N 120 E"
                     /collection_date="2014-02-13"
                     /collected_by="Hao Xu"
WGS         JAGXDJ010000001-JAGXDJ010000119
WGS_SCAFLD  NZ_JAGXDJ010000001-NZ_JAGXDJ010000119
//
LOCUS       NZ_JAGXDQ010000000   6759038 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia multivorans strain 16399, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAGXDQ000000000
VERSION     NZ_JAGXDQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN19006165
            Assembly: GCF_024146265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia multivorans
  ORGANISM  Burkholderia multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 6759038)
  AUTHORS   Chi,X.
  TITLE     Analysis of the genomic characteristics of Burkholder related to
            respiratory diseases
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6759038)
  AUTHORS   Chi,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-MAY-2021) Internal Medicine, Zhejiang University,
            Qingchun Road 79, Hangzhou 310002, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGXDQ000000000.1.
            The Burkholderia multivorans whole genome shotgun (WGS) project has
            the project accession NZ_JAGXDQ000000000.  This version of the
            project (01) has the accession number NZ_JAGXDQ010000000, and
            consists of sequences JAGXDQ010000001-JAGXDQ010000092.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 3.10.32
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 300x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_024146265.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:08:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,176
            CDSs (total)                      :: 6,107
            Genes (coding)                    :: 5,998
            CDSs (with protein)               :: 5,998
            Genes (RNA)                       :: 69
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5 (5S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 38 of 109
            Pseudo Genes (incomplete)         :: 83 of 109
            Pseudo Genes (internal stop)      :: 9 of 109
            Pseudo Genes (multiple problems)  :: 21 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6759038
                     /organism="Burkholderia multivorans"
                     /mol_type="genomic DNA"
                     /strain="16399"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:87883"
                     /geo_loc_name="China: Zhejiang, Hangzhou"
                     /lat_lon="30 N 120 E"
                     /collection_date="2014-02-04"
                     /collected_by="Hao Xu"
WGS         JAGXDQ010000001-JAGXDQ010000092
WGS_SCAFLD  NZ_JAGXDQ010000001-NZ_JAGXDQ010000092
//
LOCUS       NZ_CAJHEI010000000   6991234 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia multivorans isolate BCC0079, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CAJHEI000000000
VERSION     NZ_CAJHEI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7049001
            Assembly: GCF_904852145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia multivorans
  ORGANISM  Burkholderia multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 6991234)
  AUTHORS   Parfitt M,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2020) CARDIFF UNIVERSITY, Microbiomes, Microbes
            and Informatics, School of Biosciences, Sir Martin Evans Building,
            The, Museum Ave, Cardiff CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAJHEI000000000.1.
            The Burkholderia multivorans whole genome shotgun (WGS) project has
            the project accession NZ_CAJHEI000000000.  This version of the
            project (01) has the accession number NZ_CAJHEI010000000, and
            consists of sequences CAJHEI010000001-CAJHEI010000082.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_904852145.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:09:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,436
            CDSs (total)                      :: 6,369
            Genes (coding)                    :: 6,282
            CDSs (with protein)               :: 6,282
            Genes (RNA)                       :: 67
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 87
            CDSs (without protein)            :: 87
            Pseudo Genes (ambiguous residues) :: 0 of 87
            Pseudo Genes (frameshifted)       :: 26 of 87
            Pseudo Genes (incomplete)         :: 66 of 87
            Pseudo Genes (internal stop)      :: 13 of 87
            Pseudo Genes (multiple problems)  :: 17 of 87
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6991234
                     /organism="Burkholderia multivorans"
                     /mol_type="genomic DNA"
                     /isolate="BCC0079"
                     /db_xref="taxon:87883"
WGS         CAJHEI010000001-CAJHEI010000082
WGS_SCAFLD  NZ_CAJHEI010000001-NZ_CAJHEI010000082
//
LOCUS       NZ_CAMUPK010000000   7008829 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia multivorans isolate BCC1272_complete, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CAMUPK000000000
VERSION     NZ_CAMUPK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA111477687
            Assembly: GCF_947090795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia multivorans
  ORGANISM  Burkholderia multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 7008829)
  AUTHORS   Parfitt M,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) CARDIFF UNIVERSITY, Microbiomes, Microbes
            and Informatics, School of Biosciences, Sir Martin Evans Building,
            The, Museum Ave, Cardiff CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAMUPK000000000.1.
            The Burkholderia multivorans whole genome shotgun (WGS) project has
            the project accession NZ_CAMUPK000000000.  This version of the
            project (01) has the accession number NZ_CAMUPK010000000, and
            consists of sequences CAMUPK010000001-CAMUPK010000004.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_947090795.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:06:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,505
            CDSs (total)                      :: 6,420
            Genes (coding)                    :: 6,297
            CDSs (with protein)               :: 6,297
            Genes (RNA)                       :: 85
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 31 of 123
            Pseudo Genes (incomplete)         :: 99 of 123
            Pseudo Genes (internal stop)      :: 13 of 123
            Pseudo Genes (multiple problems)  :: 17 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7008829
                     /organism="Burkholderia multivorans"
                     /mol_type="genomic DNA"
                     /isolate="BCC1272_complete"
                     /db_xref="taxon:87883"
WGS         CAMUPK010000001-CAMUPK010000004
WGS_SCAFLD  NZ_CAMUPK010000001-NZ_CAMUPK010000004
//
LOCUS       NZ_CAJHDF010000000   6789721 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia multivorans isolate BCC0497, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CAJHDF000000000
VERSION     NZ_CAJHDF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7049021
            Assembly: GCF_904850245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia multivorans
  ORGANISM  Burkholderia multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 6789721)
  AUTHORS   Parfitt M,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2020) CARDIFF UNIVERSITY, Microbiomes, Microbes
            and Informatics, School of Biosciences, Sir Martin Evans Building,
            The, Museum Ave, Cardiff CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAJHDF000000000.1.
            The Burkholderia multivorans whole genome shotgun (WGS) project has
            the project accession NZ_CAJHDF000000000.  This version of the
            project (01) has the accession number NZ_CAJHDF010000000, and
            consists of sequences CAJHDF010000001-CAJHDF010000097.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_904850245.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:12:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,255
            CDSs (total)                      :: 6,191
            Genes (coding)                    :: 6,098
            CDSs (with protein)               :: 6,098
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 93
            CDSs (without protein)            :: 93
            Pseudo Genes (ambiguous residues) :: 0 of 93
            Pseudo Genes (frameshifted)       :: 34 of 93
            Pseudo Genes (incomplete)         :: 74 of 93
            Pseudo Genes (internal stop)      :: 11 of 93
            Pseudo Genes (multiple problems)  :: 21 of 93
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6789721
                     /organism="Burkholderia multivorans"
                     /mol_type="genomic DNA"
                     /isolate="BCC0497"
                     /db_xref="taxon:87883"
WGS         CAJHDF010000001-CAJHDF010000097
WGS_SCAFLD  NZ_CAJHDF010000001-NZ_CAJHDF010000097
//
LOCUS       NZ_CADEXK010000000   8014120 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia gladioli strain BCC1707, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CADEXK000000000
VERSION     NZ_CADEXK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6503379
            Assembly: GCF_902831505.1
KEYWORDS    WGS; RefSeq; TPA:assembly.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (bases 1 to 8014120)
  AUTHORS   Mullins,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) CARDIFF SCHOOL OF BIOSCIENCES, Microbiomes,
            Microbes and Informatics, The Sir Martin Evans Building, Museum
            Avenue, Cardiff, CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADEXK000000000.1.
            The Burkholderia gladioli whole genome shotgun (WGS) project has
            the project accession NZ_CADEXK000000000.  This version of the
            project (01) has the accession number NZ_CADEXK010000000, and
            consists of sequences CADEXK010000001-CADEXK010000042.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902831505.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:07:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,949
            CDSs (total)                      :: 6,876
            Genes (coding)                    :: 6,789
            CDSs (with protein)               :: 6,789
            Genes (RNA)                       :: 73
            rRNAs                             :: 6, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 87
            CDSs (without protein)            :: 87
            Pseudo Genes (ambiguous residues) :: 0 of 87
            Pseudo Genes (frameshifted)       :: 26 of 87
            Pseudo Genes (incomplete)         :: 74 of 87
            Pseudo Genes (internal stop)      :: 10 of 87
            Pseudo Genes (multiple problems)  :: 20 of 87
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8014120
                     /organism="Burkholderia gladioli"
                     /mol_type="genomic DNA"
                     /strain="BCC1707"
                     /isolation_source="Clinical"
                     /db_xref="taxon:28095"
                     /geo_loc_name="USA"
WGS         CADEXK010000001-CADEXK010000042
WGS_SCAFLD  NZ_CADEXK010000001-NZ_CADEXK010000042
//
LOCUS       NZ_JBCGCH010000000   1681586 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Campylobacter coli strain XS04, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCGCH000000000
VERSION     NZ_JBCGCH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34134760
            Assembly: GCF_038440695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1681586)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Genetic diversity and antibiotic resistance characteristics of
            Campylobacter in laying hen farms in Hubei province
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1681586)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2023) Hubei Provincial Key Laboratory of Animal
            Pathogenic Microbiology, Institute of Animal Husbandry and
            Veterinary, Hubei Academy of Agricultural Sciences, Nanhu Avenue,
            Wuhan, Hubei 430064, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCGCH000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JBCGCH000000000.  This version of the project
            (01) has the accession number NZ_JBCGCH010000000, and consists of
            sequences JBCGCH010000001-JBCGCH010000012.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038440695.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:24:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,778
            CDSs (total)                      :: 1,732
            Genes (coding)                    :: 1,689
            CDSs (with protein)               :: 1,689
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 21 of 43
            Pseudo Genes (incomplete)         :: 20 of 43
            Pseudo Genes (internal stop)      :: 6 of 43
            Pseudo Genes (multiple problems)  :: 4 of 43
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1681586
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="XS04"
                     /host="laying hen"
                     /db_xref="taxon:195"
                     /geo_loc_name="China: Huanggang"
                     /collection_date="2022-07"
WGS         JBCGCH010000001-JBCGCH010000012
WGS_SCAFLD  NZ_JBCGCH010000001-NZ_JBCGCH010000012
//
LOCUS       NZ_JBCGCF010000000   1694003 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Campylobacter coli strain XS02, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCGCF000000000
VERSION     NZ_JBCGCF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34134758
            Assembly: GCF_038440725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1694003)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Genetic diversity and antibiotic resistance characteristics of
            Campylobacter in laying hen farms in Hubei province
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1694003)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2023) Hubei Provincial Key Laboratory of Animal
            Pathogenic Microbiology, Institute of Animal Husbandry and
            Veterinary, Hubei Academy of Agricultural Sciences, Nanhu Avenue,
            Wuhan, Hubei 430064, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCGCF000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JBCGCF000000000.  This version of the project
            (01) has the accession number NZ_JBCGCF010000000, and consists of
            sequences JBCGCF010000001-JBCGCF010000020.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038440725.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:27:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,783
            CDSs (total)                      :: 1,737
            Genes (coding)                    :: 1,695
            CDSs (with protein)               :: 1,695
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 20 of 42
            Pseudo Genes (incomplete)         :: 20 of 42
            Pseudo Genes (internal stop)      :: 6 of 42
            Pseudo Genes (multiple problems)  :: 4 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694003
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="XS02"
                     /host="laying hen"
                     /db_xref="taxon:195"
                     /geo_loc_name="China: Huanggang"
                     /collection_date="2022-07"
WGS         JBCGCF010000001-JBCGCF010000020
WGS_SCAFLD  NZ_JBCGCF010000001-NZ_JBCGCF010000020
//
LOCUS       NZ_JBCGCB010000000   1784984 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Campylobacter coli strain XZ01, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCGCB000000000
VERSION     NZ_JBCGCB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34134753
            Assembly: GCF_038440835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1784984)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Genetic diversity and antibiotic resistance characteristics of
            Campylobacter in laying hen farms in Hubei province
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1784984)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2023) Hubei Provincial Key Laboratory of Animal
            Pathogenic Microbiology, Institute of Animal Husbandry and
            Veterinary, Hubei Academy of Agricultural Sciences, Nanhu Avenue,
            Wuhan, Hubei 430064, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCGCB000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JBCGCB000000000.  This version of the project
            (01) has the accession number NZ_JBCGCB010000000, and consists of
            sequences JBCGCB010000001-JBCGCB010000028.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038440835.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:29:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,920
            CDSs (total)                      :: 1,872
            Genes (coding)                    :: 1,817
            CDSs (with protein)               :: 1,817
            Genes (RNA)                       :: 48
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 55
            CDSs (without protein)            :: 55
            Pseudo Genes (ambiguous residues) :: 0 of 55
            Pseudo Genes (frameshifted)       :: 19 of 55
            Pseudo Genes (incomplete)         :: 33 of 55
            Pseudo Genes (internal stop)      :: 8 of 55
            Pseudo Genes (multiple problems)  :: 5 of 55
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1784984
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="XZ01"
                     /host="laying hen"
                     /db_xref="taxon:195"
                     /geo_loc_name="China: Wuhan"
                     /collection_date="2022-07"
WGS         JBCGCB010000001-JBCGCB010000028
WGS_SCAFLD  NZ_JBCGCB010000001-NZ_JBCGCB010000028
//
LOCUS       NZ_JBCGCD010000000   1785222 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Campylobacter coli strain XZ03, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCGCD000000000
VERSION     NZ_JBCGCD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34134755
            Assembly: GCF_038440775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1785222)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Genetic diversity and antibiotic resistance characteristics of
            Campylobacter in laying hen farms in Hubei province
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1785222)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2023) Hubei Provincial Key Laboratory of Animal
            Pathogenic Microbiology, Institute of Animal Husbandry and
            Veterinary, Hubei Academy of Agricultural Sciences, Nanhu Avenue,
            Wuhan, Hubei 430064, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCGCD000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JBCGCD000000000.  This version of the project
            (01) has the accession number NZ_JBCGCD010000000, and consists of
            sequences JBCGCD010000001-JBCGCD010000026.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038440775.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:30:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,921
            CDSs (total)                      :: 1,873
            Genes (coding)                    :: 1,818
            CDSs (with protein)               :: 1,818
            Genes (RNA)                       :: 48
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 55
            CDSs (without protein)            :: 55
            Pseudo Genes (ambiguous residues) :: 0 of 55
            Pseudo Genes (frameshifted)       :: 23 of 55
            Pseudo Genes (incomplete)         :: 30 of 55
            Pseudo Genes (internal stop)      :: 8 of 55
            Pseudo Genes (multiple problems)  :: 6 of 55
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1785222
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="XZ03"
                     /host="laying hen"
                     /db_xref="taxon:195"
                     /geo_loc_name="China: Wuhan"
                     /collection_date="2022-07"
WGS         JBCGCD010000001-JBCGCD010000026
WGS_SCAFLD  NZ_JBCGCD010000001-NZ_JBCGCD010000026
//
LOCUS       NZ_JBCGCA010000000   1716897 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Campylobacter coli strain JZ10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCGCA000000000
VERSION     NZ_JBCGCA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34134752
            Assembly: GCF_038440815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1716897)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Genetic diversity and antibiotic resistance characteristics of
            Campylobacter in laying hen farms in Hubei province
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1716897)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2023) Hubei Provincial Key Laboratory of Animal
            Pathogenic Microbiology, Institute of Animal Husbandry and
            Veterinary, Hubei Academy of Agricultural Sciences, Nanhu Avenue,
            Wuhan, Hubei 430064, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCGCA000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JBCGCA000000000.  This version of the project
            (01) has the accession number NZ_JBCGCA010000000, and consists of
            sequences JBCGCA010000001-JBCGCA010000016.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038440815.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:31:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,807
            CDSs (total)                      :: 1,761
            Genes (coding)                    :: 1,708
            CDSs (with protein)               :: 1,708
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 28 of 53
            Pseudo Genes (incomplete)         :: 22 of 53
            Pseudo Genes (internal stop)      :: 9 of 53
            Pseudo Genes (multiple problems)  :: 6 of 53
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1716897
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="JZ10"
                     /host="laying hen"
                     /db_xref="taxon:195"
                     /geo_loc_name="China: Jingzhou"
                     /collection_date="2022-06"
WGS         JBCGCA010000001-JBCGCA010000016
WGS_SCAFLD  NZ_JBCGCA010000001-NZ_JBCGCA010000016
//
LOCUS       NZ_JBCGCG010000000   1681466 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Campylobacter coli strain XS03, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCGCG000000000
VERSION     NZ_JBCGCG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34134759
            Assembly: GCF_038440715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1681466)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Genetic diversity and antibiotic resistance characteristics of
            Campylobacter in laying hen farms in Hubei province
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1681466)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2023) Hubei Provincial Key Laboratory of Animal
            Pathogenic Microbiology, Institute of Animal Husbandry and
            Veterinary, Hubei Academy of Agricultural Sciences, Nanhu Avenue,
            Wuhan, Hubei 430064, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCGCG000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JBCGCG000000000.  This version of the project
            (01) has the accession number NZ_JBCGCG010000000, and consists of
            sequences JBCGCG010000001-JBCGCG010000012.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038440715.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:24:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,778
            CDSs (total)                      :: 1,732
            Genes (coding)                    :: 1,690
            CDSs (with protein)               :: 1,690
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 20 of 42
            Pseudo Genes (incomplete)         :: 20 of 42
            Pseudo Genes (internal stop)      :: 6 of 42
            Pseudo Genes (multiple problems)  :: 4 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1681466
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="XS03"
                     /host="laying hen"
                     /db_xref="taxon:195"
                     /geo_loc_name="China: Huanggang"
                     /collection_date="2022-07"
WGS         JBCGCG010000001-JBCGCG010000012
WGS_SCAFLD  NZ_JBCGCG010000001-NZ_JBCGCG010000012
//
LOCUS       NZ_CAJORK010000000   6992326 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Burkholderia multivorans isolate BCC0470, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CAJORK000000000
VERSION     NZ_CAJORK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7777230
            Assembly: GCF_905332585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Burkholderia multivorans
  ORGANISM  Burkholderia multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (bases 1 to 6992326)
  AUTHORS   Parfitt M,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2021) CARDIFF UNIVERSITY, Microbiomes, Microbes
            and Informatics, School of Biosciences, Sir Martin Evans Building,
            The, Museum Ave, Cardiff CF10 3AX, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAJORK000000000.1.
            The Burkholderia multivorans whole genome shotgun (WGS) project has
            the project accession NZ_CAJORK000000000.  This version of the
            project (01) has the accession number NZ_CAJORK010000000, and
            consists of sequences CAJORK010000001-CAJORK010000091.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_905332585.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:28:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,439
            CDSs (total)                      :: 6,371
            Genes (coding)                    :: 6,281
            CDSs (with protein)               :: 6,281
            Genes (RNA)                       :: 68
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 90
            CDSs (without protein)            :: 90
            Pseudo Genes (ambiguous residues) :: 0 of 90
            Pseudo Genes (frameshifted)       :: 26 of 90
            Pseudo Genes (incomplete)         :: 69 of 90
            Pseudo Genes (internal stop)      :: 13 of 90
            Pseudo Genes (multiple problems)  :: 17 of 90
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6992326
                     /organism="Burkholderia multivorans"
                     /mol_type="genomic DNA"
                     /isolate="BCC0470"
                     /db_xref="taxon:87883"
WGS         CAJORK010000001-CAJORK010000091
WGS_SCAFLD  NZ_CAJORK010000001-NZ_CAJORK010000091
//
LOCUS       NZ_JBCGCI010000000   1681311 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Campylobacter coli strain XS05, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCGCI000000000
VERSION     NZ_JBCGCI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34134761
            Assembly: GCF_038440675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1681311)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Genetic diversity and antibiotic resistance characteristics of
            Campylobacter in laying hen farms in Hubei province
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1681311)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2023) Hubei Provincial Key Laboratory of Animal
            Pathogenic Microbiology, Institute of Animal Husbandry and
            Veterinary, Hubei Academy of Agricultural Sciences, Nanhu Avenue,
            Wuhan, Hubei 430064, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCGCI000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JBCGCI000000000.  This version of the project
            (01) has the accession number NZ_JBCGCI010000000, and consists of
            sequences JBCGCI010000001-JBCGCI010000012.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038440675.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:32:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,778
            CDSs (total)                      :: 1,732
            Genes (coding)                    :: 1,689
            CDSs (with protein)               :: 1,689
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 21 of 43
            Pseudo Genes (incomplete)         :: 20 of 43
            Pseudo Genes (internal stop)      :: 6 of 43
            Pseudo Genes (multiple problems)  :: 4 of 43
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1681311
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="XS05"
                     /host="laying hen"
                     /db_xref="taxon:195"
                     /geo_loc_name="China: Huanggang"
                     /collection_date="2022-07"
WGS         JBCGCI010000001-JBCGCI010000012
WGS_SCAFLD  NZ_JBCGCI010000001-NZ_JBCGCI010000012
//
LOCUS       NZ_JBCGCE010000000   1681404 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Campylobacter coli strain XS01, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCGCE000000000
VERSION     NZ_JBCGCE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34134757
            Assembly: GCF_038440755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1681404)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Genetic diversity and antibiotic resistance characteristics of
            Campylobacter in laying hen farms in Hubei province
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1681404)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2023) Hubei Provincial Key Laboratory of Animal
            Pathogenic Microbiology, Institute of Animal Husbandry and
            Veterinary, Hubei Academy of Agricultural Sciences, Nanhu Avenue,
            Wuhan, Hubei 430064, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCGCE000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JBCGCE000000000.  This version of the project
            (01) has the accession number NZ_JBCGCE010000000, and consists of
            sequences JBCGCE010000001-JBCGCE010000012.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038440755.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:30:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,777
            CDSs (total)                      :: 1,731
            Genes (coding)                    :: 1,689
            CDSs (with protein)               :: 1,689
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 20 of 42
            Pseudo Genes (incomplete)         :: 20 of 42
            Pseudo Genes (internal stop)      :: 6 of 42
            Pseudo Genes (multiple problems)  :: 4 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1681404
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="XS01"
                     /host="laying hen"
                     /db_xref="taxon:195"
                     /geo_loc_name="China: Huanggang"
                     /collection_date="2022-07"
WGS         JBCGCE010000001-JBCGCE010000012
WGS_SCAFLD  NZ_JBCGCE010000001-NZ_JBCGCE010000012
//
LOCUS       NZ_AAVN02000000      2439869 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Collinsella aerofaciens ATCC 25986, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AAVN00000000
VERSION     NZ_AAVN00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00627067
            Assembly: GCF_000169035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Collinsella aerofaciens ATCC 25986
  ORGANISM  Collinsella aerofaciens ATCC 25986
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Coriobacteriales; Coriobacteriaceae; Collinsella.
REFERENCE   1  (bases 1 to 2439869)
  AUTHORS   Sudarsanam,P., Ley,R., Guruge,J., Turnbaugh,P.J., Mahowald,M.,
            Liep,D. and Gordon,J.
  TITLE     Draft genome sequence of Collinsella aerofaciens (ATCC 25986)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2439869)
  AUTHORS   Fulton,L., Clifton,S., Fulton,B., Xu,J., Minx,P., Mardis,E.R. and
            Wilson,R.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-APR-2007) Genome Sequencing Center, Washington
            University School of Medicine, 4444 Forest Park, St. Louis, MO
            63108, USA
REFERENCE   3  (bases 1 to 2439869)
  AUTHORS   Fulton,L., Clifton,S., Fulton,B., Xu,J., Minx,P., Mardis,E.R. and
            Wilson,R.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-DEC-2006) Genome Sequencing Center, Washington
            University School of Medicine, 4444 Forest Park, St. Louis, MO
            63108, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AAVN00000000.2.
            
            On May 9, 2007 this sequence version replaced gi:139440426.
            The Collinsella aerofaciens ATCC 25986 whole genome shotgun (WGS)
            project has the project accession NZ_AAVN00000000.  This version of
            the project (02) has the accession number NZ_AAVN02000000, and
            consists of sequences AAVN02000001-AAVN02000025.
            Collinsella aerofaciens (GenBank Accession Number for 16S rRNA
            gene: AB011816) is a member of the division Actinobacteria. In one
            comprehensive 16S rDNA sequence-based enumeration of the colonic
            microbiota of three healthy adult humans, it represents, on
            average, 0.11% of all 16S rDNA sequences and 59.155% of the
            sequences in its division (Eckburg et. al. (2005)). The sequenced
            strain was obtained from ATCC (ATCC 25986)  and is part of a
            sequence-based survey of members of the normal human gut
            microbiota. A joint effort of the WU-GSC and the Center for Genome
            Sciences at Washington University School of Medicine, the purpose
            of this survey is to provide the general scientific community with
            a broad view of the gene content of 100 representatives of the
            major divisions represented in the intestine's microbial community.
            This information should provide a frame of reference for analyzing
            metagenomic studies of the human gut microbiome. Further details of
            this effort are described in a white paper entitled ''Extending Our
            View of Self: the Human Gut Microbiome Initiative (HGMI)''
            (http://www.genome.gov/Pages/Research/Sequencing/SeqProposals/HGMIS
            eq.pdf). These studies are supported by National Human Genome
            Research Institute.
            Sequencing/Assembly: The genomic DNA was purified from liquid
            culture derived from a single bacterial colony. A hybrid sequencing
            strategy that utilized reads from both 454 GS-20 and ABI 3730xl
            sequencers was devised and implemented to generate the draft genome
            sequences. At least 15X sequence coverage of 454 reads and at least
            4X sequence coverage of 3730 reads were collected. 454 reads were
            assembled using Newbler (454 Life Sciences) into 454 de novo
            contigs. These de novo contigs were converted in silico to 800 base
            paired reads ('superreads') with 400 base overlaps with neighboring
            superreads. Finally, PCAP (Huang, et al, Genome Research, 13:2164,
            (2003))was used to assemble the super-reads and the conventional
            3730xl capillary reads.
            This assembly version is a manually improved assembly. The
            specifications for sequence improvement are similar to those of
            comparative-grade finished sequence with the exception of providing
            order and orientation between contigs.
            The major specifications for manually improved sequence  are
            1) detectable, major artifacts resulting from the sequence-assembly
            process (e.g., misassemblies) must be resolved;
            2) suspect, incorrect consensus sequence is manually edited, and
            irrelevant sequence at ends of contigs trimmed.
            3) Joins between contigs, if found, are manually completed.
            4) Order and orientations between contigs are provided if possible.
            
            Coding sequences were predicted using GeneMark v3.3 and Glimmer2
            v2.13. Intergenic regions not spanned by GeneMark and Glimmer2 were
            blasted against NCBI's non-redundant (NR) database and predictions
            generated based on protein alignments. RNA genes were determined
            using tRNAscan-SE 1.23 or Rfam v0.1. Gene names are generated at
            the contig level and may not necessarily reflect any known order or
            orientation between contigs.
            Annotation was added to the contigs in March 2007.
            
            This is a reference genome for the Human Microbiome Project. This
            project is co-owned with the Human Microbiome Project DACC.
            Product names were updated in August 2012.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000169035.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:26:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,206
            CDSs (total)                      :: 2,134
            Genes (coding)                    :: 2,101
            CDSs (with protein)               :: 2,101
            Genes (RNA)                       :: 72
            rRNAs                             :: 5, 7, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 4, 4 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 12 of 33
            Pseudo Genes (incomplete)         :: 23 of 33
            Pseudo Genes (internal stop)      :: 0 of 33
            Pseudo Genes (multiple problems)  :: 2 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2439869
                     /organism="Collinsella aerofaciens ATCC 25986"
                     /mol_type="genomic DNA"
                     /strain="ATCC 25986"
                     /isolation_source="biological product [ENVO:02000043]"
                     /host="Homo sapiens"
                     /type_material="type strain of Collinsella aerofaciens"
                     /db_xref="ATCC:25986"
                     /db_xref="taxon:411903"
WGS         AAVN02000001-AAVN02000025
WGS_SCAFLD  NZ_AAVN02000001-NZ_AAVN02000025
//
LOCUS       NZ_ASPQ01000000      4491619 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Clostridium butyricum CWBI1009, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ASPQ00000000
VERSION     NZ_ASPQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02143030
            Assembly: GCF_000949905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium butyricum CWBI1009
  ORGANISM  Clostridium butyricum CWBI1009
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (bases 1 to 4491619)
  AUTHORS   Calusinska,M., Hamilton,C., Monsieurs,P., Mathy,G., Leys,N.,
            Franck,F., Joris,B., Thonart,P., Hiligsmann,S. and Wilmotte,A.
  TITLE     Genome-wide transcriptional analysis suggests hydrogenase- and
            nitrogenase-mediated hydrogen production in Clostridium butyricum
            CWBI 1009
  JOURNAL   Biotechnol Biofuels 8, 27 (2015)
   PUBMED   25722742
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4491619)
  AUTHORS   Calusinska,M., Monsieurs,P., Hamilton,C., Mathy,G., Leys,N.,
            Franck,F., Joris,B., Thonart,P. and Wilmotte,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAY-2013) Institute for Environment, Health & Safety,
            Belgian Nuclear Research Center (SCK-CEN), Boeretang 200, Mol,
            Antwerp 2400, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ASPQ00000000.1.
            The Clostridium butyricum CWBI1009 whole genome shotgun (WGS)
            project has the project accession NZ_ASPQ00000000.  This version of
            the project (01) has the accession number NZ_ASPQ01000000, and
            consists of sequences ASPQ01000001-ASPQ01000340.
            Bacteria and source DNA available from: Annick Wilmotte, Centre for
            Protein Engineering - Institute of Chemistry Sart Tilman B6,
            University of Liege,  B-4000 Liege, Belgium.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.08
            Assembly Name          :: CWBI1009_v1
            Expected Final Version :: No
            Genome Coverage        :: 113.0x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000949905.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,086
            CDSs (total)                      :: 4,071
            Genes (coding)                    :: 4,014
            CDSs (with protein)               :: 4,014
            Genes (RNA)                       :: 15
            rRNAs                             :: 1, 2 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 9 of 57
            Pseudo Genes (incomplete)         :: 45 of 57
            Pseudo Genes (internal stop)      :: 9 of 57
            Pseudo Genes (multiple problems)  :: 5 of 57
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4491619
                     /organism="Clostridium butyricum CWBI1009"
                     /mol_type="genomic DNA"
                     /strain="CWBI1009"
                     /isolation_source="anaerobic sludge"
                     /db_xref="taxon:1321950"
WGS         ASPQ01000001-ASPQ01000340
WGS_SCAFLD  NZ_ASPQ01000001-NZ_ASPQ01000340
//
LOCUS       NZ_FNRU01000000      2568936 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium coyleae strain DSM 44184, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNRU00000000
VERSION     NZ_FNRU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04488531
            Assembly: GCF_900105505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium coyleae
  ORGANISM  Corynebacterium coyleae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNRU00000000.1.
            The Corynebacterium coyleae whole genome shotgun (WGS) project has
            the project accession NZ_FNRU00000000.  This version of the project
            (01) has the accession number NZ_FNRU01000000, and consists of
            sequences FNRU01000001-FNRU01000002.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900105505.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:59:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,471
            CDSs (total)                      :: 2,405
            Genes (coding)                    :: 2,365
            CDSs (with protein)               :: 2,365
            Genes (RNA)                       :: 66
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 40
            CDSs (without protein)            :: 40
            Pseudo Genes (ambiguous residues) :: 0 of 40
            Pseudo Genes (frameshifted)       :: 14 of 40
            Pseudo Genes (incomplete)         :: 25 of 40
            Pseudo Genes (internal stop)      :: 8 of 40
            Pseudo Genes (multiple problems)  :: 7 of 40
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2568936
                     /organism="Corynebacterium coyleae"
                     /mol_type="genomic DNA"
                     /strain="DSM 44184"
                     /type_material="type strain of Corynebacterium coyleae"
                     /db_xref="taxon:53374"
WGS         FNRU01000001-FNRU01000002
WGS_SCAFLD  NZ_FNRU01000001-NZ_FNRU01000002
//
LOCUS       NZ_MIOG01000000      2442632 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae strain ST378-KZN-2015-45464, whole
            genome shotgun sequencing project.
ACCESSION   NZ_MIOG00000000
VERSION     NZ_MIOG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05729423
            Assembly: GCF_001875925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae
  ORGANISM  Corynebacterium diphtheriae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2442632)
  AUTHORS   du Plessis,M., Wolter,N., Allam,M., de Gouveia,L., Moosa,F.,
            Ntshoe,G., Blumberg,L., Cohen,C., Smith,M., Mutevedzi,P.,
            Thomas,J., Horne,V., Moodley,P., Archary,M., Mahabeer,Y.,
            Mahomed,S., Kuhn,W., Mlisana,K., McCarthy,K. and von Gottberg,A.
  TITLE     Molecular Characterization of Corynebacterium diphtheriae Outbreak
            Isolates, South Africa, March-June 2015
  JOURNAL   Emerg Infect Dis 23 (8), 1308-1315 (2017)
   PUBMED   28726616
REFERENCE   2  (bases 1 to 2442632)
  AUTHORS   Allam,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-SEP-2016) Sequencing Core Facility, National
            Institute for Communicable Diseases, 1 Modderfontein Road,
            Johannesburg, Gauteng 2131, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MIOG00000000.1.
            The Corynebacterium diphtheriae whole genome shotgun (WGS) project
            has the project accession NZ_MIOG00000000.  This version of the
            project (01) has the accession number NZ_MIOG01000000, and consists
            of sequences MIOG01000001-MIOG01000064.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001875925.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:27:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,392
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,259
            CDSs (with protein)               :: 2,259
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 48 of 76
            Pseudo Genes (incomplete)         :: 45 of 76
            Pseudo Genes (internal stop)      :: 10 of 76
            Pseudo Genes (multiple problems)  :: 24 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2442632
                     /organism="Corynebacterium diphtheriae"
                     /mol_type="genomic DNA"
                     /strain="ST378-KZN-2015-45464"
                     /isolation_source="throat swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:1717"
                     /geo_loc_name="South Africa: KwaZulu-Natal"
                     /lat_lon="28.5306 S 30.8958 E"
                     /collection_date="2015"
                     /collected_by="National Institute for Communicable
                     Diseases, South Africa"
                     /note="sequence type 378"
WGS         MIOG01000001-MIOG01000064
WGS_SCAFLD  NZ_MIOG01000001-NZ_MIOG01000064
//
LOCUS       NZ_MINZ01000000      2437672 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae strain ST378-KZN-2015-45790, whole
            genome shotgun sequencing project.
ACCESSION   NZ_MINZ00000000
VERSION     NZ_MINZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05729415
            Assembly: GCF_001875855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae
  ORGANISM  Corynebacterium diphtheriae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2437672)
  AUTHORS   du Plessis,M., Wolter,N., Allam,M., de Gouveia,L., Moosa,F.,
            Ntshoe,G., Blumberg,L., Cohen,C., Smith,M., Mutevedzi,P.,
            Thomas,J., Horne,V., Moodley,P., Archary,M., Mahabeer,Y.,
            Mahomed,S., Kuhn,W., Mlisana,K., McCarthy,K. and von Gottberg,A.
  TITLE     Molecular Characterization of Corynebacterium diphtheriae Outbreak
            Isolates, South Africa, March-June 2015
  JOURNAL   Emerg Infect Dis 23 (8), 1308-1315 (2017)
   PUBMED   28726616
REFERENCE   2  (bases 1 to 2437672)
  AUTHORS   Allam,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-SEP-2016) Sequencing Core Facility, National
            Institute for Communicable Diseases, 1 Modderfontein Road,
            Johannesburg, Gauteng 2131, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MINZ00000000.1.
            The Corynebacterium diphtheriae whole genome shotgun (WGS) project
            has the project accession NZ_MINZ00000000.  This version of the
            project (01) has the accession number NZ_MINZ01000000, and consists
            of sequences MINZ01000001-MINZ01000060.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001875855.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:22:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,387
            CDSs (total)                      :: 2,329
            Genes (coding)                    :: 2,253
            CDSs (with protein)               :: 2,253
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 46 of 76
            Pseudo Genes (incomplete)         :: 45 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 23 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2437672
                     /organism="Corynebacterium diphtheriae"
                     /mol_type="genomic DNA"
                     /strain="ST378-KZN-2015-45790"
                     /isolation_source="Throat and nasal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:1717"
                     /geo_loc_name="South Africa: KwaZulu-Natal"
                     /lat_lon="28.5306 S 30.8958 E"
                     /collection_date="2015"
                     /collected_by="National Institute for Communicable
                     Diseases, South Africa"
                     /note="sequence type 378"
WGS         MINZ01000001-MINZ01000060
WGS_SCAFLD  NZ_MINZ01000001-NZ_MINZ01000060
//
LOCUS       NZ_MINY01000000      2439097 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae strain ST378-KZN-2015-45789, whole
            genome shotgun sequencing project.
ACCESSION   NZ_MINY00000000
VERSION     NZ_MINY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05729414
            Assembly: GCF_001875815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae
  ORGANISM  Corynebacterium diphtheriae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2439097)
  AUTHORS   du Plessis,M., Wolter,N., Allam,M., de Gouveia,L., Moosa,F.,
            Ntshoe,G., Blumberg,L., Cohen,C., Smith,M., Mutevedzi,P.,
            Thomas,J., Horne,V., Moodley,P., Archary,M., Mahabeer,Y.,
            Mahomed,S., Kuhn,W., Mlisana,K., McCarthy,K. and von Gottberg,A.
  TITLE     Molecular Characterization of Corynebacterium diphtheriae Outbreak
            Isolates, South Africa, March-June 2015
  JOURNAL   Emerg Infect Dis 23 (8), 1308-1315 (2017)
   PUBMED   28726616
REFERENCE   2  (bases 1 to 2439097)
  AUTHORS   Allam,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-SEP-2016) Sequencing Core Facility, National
            Institute for Communicable Diseases, 1 Modderfontein Road,
            Johannesburg, Gauteng 2131, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MINY00000000.1.
            The Corynebacterium diphtheriae whole genome shotgun (WGS) project
            has the project accession NZ_MINY00000000.  This version of the
            project (01) has the accession number NZ_MINY01000000, and consists
            of sequences MINY01000001-MINY01000061.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001875815.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:19:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,385
            CDSs (total)                      :: 2,323
            Genes (coding)                    :: 2,249
            CDSs (with protein)               :: 2,249
            Genes (RNA)                       :: 62
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 45 of 74
            Pseudo Genes (incomplete)         :: 43 of 74
            Pseudo Genes (internal stop)      :: 12 of 74
            Pseudo Genes (multiple problems)  :: 22 of 74
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2439097
                     /organism="Corynebacterium diphtheriae"
                     /mol_type="genomic DNA"
                     /strain="ST378-KZN-2015-45789"
                     /isolation_source="Throat and nasal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:1717"
                     /geo_loc_name="South Africa: KwaZulu-Natal"
                     /lat_lon="28.5306 S 30.8958 E"
                     /collection_date="2015"
                     /collected_by="National Institute for Communicable
                     Diseases, South Africa"
                     /note="sequence type 378"
WGS         MINY01000001-MINY01000061
WGS_SCAFLD  NZ_MINY01000001-NZ_MINY01000061
//
LOCUS       NZ_MINX01000000      2435796 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae strain ST378-KZN-2015-45461, whole
            genome shotgun sequencing project.
ACCESSION   NZ_MINX00000000
VERSION     NZ_MINX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05729411
            Assembly: GCF_001875845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae
  ORGANISM  Corynebacterium diphtheriae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2435796)
  AUTHORS   du Plessis,M., Wolter,N., Allam,M., de Gouveia,L., Moosa,F.,
            Ntshoe,G., Blumberg,L., Cohen,C., Smith,M., Mutevedzi,P.,
            Thomas,J., Horne,V., Moodley,P., Archary,M., Mahabeer,Y.,
            Mahomed,S., Kuhn,W., Mlisana,K., McCarthy,K. and von Gottberg,A.
  TITLE     Molecular Characterization of Corynebacterium diphtheriae Outbreak
            Isolates, South Africa, March-June 2015
  JOURNAL   Emerg Infect Dis 23 (8), 1308-1315 (2017)
   PUBMED   28726616
REFERENCE   2  (bases 1 to 2435796)
  AUTHORS   Allam,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-SEP-2016) Sequencing Core Facility, National
            Institute for Communicable Diseases, 1 Modderfontein Road,
            Johannesburg, Gauteng 2131, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MINX00000000.1.
            The Corynebacterium diphtheriae whole genome shotgun (WGS) project
            has the project accession NZ_MINX00000000.  This version of the
            project (01) has the accession number NZ_MINX01000000, and consists
            of sequences MINX01000001-MINX01000054.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001875845.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:27:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,384
            CDSs (total)                      :: 2,326
            Genes (coding)                    :: 2,249
            CDSs (with protein)               :: 2,249
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 48 of 77
            Pseudo Genes (incomplete)         :: 46 of 77
            Pseudo Genes (internal stop)      :: 11 of 77
            Pseudo Genes (multiple problems)  :: 23 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435796
                     /organism="Corynebacterium diphtheriae"
                     /mol_type="genomic DNA"
                     /strain="ST378-KZN-2015-45461"
                     /isolation_source="throat swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:1717"
                     /geo_loc_name="South Africa: KwaZulu-Natal"
                     /lat_lon="28.5306 S 30.8958 E"
                     /collection_date="2015"
                     /collected_by="National Institute for Communicable
                     Diseases, South Africa"
                     /note="sequence type 378"
WGS         MINX01000001-MINX01000054
WGS_SCAFLD  NZ_MINX01000001-NZ_MINX01000054
//
LOCUS       NZ_MIOJ01000000      2437866 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae strain ST378-KZN-2015-45786, whole
            genome shotgun sequencing project.
ACCESSION   NZ_MIOJ00000000
VERSION     NZ_MIOJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05729413
            Assembly: GCF_001875965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae
  ORGANISM  Corynebacterium diphtheriae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2437866)
  AUTHORS   du Plessis,M., Wolter,N., Allam,M., de Gouveia,L., Moosa,F.,
            Ntshoe,G., Blumberg,L., Cohen,C., Smith,M., Mutevedzi,P.,
            Thomas,J., Horne,V., Moodley,P., Archary,M., Mahabeer,Y.,
            Mahomed,S., Kuhn,W., Mlisana,K., McCarthy,K. and von Gottberg,A.
  TITLE     Molecular Characterization of Corynebacterium diphtheriae Outbreak
            Isolates, South Africa, March-June 2015
  JOURNAL   Emerg Infect Dis 23 (8), 1308-1315 (2017)
   PUBMED   28726616
REFERENCE   2  (bases 1 to 2437866)
  AUTHORS   Allam,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-SEP-2016) Sequencing Core Facility, National
            Institute for Communicable Diseases, 1 Modderfontein Road,
            Johannesburg, Gauteng 2131, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MIOJ00000000.1.
            The Corynebacterium diphtheriae whole genome shotgun (WGS) project
            has the project accession NZ_MIOJ00000000.  This version of the
            project (01) has the accession number NZ_MIOJ01000000, and consists
            of sequences MIOJ01000001-MIOJ01000062.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001875965.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:25:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,386
            CDSs (total)                      :: 2,332
            Genes (coding)                    :: 2,256
            CDSs (with protein)               :: 2,256
            Genes (RNA)                       :: 54
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 49 of 76
            Pseudo Genes (incomplete)         :: 44 of 76
            Pseudo Genes (internal stop)      :: 11 of 76
            Pseudo Genes (multiple problems)  :: 25 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2437866
                     /organism="Corynebacterium diphtheriae"
                     /mol_type="genomic DNA"
                     /strain="ST378-KZN-2015-45786"
                     /isolation_source="Throat and nasal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:1717"
                     /geo_loc_name="South Africa: KwaZulu-Natal"
                     /lat_lon="28.5306 S 30.8958 E"
                     /collection_date="2015"
                     /collected_by="National Institute for Communicable
                     Diseases, South Africa"
                     /note="sequence type 378"
WGS         MIOJ01000001-MIOJ01000062
WGS_SCAFLD  NZ_MIOJ01000001-NZ_MIOJ01000062
//
LOCUS       NZ_NDHP01000000      2436284 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae strain rz553, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NDHP00000000
VERSION     NZ_NDHP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06311215
            Assembly: GCF_002115325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae
  ORGANISM  Corynebacterium diphtheriae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2436284)
  AUTHORS   Ahmad,N., Mohd Khalid,M.K.N., Hashim,R., Yi Fen,S.H., Liow,Y.L.,
            Abd Wahab,M.A., Hamzah,H., Dahalan,N.A. and Seradja,V.
  TITLE     Draft genomes of Corynebacterium diphtheriae strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2436284)
  AUTHORS   Ahmad,N., Mohd Khalid,M.K.N., Hashim,R., Yi Fen,S.H., Liow,Y.L.,
            Abd Wahab,M.A., Hamzah,H., Dahalan,N.A. and Seradja,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-APR-2017) Bacteriology Unit, Institute for Medical
            Research, Jalan Pahang, Kuala Lumpur 50588, Malaysia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NDHP00000000.1.
            The Corynebacterium diphtheriae whole genome shotgun (WGS) project
            has the project accession NZ_NDHP00000000.  This version of the
            project (01) has the accession number NZ_NDHP01000000, and consists
            of sequences NDHP01000001-NDHP01000035.
            Bacteria available from Dr Norazah Ahmad, Bacteriology Unit,
            Institute for Medical Research, Jalan Pahang, 50588 Kuala Lumpur.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-DEC-2016
            Assembly Method        :: SPAdes v. 3.9.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 468x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002115325.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:28:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,357
            CDSs (total)                      :: 2,297
            Genes (coding)                    :: 2,216
            CDSs (with protein)               :: 2,216
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 42 of 81
            Pseudo Genes (incomplete)         :: 53 of 81
            Pseudo Genes (internal stop)      :: 22 of 81
            Pseudo Genes (multiple problems)  :: 30 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2436284
                     /organism="Corynebacterium diphtheriae"
                     /mol_type="genomic DNA"
                     /strain="rz553"
                     /isolation_source="throat swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:1717"
                     /geo_loc_name="Malaysia: Alor Setar"
                     /lat_lon="6.1248 N 100.368 E"
                     /collection_date="2016-08-10"
                     /collected_by="Institute for Medical Research (IMR)"
WGS         NDHP01000001-NDHP01000035
WGS_SCAFLD  NZ_NDHP01000001-NZ_NDHP01000035
//
LOCUS       NZ_MIOK01000000      2439975 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae strain ST378-KZN-2015-45785, whole
            genome shotgun sequencing project.
ACCESSION   NZ_MIOK00000000
VERSION     NZ_MIOK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05729426
            Assembly: GCF_001875975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae
  ORGANISM  Corynebacterium diphtheriae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2439975)
  AUTHORS   du Plessis,M., Wolter,N., Allam,M., de Gouveia,L., Moosa,F.,
            Ntshoe,G., Blumberg,L., Cohen,C., Smith,M., Mutevedzi,P.,
            Thomas,J., Horne,V., Moodley,P., Archary,M., Mahabeer,Y.,
            Mahomed,S., Kuhn,W., Mlisana,K., McCarthy,K. and von Gottberg,A.
  TITLE     Molecular Characterization of Corynebacterium diphtheriae Outbreak
            Isolates, South Africa, March-June 2015
  JOURNAL   Emerg Infect Dis 23 (8), 1308-1315 (2017)
   PUBMED   28726616
REFERENCE   2  (bases 1 to 2439975)
  AUTHORS   Allam,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-SEP-2016) Sequencing Core Facility, National
            Institute for Communicable Diseases, 1 Modderfontein Road,
            Johannesburg, Gauteng 2131, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MIOK00000000.1.
            The Corynebacterium diphtheriae whole genome shotgun (WGS) project
            has the project accession NZ_MIOK00000000.  This version of the
            project (01) has the accession number NZ_MIOK01000000, and consists
            of sequences MIOK01000001-MIOK01000070.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001875975.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:24:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,381
            CDSs (total)                      :: 2,321
            Genes (coding)                    :: 2,246
            CDSs (with protein)               :: 2,246
            Genes (RNA)                       :: 60
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 46 of 75
            Pseudo Genes (incomplete)         :: 43 of 75
            Pseudo Genes (internal stop)      :: 11 of 75
            Pseudo Genes (multiple problems)  :: 22 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2439975
                     /organism="Corynebacterium diphtheriae"
                     /mol_type="genomic DNA"
                     /strain="ST378-KZN-2015-45785"
                     /isolation_source="Throat and nasal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:1717"
                     /geo_loc_name="South Africa: KwaZulu-Natal"
                     /lat_lon="28.5306 S 30.8958 E"
                     /collection_date="2015"
                     /collected_by="National Institute for Communicable
                     Diseases, South Africa"
                     /note="sequence type 378"
WGS         MIOK01000001-MIOK01000070
WGS_SCAFLD  NZ_MIOK01000001-NZ_MIOK01000070
//
LOCUS       NZ_NDHL01000000      2406427 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae strain rz656, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NDHL00000000
VERSION     NZ_NDHL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06311219
            Assembly: GCF_002115125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae
  ORGANISM  Corynebacterium diphtheriae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2406427)
  AUTHORS   Ahmad,N., Mohd Khalid,M.K.N., Hashim,R., Yi Fen,S.H., Liow,Y.L.,
            Abd Wahab,M.A., Hamzah,H., Dahalan,N.A. and Seradja,V.
  TITLE     Draft genomes of Corynebacterium diphtheriae strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2406427)
  AUTHORS   Ahmad,N., Mohd Khalid,M.K.N., Hashim,R., Yi Fen,S.H., Liow,Y.L.,
            Abd Wahab,M.A., Hamzah,H., Dahalan,N.A. and Seradja,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-APR-2017) Bacteriology Unit, Institute for Medical
            Research, Jalan Pahang, Kuala Lumpur 50588, Malaysia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NDHL00000000.1.
            The Corynebacterium diphtheriae whole genome shotgun (WGS) project
            has the project accession NZ_NDHL00000000.  This version of the
            project (01) has the accession number NZ_NDHL01000000, and consists
            of sequences NDHL01000001-NDHL01000050.
            Bacteria available from Dr Norazah Ahmad, Bacteriology Unit,
            Institute for Medical Research, Jalan Pahang, 50588 Kuala Lumpur.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-DEC-2016
            Assembly Method        :: SPAdes v. 3.9.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 81x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002115125.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:33:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,315
            CDSs (total)                      :: 2,256
            Genes (coding)                    :: 2,186
            CDSs (with protein)               :: 2,186
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 34 of 70
            Pseudo Genes (incomplete)         :: 41 of 70
            Pseudo Genes (internal stop)      :: 18 of 70
            Pseudo Genes (multiple problems)  :: 20 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2406427
                     /organism="Corynebacterium diphtheriae"
                     /mol_type="genomic DNA"
                     /strain="rz656"
                     /isolation_source="throat swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:1717"
                     /geo_loc_name="Malaysia: Tawau"
                     /lat_lon="4.2447 N 117.891 E"
                     /collection_date="2016-09-19"
                     /collected_by="Institute for Medical Research (IMR)"
WGS         NDHL01000001-NDHL01000050
WGS_SCAFLD  NZ_NDHL01000001-NZ_NDHL01000050
//
LOCUS       NZ_NDHT01000000      2431158 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae strain c113, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NDHT00000000
VERSION     NZ_NDHT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06311209
            Assembly: GCF_002115335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae
  ORGANISM  Corynebacterium diphtheriae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2431158)
  AUTHORS   Ahmad,N., Mohd Khalid,M.K.N., Hashim,R., Yi Fen,S.H., Liow,Y.L.,
            Abd Wahab,M.A., Hamzah,H., Dahalan,N.A. and Seradja,V.
  TITLE     Draft genomes of Corynebacterium diphtheriae strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2431158)
  AUTHORS   Ahmad,N., Mohd Khalid,M.K.N., Hashim,R., Yi Fen,S.H., Liow,Y.L.,
            Abd Wahab,M.A., Hamzah,H., Dahalan,N.A. and Seradja,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-APR-2017) Bacteriology Unit, Institute for Medical
            Research, Jalan Pahang, Kuala Lumpur 50588, Malaysia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NDHT00000000.1.
            The Corynebacterium diphtheriae whole genome shotgun (WGS) project
            has the project accession NZ_NDHT00000000.  This version of the
            project (01) has the accession number NZ_NDHT01000000, and consists
            of sequences NDHT01000001-NDHT01000036.
            Bacteria available from Dr Norazah Ahmad, Bacteriology Unit,
            Institute for Medical Research, Jalan Pahang, 50588 Kuala Lumpur.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-DEC-2016
            Assembly Method        :: SPAdes v. 3.9.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 498x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002115335.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:36:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,350
            CDSs (total)                      :: 2,290
            Genes (coding)                    :: 2,214
            CDSs (with protein)               :: 2,214
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 33 of 76
            Pseudo Genes (incomplete)         :: 51 of 76
            Pseudo Genes (internal stop)      :: 17 of 76
            Pseudo Genes (multiple problems)  :: 23 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2431158
                     /organism="Corynebacterium diphtheriae"
                     /mol_type="genomic DNA"
                     /strain="c113"
                     /host="Homo sapiens"
                     /db_xref="taxon:1717"
                     /collection_date="1986"
                     /collected_by="Institute for Medical Research (IMR)"
WGS         NDHT01000001-NDHT01000036
WGS_SCAFLD  NZ_NDHT01000001-NZ_NDHT01000036
//
LOCUS       NZ_NDHR01000000      2459577 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae strain c324, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NDHR00000000
VERSION     NZ_NDHR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06311212
            Assembly: GCF_002115285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae
  ORGANISM  Corynebacterium diphtheriae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2459577)
  AUTHORS   Ahmad,N., Mohd Khalid,M.K.N., Hashim,R., Yi Fen,S.H., Liow,Y.L.,
            Abd Wahab,M.A., Hamzah,H., Dahalan,N.A. and Seradja,V.
  TITLE     Draft genomes of Corynebacterium diphtheriae strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2459577)
  AUTHORS   Ahmad,N., Mohd Khalid,M.K.N., Hashim,R., Yi Fen,S.H., Liow,Y.L.,
            Abd Wahab,M.A., Hamzah,H., Dahalan,N.A. and Seradja,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-APR-2017) Bacteriology Unit, Institute for Medical
            Research, Jalan Pahang, Kuala Lumpur 50588, Malaysia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NDHR00000000.1.
            The Corynebacterium diphtheriae whole genome shotgun (WGS) project
            has the project accession NZ_NDHR00000000.  This version of the
            project (01) has the accession number NZ_NDHR01000000, and consists
            of sequences NDHR01000001-NDHR01000037.
            Bacteria available from Dr Norazah Ahmad, Bacteriology Unit,
            Institute for Medical Research, Jalan Pahang, 50588 Kuala Lumpur.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-DEC-2016
            Assembly Method        :: SPAdes v. 3.9.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 392x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002115285.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:33:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,376
            CDSs (total)                      :: 2,315
            Genes (coding)                    :: 2,234
            CDSs (with protein)               :: 2,234
            Genes (RNA)                       :: 61
            rRNAs                             :: 1, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 52 of 81
            Pseudo Genes (internal stop)      :: 15 of 81
            Pseudo Genes (multiple problems)  :: 20 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2459577
                     /organism="Corynebacterium diphtheriae"
                     /mol_type="genomic DNA"
                     /strain="c324"
                     /host="Homo sapiens"
                     /db_xref="taxon:1717"
                     /collection_date="2003"
                     /collected_by="Institute for Medical Research (IMR)"
WGS         NDHR01000001-NDHR01000037
WGS_SCAFLD  NZ_NDHR01000001-NZ_NDHR01000037
//
LOCUS       NZ_NBNL01000000      2460012 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae strain c326, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NBNL00000000
VERSION     NZ_NBNL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06311213
            Assembly: GCF_002213075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae
  ORGANISM  Corynebacterium diphtheriae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2460012)
  AUTHORS   Ahmad,N., Mohd Khalid,M.K.N., Hashim,R., Yi Fen,S.H., Liow,Y.L.,
            Abd Wahab,M.A., Hamzah,H., Dahalan,N.A. and Seradja,V.
  TITLE     Draft genomes of Corynebacterium diphtheriae strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2460012)
  AUTHORS   Ahmad,N., Mohd Khalid,M.K.N., Hashim,R., Yi Fen,S.H., Liow,Y.L.,
            Abd Wahab,M.A., Hamzah,H., Dahalan,N.A. and Seradja,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-APR-2017) Bacteriology Unit, Institute for Medical
            Research, Jalan Pahang, Kuala Lumpur 50588, Malaysia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NBNL00000000.1.
            The Corynebacterium diphtheriae whole genome shotgun (WGS) project
            has the project accession NZ_NBNL00000000.  This version of the
            project (01) has the accession number NZ_NBNL01000000, and consists
            of sequences NBNL01000001-NBNL01000035.
            Bacteria available from Dr Norazah Ahmad, Bacteriology Unit,
            Institute for Medical Research, Jalan Pahang, 50588 Kuala Lumpur.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 234x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002213075.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:36:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,373
            CDSs (total)                      :: 2,313
            Genes (coding)                    :: 2,233
            CDSs (with protein)               :: 2,233
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 41 of 80
            Pseudo Genes (incomplete)         :: 49 of 80
            Pseudo Genes (internal stop)      :: 16 of 80
            Pseudo Genes (multiple problems)  :: 21 of 80
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2460012
                     /organism="Corynebacterium diphtheriae"
                     /mol_type="genomic DNA"
                     /strain="c326"
                     /host="Homo sapiens"
                     /db_xref="taxon:1717"
                     /collection_date="2003"
                     /collected_by="Institute for Medical Research (IMR)"
WGS         NBNL01000001-NBNL01000035
WGS_SCAFLD  NZ_NBNL01000001-NZ_NBNL01000035
//
LOCUS       NZ_JAALLV010000000   3396324 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Clostridium perfringens strain CP-44, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAALLV000000000
VERSION     NZ_JAALLV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14178550
            Assembly: GCF_011062475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium perfringens
  ORGANISM  Clostridium perfringens
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (bases 1 to 3396324)
  AUTHORS   Feng,Y. and Hu,Y.
  TITLE     Genomic Insights into the Phylogeny and Genetic Plasticity of the
            Human and Animal Enteric Pathogen Clostridium perfringens
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3396324)
  AUTHORS   Feng,Y. and Hu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-FEB-2020) College of Animal Science and Technology,
            China Agricultural University, No. 2 Yuanmingyuan Xi Road, Beijing
            100193, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAALLV000000000.1.
            The Clostridium perfringens whole genome shotgun (WGS) project has
            the project accession NZ_JAALLV000000000.  This version of the
            project (01) has the accession number NZ_JAALLV010000000, and
            consists of sequences JAALLV010000001-JAALLV010000027.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.6.2
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 300x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_011062475.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:40:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,147
            CDSs (total)                      :: 3,069
            Genes (coding)                    :: 3,043
            CDSs (with protein)               :: 3,043
            Genes (RNA)                       :: 78
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 68
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 1 of 26
            Pseudo Genes (frameshifted)       :: 9 of 26
            Pseudo Genes (incomplete)         :: 17 of 26
            Pseudo Genes (internal stop)      :: 5 of 26
            Pseudo Genes (multiple problems)  :: 5 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3396324
                     /organism="Clostridium perfringens"
                     /mol_type="genomic DNA"
                     /strain="CP-44"
                     /host="sheep"
                     /db_xref="taxon:1502"
                     /geo_loc_name="China"
                     /collection_date="1958"
WGS         JAALLV010000001-JAALLV010000027
WGS_SCAFLD  NZ_JAALLV010000001-NZ_JAALLV010000027
//
LOCUS       NZ_CAJDYY010000000   2453275 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae isolate YEM0043, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CAJDYY000000000
VERSION     NZ_CAJDYY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7052207
            Assembly: GCF_903986545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae
  ORGANISM  Corynebacterium diphtheriae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2453275)
  AUTHORS   Criscuolo,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-JUL-2020) INSTITUT PASTEUR, 25-28 Rue du Dr Roux,
            75015 Paris, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAJDYY000000000.1.
            The Corynebacterium diphtheriae whole genome shotgun (WGS) project
            has the project accession NZ_CAJDYY000000000.  This version of the
            project (01) has the accession number NZ_CAJDYY010000000, and
            consists of sequences CAJDYY010000001-CAJDYY010000035.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_903986545.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:57:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,377
            CDSs (total)                      :: 2,318
            Genes (coding)                    :: 2,244
            CDSs (with protein)               :: 2,244
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 32 of 74
            Pseudo Genes (incomplete)         :: 55 of 74
            Pseudo Genes (internal stop)      :: 12 of 74
            Pseudo Genes (multiple problems)  :: 19 of 74
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2453275
                     /organism="Corynebacterium diphtheriae"
                     /mol_type="genomic DNA"
                     /isolate="YEM0043"
                     /db_xref="taxon:1717"
WGS         CAJDYY010000001-CAJDYY010000035
WGS_SCAFLD  NZ_CAJDYY010000001-NZ_CAJDYY010000035
//
LOCUS       NZ_JAALMH010000000   3396157 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Clostridium perfringens strain CP-32, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAALMH000000000
VERSION     NZ_JAALMH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14178538
            Assembly: GCF_011062735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium perfringens
  ORGANISM  Clostridium perfringens
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (bases 1 to 3396157)
  AUTHORS   Feng,Y. and Hu,Y.
  TITLE     Genomic Insights into the Phylogeny and Genetic Plasticity of the
            Human and Animal Enteric Pathogen Clostridium perfringens
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3396157)
  AUTHORS   Feng,Y. and Hu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-FEB-2020) College of Animal Science and Technology,
            China Agricultural University, No. 2 Yuanmingyuan Xi Road, Beijing
            100193, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAALMH000000000.1.
            The Clostridium perfringens whole genome shotgun (WGS) project has
            the project accession NZ_JAALMH000000000.  This version of the
            project (01) has the accession number NZ_JAALMH010000000, and
            consists of sequences JAALMH010000001-JAALMH010000028.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.6.2
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 300x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_011062735.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:50:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,143
            CDSs (total)                      :: 3,065
            Genes (coding)                    :: 3,039
            CDSs (with protein)               :: 3,039
            Genes (RNA)                       :: 78
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 68
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 1 of 26
            Pseudo Genes (frameshifted)       :: 8 of 26
            Pseudo Genes (incomplete)         :: 17 of 26
            Pseudo Genes (internal stop)      :: 5 of 26
            Pseudo Genes (multiple problems)  :: 4 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3396157
                     /organism="Clostridium perfringens"
                     /mol_type="genomic DNA"
                     /strain="CP-32"
                     /host="sheep"
                     /db_xref="taxon:1502"
                     /geo_loc_name="China"
                     /collection_date="1983"
WGS         JAALMH010000001-JAALMH010000028
WGS_SCAFLD  NZ_JAALMH010000001-NZ_JAALMH010000028
//
LOCUS       NZ_CAJDYJ010000000   2472351 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae isolate YEM0051, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CAJDYJ000000000
VERSION     NZ_CAJDYJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7052196
            Assembly: GCF_903986305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae
  ORGANISM  Corynebacterium diphtheriae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2472351)
  AUTHORS   Criscuolo,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-JUL-2020) INSTITUT PASTEUR, 25-28 Rue du Dr Roux,
            75015 Paris, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAJDYJ000000000.1.
            The Corynebacterium diphtheriae whole genome shotgun (WGS) project
            has the project accession NZ_CAJDYJ000000000.  This version of the
            project (01) has the accession number NZ_CAJDYJ010000000, and
            consists of sequences CAJDYJ010000001-CAJDYJ010000038.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_903986305.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:58:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,371
            CDSs (total)                      :: 2,312
            Genes (coding)                    :: 2,236
            CDSs (with protein)               :: 2,236
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 41 of 76
            Pseudo Genes (incomplete)         :: 45 of 76
            Pseudo Genes (internal stop)      :: 16 of 76
            Pseudo Genes (multiple problems)  :: 23 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2472351
                     /organism="Corynebacterium diphtheriae"
                     /mol_type="genomic DNA"
                     /isolate="YEM0051"
                     /db_xref="taxon:1717"
WGS         CAJDYJ010000001-CAJDYJ010000038
WGS_SCAFLD  NZ_CAJDYJ010000001-NZ_CAJDYJ010000038
//
LOCUS       NZ_CAJDYU010000000   2436474 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae isolate YEM0046, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CAJDYU000000000
VERSION     NZ_CAJDYU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7052204
            Assembly: GCF_903986485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae
  ORGANISM  Corynebacterium diphtheriae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2436474)
  AUTHORS   Criscuolo,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-JUL-2020) INSTITUT PASTEUR, 25-28 Rue du Dr Roux,
            75015 Paris, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAJDYU000000000.1.
            The Corynebacterium diphtheriae whole genome shotgun (WGS) project
            has the project accession NZ_CAJDYU000000000.  This version of the
            project (01) has the accession number NZ_CAJDYU010000000, and
            consists of sequences CAJDYU010000001-CAJDYU010000047.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_903986485.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:00:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,357
            CDSs (total)                      :: 2,297
            Genes (coding)                    :: 2,222
            CDSs (with protein)               :: 2,222
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 37 of 75
            Pseudo Genes (incomplete)         :: 49 of 75
            Pseudo Genes (internal stop)      :: 12 of 75
            Pseudo Genes (multiple problems)  :: 19 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2436474
                     /organism="Corynebacterium diphtheriae"
                     /mol_type="genomic DNA"
                     /isolate="YEM0046"
                     /db_xref="taxon:1717"
WGS         CAJDYU010000001-CAJDYU010000047
WGS_SCAFLD  NZ_CAJDYU010000001-NZ_CAJDYU010000047
//
LOCUS       NZ_LLVZ01000000      1286787 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Candidatus Liberibacter solanacearum strain RSTM, whole genome
            shotgun sequencing project.
ACCESSION   NZ_LLVZ00000000
VERSION     NZ_LLVZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04169026
            Assembly: GCF_001414235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Candidatus Liberibacter solanacearum
  ORGANISM  Candidatus Liberibacter solanacearum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Liberibacter.
REFERENCE   1  (bases 1 to 1286787)
  AUTHORS   Wu,F., Deng,X., Liang,G., Wallis,C., Trumble,J.T., Prager,S. and
            Chen,J.
  TITLE     De Novo Genome Sequence of 'Candidatus Liberibacter solanacearum'
            from a Single Potato Psyllid in California
  JOURNAL   Genome Announc 3 (6), e01500-15 (2015)
   PUBMED   26679599
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1286787)
  AUTHORS   Wu,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-OCT-2015) USDA-ARS, San Joaquin Valley Agricultural
            Sciences Center, 9611 South Riverbend Avenue, Parlier, CA 93648,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LLVZ00000000.1.
            The Candidatus Liberibacter solanacearum whole genome shotgun (WGS)
            project has the project accession NZ_LLVZ00000000.  This version of
            the project (01) has the accession number NZ_LLVZ01000000, and
            consists of sequences LLVZ01000001-LLVZ01000026.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 2015
            Assembly Method       :: CLC NGS Cell v. 7.5
            Genome Coverage       :: 1543.0x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001414235.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:35:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,212
            CDSs (total)                      :: 1,166
            Genes (coding)                    :: 1,144
            CDSs (with protein)               :: 1,144
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 7 of 22
            Pseudo Genes (incomplete)         :: 16 of 22
            Pseudo Genes (internal stop)      :: 3 of 22
            Pseudo Genes (multiple problems)  :: 4 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286787
                     /organism="Candidatus Liberibacter solanacearum"
                     /mol_type="genomic DNA"
                     /strain="RSTM"
                     /host="Bactericera cockerelli"
                     /db_xref="taxon:556287"
                     /geo_loc_name="USA: California"
                     /collection_date="2015-07-20"
WGS         LLVZ01000001-LLVZ01000026
WGS_SCAFLD  NZ_LLVZ01000001-NZ_LLVZ01000026
//
LOCUS       NZ_JADNHM010000000   3338372 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Clostridium perfringens strain BSD2780120875b_170604_NULL, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JADNHM000000000
VERSION     NZ_JADNHM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15532659
            Assembly: GCF_015553915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium perfringens
  ORGANISM  Clostridium perfringens
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (bases 1 to 3338372)
  AUTHORS   Aggarwala,V. and Faith,J.
  TITLE     Quantification of discrete gut bacterial strains following fecal
            transplantation for recurrent Clostridioides difficile infection
            demonstrates long-term stable engraftment in non-relapsing
            recipients
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3338372)
  AUTHORS   Aggarwala,V. and Faith,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2020) Genetics and Genomic Sciences, Icahn School
            of Medicine at Mount Sinai, 1470 Madison Ave, New York, NY 10029,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADNHM000000000.1.
            The Clostridium perfringens whole genome shotgun (WGS) project has
            the project accession NZ_JADNHM000000000.  This version of the
            project (01) has the accession number NZ_JADNHM010000000, and
            consists of sequences JADNHM010000001-JADNHM010000024.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35.62x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_015553915.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:59:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,065
            CDSs (total)                      :: 2,975
            Genes (coding)                    :: 2,951
            CDSs (with protein)               :: 2,951
            Genes (RNA)                       :: 90
            rRNAs                             :: 9, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 6 of 24
            Pseudo Genes (incomplete)         :: 17 of 24
            Pseudo Genes (internal stop)      :: 4 of 24
            Pseudo Genes (multiple problems)  :: 3 of 24
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3338372
                     /organism="Clostridium perfringens"
                     /mol_type="genomic DNA"
                     /strain="BSD2780120875b_170604_NULL"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:1502"
                     /geo_loc_name="USA"
                     /collection_date="2017-06-04"
WGS         JADNHM010000001-JADNHM010000024
WGS_SCAFLD  NZ_JADNHM010000001-NZ_JADNHM010000024
//
LOCUS       NZ_LIIM01000000      1233647 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Candidatus Liberibacter asiaticus strain YCPsy, whole genome
            shotgun sequencing project.
ACCESSION   NZ_LIIM00000000
VERSION     NZ_LIIM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03983876
            Assembly: GCF_001296945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Candidatus Liberibacter asiaticus
  ORGANISM  Candidatus Liberibacter asiaticus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Liberibacter.
REFERENCE   1  (bases 1 to 1233647)
  AUTHORS   Wu,F., Zheng,Z., Deng,X., Cen,Y., Liang,G. and Chen,J.
  TITLE     Draft Genome Sequence of 'Candidatus Liberibacter asiaticus' from
            Diaphorina citri in Guangdong, China
  JOURNAL   Genome Announc 3 (6), e01316-15 (2015)
   PUBMED   26543132
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1233647)
  AUTHORS   Wu,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-AUG-2015) San Joaquin Valley Agricultural Sciences
            Center, USDA-ARS, 9611 South Riverbend Avenue, Parlier, CA 93648,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LIIM00000000.1.
            The Candidatus Liberibacter asiaticus whole genome shotgun (WGS)
            project has the project accession NZ_LIIM00000000.  This version of
            the project (01) has the accession number NZ_LIIM01000000, and
            consists of sequences LIIM01000001-LIIM01000009.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method           :: bowtie2 v. 2.2.6; Velvet v. 1.2.10
            Reference-guided Assembly :: GCA_000023765.2
            Genome Coverage           :: 1120.0x
            Sequencing Technology     :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001296945.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:39:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,121
            CDSs (total)                      :: 1,065
            Genes (coding)                    :: 1,037
            CDSs (with protein)               :: 1,037
            Genes (RNA)                       :: 56
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 12 of 28
            Pseudo Genes (incomplete)         :: 15 of 28
            Pseudo Genes (internal stop)      :: 8 of 28
            Pseudo Genes (multiple problems)  :: 6 of 28
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1233647
                     /organism="Candidatus Liberibacter asiaticus"
                     /mol_type="genomic DNA"
                     /strain="YCPsy"
                     /host="Diaphorina citri"
                     /db_xref="taxon:34021"
                     /geo_loc_name="China: Guangdong"
                     /collection_date="2015-03-17"
WGS         LIIM01000001-LIIM01000009
WGS_SCAFLD  NZ_LIIM01000001-NZ_LIIM01000009
//
LOCUS       NZ_WQPL01000000      2126396 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Collinsella aerofaciens strain MCC356, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WQPL00000000
VERSION     NZ_WQPL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12147381
            Assembly: GCF_018785245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Collinsella aerofaciens
  ORGANISM  Collinsella aerofaciens
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Coriobacteriales; Coriobacteriaceae; Collinsella.
REFERENCE   1  (bases 1 to 2126396)
  AUTHORS   Perez,M., Ntemiri,A., Tan,H., Harris,H.M.B., Roager,H.M.,
            Ribiere,C. and O'Toole,P.W.
  TITLE     A synthetic consortium of 100 gut commensals modulates the
            composition and function in a colon model of the microbiome of
            elderly subjects
  JOURNAL   Gut Microbes 13 (1), 1-19 (2021)
   PUBMED   33993839
REFERENCE   2  (bases 1 to 2126396)
  AUTHORS   Harris,H.M.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2019) Microbiology Department, University College
            Cork, Western road, Cork, Cork 0000, Ireland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WQPL00000000.1.
            The Collinsella aerofaciens whole genome shotgun (WGS) project has
            the project accession NZ_WQPL00000000.  This version of the project
            (01) has the accession number NZ_WQPL01000000, and consists of
            sequences WQPL01000001-WQPL01000079.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 203.231x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_018785245.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:07:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,886
            CDSs (total)                      :: 1,819
            Genes (coding)                    :: 1,801
            CDSs (with protein)               :: 1,801
            Genes (RNA)                       :: 67
            rRNAs                             :: 1, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 4 (23S)
            tRNAs                             :: 58
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 18
            CDSs (without protein)            :: 18
            Pseudo Genes (ambiguous residues) :: 0 of 18
            Pseudo Genes (frameshifted)       :: 1 of 18
            Pseudo Genes (incomplete)         :: 16 of 18
            Pseudo Genes (internal stop)      :: 1 of 18
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2126396
                     /organism="Collinsella aerofaciens"
                     /mol_type="genomic DNA"
                     /strain="MCC356"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:74426"
                     /geo_loc_name="Ireland"
                     /lat_lon="51.8985 N 8.4756 W"
WGS         WQPL01000001-WQPL01000079
WGS_SCAFLD  NZ_WQPL01000001-NZ_WQPL01000079
//
LOCUS       NZ_JSCF01000000      4005128 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Clostridium botulinum strain CFSAN024410, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JSCF00000000
VERSION     NZ_JSCF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03114998
            Assembly: GCF_000769495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium botulinum
  ORGANISM  Clostridium botulinum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium; Clostridium botulinum group.
REFERENCE   1  (bases 1 to 4005128)
  AUTHORS   Gonzalez-Escalona,N., Thirunavukkarasu,N., Singh,A., Toro,M.,
            Brown,E.W., Zink,D., Rummel,A. and Sharma,S.K.
  TITLE     Draft Genome Sequence of Bivalent Clostridium botulinum Strain
            IBCA10-7060, Encoding Botulinum Neurotoxin B and a New FA Mosaic
            Type
  JOURNAL   Genome Announc 2 (6), e01275-14 (2014)
   PUBMED   25502671
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4005128)
  AUTHORS   Timme,R., Allard,M.W., Strain,E., Evans,P.S. and Brown,E.
  TITLE     Whole genome shotgun sequencing of cultured foodborne pathogen
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 4005128)
  AUTHORS   Strain,E.A., Allard,M.W., Payne,J.S., Evans,P.S. and Timme,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-OCT-2014) Center for Food Safety and Applied
            Nutrition, United States Food and Drug Administration, 5100 Paint
            Branch Parkway, College Park, MD 20740, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JSCF00000000.1.
            The Clostridium botulinum whole genome shotgun (WGS) project has
            the project accession NZ_JSCF00000000.  This version of the project
            (01) has the accession number NZ_JSCF01000000, and consists of
            sequences JSCF01000001-JSCF01000131.
            Bacterial culture available from Dwayne Roberson, FDA College Park
            Campus, 5100 Paint Branch Parkway, College Park, MD 20740.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 7.5
            Assembly Name         :: CFSAN024410_01.0
            Genome Coverage       :: 140x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000769495.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:39:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,928
            CDSs (total)                      :: 3,849
            Genes (coding)                    :: 3,734
            CDSs (with protein)               :: 3,734
            Genes (RNA)                       :: 79
            rRNAs                             :: 4, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 4, 1 (16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 40 of 115
            Pseudo Genes (incomplete)         :: 63 of 115
            Pseudo Genes (internal stop)      :: 29 of 115
            Pseudo Genes (multiple problems)  :: 15 of 115
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4005128
                     /organism="Clostridium botulinum"
                     /mol_type="genomic DNA"
                     /strain="CFSAN024410"
                     /serovar="BH"
                     /isolation_source="infant stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:1491"
                     /geo_loc_name="USA"
                     /collection_date="2010"
                     /collected_by="United States Food and Drug Administration|
                     Center for Food Safety and Applied Nutrition"
                     /note="strain co-identity: CFSAN024410=IBCA10-7060"
WGS         JSCF01000001-JSCF01000131
WGS_SCAFLD  NZ_JSCF01000001-NZ_JSCF01000131
//
LOCUS       NZ_LMTO01000000      1201385 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Candidatus Liberibacter asiaticus isolate SGCA5, whole genome
            shotgun sequencing project.
ACCESSION   NZ_LMTO00000000
VERSION     NZ_LMTO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04209216
            Assembly: GCF_001430705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Candidatus Liberibacter asiaticus
  ORGANISM  Candidatus Liberibacter asiaticus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Liberibacter.
REFERENCE   1  (bases 1 to 1201385)
  AUTHORS   Wu,F., Kumagai,L., Liang,G., Deng,X., Zheng,Z., Keremane,M. and
            Chen,J.
  TITLE     Draft Genome Sequence of 'Candidatus Liberibacter asiaticus' from a
            Citrus Tree in San Gabriel, California
  JOURNAL   Genome Announc 3 (6), e01508-15 (2015)
   PUBMED   26701083
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1201385)
  AUTHORS   Wu,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2015) San Joaquin Valley Agricultural Sciences
            Center, USDA-ARS, 9611 South Riverbend Avenue, Parlier, CA 93648,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LMTO00000000.1.
            The Candidatus Liberibacter asiaticus whole genome shotgun (WGS)
            project has the project accession NZ_LMTO00000000.  This version of
            the project (01) has the accession number NZ_LMTO01000000, and
            consists of sequences LMTO01000001-LMTO01000056.
            Extracted from total plant DNA which was from petiole and leaf
            midrib tissue of an orange citrus. This year (2015), 10
            CLas-infected trees were found in San Gabriel, California. The DNA
            is from tree NO. 5 with the highest CLas concentration.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 2015
            Assembly Method           :: Bowtie2 v. 2.2.6
            Reference-guided Assembly :: GCA_001296945.1
            Genome Coverage           :: 12.0x
            Sequencing Technology     :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001430705.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:34:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,113
            CDSs (total)                      :: 1,068
            Genes (coding)                    :: 1,031
            CDSs (with protein)               :: 1,031
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 14 of 37
            Pseudo Genes (incomplete)         :: 24 of 37
            Pseudo Genes (internal stop)      :: 7 of 37
            Pseudo Genes (multiple problems)  :: 7 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1201385
                     /organism="Candidatus Liberibacter asiaticus"
                     /mol_type="genomic DNA"
                     /isolate="SGCA5"
                     /isolation_source="total plant DNA from petiole and
                     leafmidrib tissue of orange citrus CLas-infected tree
                     NO.5"
                     /host="orange citrus"
                     /db_xref="taxon:34021"
                     /geo_loc_name="USA: California, San Gabriel"
                     /collection_date="2015"
WGS         LMTO01000001-LMTO01000056
WGS_SCAFLD  NZ_LMTO01000001-NZ_LMTO01000056
//
LOCUS       NZ_JAENQU010000000   3242520 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Clostridium perfringens strain CHD16571R, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAENQU000000000
VERSION     NZ_JAENQU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17106918
            Assembly: GCF_017590675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium perfringens
  ORGANISM  Clostridium perfringens
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (bases 1 to 3242520)
  AUTHORS   Smith,A.H. and Geier,R.
  TITLE     Comparative genomics of Clostridium perfringens reveals patterns of
            host-associated phylogenetic clades and virulence factors
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3242520)
  AUTHORS   Smith,A.H. and Geier,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-DEC-2020) Arm and Hammer Animal and Food Production,
            Church and Dwight, W227 N752 Westmound Dr., Waukesha, WI 53186, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAENQU000000000.1.
            The Clostridium perfringens whole genome shotgun (WGS) project has
            the project accession NZ_JAENQU000000000.  This version of the
            project (01) has the accession number NZ_JAENQU010000000, and
            consists of sequences JAENQU010000001-JAENQU010000030.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 05-FEB-2020
            Assembly Method        :: SPAdes v. 3.13.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 149x
            Sequencing Technology  :: Illumina iSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017590675.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:16:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,996
            CDSs (total)                      :: 2,904
            Genes (coding)                    :: 2,881
            CDSs (with protein)               :: 2,881
            Genes (RNA)                       :: 92
            rRNAs                             :: 9, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 76
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 23
            CDSs (without protein)            :: 23
            Pseudo Genes (ambiguous residues) :: 0 of 23
            Pseudo Genes (frameshifted)       :: 6 of 23
            Pseudo Genes (incomplete)         :: 17 of 23
            Pseudo Genes (internal stop)      :: 6 of 23
            Pseudo Genes (multiple problems)  :: 4 of 23
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3242520
                     /organism="Clostridium perfringens"
                     /mol_type="genomic DNA"
                     /strain="CHD16571R"
                     /isolation_source="intestine"
                     /host="Bos taurus"
                     /db_xref="taxon:1502"
                     /geo_loc_name="USA"
                     /collection_date="2017-01-13"
                     /collected_by="AHANFP"
WGS         JAENQU010000001-JAENQU010000030
WGS_SCAFLD  NZ_JAENQU010000001-NZ_JAENQU010000030
//
LOCUS       NZ_JBXGJB010000000   2317067 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Clostridium sp. isolate SUG3752, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGJB000000000
VERSION     NZ_JBXGJB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52836070
            Sequence Read Archive: SRR21357600
            Assembly: GCF_056857275.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Clostridium sp. (milk metagenome)
  ORGANISM  Clostridium sp.
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (bases 1 to 2317067)
  AUTHORS   Holman,D.B., Gzyl,K.E. and Kommadath,A.
  TITLE     Metagenome-assembled genomes from sow colostrum and milk
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2317067)
  AUTHORS   Holman,D.B., Gzyl,K.E. and Kommadath,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-NOV-2025) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGJB000000000.1.
            The Clostridium sp. whole genome shotgun (WGS) project has the
            project accession NZ_JBXGJB000000000.  This version of the project
            (01) has the accession number NZ_JBXGJB010000000, and consists of
            sequences JBXGJB010000001-JBXGJB010000138.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v.1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 34.2x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857275.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:12:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,314
            CDSs (total)                      :: 2,239
            Genes (coding)                    :: 2,182
            CDSs (with protein)               :: 2,182
            Genes (RNA)                       :: 75
            rRNAs                             :: 4, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 3 (5S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 5 of 57
            Pseudo Genes (incomplete)         :: 52 of 57
            Pseudo Genes (internal stop)      :: 4 of 57
            Pseudo Genes (multiple problems)  :: 4 of 57
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2317067
                     /organism="Clostridium sp."
                     /mol_type="genomic DNA"
                     /isolate="SUG3752"
                     /isolation_source="milk"
                     /host="pig"
                     /db_xref="taxon:1506"
                     /environmental_sample
                     /geo_loc_name="Canada: Alberta, Lacombe"
                     /lat_lon="52.4685 N 113.7307 W"
                     /altitude="850 m"
                     /collection_date="2020"
                     /metagenome_source="milk metagenome"
                     /metagenomic
WGS         JBXGJB010000001-JBXGJB010000138
WGS_SCAFLD  NZ_JBXGJB010000001-NZ_JBXGJB010000138
//
LOCUS       NZ_JBXGIX010000000   2267984 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Corynebacterium camporealensis isolate SUG3756, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBXGIX000000000
VERSION     NZ_JBXGIX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52836074
            Sequence Read Archive: SRR21357686
            Assembly: GCF_056857155.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Corynebacterium camporealensis (milk metagenome)
  ORGANISM  Corynebacterium camporealensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2267984)
  AUTHORS   Holman,D.B., Gzyl,K.E. and Kommadath,A.
  TITLE     Metagenome-assembled genomes from sow colostrum and milk
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2267984)
  AUTHORS   Holman,D.B., Gzyl,K.E. and Kommadath,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-NOV-2025) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGIX000000000.1.
            The Corynebacterium camporealensis whole genome shotgun (WGS)
            project has the project accession NZ_JBXGIX000000000.  This version
            of the project (01) has the accession number NZ_JBXGIX010000000,
            and consists of sequences JBXGIX010000001-JBXGIX010000202.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v.1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 14.4x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857155.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:18:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,295
            CDSs (total)                      :: 2,242
            Genes (coding)                    :: 2,170
            CDSs (with protein)               :: 2,170
            Genes (RNA)                       :: 53
            rRNAs                             :: 3 (5S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 48
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 72
            CDSs (without protein)            :: 72
            Pseudo Genes (ambiguous residues) :: 0 of 72
            Pseudo Genes (frameshifted)       :: 8 of 72
            Pseudo Genes (incomplete)         :: 62 of 72
            Pseudo Genes (internal stop)      :: 5 of 72
            Pseudo Genes (multiple problems)  :: 2 of 72
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2267984
                     /organism="Corynebacterium camporealensis"
                     /mol_type="genomic DNA"
                     /isolate="SUG3756"
                     /isolation_source="Colostrum"
                     /host="pig"
                     /db_xref="taxon:161896"
                     /environmental_sample
                     /geo_loc_name="Canada: Alberta, Lacombe"
                     /lat_lon="52.4685 N 113.7307 W"
                     /altitude="850 m"
                     /collection_date="2020"
                     /metagenome_source="milk metagenome"
                     /metagenomic
WGS         JBXGIX010000001-JBXGIX010000202
WGS_SCAFLD  NZ_JBXGIX010000001-NZ_JBXGIX010000202
//
LOCUS       NZ_JRTF01000000      5331407 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain RU2 LB36, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JRTF00000000
VERSION     NZ_JRTF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02872776
            Assembly: GCF_001412755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5331407)
  AUTHORS   Saxer,G., Krepps,M.D., Merkley,E.D., Ansong,C., Deatherage
            Kaiser,B.L., Valovska,M.T., Ristic,N., Yeh,P.T., Prakash,V.P.,
            Leiser,O.P., Nakhleh,L., Gibbons,H.S., Kreuzer,H.W. and Shamoo,Y.
  TITLE     Mutations in global regulators lead to metabolic selection during
            adaptation to complex environments
  JOURNAL   PLoS Genet 10 (12), e1004872 (2014)
   PUBMED   25501822
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5331407)
  AUTHORS   Broomall,S., Ait-Ichou,M., Insalaco,J., Liem,A., Roth,P., Hill,J.,
            Fochler,E., Krepps,M.D., Gibbons,H.S. and Rosenzweig,C.N.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-SEP-2014) Genomic Science Team, US Army Edgewood
            Chemical Biological Center, 5183 Blackhawk Rd, Aberdeen Proving
            Ground, MD 21010, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JRTF00000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JRTF00000000.  This version of the project
            (01) has the accession number NZ_JRTF01000000, and consists of
            sequences JRTF01000001-JRTF01000163.
            Source DNA available from the Department of Biochemistry and Cell
            Biology MS-1140, Rice University, 6100 Main Street, Houston, TX
            77005, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.07
            Genome Coverage       :: 115x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001412755.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:50:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,295
            CDSs (total)                      :: 5,239
            Genes (coding)                    :: 5,085
            CDSs (with protein)               :: 5,085
            Genes (RNA)                       :: 56
            rRNAs                             :: 3, 2 (16S, 23S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 154
            CDSs (without protein)            :: 154
            Pseudo Genes (ambiguous residues) :: 0 of 154
            Pseudo Genes (frameshifted)       :: 40 of 154
            Pseudo Genes (incomplete)         :: 114 of 154
            Pseudo Genes (internal stop)      :: 20 of 154
            Pseudo Genes (multiple problems)  :: 18 of 154
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5331407
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="RU2 LB36"
                     /isolation_source="parent strain RU2 evolved under
                     selective conditions; LB evolved gen 500 Population GS"
                     /db_xref="taxon:546"
                     /geo_loc_name="USA: Houston, TX"
                     /collection_date="2011-11-16"
                     /collected_by="Gerda Saxer"
WGS         JRTF01000001-JRTF01000163
WGS_SCAFLD  NZ_JRTF01000001-NZ_JRTF01000163
//
LOCUS       NZ_JRTC01000000      5330376 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain RU2 LB33, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JRTC00000000
VERSION     NZ_JRTC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02872773
            Assembly: GCF_001413155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5330376)
  AUTHORS   Saxer,G., Krepps,M.D., Merkley,E.D., Ansong,C., Deatherage
            Kaiser,B.L., Valovska,M.T., Ristic,N., Yeh,P.T., Prakash,V.P.,
            Leiser,O.P., Nakhleh,L., Gibbons,H.S., Kreuzer,H.W. and Shamoo,Y.
  TITLE     Mutations in global regulators lead to metabolic selection during
            adaptation to complex environments
  JOURNAL   PLoS Genet 10 (12), e1004872 (2014)
   PUBMED   25501822
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5330376)
  AUTHORS   Broomall,S., Ait-Ichou,M., Insalaco,J., Liem,A., Roth,P., Hill,J.,
            Fochler,E., Krepps,M.D., Gibbons,H.S. and Rosenzweig,C.N.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-SEP-2014) Genomic Science Team, US Army Edgewood
            Chemical Biological Center, 5183 Blackhawk Rd, Aberdeen Proving
            Ground, MD 21010, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JRTC00000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JRTC00000000.  This version of the project
            (01) has the accession number NZ_JRTC01000000, and consists of
            sequences JRTC01000001-JRTC01000163.
            Source DNA available from the Department of Biochemistry and Cell
            Biology MS-1140, Rice University, 6100 Main Street, Houston, TX
            77005, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.07
            Genome Coverage       :: 44x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001413155.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:48:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,297
            CDSs (total)                      :: 5,243
            Genes (coding)                    :: 5,091
            CDSs (with protein)               :: 5,091
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 152
            CDSs (without protein)            :: 152
            Pseudo Genes (ambiguous residues) :: 0 of 152
            Pseudo Genes (frameshifted)       :: 40 of 152
            Pseudo Genes (incomplete)         :: 112 of 152
            Pseudo Genes (internal stop)      :: 19 of 152
            Pseudo Genes (multiple problems)  :: 17 of 152
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5330376
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="RU2 LB33"
                     /isolation_source="parent strain RU2 evolved under
                     selective conditions; LB evolved gen 500 Population GS"
                     /db_xref="taxon:546"
                     /geo_loc_name="USA: Houston, TX"
                     /collection_date="2011-11-16"
                     /collected_by="Gerda Saxer"
WGS         JRTC01000001-JRTC01000163
WGS_SCAFLD  NZ_JRTC01000001-NZ_JRTC01000163
//
LOCUS       NZ_LFQF01000000      3929760 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Clostridium botulinum strain SU0729, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LFQF00000000
VERSION     NZ_LFQF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03779955
            Assembly: GCF_001574355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium botulinum
  ORGANISM  Clostridium botulinum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium; Clostridium botulinum group.
REFERENCE   1  (bases 1 to 3929760)
  AUTHORS   Williamson,C.H., Sahl,J.W., Smith,T.J., Xie,G., Foley,B.T.,
            Smith,L.A., Fernandez,R.A., Lindstrom,M., Korkeala,H., Keim,P.,
            Foster,J. and Hill,K.
  TITLE     Comparative genomic analyses reveal broad diversity in
            botulinum-toxin-producing Clostridia
  JOURNAL   BMC Genomics 17, 180 (2016)
   PUBMED   26939550
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3929760)
  AUTHORS   Williamson,C.H.D., Sahl,J.W., Smith,T.J., Xie,G., Foley,B.T.,
            Smith,L.A., Fernandez,R.A., Lindstrom,M., Korkeala,H., Keim,P.,
            Foster,J. and Hill,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JUN-2015) Center for Microbial Genetics and Genomics,
            Northern Arizona University, 1298 S Knoles Drive, Flagstaff, AZ
            86011-4073, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LFQF00000000.1.
            The Clostridium botulinum whole genome shotgun (WGS) project has
            the project accession NZ_LFQF00000000.  This version of the project
            (01) has the accession number NZ_LFQF01000000, and consists of
            sequences LFQF01000001-LFQF01000072.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2014
            Assembly Method        :: SPAdes v. 3.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 45.0x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001574355.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:43:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,725
            CDSs (total)                      :: 3,664
            Genes (coding)                    :: 3,555
            CDSs (with protein)               :: 3,555
            Genes (RNA)                       :: 61
            rRNAs                             :: 8, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 36 of 109
            Pseudo Genes (incomplete)         :: 66 of 109
            Pseudo Genes (internal stop)      :: 24 of 109
            Pseudo Genes (multiple problems)  :: 13 of 109
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3929760
                     /organism="Clostridium botulinum"
                     /mol_type="genomic DNA"
                     /strain="SU0729"
                     /serotype="A"
                     /isolation_source="soil"
                     /db_xref="taxon:1491"
                     /geo_loc_name="Argentina"
                     /collection_date="1987"
                     /collected_by="Universidad Nacional de Cuyo"
                     /subtype="A1"
                     /subgroup="Group I"
WGS         LFQF01000001-LFQF01000072
WGS_SCAFLD  NZ_LFQF01000001-NZ_LFQF01000072
//
LOCUS       NZ_JXMY01000000      3937212 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Clostridium botulinum strain 277-00, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JXMY00000000
VERSION     NZ_JXMY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03274242
            Assembly: GCF_000830755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium botulinum
  ORGANISM  Clostridium botulinum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium; Clostridium botulinum group.
REFERENCE   1  (bases 1 to 3937212)
  AUTHORS   Mazuet,C., Bouchier,C. and Popoff,M.R.
  TITLE     Draft Genome Sequence of Clostridium botulinum Strain 277-00 Type
            B2
  JOURNAL   Genome Announc 3 (2), e00211-15 (2015)
   PUBMED   25838479
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3937212)
  AUTHORS   Mazuet,C., Bouchier,C. and Popoff,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JAN-2015) Microbiology, Institut Pasteur, 25 rue du
            Dr Roux, Paris 75015, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JXMY00000000.1.
            The Clostridium botulinum whole genome shotgun (WGS) project has
            the project accession NZ_JXMY00000000.  This version of the project
            (01) has the accession number NZ_JXMY01000000, and consists of
            sequences JXMY01000001-JXMY01000090.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2014
            Assembly Method        :: CLC NGS Cell v. 4.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 4.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000830755.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:43:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,886
            CDSs (total)                      :: 3,809
            Genes (coding)                    :: 3,697
            CDSs (with protein)               :: 3,697
            Genes (RNA)                       :: 77
            rRNAs                             :: 3, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 38 of 112
            Pseudo Genes (incomplete)         :: 63 of 112
            Pseudo Genes (internal stop)      :: 27 of 112
            Pseudo Genes (multiple problems)  :: 13 of 112
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3937212
                     /organism="Clostridium botulinum"
                     /mol_type="genomic DNA"
                     /strain="277-00"
                     /serotype="B2"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:1491"
                     /geo_loc_name="Iran"
                     /collection_date="2000"
                     /collected_by="Institut Pasteur"
WGS         JXMY01000001-JXMY01000090
WGS_SCAFLD  NZ_JXMY01000001-NZ_JXMY01000090
//
LOCUS       NZ_JRSY01000000      5335522 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain RU2 LB29, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JRSY00000000
VERSION     NZ_JRSY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02872769
            Assembly: GCF_001412735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5335522)
  AUTHORS   Saxer,G., Krepps,M.D., Merkley,E.D., Ansong,C., Deatherage
            Kaiser,B.L., Valovska,M.T., Ristic,N., Yeh,P.T., Prakash,V.P.,
            Leiser,O.P., Nakhleh,L., Gibbons,H.S., Kreuzer,H.W. and Shamoo,Y.
  TITLE     Mutations in global regulators lead to metabolic selection during
            adaptation to complex environments
  JOURNAL   PLoS Genet 10 (12), e1004872 (2014)
   PUBMED   25501822
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5335522)
  AUTHORS   Broomall,S., Ait-Ichou,M., Insalaco,J., Liem,A., Roth,P., Hill,J.,
            Fochler,E., Krepps,M.D., Gibbons,H.S. and Rosenzweig,C.N.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-SEP-2014) Genomic Science Team, US Army Edgewood
            Chemical Biological Center, 5183 Blackhawk Rd, Aberdeen Proving
            Ground, MD 21010, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JRSY00000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JRSY00000000.  This version of the project
            (01) has the accession number NZ_JRSY01000000, and consists of
            sequences JRSY01000001-JRSY01000251.
            Source DNA available from the Department of Biochemistry and Cell
            Biology MS-1140, Rice University, 6100 Main Street, Houston, TX
            77005, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.07
            Genome Coverage       :: 359x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001412735.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:56:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,367
            CDSs (total)                      :: 5,311
            Genes (coding)                    :: 5,134
            CDSs (with protein)               :: 5,134
            Genes (RNA)                       :: 56
            rRNAs                             :: 3, 3 (16S, 23S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 177
            CDSs (without protein)            :: 177
            Pseudo Genes (ambiguous residues) :: 0 of 177
            Pseudo Genes (frameshifted)       :: 42 of 177
            Pseudo Genes (incomplete)         :: 135 of 177
            Pseudo Genes (internal stop)      :: 20 of 177
            Pseudo Genes (multiple problems)  :: 18 of 177
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5335522
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="RU2 LB29"
                     /isolation_source="parent strain RU2 evolved under
                     selective conditions; LB evolved gen 500 Population GS"
                     /db_xref="taxon:546"
                     /geo_loc_name="USA: Houston, TX"
                     /collection_date="2011-11-16"
                     /collected_by="Gerda Saxer"
WGS         JRSY01000001-JRSY01000251
WGS_SCAFLD  NZ_JRSY01000001-NZ_JRSY01000251
//
LOCUS       NZ_JRTA01000000      5331248 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain RU2 LB31, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JRTA00000000
VERSION     NZ_JRTA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02872771
            Assembly: GCF_001413125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5331248)
  AUTHORS   Saxer,G., Krepps,M.D., Merkley,E.D., Ansong,C., Deatherage
            Kaiser,B.L., Valovska,M.T., Ristic,N., Yeh,P.T., Prakash,V.P.,
            Leiser,O.P., Nakhleh,L., Gibbons,H.S., Kreuzer,H.W. and Shamoo,Y.
  TITLE     Mutations in global regulators lead to metabolic selection during
            adaptation to complex environments
  JOURNAL   PLoS Genet 10 (12), e1004872 (2014)
   PUBMED   25501822
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5331248)
  AUTHORS   Broomall,S., Ait-Ichou,M., Insalaco,J., Liem,A., Roth,P., Hill,J.,
            Fochler,E., Krepps,M.D., Gibbons,H.S. and Rosenzweig,C.N.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-SEP-2014) Genomic Science Team, US Army Edgewood
            Chemical Biological Center, 5183 Blackhawk Rd, Aberdeen Proving
            Ground, MD 21010, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JRTA00000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JRTA00000000.  This version of the project
            (01) has the accession number NZ_JRTA01000000, and consists of
            sequences JRTA01000001-JRTA01000157.
            Source DNA available from the Department of Biochemistry and Cell
            Biology MS-1140, Rice University, 6100 Main Street, Houston, TX
            77005, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.07
            Genome Coverage       :: 43x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001413125.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:58:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,294
            CDSs (total)                      :: 5,238
            Genes (coding)                    :: 5,086
            CDSs (with protein)               :: 5,086
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 3, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 152
            CDSs (without protein)            :: 152
            Pseudo Genes (ambiguous residues) :: 0 of 152
            Pseudo Genes (frameshifted)       :: 40 of 152
            Pseudo Genes (incomplete)         :: 112 of 152
            Pseudo Genes (internal stop)      :: 19 of 152
            Pseudo Genes (multiple problems)  :: 17 of 152
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5331248
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="RU2 LB31"
                     /isolation_source="parent strain RU2 evolved under
                     selective conditions; LB evolved gen 500 Population GS"
                     /db_xref="taxon:546"
                     /geo_loc_name="USA: Houston, TX"
                     /collection_date="2011-11-16"
                     /collected_by="Gerda Saxer"
WGS         JRTA01000001-JRTA01000157
WGS_SCAFLD  NZ_JRTA01000001-NZ_JRTA01000157
//
LOCUS       NZ_LFQG01000000      3945914 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Clostridium botulinum strain SU0635W, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LFQG00000000
VERSION     NZ_LFQG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03779980
            Assembly: GCF_001574365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium botulinum
  ORGANISM  Clostridium botulinum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium; Clostridium botulinum group.
REFERENCE   1  (bases 1 to 3945914)
  AUTHORS   Williamson,C.H., Sahl,J.W., Smith,T.J., Xie,G., Foley,B.T.,
            Smith,L.A., Fernandez,R.A., Lindstrom,M., Korkeala,H., Keim,P.,
            Foster,J. and Hill,K.
  TITLE     Comparative genomic analyses reveal broad diversity in
            botulinum-toxin-producing Clostridia
  JOURNAL   BMC Genomics 17, 180 (2016)
   PUBMED   26939550
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3945914)
  AUTHORS   Williamson,C.H.D., Sahl,J.W., Smith,T.J., Xie,G., Foley,B.T.,
            Smith,L.A., Fernandez,R.A., Lindstrom,M., Korkeala,H., Keim,P.,
            Foster,J. and Hill,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JUN-2015) Center for Microbial Genetics and Genomics,
            Northern Arizona University, 1298 S Knoles Drive, Flagstaff, AZ
            86011-4073, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LFQG00000000.1.
            The Clostridium botulinum whole genome shotgun (WGS) project has
            the project accession NZ_LFQG00000000.  This version of the project
            (01) has the accession number NZ_LFQG01000000, and consists of
            sequences LFQG01000001-LFQG01000137.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2014
            Assembly Method        :: SPAdes v. 3.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 38.0x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001574365.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:52:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,795
            CDSs (total)                      :: 3,728
            Genes (coding)                    :: 3,619
            CDSs (with protein)               :: 3,619
            Genes (RNA)                       :: 67
            rRNAs                             :: 6, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 3 (5S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 32 of 109
            Pseudo Genes (incomplete)         :: 66 of 109
            Pseudo Genes (internal stop)      :: 31 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3945914
                     /organism="Clostridium botulinum"
                     /mol_type="genomic DNA"
                     /strain="SU0635W"
                     /serotype="A"
                     /isolation_source="soil"
                     /db_xref="taxon:1491"
                     /geo_loc_name="Argentina"
                     /collected_by="Universidad Nacional de Cuyo"
                     /subtype="A2"
                     /subgroup="Group I"
WGS         LFQG01000001-LFQG01000137
WGS_SCAFLD  NZ_LFQG01000001-NZ_LFQG01000137
//
LOCUS       NZ_LFQE01000000      3882852 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Clostridium botulinum strain SU0634, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LFQE00000000
VERSION     NZ_LFQE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03779979
            Assembly: GCF_001574335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium botulinum
  ORGANISM  Clostridium botulinum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium; Clostridium botulinum group.
REFERENCE   1  (bases 1 to 3882852)
  AUTHORS   Williamson,C.H., Sahl,J.W., Smith,T.J., Xie,G., Foley,B.T.,
            Smith,L.A., Fernandez,R.A., Lindstrom,M., Korkeala,H., Keim,P.,
            Foster,J. and Hill,K.
  TITLE     Comparative genomic analyses reveal broad diversity in
            botulinum-toxin-producing Clostridia
  JOURNAL   BMC Genomics 17, 180 (2016)
   PUBMED   26939550
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3882852)
  AUTHORS   Williamson,C.H.D., Sahl,J.W., Smith,T.J., Xie,G., Foley,B.T.,
            Smith,L.A., Fernandez,R.A., Lindstrom,M., Korkeala,H., Keim,P.,
            Foster,J. and Hill,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JUN-2015) Center for Microbial Genetics and Genomics,
            Northern Arizona University, 1298 S Knoles Drive, Flagstaff, AZ
            86011-4073, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LFQE00000000.1.
            The Clostridium botulinum whole genome shotgun (WGS) project has
            the project accession NZ_LFQE00000000.  This version of the project
            (01) has the accession number NZ_LFQE01000000, and consists of
            sequences LFQE01000001-LFQE01000043.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 66.0x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001574335.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:49:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,676
            CDSs (total)                      :: 3,593
            Genes (coding)                    :: 3,494
            CDSs (with protein)               :: 3,494
            Genes (RNA)                       :: 83
            rRNAs                             :: 7, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 6, 2 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 99
            CDSs (without protein)            :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 32 of 99
            Pseudo Genes (incomplete)         :: 58 of 99
            Pseudo Genes (internal stop)      :: 28 of 99
            Pseudo Genes (multiple problems)  :: 15 of 99
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3882852
                     /organism="Clostridium botulinum"
                     /mol_type="genomic DNA"
                     /strain="SU0634"
                     /serotype="A"
                     /isolation_source="soil"
                     /db_xref="taxon:1491"
                     /geo_loc_name="Argentina"
                     /collection_date="1980"
                     /collected_by="Universidad Nacional de Cuyo"
                     /subtype="A2"
                     /subgroup="Group I"
WGS         LFQE01000001-LFQE01000043
WGS_SCAFLD  NZ_LFQE01000001-NZ_LFQE01000043
//
LOCUS       NZ_JRSW01000000      5331591 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain RU2 LB27, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JRSW00000000
VERSION     NZ_JRSW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02872767
            Assembly: GCF_001413045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5331591)
  AUTHORS   Saxer,G., Krepps,M.D., Merkley,E.D., Ansong,C., Deatherage
            Kaiser,B.L., Valovska,M.T., Ristic,N., Yeh,P.T., Prakash,V.P.,
            Leiser,O.P., Nakhleh,L., Gibbons,H.S., Kreuzer,H.W. and Shamoo,Y.
  TITLE     Mutations in global regulators lead to metabolic selection during
            adaptation to complex environments
  JOURNAL   PLoS Genet 10 (12), e1004872 (2014)
   PUBMED   25501822
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5331591)
  AUTHORS   Broomall,S., Ait-Ichou,M., Insalaco,J., Liem,A., Roth,P., Hill,J.,
            Fochler,E., Krepps,M.D., Gibbons,H.S. and Rosenzweig,C.N.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-SEP-2014) Genomic Science Team, US Army Edgewood
            Chemical Biological Center, 5183 Blackhawk Rd, Aberdeen Proving
            Ground, MD 21010, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JRSW00000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JRSW00000000.  This version of the project
            (01) has the accession number NZ_JRSW01000000, and consists of
            sequences JRSW01000001-JRSW01000169.
            Source DNA available from the Department of Biochemistry and Cell
            Biology MS-1140, Rice University, 6100 Main Street, Houston, TX
            77005, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.07
            Genome Coverage       :: 172x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001413045.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:55:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,302
            CDSs (total)                      :: 5,245
            Genes (coding)                    :: 5,091
            CDSs (with protein)               :: 5,091
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 154
            CDSs (without protein)            :: 154
            Pseudo Genes (ambiguous residues) :: 0 of 154
            Pseudo Genes (frameshifted)       :: 39 of 154
            Pseudo Genes (incomplete)         :: 115 of 154
            Pseudo Genes (internal stop)      :: 19 of 154
            Pseudo Genes (multiple problems)  :: 17 of 154
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5331591
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="RU2 LB27"
                     /isolation_source="parent strain RU2 evolved under
                     selective conditions; LB evolved gen 500 Population GS"
                     /db_xref="taxon:546"
                     /geo_loc_name="USA: Houston, TX"
                     /collection_date="2011-11-16"
                     /collected_by="Gerda Saxer"
WGS         JRSW01000001-JRSW01000169
WGS_SCAFLD  NZ_JRSW01000001-NZ_JRSW01000169
//
LOCUS       NZ_JRTD01000000      5330304 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain RU2 LB34, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JRTD00000000
VERSION     NZ_JRTD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02872774
            Assembly: GCF_001413165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5330304)
  AUTHORS   Saxer,G., Krepps,M.D., Merkley,E.D., Ansong,C., Deatherage
            Kaiser,B.L., Valovska,M.T., Ristic,N., Yeh,P.T., Prakash,V.P.,
            Leiser,O.P., Nakhleh,L., Gibbons,H.S., Kreuzer,H.W. and Shamoo,Y.
  TITLE     Mutations in global regulators lead to metabolic selection during
            adaptation to complex environments
  JOURNAL   PLoS Genet 10 (12), e1004872 (2014)
   PUBMED   25501822
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5330304)
  AUTHORS   Broomall,S., Ait-Ichou,M., Insalaco,J., Liem,A., Roth,P., Hill,J.,
            Fochler,E., Krepps,M.D., Gibbons,H.S. and Rosenzweig,C.N.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-SEP-2014) Genomic Science Team, US Army Edgewood
            Chemical Biological Center, 5183 Blackhawk Rd, Aberdeen Proving
            Ground, MD 21010, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JRTD00000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JRTD00000000.  This version of the project
            (01) has the accession number NZ_JRTD01000000, and consists of
            sequences JRTD01000001-JRTD01000163.
            Source DNA available from the Department of Biochemistry and Cell
            Biology MS-1140, Rice University, 6100 Main Street, Houston, TX
            77005, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.07
            Genome Coverage       :: 70x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001413165.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:00:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,297
            CDSs (total)                      :: 5,238
            Genes (coding)                    :: 5,084
            CDSs (with protein)               :: 5,084
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 3, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 154
            CDSs (without protein)            :: 154
            Pseudo Genes (ambiguous residues) :: 0 of 154
            Pseudo Genes (frameshifted)       :: 39 of 154
            Pseudo Genes (incomplete)         :: 115 of 154
            Pseudo Genes (internal stop)      :: 19 of 154
            Pseudo Genes (multiple problems)  :: 17 of 154
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5330304
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="RU2 LB34"
                     /isolation_source="parent strain RU2 evolved under
                     selective conditions; LB evolved gen 500 Population GS"
                     /db_xref="taxon:546"
                     /geo_loc_name="USA: Houston, TX"
                     /collection_date="2011-11-16"
                     /collected_by="Gerda Saxer"
WGS         JRTD01000001-JRTD01000163
WGS_SCAFLD  NZ_JRTD01000001-NZ_JRTD01000163
//
LOCUS       NZ_JRSZ01000000      5331770 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain RU2 LB30, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JRSZ00000000
VERSION     NZ_JRSZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02872770
            Assembly: GCF_001413095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5331770)
  AUTHORS   Saxer,G., Krepps,M.D., Merkley,E.D., Ansong,C., Deatherage
            Kaiser,B.L., Valovska,M.T., Ristic,N., Yeh,P.T., Prakash,V.P.,
            Leiser,O.P., Nakhleh,L., Gibbons,H.S., Kreuzer,H.W. and Shamoo,Y.
  TITLE     Mutations in global regulators lead to metabolic selection during
            adaptation to complex environments
  JOURNAL   PLoS Genet 10 (12), e1004872 (2014)
   PUBMED   25501822
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5331770)
  AUTHORS   Broomall,S., Ait-Ichou,M., Insalaco,J., Liem,A., Roth,P., Hill,J.,
            Fochler,E., Krepps,M.D., Gibbons,H.S. and Rosenzweig,C.N.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-SEP-2014) Genomic Science Team, US Army Edgewood
            Chemical Biological Center, 5183 Blackhawk Rd, Aberdeen Proving
            Ground, MD 21010, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JRSZ00000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JRSZ00000000.  This version of the project
            (01) has the accession number NZ_JRSZ01000000, and consists of
            sequences JRSZ01000001-JRSZ01000174.
            Source DNA available from the Department of Biochemistry and Cell
            Biology MS-1140, Rice University, 6100 Main Street, Houston, TX
            77005, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.07
            Genome Coverage       :: 151x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001413095.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:55:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,310
            CDSs (total)                      :: 5,251
            Genes (coding)                    :: 5,095
            CDSs (with protein)               :: 5,095
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 3, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 156
            CDSs (without protein)            :: 156
            Pseudo Genes (ambiguous residues) :: 0 of 156
            Pseudo Genes (frameshifted)       :: 40 of 156
            Pseudo Genes (incomplete)         :: 115 of 156
            Pseudo Genes (internal stop)      :: 20 of 156
            Pseudo Genes (multiple problems)  :: 17 of 156
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5331770
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="RU2 LB30"
                     /isolation_source="parent strain RU2 evolved under
                     selective conditions; LB evolved gen 500 Population GS"
                     /db_xref="taxon:546"
                     /geo_loc_name="USA: Houston, TX"
                     /collection_date="2011-11-16"
                     /collected_by="Gerda Saxer"
WGS         JRSZ01000001-JRSZ01000174
WGS_SCAFLD  NZ_JRSZ01000001-NZ_JRSZ01000174
//
LOCUS       NZ_JRTQ01000000      5256709 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain RU2 BHI23, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JRTQ00000000
VERSION     NZ_JRTQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02872799
            Assembly: GCF_001412855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5256709)
  AUTHORS   Saxer,G., Krepps,M.D., Merkley,E.D., Ansong,C., Deatherage
            Kaiser,B.L., Valovska,M.T., Ristic,N., Yeh,P.T., Prakash,V.P.,
            Leiser,O.P., Nakhleh,L., Gibbons,H.S., Kreuzer,H.W. and Shamoo,Y.
  TITLE     Mutations in global regulators lead to metabolic selection during
            adaptation to complex environments
  JOURNAL   PLoS Genet 10 (12), e1004872 (2014)
   PUBMED   25501822
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5256709)
  AUTHORS   Broomall,S., Ait-Ichou,M., Insalaco,J., Liem,A., Roth,P., Hill,J.,
            Fochler,E., Krepps,M.D., Gibbons,H.S. and Rosenzweig,C.N.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-SEP-2014) Genomic Science Team, US Army Edgewood
            Chemical Biological Center, 5183 Blackhawk Rd, Aberdeen Proving
            Ground, MD 21010, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JRTQ00000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JRTQ00000000.  This version of the project
            (01) has the accession number NZ_JRTQ01000000, and consists of
            sequences JRTQ01000001-JRTQ01000155.
            Source DNA available from the Department of Biochemistry and Cell
            Biology MS-1140, Rice University, 6100 Main Street, Houston, TX
            77005, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.07
            Genome Coverage       :: 132x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001412855.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:09:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,186
            CDSs (total)                      :: 5,127
            Genes (coding)                    :: 4,987
            CDSs (with protein)               :: 4,987
            Genes (RNA)                       :: 59
            rRNAs                             :: 4, 2 (16S, 23S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 140
            CDSs (without protein)            :: 140
            Pseudo Genes (ambiguous residues) :: 0 of 140
            Pseudo Genes (frameshifted)       :: 38 of 140
            Pseudo Genes (incomplete)         :: 102 of 140
            Pseudo Genes (internal stop)      :: 18 of 140
            Pseudo Genes (multiple problems)  :: 16 of 140
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5256709
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="RU2 BHI23"
                     /isolation_source="parent strain RU2 evolved under
                     selective conditions; BHI evolved gen 950 Population GS"
                     /db_xref="taxon:546"
                     /geo_loc_name="USA: Houston, TX"
                     /collection_date="2013-02-16"
                     /collected_by="Gerda Saxer"
WGS         JRTQ01000001-JRTQ01000155
WGS_SCAFLD  NZ_JRTQ01000001-NZ_JRTQ01000155
//
LOCUS       NZ_LEDM01000000      5457296 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter braakii strain GN02600, whole genome shotgun sequencing
            project.
ACCESSION   NZ_LEDM00000000
VERSION     NZ_LEDM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03732718
            Assembly: GCF_001022685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter braakii
  ORGANISM  Citrobacter braakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5457296)
  AUTHORS   Adams,M., Sutton,G., Nelson,K., Bonomo,R., McCorrison,J., Sanka,R.,
            Brinkac,L. and Nierman,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-JUN-2015) JCVI, 4120 Capricorn Lane, La Jolla, CA
            92037, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LEDM00000000.1.
            The Citrobacter braakii whole genome shotgun (WGS) project has the
            project accession NZ_LEDM00000000.  This version of the project
            (01) has the accession number NZ_LEDM01000000, and consists of
            sequences LEDM01000001-LEDM01000126.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1.0
            Expected Final Version :: Yes
            Genome Coverage        :: 119.14x
            Sequencing Technology  :: Illumina NextSeq500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001022685.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:18:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,338
            CDSs (total)                      :: 5,259
            Genes (coding)                    :: 5,116
            CDSs (with protein)               :: 5,116
            Genes (RNA)                       :: 79
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 66
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 143
            CDSs (without protein)            :: 143
            Pseudo Genes (ambiguous residues) :: 0 of 143
            Pseudo Genes (frameshifted)       :: 39 of 143
            Pseudo Genes (incomplete)         :: 112 of 143
            Pseudo Genes (internal stop)      :: 24 of 143
            Pseudo Genes (multiple problems)  :: 26 of 143
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5457296
                     /organism="Citrobacter braakii"
                     /mol_type="genomic DNA"
                     /strain="GN02600"
                     /isolation_source="bodily fluid"
                     /host="Homo sapiens"
                     /db_xref="taxon:57706"
                     /geo_loc_name="USA"
                     /lat_lon="36 N 78.9 W"
                     /collection_date="2007-09-01"
                     /collected_by="Vance Fowler"
WGS         LEDM01000001-LEDM01000126
WGS_SCAFLD  NZ_LEDM01000001-NZ_LEDM01000126
//
LOCUS       NZ_JRSU01000000      5331765 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain RU2 LB25, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JRSU00000000
VERSION     NZ_JRSU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02872765
            Assembly: GCF_001413035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5331765)
  AUTHORS   Saxer,G., Krepps,M.D., Merkley,E.D., Ansong,C., Deatherage
            Kaiser,B.L., Valovska,M.T., Ristic,N., Yeh,P.T., Prakash,V.P.,
            Leiser,O.P., Nakhleh,L., Gibbons,H.S., Kreuzer,H.W. and Shamoo,Y.
  TITLE     Mutations in global regulators lead to metabolic selection during
            adaptation to complex environments
  JOURNAL   PLoS Genet 10 (12), e1004872 (2014)
   PUBMED   25501822
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5331765)
  AUTHORS   Broomall,S., Ait-Ichou,M., Insalaco,J., Liem,A., Roth,P., Hill,J.,
            Fochler,E., Krepps,M.D., Gibbons,H.S. and Rosenzweig,C.N.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-SEP-2014) Genomic Science Team, US Army Edgewood
            Chemical Biological Center, 5183 Blackhawk Rd, Aberdeen Proving
            Ground, MD 21010, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JRSU00000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JRSU00000000.  This version of the project
            (01) has the accession number NZ_JRSU01000000, and consists of
            sequences JRSU01000001-JRSU01000151.
            Source DNA available from the Department of Biochemistry and Cell
            Biology MS-1140, Rice University, 6100 Main Street, Houston, TX
            77005, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.07
            Genome Coverage       :: 121x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001413035.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:16:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,293
            CDSs (total)                      :: 5,232
            Genes (coding)                    :: 5,079
            CDSs (with protein)               :: 5,079
            Genes (RNA)                       :: 61
            rRNAs                             :: 1, 3, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 153
            CDSs (without protein)            :: 153
            Pseudo Genes (ambiguous residues) :: 0 of 153
            Pseudo Genes (frameshifted)       :: 42 of 153
            Pseudo Genes (incomplete)         :: 111 of 153
            Pseudo Genes (internal stop)      :: 20 of 153
            Pseudo Genes (multiple problems)  :: 18 of 153
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5331765
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="RU2 LB25"
                     /isolation_source="parent strain RU2 evolved under
                     selective conditions; LB evolved gen 500 Population GS"
                     /db_xref="taxon:546"
                     /geo_loc_name="USA: Houston, TX"
                     /collection_date="2011-11-16"
                     /collected_by="Gerda Saxer"
WGS         JRSU01000001-JRSU01000151
WGS_SCAFLD  NZ_JRSU01000001-NZ_JRSU01000151
//
LOCUS       NZ_FORY01000000      3857862 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Celeribacter halophilus strain CGMCC 1.8891, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FORY00000000
VERSION     NZ_FORY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04488138
            Assembly: GCF_900114135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Celeribacter halophilus
  ORGANISM  Celeribacter halophilus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Celeribacter.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FORY00000000.1.
            The Celeribacter halophilus whole genome shotgun (WGS) project has
            the project accession NZ_FORY00000000.  This version of the project
            (01) has the accession number NZ_FORY01000000, and consists of
            sequences FORY01000001-FORY01000059.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900114135.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:25:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,768
            CDSs (total)                      :: 3,718
            Genes (coding)                    :: 3,675
            CDSs (with protein)               :: 3,675
            Genes (RNA)                       :: 50
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 12 of 43
            Pseudo Genes (incomplete)         :: 35 of 43
            Pseudo Genes (internal stop)      :: 3 of 43
            Pseudo Genes (multiple problems)  :: 7 of 43
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3857862
                     /organism="Celeribacter halophilus"
                     /mol_type="genomic DNA"
                     /strain="CGMCC 1.8891"
                     /type_material="type strain of Huaishuia halophila"
                     /db_xref="taxon:576117"
WGS         FORY01000001-FORY01000059
WGS_SCAFLD  NZ_FORY01000001-NZ_FORY01000059
//
LOCUS       NZ_JMTK01000000      1312416 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Candidatus Liberibacter solanacearum strain LsoNZ1, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JMTK00000000
VERSION     NZ_JMTK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02743496
            Assembly: GCF_000968085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Candidatus Liberibacter solanacearum
  ORGANISM  Candidatus Liberibacter solanacearum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Liberibacter.
REFERENCE   1  (bases 1 to 1312416)
  AUTHORS   Thompson,S.M., Johnson,C.P., Lu,A.Y., Frampton,R.A., Sullivan,K.L.,
            Fiers,M.W., Crowhurst,R.N., Pitman,A.R., Scott,I.A., Wen,A.,
            Gudmestad,N.C. and Smith,G.R.
  TITLE     Genomes of 'Candidatus Liberibacter solanacearum' Haplotype A from
            New Zealand and the United States Suggest Significant Genome
            Plasticity in the Species
  JOURNAL   Phytopathology 105 (7), 863-871 (2015)
   PUBMED   25822188
REFERENCE   2  (bases 1 to 1312416)
  AUTHORS   Thompson,S.M., Lu,A.Y., Fiers,M.W., Sullivan,K.L., Frampton,R.A.
            and Smith,G.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-FEB-2015) Molecular Bioprotection, NZ Institute for
            Plant and Food Research, Gerald St, Lincoln, Canterbury 7608, New
            Zealand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JMTK00000000.1.
            The Candidatus Liberibacter solanacearum whole genome shotgun (WGS)
            project has the project accession NZ_JMTK00000000.  This version of
            the project (01) has the accession number NZ_JMTK01000000, and
            consists of sequences JMTK01000001-JMTK01000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method           :: SOAPdenovo v. 1
            Genome Representation     :: Full
            Expected Final Version    :: No
            Reference-guided Assembly :: GCA_000183665.1
            Genome Coverage           :: 1000.0x
            Sequencing Technology     :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000968085.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:34:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,219
            CDSs (total)                      :: 1,162
            Genes (coding)                    :: 1,143
            CDSs (with protein)               :: 1,143
            Genes (RNA)                       :: 57
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 19
            CDSs (without protein)            :: 19
            Pseudo Genes (ambiguous residues) :: 0 of 19
            Pseudo Genes (frameshifted)       :: 8 of 19
            Pseudo Genes (incomplete)         :: 12 of 19
            Pseudo Genes (internal stop)      :: 3 of 19
            Pseudo Genes (multiple problems)  :: 4 of 19
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1312416
                     /organism="Candidatus Liberibacter solanacearum"
                     /mol_type="genomic DNA"
                     /strain="LsoNZ1"
                     /isolation_source="Insect"
                     /host="Bactericera cockerelli"
                     /db_xref="taxon:556287"
                     /geo_loc_name="New Zealand"
                     /lat_lon="43.64 S 172.48 E"
                     /collection_date="2010"
WGS         JMTK01000001-JMTK01000005
WGS_SCAFLD  NZ_JMTK01000001-NZ_JMTK01000005
//
LOCUS       NZ_AUZB01000000      4168550 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Clostridium botulinum A2B3 87, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AUZB00000000
VERSION     NZ_AUZB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02869849
            Assembly: GCF_000710995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium botulinum A2B3 87
  ORGANISM  Clostridium botulinum A2B3 87
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium; Clostridium botulinum group.
REFERENCE   1  (bases 1 to 4168550)
  AUTHORS   Giordani,F., Fillo,S., Anselmo,A., Palozzi,A.M., Fortunato,A.,
            Gentile,B., Pittiglio,V., Spagnolo,F., Anniballi,F., Fiore,A.,
            Auricchio,B., De Medici,D. and Lista,F.
  TITLE     Whole-Genome Sequence of Clostridium botulinum A2B3 87, a Highly
            Virulent Strain Involved in a Fatal Case of Foodborne Botulism in
            Italy
  JOURNAL   Genome Announc 3 (2), e00237-15 (2015)
   PUBMED   25814616
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4168550)
  AUTHORS   Giordani,F., Anselmo,A., Fillo,S., Palozzi,A.M., Fortunato,A.,
            Gentile,B., Ciammaruconi,A., Anniballi,F., De Medici,D. and
            Lista,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JUN-2014) Department of Molecular Biology, Immunology
            and Experimental Medicine, Army Medical and Veterinary Research
            Center, Via Santo Stefano Rotondo, 4, Rome 00184, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AUZB00000000.1.
            The Clostridium botulinum A2B3 87 whole genome shotgun (WGS)
            project has the project accession NZ_AUZB00000000.  This version of
            the project (01) has the accession number NZ_AUZB01000000, and
            consists of sequences AUZB01000001-AUZB01000013.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: GS De Novo Assembler v. 2.6; ABySS v.
                                     1.3.5
            Genome Coverage       :: 272.0x
            Sequencing Technology :: 454; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000710995.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:56:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,971
            CDSs (total)                      :: 3,904
            Genes (coding)                    :: 3,832
            CDSs (with protein)               :: 3,832
            Genes (RNA)                       :: 67
            rRNAs                             :: 2 (5S)
            complete rRNAs                    :: 2 (5S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 72
            CDSs (without protein)            :: 72
            Pseudo Genes (ambiguous residues) :: 0 of 72
            Pseudo Genes (frameshifted)       :: 29 of 72
            Pseudo Genes (incomplete)         :: 45 of 72
            Pseudo Genes (internal stop)      :: 11 of 72
            Pseudo Genes (multiple problems)  :: 10 of 72
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4168550
                     /organism="Clostridium botulinum A2B3 87"
                     /mol_type="genomic DNA"
                     /strain="A2B3 87"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:1379740"
                     /geo_loc_name="Italy: Sicilia"
                     /collection_date="1995"
WGS         AUZB01000001-AUZB01000013
WGS_SCAFLD  NZ_AUZB01000001-NZ_AUZB01000013
//
LOCUS       NZ_MCOP01000000      5439441 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain CF8_ST22, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MCOP00000000
VERSION     NZ_MCOP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05441430
            Assembly: GCF_001880825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5439441)
  AUTHORS   Villa,J., Viedma,E. and Chaves,F.
  TITLE     Citrobacter freundii CF_8_ST_22 Genome sequencing
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5439441)
  AUTHORS   Villa,J., Viedma,E. and Chaves,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-AUG-2016) Department of Microbiology, Hospital
            Universitary 12 de Octubre, Avda Cordoba S/N, Madrid 28041, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MCOP00000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_MCOP00000000.  This version of the project
            (01) has the accession number NZ_MCOP01000000, and consists of
            sequences MCOP01000001-MCOP01000218.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2015
            Assembly Method       :: SPAdes v. 3.6.2
            Genome Coverage       :: 30.0x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001880825.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:44:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,411
            CDSs (total)                      :: 5,335
            Genes (coding)                    :: 5,181
            CDSs (with protein)               :: 5,181
            Genes (RNA)                       :: 76
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 2, 1 (5S, 16S)
            tRNAs                             :: 61
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 154
            CDSs (without protein)            :: 154
            Pseudo Genes (ambiguous residues) :: 0 of 154
            Pseudo Genes (frameshifted)       :: 44 of 154
            Pseudo Genes (incomplete)         :: 108 of 154
            Pseudo Genes (internal stop)      :: 25 of 154
            Pseudo Genes (multiple problems)  :: 22 of 154
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5439441
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="CF8_ST22"
                     /host="Homo sapiens"
                     /db_xref="taxon:546"
                     /geo_loc_name="Spain: Madrid"
                     /collection_date="2013-02-12"
WGS         MCOP01000001-MCOP01000218
WGS_SCAFLD  NZ_MCOP01000001-NZ_MCOP01000218
//
LOCUS       NZ_SELK01000000      5496460 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter freundii strain 071G10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_SELK00000000
VERSION     NZ_SELK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10840491
            Assembly: GCF_004145665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5496460)
  AUTHORS   Couve-Deacon,E., Dabos,L., Bataille,C., Maurand,A., Valleix,D.,
            Durand-Fontanier,S., Pestourie,N., Ploy,M.-C. and Naas,T.
  TITLE     Molecular Epidemiology and Control of a OXA-48-producing
            Enterobacteriaceae Hospital Outbreak: Evidence for Horizontal
            Interspecies Transfer of an IncL/M plasmid
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5496460)
  AUTHORS   Dabos,L. and Naas,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JAN-2019) Hopital Bicetre, Bacteriology, EA7361,
            Universite Paris Sud, 78, rue general Leclerc, le Kremlin-Bicetre,
            Val-de-Marne 94275, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SELK00000000.1.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_SELK00000000.  This version of the project
            (01) has the accession number NZ_SELK01000000, and consists of
            sequences SELK01000001-SELK01000283.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 74x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004145665.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:42:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,463
            CDSs (total)                      :: 5,401
            Genes (coding)                    :: 5,235
            CDSs (with protein)               :: 5,235
            Genes (RNA)                       :: 62
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 1 of 166
            Pseudo Genes (frameshifted)       :: 37 of 166
            Pseudo Genes (incomplete)         :: 133 of 166
            Pseudo Genes (internal stop)      :: 17 of 166
            Pseudo Genes (multiple problems)  :: 19 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5496460
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="071G10"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:546"
                     /geo_loc_name="France: Limoges"
                     /lat_lon="45.8336 N 1.2611 E"
                     /collection_date="2017"
                     /collected_by="CHU-Limoges"
WGS         SELK01000001-SELK01000283
WGS_SCAFLD  NZ_SELK01000001-NZ_SELK01000283
//
LOCUS       NZ_JABAGD010000000   5627834 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Clostridium beijerinckii strain WB01_NA02, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABAGD000000000
VERSION     NZ_JABAGD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14558251
            Assembly: GCF_012843965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium beijerinckii
  ORGANISM  Clostridium beijerinckii
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (bases 1 to 5627834)
  AUTHORS   Hitch,T.C.A., Wylensek,D. and Clavel,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-APR-2020) Institute of Medical Microbiology,
            UniKlinik RWTH Aachen, Pauwelsstrasse, Aachen 52074, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABAGD000000000.1.
            The Clostridium beijerinckii whole genome shotgun (WGS) project has
            the project accession NZ_JABAGD000000000.  This version of the
            project (01) has the accession number NZ_JABAGD010000000, and
            consists of sequences JABAGD010000001-JABAGD010000137.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 300x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_012843965.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:59:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,132
            CDSs (total)                      :: 5,045
            Genes (coding)                    :: 4,978
            CDSs (with protein)               :: 4,978
            Genes (RNA)                       :: 87
            rRNAs                             :: 4, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 1, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 11 of 67
            Pseudo Genes (incomplete)         :: 57 of 67
            Pseudo Genes (internal stop)      :: 11 of 67
            Pseudo Genes (multiple problems)  :: 11 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5627834
                     /organism="Clostridium beijerinckii"
                     /mol_type="genomic DNA"
                     /strain="WB01_NA02"
                     /isolation_source="feces"
                     /host="Sus scrofa domesticus"
                     /db_xref="taxon:1520"
                     /geo_loc_name="Germany"
                     /collection_date="2018-03-03"
WGS         JABAGD010000001-JABAGD010000137
WGS_SCAFLD  NZ_JABAGD010000001-NZ_JABAGD010000137
//
LOCUS       NZ_JABTEO010000000   6133655 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Clostridium beijerinckii strain DJ186, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABTEO000000000
VERSION     NZ_JABTEO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09809286
            Assembly: GCF_013297225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium beijerinckii
  ORGANISM  Clostridium beijerinckii
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (bases 1 to 6133655)
  AUTHORS   Liew,F.E., Nogle,R., Abdalla,T., Rasor,B.J., Canter,C.,
            Jensen,R.O., Wang,L., Strutz,J., Chirania,P., De Tissera,S.,
            Mueller,A.P., Ruan,Z., Gao,A., Tran,L., Engle,N.L., Bromley,J.C.,
            Daniell,J., Conrado,R., Tschaplinski,T.J., Giannone,R.J.,
            Hettich,R.L., Karim,A.S., Simpson,S.D., Brown,S.D., Leang,C.,
            Jewett,M.C. and Kopke,M.
  TITLE     Carbon-negative production of acetone and isopropanol by gas
            fermentation at industrial pilot scale
  JOURNAL   Nat Biotechnol 40 (3), 335-344 (2022)
   PUBMED   35190685
REFERENCE   2  (bases 1 to 6133655)
  AUTHORS   Brown,S., Huntemann,M., Clum,A., Spunde,A., Palaniappan,K.,
            Ritter,S., Mikhailova,N., Chen,I.-M., Stamatis,D., Reddy,T.,
            O'Malley,R., Daum,C., Shapiro,N., Ivanova,N., Kyrpides,N. and
            Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUN-2020) Prokaryote Super Program, DOE Joint Genome
            Institute, 1 Cyclotron Road, Mail Stop: 91R0183, Berkeley, CA
            94720, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABTEO000000000.1.
            The Clostridium beijerinckii whole genome shotgun (WGS) project has
            the project accession NZ_JABTEO000000000.  This version of the
            project (01) has the accession number NZ_JABTEO010000000, and
            consists of sequences JABTEO010000001-JABTEO010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. smrtanalysis 2.3.0_p5, HGAP v. 3
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013297225.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:00:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,560
            CDSs (total)                      :: 5,405
            Genes (coding)                    :: 5,196
            CDSs (with protein)               :: 5,196
            Genes (RNA)                       :: 155
            rRNAs                             :: 18, 18, 17 (5S, 16S, 23S)
            complete rRNAs                    :: 18, 15, 17 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (16S)
            tRNAs                             :: 96
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 209
            CDSs (without protein)            :: 209
            Pseudo Genes (ambiguous residues) :: 0 of 209
            Pseudo Genes (frameshifted)       :: 163 of 209
            Pseudo Genes (incomplete)         :: 49 of 209
            Pseudo Genes (internal stop)      :: 10 of 209
            Pseudo Genes (multiple problems)  :: 12 of 209
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6133655
                     /organism="Clostridium beijerinckii"
                     /mol_type="genomic DNA"
                     /strain="DJ186"
                     /db_xref="taxon:1520"
WGS         JABTEO010000001-JABTEO010000009
WGS_SCAFLD  NZ_JABTEO010000001-NZ_JABTEO010000009
//
LOCUS       NZ_JACXSK010000000   5616212 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter braakii strain CC1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JACXSK000000000
VERSION     NZ_JACXSK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16177497
            Assembly: GCF_014712635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter braakii
  ORGANISM  Citrobacter braakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5616212)
  AUTHORS   Zhang,Y., Lei,C.W., Chen,X., Yao,T.G., Yu,J.W., Hu,W.L., Mao,X. and
            Wang,H.N.
  TITLE     Characterization of IncC Plasmids in Enterobacterales of
            Food-Producing Animals Originating From China
  JOURNAL   Front Microbiol 11, 580960 (2020)
   PUBMED   33193210
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5616212)
  AUTHORS   Zhang,Y., Lei,C.-W. and Wang,H.-N.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-SEP-2020) Sichuan University, College of Life
            Science, No. 29 Wangjiang Road, Chengdu, Sichuan 610064, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JACXSK000000000.1.
            The Citrobacter braakii whole genome shotgun (WGS) project has the
            project accession NZ_JACXSK000000000.  This version of the project
            (01) has the accession number NZ_JACXSK010000000, and consists of
            sequences JACXSK010000001-JACXSK010000105.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 395.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_014712635.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:15:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,572
            CDSs (total)                      :: 5,481
            Genes (coding)                    :: 5,362
            CDSs (with protein)               :: 5,362
            Genes (RNA)                       :: 91
            rRNAs                             :: 3, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 4, 2 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 29 of 119
            Pseudo Genes (incomplete)         :: 91 of 119
            Pseudo Genes (internal stop)      :: 21 of 119
            Pseudo Genes (multiple problems)  :: 21 of 119
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5616212
                     /organism="Citrobacter braakii"
                     /mol_type="genomic DNA"
                     /strain="CC1"
                     /host="poultry"
                     /db_xref="taxon:57706"
                     /geo_loc_name="China"
                     /collection_date="2016"
WGS         JACXSK010000001-JACXSK010000105
WGS_SCAFLD  NZ_JACXSK010000001-NZ_JACXSK010000105
//
LOCUS       NZ_WLVD01000000      5518639 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter braakii strain RWM.4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WLVD00000000
VERSION     NZ_WLVD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13156549
            Assembly: GCF_016859695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter braakii
  ORGANISM  Citrobacter braakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5518639)
  AUTHORS   Sousa,M., Tacao,M., Barauna,R., Silva,A., Ramos,R., Alves,A.,
            Manaia,C.M. and Henriques,I.
  TITLE     Carbapenem-resistant bacteria over a wastewater treatment plant:
            characterization of carbapenemase-producing Enterobacteriaceae
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5518639)
  AUTHORS   Araujo,S.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-OCT-2019) Biology, University of Aveiro, Campus of
            Santiago, Aveiro 3810, Portugal
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WLVD00000000.1.
            The Citrobacter braakii whole genome shotgun (WGS) project has the
            project accession NZ_WLVD00000000.  This version of the project
            (01) has the accession number NZ_WLVD01000000, and consists of
            sequences WLVD01000001-WLVD01000116.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Microlab, Biology
            Department, University of Aveiro 3810-193 Aveiro, Portugal.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.11.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 495.9x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_016859695.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:23:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,435
            CDSs (total)                      :: 5,351
            Genes (coding)                    :: 5,185
            CDSs (with protein)               :: 5,185
            Genes (RNA)                       :: 84
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 3, 3 (5S, 16S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 43 of 166
            Pseudo Genes (incomplete)         :: 123 of 166
            Pseudo Genes (internal stop)      :: 31 of 166
            Pseudo Genes (multiple problems)  :: 27 of 166
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5518639
                     /organism="Citrobacter braakii"
                     /mol_type="genomic DNA"
                     /strain="RWM.4"
                     /isolation_source="raw wastewater"
                     /db_xref="taxon:57706"
                     /geo_loc_name="Portugal: Porto"
                     /collection_date="2015-06"
WGS         WLVD01000001-WLVD01000116
WGS_SCAFLD  NZ_WLVD01000001-NZ_WLVD01000116
//
LOCUS       NZ_JAQPDL010000000   4734457 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Citrobacter koseri strain SM_2299, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAQPDL000000000
VERSION     NZ_JAQPDL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN31066035
            Assembly: GCF_029084045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter koseri
  ORGANISM  Citrobacter koseri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter.
REFERENCE   1  (bases 1 to 4734457)
  AUTHORS   Peirano,G.
  TITLE     Carbapenemase-producing Citrobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4734457)
  AUTHORS   Peirano,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2022) Microbiology, University of Calgary, 9,
            3535 Research Road NW, Calgary, Alberta T2L 2K8, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAQPDL000000000.1.
            The Citrobacter koseri whole genome shotgun (WGS) project has the
            project accession NZ_JAQPDL000000000.  This version of the project
            (01) has the accession number NZ_JAQPDL010000000, and consists of
            sequences JAQPDL010000001-JAQPDL010000019.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029084045.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:51:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,503
            CDSs (total)                      :: 4,432
            Genes (coding)                    :: 4,378
            CDSs (with protein)               :: 4,378
            Genes (RNA)                       :: 71
            rRNAs                             :: 2 (5S)
            complete rRNAs                    :: 2 (5S)
            tRNAs                             :: 61
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 20 of 54
            Pseudo Genes (incomplete)         :: 33 of 54
            Pseudo Genes (internal stop)      :: 11 of 54
            Pseudo Genes (multiple problems)  :: 7 of 54
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4734457
                     /organism="Citrobacter koseri"
                     /mol_type="genomic DNA"
                     /strain="SM_2299"
                     /isolation_source="abscess"
                     /host="Homo sapiens"
                     /db_xref="taxon:545"
                     /geo_loc_name="Australia"
                     /collection_date="2016"
                     /collected_by="SMART"
WGS         JAQPDL010000001-JAQPDL010000019
WGS_SCAFLD  NZ_JAQPDL010000001-NZ_JAQPDL010000019
//
LOCUS       NZ_CAXIPW010000000   2789050 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Candidatus Fukatsuia endosymbiont of Drepanosiphum platanoidis
            isolate f083b7f5-d28b-434c-aaf5-ab1cdccc28fd, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CAXIPW000000000
VERSION     NZ_CAXIPW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA115290483
            Sequence Read Archive: ERR10659260, ERR10662031
            Assembly: GCF_964030615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Candidatus Fukatsuia endosymbiont of Drepanosiphum platanoidis
  ORGANISM  Candidatus Fukatsuia endosymbiont of Drepanosiphum platanoidis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Candidatus Fukatsuia.
REFERENCE   1  (bases 1 to 2789050)
  CONSRTM   Wellcome Sanger Tree of Life Programme
  TITLE     Direct Submission
  JOURNAL   Submitted (19-APR-2024) WELLCOME SANGER INSTITUTE, Tree of Life,
            Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAXIPW000000000.1.
            The Candidatus Fukatsuia endosymbiont of Drepanosiphum platanoidis
            whole genome shotgun (WGS) project has the project accession
            NZ_CAXIPW000000000.  This version of the project (01) has the
            accession number NZ_CAXIPW010000000, and consists of sequences
            CAXIPW010000001-CAXIPW010000009.
            The genome assembly ihDrePlat2.Fukatsuia_sp_1.1 is based on 64x
            PacBio data generated by the Darwin Tree of Life Project
            (https://www.darwintreeoflife.org/). The primary target of
            sequencing was Drepanosiphum platanoidis. The PacBio assembly was
            generated with MarkerScan using Flye.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964030615.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:14:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,665
            CDSs (total)                      :: 2,596
            Genes (coding)                    :: 2,364
            CDSs (with protein)               :: 2,364
            Genes (RNA)                       :: 69
            rRNAs                             :: 6, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 232
            CDSs (without protein)            :: 232
            Pseudo Genes (ambiguous residues) :: 0 of 232
            Pseudo Genes (frameshifted)       :: 86 of 232
            Pseudo Genes (incomplete)         :: 176 of 232
            Pseudo Genes (internal stop)      :: 29 of 232
            Pseudo Genes (multiple problems)  :: 51 of 232
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2789050
                     /organism="Candidatus Fukatsuia endosymbiont of
                     Drepanosiphum platanoidis"
                     /mol_type="genomic DNA"
                     /isolate="f083b7f5-d28b-434c-aaf5-ab1cdccc28fd"
                     /db_xref="taxon:3077953"
WGS         CAXIPW010000001-CAXIPW010000009
WGS_SCAFLD  NZ_CAXIPW010000001-NZ_CAXIPW010000009
//
LOCUS       NZ_JBCGCR010000000   1681306 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Campylobacter coli strain XS14, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCGCR000000000
VERSION     NZ_JBCGCR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34134770
            Assembly: GCF_038440495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1681306)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Genetic diversity and antibiotic resistance characteristics of
            Campylobacter in laying hen farms in Hubei province
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1681306)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2023) Hubei Provincial Key Laboratory of Animal
            Pathogenic Microbiology, Institute of Animal Husbandry and
            Veterinary, Hubei Academy of Agricultural Sciences, Nanhu Avenue,
            Wuhan, Hubei 430064, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCGCR000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JBCGCR000000000.  This version of the project
            (01) has the accession number NZ_JBCGCR010000000, and consists of
            sequences JBCGCR010000001-JBCGCR010000012.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038440495.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:24:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,777
            CDSs (total)                      :: 1,731
            Genes (coding)                    :: 1,689
            CDSs (with protein)               :: 1,689
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 20 of 42
            Pseudo Genes (incomplete)         :: 20 of 42
            Pseudo Genes (internal stop)      :: 6 of 42
            Pseudo Genes (multiple problems)  :: 4 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1681306
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="XS14"
                     /host="laying hen"
                     /db_xref="taxon:195"
                     /geo_loc_name="China: Huanggang"
                     /collection_date="2022-06"
WGS         JBCGCR010000001-JBCGCR010000012
WGS_SCAFLD  NZ_JBCGCR010000001-NZ_JBCGCR010000012
//
LOCUS       NZ_JBCGCO010000000   1683891 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Campylobacter coli strain XS11, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCGCO000000000
VERSION     NZ_JBCGCO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34134767
            Assembly: GCF_038440535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1683891)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Genetic diversity and antibiotic resistance characteristics of
            Campylobacter in laying hen farms in Hubei province
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1683891)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2023) Hubei Provincial Key Laboratory of Animal
            Pathogenic Microbiology, Institute of Animal Husbandry and
            Veterinary, Hubei Academy of Agricultural Sciences, Nanhu Avenue,
            Wuhan, Hubei 430064, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCGCO000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JBCGCO000000000.  This version of the project
            (01) has the accession number NZ_JBCGCO010000000, and consists of
            sequences JBCGCO010000001-JBCGCO010000014.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038440535.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:26:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,779
            CDSs (total)                      :: 1,733
            Genes (coding)                    :: 1,694
            CDSs (with protein)               :: 1,694
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 18 of 39
            Pseudo Genes (incomplete)         :: 19 of 39
            Pseudo Genes (internal stop)      :: 5 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1683891
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="XS11"
                     /host="laying hen"
                     /db_xref="taxon:195"
                     /geo_loc_name="China: Huanggang"
                     /collection_date="2022-07"
WGS         JBCGCO010000001-JBCGCO010000014
WGS_SCAFLD  NZ_JBCGCO010000001-NZ_JBCGCO010000014
//
LOCUS       NZ_JBCGCN010000000   1681545 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Campylobacter coli strain XS10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCGCN000000000
VERSION     NZ_JBCGCN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34134766
            Assembly: GCF_038440555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1681545)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Genetic diversity and antibiotic resistance characteristics of
            Campylobacter in laying hen farms in Hubei province
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1681545)
  AUTHORS   Zhang,T., Chen,Y. and Xiao,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2023) Hubei Provincial Key Laboratory of Animal
            Pathogenic Microbiology, Institute of Animal Husbandry and
            Veterinary, Hubei Academy of Agricultural Sciences, Nanhu Avenue,
            Wuhan, Hubei 430064, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCGCN000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JBCGCN000000000.  This version of the project
            (01) has the accession number NZ_JBCGCN010000000, and consists of
            sequences JBCGCN010000001-JBCGCN010000012.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038440555.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:28:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,777
            CDSs (total)                      :: 1,731
            Genes (coding)                    :: 1,689
            CDSs (with protein)               :: 1,689
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 20 of 42
            Pseudo Genes (incomplete)         :: 20 of 42
            Pseudo Genes (internal stop)      :: 6 of 42
            Pseudo Genes (multiple problems)  :: 4 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1681545
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="XS10"
                     /host="laying hen"
                     /db_xref="taxon:195"
                     /geo_loc_name="China: Huanggang"
                     /collection_date="2022-07"
WGS         JBCGCN010000001-JBCGCN010000012
WGS_SCAFLD  NZ_JBCGCN010000001-NZ_JBCGCN010000012
//
LOCUS       NZ_JBSEHC010000000   5053906 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Candidatus Accumulibacter propinquus isolate MAG 12, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JBSEHC000000000
VERSION     NZ_JBSEHC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50655623
            Assembly: GCF_056856495.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Candidatus Accumulibacter propinquus (activated sludge metagenome)
  ORGANISM  Candidatus Accumulibacter propinquus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Candidatus Accumulibacter.
REFERENCE   1  (bases 1 to 5053906)
  AUTHORS   Deaver,J.A., Solon,T., Grunden,A.M. and Call,D.F.
  TITLE     Disruption in Gene Expression Cycles of Polyphosphate Accumulating
            Organisms is Associated with a Full-Scale Enhanced Biological
            Phosphorus Removal Instability Event
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5053906)
  AUTHORS   Deaver,J.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-SEP-2025) Civil, Construction, and Environmental
            Engineering, North Carolina State University, 915 Partners Way,
            Raleigh, NC 27606, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSEHC000000000.1.
            The Candidatus Accumulibacter propinquus whole genome shotgun (WGS)
            project has the project accession NZ_JBSEHC000000000.  This version
            of the project (01) has the accession number NZ_JBSEHC010000000,
            and consists of sequences JBSEHC010000001-JBSEHC010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.4
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 32x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856495.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 16:13:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,406
            CDSs (total)                      :: 4,347
            Genes (coding)                    :: 4,180
            CDSs (with protein)               :: 4,180
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 167
            CDSs (without protein)            :: 167
            Pseudo Genes (ambiguous residues) :: 0 of 167
            Pseudo Genes (frameshifted)       :: 72 of 167
            Pseudo Genes (incomplete)         :: 107 of 167
            Pseudo Genes (internal stop)      :: 14 of 167
            Pseudo Genes (multiple problems)  :: 24 of 167
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5053906
                     /organism="Candidatus Accumulibacter propinquus"
                     /mol_type="genomic DNA"
                     /isolate="MAG 12"
                     /isolation_source="activated sludge"
                     /db_xref="taxon:2954380"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /collection_date="2024-02-23"
                     /metagenome_source="activated sludge metagenome"
                     /metagenomic
WGS         JBSEHC010000001-JBSEHC010000007
WGS_SCAFLD  NZ_JBSEHC010000001-NZ_JBSEHC010000007
//
LOCUS       NZ_ADXP01000000      2533141 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Cutibacterium acnes HL043PA1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ADXP00000000
VERSION     NZ_ADXP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00189215
            Assembly: GCF_000145195.1
KEYWORDS    WGS; HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Cutibacterium acnes HL043PA1
  ORGANISM  Cutibacterium acnes HL043PA1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Propionibacteriaceae; Cutibacterium.
REFERENCE   1  (bases 1 to 2533141)
  AUTHORS   Weinstock,G., Sodergren,E., Clifton,S., Fulton,L., Fulton,B.,
            Courtney,L., Fronick,C., Harrison,M., Strong,C., Farmer,C.,
            Delahaunty,K., Markovic,C., Hall,O., Minx,P., Tomlinson,C.,
            Mitreva,M., Hou,S., Chen,J., Wollam,A., Pepin,K.H., Johnson,M.,
            Bhonagiri,V., Zhang,X., Suruliraj,S., Warren,W., Chinwalla,A.,
            Mardis,E.R. and Wilson,R.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2011) Genome Sequencing Center, Washington
            University School of Medicine, 4444 Forest Park, St. Louis, MO
            63108, USA
REFERENCE   2  (bases 1 to 2533141)
  AUTHORS   Weinstock,G., Sodergren,E., Clifton,S., Fulton,L., Fulton,B.,
            Courtney,L., Fronick,C., Harrison,M., Strong,C., Farmer,C.,
            Delahaunty,K., Markovic,C., Hall,O., Minx,P., Tomlinson,C.,
            Mitreva,M., Hou,S., Chen,J., Wollam,A., Pepin,K.H., Johnson,M.,
            Bhonagiri,V., Zhang,X., Suruliraj,S., Warren,W., Chinwalla,A.,
            Mardis,E.R. and Wilson,R.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JUL-2010) Genome Sequencing Center, Washington
            University School of Medicine, 4444 Forest Park, St. Louis, MO
            63108, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADXP00000000.1.
            The Cutibacterium acnes HL043PA1 whole genome shotgun (WGS) project
            has the project accession NZ_ADXP00000000.  This version of the
            project (01) has the accession number NZ_ADXP01000000, and consists
            of sequences ADXP01000001-ADXP01000034.
            Propionibacterium acnes HL043PA1 (No 16S rRNA gene available) is a
            member of the Actinobacteria division of the domain bacteria and
            has been isolated from the skin.
            
            This is a reference genome for the Human Microbiome Project. This
            project is co-owned with the Human Microbiome Project DACC.
            
            The bacterial isolate and source DNA was provided by Huiying Li,
            Ph.D. Department of Molecular and Medical Pharmacology, University
            of California, Los Angeles, 4339 CNSI, 570 Westwood Plaza, Building
            114, Los Angeles, CA 90095, USA. This project is funded by the
            following grant support: 'Metagenomic study of the human skin
            microbiome associated with acne' (1UH2AR057503).
            
            Coding sequences were predicted using GeneMark v3.3 and Glimmer2
            v2.13. Intergenic regions not spanned by GeneMark and Glimmer2 were
            blasted against NCBI's non-redundant (NR) database and predictions
            generated based on protein alignments. tRNA genes were determined
            using tRNAscan-SE 1.23 and non-coding RNA genes by RNAmmer-1.2 and
            Rfam v8.0. Gene names are generated at the contig level and may not
            necessarily reflect any known order or orientation between contigs.
            
            The National Human Genome Research Institute (NHGRI), National
            Institutes of Health (NIH) Acne Demonstration Project is funding
            the sequence characterization of the Propionibacterium acnes
            HL043PA1 genome.
            
            Annotation was added to the contigs in April 2011.
            Product names were updated in June 2013.
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: High-Quality Draft
            Current Finishing Status :: High-Quality Draft
            Assembly Method          :: Velvet v. 0.7.57
            Genome Coverage          :: 67.3x
            Sequencing Technology    :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000145195.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:36:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,513
            CDSs (total)                      :: 2,461
            Genes (coding)                    :: 2,393
            CDSs (with protein)               :: 2,393
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 29 of 68
            Pseudo Genes (incomplete)         :: 33 of 68
            Pseudo Genes (internal stop)      :: 16 of 68
            Pseudo Genes (multiple problems)  :: 8 of 68
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2533141
                     /organism="Cutibacterium acnes HL043PA1"
                     /mol_type="genomic DNA"
                     /strain="HL043PA1"
                     /isolation_source="biological product [ENVO:02000043]"
                     /host="Homo sapiens"
                     /db_xref="HMP:9570"
                     /db_xref="taxon:765072"
WGS         ADXP01000001-ADXP01000034
WGS_SCAFLD  NZ_GL384259-NZ_GL384286
//
LOCUS       NZ_JZEY01000000      3497719 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Devosia chinhatensis strain IPL18, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JZEY00000000
VERSION     NZ_JZEY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03383426
            Assembly: GCF_000969445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Devosia chinhatensis
  ORGANISM  Devosia chinhatensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3497719)
  AUTHORS   Hassan,Y.I., Lepp,D., Li,X.Z. and Zhou,T.
  TITLE     Insights into the Hydrocarbon Tolerance of Two Devosia Isolates, D.
            chinhatensis Strain IPL18T and D. geojensis Strain BD-c194T, via
            Whole-Genome Sequence Analysis
  JOURNAL   Genome Announc 3 (4), e00890-15 (2015)
   PUBMED   26251505
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3497719)
  AUTHORS   Hassan,Y., Lepp,D., Li,X.-Z. and Zhou,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2015) Guelph Food Research Centre, Agriculture
            and Agri-Food Canada, 93 Stone Road West, Guelph, ON N1G 5C9,
            Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JZEY00000000.1.
            The Devosia chinhatensis whole genome shotgun (WGS) project has the
            project accession NZ_JZEY00000000.  This version of the project
            (01) has the accession number NZ_JZEY01000000, and consists of
            sequences JZEY01000001-JZEY01000098.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 15-JAN-2015
            Assembly Method        :: SPAdes v. 3.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 255.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000969445.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:45:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,445
            CDSs (total)                      :: 3,387
            Genes (coding)                    :: 3,343
            CDSs (with protein)               :: 3,343
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 1 of 44
            Pseudo Genes (incomplete)         :: 40 of 44
            Pseudo Genes (internal stop)      :: 4 of 44
            Pseudo Genes (multiple problems)  :: 1 of 44
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3497719
                     /organism="Devosia chinhatensis"
                     /mol_type="genomic DNA"
                     /strain="IPL18"
                     /isolation_source="Hexachlorocyclhexan (HCH) dump site"
                     /culture_collection="DSM:24953"
                     /type_material="type strain of Devosia chinhatensis"
                     /db_xref="taxon:429727"
                     /geo_loc_name="India: Lucknow"
                     /collection_date="2008"
WGS         JZEY01000001-JZEY01000098
WGS_SCAFLD  NZ_JZEY01000001-NZ_JZEY01000098
//
LOCUS       NZ_LAJG01000000      4136371 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Devosia soli strain GH2-10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_LAJG00000000
VERSION     NZ_LAJG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03431281
            Assembly: GCF_000970455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Devosia soli
  ORGANISM  Devosia soli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4136371)
  AUTHORS   Hassan,Y.I., Lepp,D. and Zhou,T.
  TITLE     Genome Assemblies of Three Soil-Associated Devosia species: D.
            insulae, D. limi, and D. soli
  JOURNAL   Genome Announc 3 (3), e00514-15 (2015)
   PUBMED   25999556
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4136371)
  AUTHORS   Hassan,Y.I., Lepp,D. and Zhou,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAR-2015) Guelph Food Research Centre, Agriculture
            and Agri-Food Canada, 93 Stone Road West, Guelph, ON N1G 5C9,
            Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LAJG00000000.1.
            The Devosia soli whole genome shotgun (WGS) project has the project
            accession NZ_LAJG00000000.  This version of the project (01) has
            the accession number NZ_LAJG01000000, and consists of sequences
            LAJG01000001-LAJG01000048.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 15-MAR-2015
            Assembly Method        :: SPAdes v. 3.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 70.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000970455.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:46:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,100
            CDSs (total)                      :: 4,045
            Genes (coding)                    :: 3,989
            CDSs (with protein)               :: 3,989
            Genes (RNA)                       :: 55
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 17 of 56
            Pseudo Genes (incomplete)         :: 40 of 56
            Pseudo Genes (internal stop)      :: 6 of 56
            Pseudo Genes (multiple problems)  :: 7 of 56
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4136371
                     /organism="Devosia soli"
                     /mol_type="genomic DNA"
                     /strain="GH2-10"
                     /isolation_source="Greenhouse soil"
                     /type_material="type strain of Devosia soli"
                     /db_xref="taxon:361041"
                     /geo_loc_name="South Korea: Daejeon City"
                     /collection_date="2006"
WGS         LAJG01000001-LAJG01000048
WGS_SCAFLD  NZ_LAJG01000001-NZ_LAJG01000048
//
LOCUS       NZ_AJAJ01000000      2845164 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium ATCC 8459 = NRRL B-2354 strain ATCC 8459,
            whole genome shotgun sequencing project.
ACCESSION   NZ_AJAJ00000000
VERSION     NZ_AJAJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00809109
            Assembly: GCF_000393855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium ATCC 8459 = NRRL B-2354
  ORGANISM  Enterococcus faecium ATCC 8459 = NRRL B-2354
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2845164)
  AUTHORS   Earl,A.M., Gilmore,M.S., Lebreton,F., Walker,B., Young,S.K.,
            Zeng,Q., Gargeya,S., Fitzgerald,M., Haas,B., Abouelleil,A.,
            Alvarado,L., Arachchi,H.M., Berlin,A.M., Chapman,S.B., Dewar,J.,
            Goldberg,J., Griggs,A., Gujja,S., Hansen,M., Howarth,C.,
            Imamovic,A., Larimer,J., McCowan,C., Murphy,C., Neiman,D.,
            Pearson,M., Priest,M., Roberts,A., Saif,S., Shea,T., Sisk,P.,
            Sykes,S., Wortman,J., Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genome Sequencing Platform, The Broad Institute
            Genome Sequencing Center for Infectious Disease
  TITLE     The Genome Sequence of Enterococcus faecium ATCC_8459
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2845164)
  AUTHORS   Earl,A.M., Gilmore,M.S., Lebreton,F., Walker,B., Young,S.K.,
            Zeng,Q., Gargeya,S., Fitzgerald,M., Haas,B., Abouelleil,A.,
            Alvarado,L., Arachchi,H.M., Berlin,A.M., Chapman,S.B., Dewar,J.,
            Goldberg,J., Griggs,A., Gujja,S., Hansen,M., Howarth,C.,
            Imamovic,A., Larimer,J., McCowan,C., Murphy,C., Neiman,D.,
            Pearson,M., Priest,M., Roberts,A., Saif,S., Shea,T., Sisk,P.,
            Sykes,S., Wortman,J., Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genome Sequencing Platform, The Broad Institute
            Genome Sequencing Center for Infectious Disease
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2013) Broad Institute of MIT and Harvard, 7
            Cambridge Center, Cambridge, MA 02142, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AJAJ00000000.1.
            The Enterococcus faecium ATCC 8459 = NRRL B-2354 whole genome
            shotgun (WGS) project has the project accession NZ_AJAJ00000000.
            This version of the project (01) has the accession number
            NZ_AJAJ01000000, and consists of sequences
            AJAJ01000001-AJAJ01000026.
            Please be aware that the annotation is done automatically with
            little or no manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: allpaths v. R41985
            Assembly Name         :: Ente_faec_ATCC8459_V1
            Genome Coverage       :: 135.0x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000393855.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:34:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,802
            CDSs (total)                      :: 2,714
            Genes (coding)                    :: 2,616
            CDSs (with protein)               :: 2,616
            Genes (RNA)                       :: 88
            rRNAs                             :: 7, 5, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 5, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 66
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 98
            CDSs (without protein)            :: 98
            Pseudo Genes (ambiguous residues) :: 0 of 98
            Pseudo Genes (frameshifted)       :: 33 of 98
            Pseudo Genes (incomplete)         :: 48 of 98
            Pseudo Genes (internal stop)      :: 31 of 98
            Pseudo Genes (multiple problems)  :: 12 of 98
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2845164
                     /organism="Enterococcus faecium ATCC 8459 = NRRL B-2354"
                     /mol_type="genomic DNA"
                     /strain="ATCC 8459"
                     /culture_collection="ATCC:8459"
                     /db_xref="taxon:1158600"
WGS         AJAJ01000001-AJAJ01000026
WGS_SCAFLD  NZ_KB946236-NZ_KB946244
//
LOCUS       NZ_JWBX01000000      4952683 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter asburiae strain 1135_ECLO, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JWBX00000000
VERSION     NZ_JWBX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03197089
            Assembly: GCF_001076295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter asburiae
  ORGANISM  Enterobacter asburiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 4952683)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4952683)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWBX00000000.1.
            The Enterobacter asburiae whole genome shotgun (WGS) project has
            the project accession NZ_JWBX00000000.  This version of the project
            (01) has the accession number NZ_JWBX01000000, and consists of
            sequences JWBX01000001-JWBX01000134.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            The organism was changed from 'Enterobacter cloacae' to
            'Enterobacter asburiae' in July 2016.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_001076295.1
            Current Name        :: Enterobacter asburiae
            Previous Name       :: Enterobacter cloacae
            Date Updated        :: 2016-07-12
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_001521715.1
            A1 Name             :: Enterobacter asburiae
            A1 ANI              :: 97.00598%
            A1 Query Coverage   :: 82%
            A1 Subject Coverage :: 84%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_000025565.1
            A2 Name             :: Enterobacter cloacae
            A2 ANI              :: 88.96139%
            A2 Query Coverage   :: 80%
            A2 Subject Coverage :: 71%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 8x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001076295.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:47:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,846
            CDSs (total)                      :: 4,800
            Genes (coding)                    :: 4,700
            CDSs (with protein)               :: 4,700
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 3 (16S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 32
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 27 of 100
            Pseudo Genes (incomplete)         :: 74 of 100
            Pseudo Genes (internal stop)      :: 13 of 100
            Pseudo Genes (multiple problems)  :: 12 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4952683
                     /organism="Enterobacter asburiae"
                     /mol_type="genomic DNA"
                     /strain="1135_ECLO"
                     /host="Homo sapiens"
                     /db_xref="taxon:61645"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JWBX01000001-JWBX01000134
WGS_SCAFLD  NZ_JWBX01000001-NZ_JWBX01000134
//
LOCUS       NZ_LAJF01000000      4474336 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Devosia limi DSM 17137, whole genome shotgun sequencing project.
ACCESSION   NZ_LAJF00000000
VERSION     NZ_LAJF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03431279
            Assembly: GCF_000970435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Devosia limi DSM 17137
  ORGANISM  Devosia limi DSM 17137
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4474336)
  AUTHORS   Hassan,Y.I., Lepp,D. and Zhou,T.
  TITLE     Genome Assemblies of Three Soil-Associated Devosia species: D.
            insulae, D. limi, and D. soli
  JOURNAL   Genome Announc 3 (3), e00514-15 (2015)
   PUBMED   25999556
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4474336)
  AUTHORS   Hassan,Y.I., Lepp,D. and Zhou,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAR-2015) Guelph Food Research Centre, Agriculture
            and Agri-Food Canada, 93 Stone Road West, Guelph, ON N1G 5C9,
            Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LAJF00000000.1.
            The Devosia limi DSM 17137 whole genome shotgun (WGS) project has
            the project accession NZ_LAJF00000000.  This version of the project
            (01) has the accession number NZ_LAJF01000000, and consists of
            sequences LAJF01000001-LAJF01000158.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 15-MAR-2015
            Assembly Method        :: SPAdes v. 3.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 185.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000970435.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:46:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,363
            CDSs (total)                      :: 4,308
            Genes (coding)                    :: 4,226
            CDSs (with protein)               :: 4,226
            Genes (RNA)                       :: 55
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 20 of 82
            Pseudo Genes (incomplete)         :: 72 of 82
            Pseudo Genes (internal stop)      :: 4 of 82
            Pseudo Genes (multiple problems)  :: 13 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4474336
                     /organism="Devosia limi DSM 17137"
                     /mol_type="genomic DNA"
                     /strain="DSM 17137"
                     /isolation_source="Nitrifying inoculum"
                     /culture_collection="DSM:17137"
                     /type_material="type strain of Devosia limi"
                     /db_xref="taxon:1121477"
                     /geo_loc_name="Belgium"
                     /collection_date="2005"
WGS         LAJF01000001-LAJF01000158
WGS_SCAFLD  NZ_LAJF01000001-NZ_LAJF01000158
//
LOCUS       NZ_ANID01000000      4809338 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter hormaechei YT3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ANID00000000
VERSION     NZ_ANID00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02469366
            Assembly: GCF_000328885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei YT3
  ORGANISM  Enterobacter hormaechei YT3
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 4809338)
  AUTHORS   Wei,Y.-F., Yang,Y., Zhou,L., Liu,Z., Wang,X.-Y., Yang,R., Su,Q.,
            Zhao,J., Zhou,Y., Yang,R. and Yang,J.
  TITLE     Production of rhamnolipid biosurfactant by Enterobacter hormaechei
            YT3
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4809338)
  AUTHORS   Wei,Y.-F., Yang,Y., Zhou,L., Liu,Z., Wang,X.-Y., Yang,R., Su,Q.,
            Zhao,J., Zhou,Y., Yang,R. and Yang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2012) Department Science and Technology, BGI
            Research Institution, Building No. 11, Beishan Industrial Zone,
            Yantian District, Shenzhen, Guangdong 518083, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ANID00000000.1.
            The Enterobacter hormaechei YT3 whole genome shotgun (WGS) project
            has the project accession NZ_ANID00000000.  This version of the
            project (01) has the accession number NZ_ANID01000000, and consists
            of sequences ANID01000001-ANID01000014.
            Bacteria and source DNA available from: Department Science and
            Technology, BGI Research Institution, Building No. 11, Beishan
            Industrial Zone, Yantian District, Shenzhen, Guangdong 518083,
            China.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 1.05
            Genome Coverage       :: 280.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000328885.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:39:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,614
            CDSs (total)                      :: 4,512
            Genes (coding)                    :: 4,466
            CDSs (with protein)               :: 4,466
            Genes (RNA)                       :: 102
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 18 of 46
            Pseudo Genes (incomplete)         :: 30 of 46
            Pseudo Genes (internal stop)      :: 8 of 46
            Pseudo Genes (multiple problems)  :: 10 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4809338
                     /organism="Enterobacter hormaechei YT3"
                     /mol_type="genomic DNA"
                     /strain="YT3"
                     /isolation_source="feces"
                     /host="Zophobas atratus"
                     /db_xref="taxon:1260282"
                     /geo_loc_name="China"
                     /collection_date="2012-03"
WGS         ANID01000001-ANID01000014
WGS_SCAFLD  NZ_ANID01000003-NZ_ANID01000006
WGS_SCAFLD  NZ_ANID01000009-NZ_ANID01000014
WGS_SCAFLD  NZ_KB205937-NZ_KB205938
//
LOCUS       NZ_LEEA01000000      4970139 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter hormaechei subsp. steigerwaltii strain GN02382, whole
            genome shotgun sequencing project.
ACCESSION   NZ_LEEA00000000
VERSION     NZ_LEEA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03732702
            Assembly: GCF_001022365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei subsp. steigerwaltii
  ORGANISM  Enterobacter hormaechei subsp. steigerwaltii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 4970139)
  AUTHORS   Adams,M., Sutton,G., Nelson,K., Bonomo,R., McCorrison,J., Sanka,R.,
            Brinkac,L. and Nierman,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-JUN-2015) JCVI, 4120 Capricorn Lane, La Jolla, CA
            92037, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LEEA00000000.1.
            The Enterobacter hormaechei subsp. steigerwaltii whole genome
            shotgun (WGS) project has the project accession NZ_LEEA00000000.
            This version of the project (01) has the accession number
            NZ_LEEA01000000, and consists of sequences
            LEEA01000001-LEEA01000031.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            The organism was changed from 'Enterobacter cloacae' to
            'Enterobacter hormaechei subsp. steigerwaltii' in June 2016.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1.0
            Expected Final Version :: Yes
            Genome Coverage        :: 172.28x
            Sequencing Technology  :: Illumina NextSeq500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001022365.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:50:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,812
            CDSs (total)                      :: 4,741
            Genes (coding)                    :: 4,688
            CDSs (with protein)               :: 4,688
            Genes (RNA)                       :: 71
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 19 of 53
            Pseudo Genes (incomplete)         :: 34 of 53
            Pseudo Genes (internal stop)      :: 12 of 53
            Pseudo Genes (multiple problems)  :: 10 of 53
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4970139
                     /organism="Enterobacter hormaechei subsp. steigerwaltii"
                     /mol_type="genomic DNA"
                     /strain="GN02382"
                     /isolation_source="bodily fluid"
                     /host="Homo sapiens"
                     /sub_species="steigerwaltii"
                     /db_xref="taxon:299766"
                     /geo_loc_name="USA"
                     /lat_lon="36 N 78.9 W"
                     /collection_date="2005-07-01"
                     /collected_by="Vance Fowler"
WGS         LEEA01000001-LEEA01000031
WGS_SCAFLD  NZ_LEEA01000001-NZ_LEEA01000031
//
LOCUS       NZ_JOLW01000000      4661062 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Cronobacter sakazakii strain 696, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JOLW00000000
VERSION     NZ_JOLW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02840980
            Assembly: GCF_001309315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter sakazakii
  ORGANISM  Cronobacter sakazakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4661062)
  AUTHORS   Masood,N., Moore,K., Farbos,A., Paszkiewicz,K., Dickins,B.,
            McNally,A. and Forsythe,S.
  TITLE     Genomic dissection of the 1994 Cronobacter sakazakii outbreak in a
            French neonatal intensive care unit
  JOURNAL   BMC Genomics 16, 750 (2015)
   PUBMED   26438044
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4661062)
  AUTHORS   Masood,N., Moore,K., Farbos,A., Paszkieswicz,K., Dickins,B.,
            McNally,A. and Forsythe,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-JUN-2014) School of Science and Technology,
            Nottingham Trent University, Clifton Lane, Nottingham,
            Nottinghamshire NG11 8NS, UK
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JOLW00000000.1.
            The Cronobacter sakazakii whole genome shotgun (WGS) project has
            the project accession NZ_JOLW00000000.  This version of the project
            (01) has the accession number NZ_JOLW01000000, and consists of
            sequences JOLW01000001-JOLW01000077.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.09
            Genome Coverage       :: 15.0x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001309315.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:54:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,519
            CDSs (total)                      :: 4,402
            Genes (coding)                    :: 4,322
            CDSs (with protein)               :: 4,322
            Genes (RNA)                       :: 117
            rRNAs                             :: 10, 5, 14 (5S, 16S, 23S)
            complete rRNAs                    :: 10 (5S)
            partial rRNAs                     :: 5, 14 (16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 24 of 80
            Pseudo Genes (incomplete)         :: 50 of 80
            Pseudo Genes (internal stop)      :: 16 of 80
            Pseudo Genes (multiple problems)  :: 9 of 80
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4661062
                     /organism="Cronobacter sakazakii"
                     /mol_type="genomic DNA"
                     /strain="696"
                     /isolation_source="feces from infant with NECII"
                     /host="Homo sapiens"
                     /db_xref="taxon:28141"
                     /geo_loc_name="France"
                     /collection_date="1994"
                     /note="multilocus sequence type 12"
WGS         JOLW01000001-JOLW01000077
WGS_SCAFLD  NZ_JOLW01000001-NZ_JOLW01000077
//
LOCUS       NZ_AYJA01000000      5071843 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter roggenkampii MGH 34, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AYJA00000000
VERSION     NZ_AYJA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02138574
            Assembly: GCF_000492895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter roggenkampii MGH 34
  ORGANISM  Enterobacter roggenkampii MGH 34
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 5071843)
  AUTHORS   Murphy,C., Cosimi,L., Cerqueira,G., Feldgarden,M., Earl,A.M.,
            Hung,D., Onderdonk,A.B., Kirby,J.E., Ferraro,M.J., Hopper,D.,
            Dekker,J.P., O'Brien,T., Huang,S., Quan,V., Ernst,C., Delaney,M.,
            DuBois,A., Kim,D.S., Young,S., Zeng,Q., Gargeya,S., Abouelleil,A.,
            Alvarado,L., Chapman,S.B., Gainer-Dewar,J., Goldberg,J., Griggs,A.,
            Gujja,S., Hansen,M., Howarth,C., Imamovic,A., Larimer,J.,
            Pearson,M., Poon,T.W., Priest,M., Roberts,A., Saif,S., Shea,T.D.,
            Sykes,S.N., Wortman,J.R., Nusbaum,C. and Birren,B.W.
  CONSRTM   The Broad Institute Genomics Platform, The Broad Institute Genome
            Sequencing Center for Infectious Disease
  TITLE     The Genome Sequence of Enterobacter cloacae complex MGH 34
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5071843)
  AUTHORS   Murphy,C., Cosimi,L., Cerqueira,G., Feldgarden,M., Earl,A.M.,
            Hung,D., Onderdonk,A.B., Kirby,J.E., Ferraro,M.J., Hopper,D.,
            Dekker,J.P., O'Brien,T., Huang,S., Quan,V., Ernst,C., Delaney,M.,
            DuBois,A., Kim,D.S., Young,S., Zeng,Q., Gargeya,S., Abouelleil,A.,
            Alvarado,L., Chapman,S.B., Gainer-Dewar,J., Goldberg,J., Griggs,A.,
            Gujja,S., Hansen,M., Howarth,C., Imamovic,A., Larimer,J.,
            Pearson,M., Poon,T.W., Priest,M., Roberts,A., Saif,S., Shea,T.D.,
            Sykes,S.N., Wortman,J.R., Nusbaum,C. and Birren,B.W.
  CONSRTM   The Broad Institute Genomics Platform, The Broad Institute Genome
            Sequencing Center for Infectious Disease
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2013) Broad Institute of MIT and Harvard, 7
            Cambridge Center, Cambridge, MA 02142, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AYJA00000000.1.
            The Enterobacter roggenkampii MGH 34 whole genome shotgun (WGS)
            project has the project accession NZ_AYJA00000000.  This version of
            the project (01) has the accession number NZ_AYJA01000000, and
            consists of sequences AYJA01000001-AYJA01000008.
            Please be aware that the annotation is done automatically with
            little or no manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: allpaths v. R47032
            Assembly Name         :: Ente_cloa_complex_MGH_34_V1
            Genome Coverage       :: 145.0x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000492895.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:54:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,882
            CDSs (total)                      :: 4,779
            Genes (coding)                    :: 4,681
            CDSs (with protein)               :: 4,681
            Genes (RNA)                       :: 103
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 98
            CDSs (without protein)            :: 98
            Pseudo Genes (ambiguous residues) :: 0 of 98
            Pseudo Genes (frameshifted)       :: 31 of 98
            Pseudo Genes (incomplete)         :: 74 of 98
            Pseudo Genes (internal stop)      :: 13 of 98
            Pseudo Genes (multiple problems)  :: 17 of 98
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5071843
                     /organism="Enterobacter roggenkampii MGH 34"
                     /mol_type="genomic DNA"
                     /strain="MGH 34"
                     /isolation_source="urine"
                     /db_xref="taxon:1329832"
WGS         AYJA01000001-AYJA01000008
WGS_SCAFLD  NZ_KI535616-NZ_KI535618
//
LOCUS       NZ_JVPP01000000      4935350 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter bugandensis strain 217_ECLO, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JVPP00000000
VERSION     NZ_JVPP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03197409
            Assembly: GCF_001054625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter bugandensis
  ORGANISM  Enterobacter bugandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter.
REFERENCE   1  (bases 1 to 4935350)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4935350)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JVPP00000000.1.
            The Enterobacter bugandensis whole genome shotgun (WGS) project has
            the project accession NZ_JVPP00000000.  This version of the project
            (01) has the accession number NZ_JVPP01000000, and consists of
            sequences JVPP01000001-JVPP01000305.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            The organism was changed from 'Enterobacter cloacae' to
            'Enterobacter bugandensis' in January 2019.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_001054625.1
            Current Name        :: Enterobacter bugandensis
            Previous Name       :: Enterobacter cloacae
            Date Updated        :: 2019-01-07
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_900324475.1
            A1 Name             :: Enterobacter bugandensis
            A1 ANI              :: 98.74563%
            A1 Query Coverage   :: 89.12%
            A1 Subject Coverage :: 93.23%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_001299075.1
            A2 Name             :: Enterobacter cloacae
            A2 ANI              :: 88.61865%
            A2 Query Coverage   :: 80.32%
            A2 Subject Coverage :: 72.69%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 19x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001054625.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:56:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,877
            CDSs (total)                      :: 4,842
            Genes (coding)                    :: 4,678
            CDSs (with protein)               :: 4,678
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 28
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 164
            CDSs (without protein)            :: 164
            Pseudo Genes (ambiguous residues) :: 0 of 164
            Pseudo Genes (frameshifted)       :: 49 of 164
            Pseudo Genes (incomplete)         :: 121 of 164
            Pseudo Genes (internal stop)      :: 32 of 164
            Pseudo Genes (multiple problems)  :: 31 of 164
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4935350
                     /organism="Enterobacter bugandensis"
                     /mol_type="genomic DNA"
                     /strain="217_ECLO"
                     /host="Homo sapiens"
                     /db_xref="taxon:881260"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JVPP01000001-JVPP01000305
WGS_SCAFLD  NZ_JVPP01000001-NZ_JVPP01000305
//
LOCUS       NZ_JOLY01000000      4616986 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Cronobacter sakazakii strain 703, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JOLY00000000
VERSION     NZ_JOLY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02840983
            Assembly: GCF_001309375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter sakazakii
  ORGANISM  Cronobacter sakazakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4616986)
  AUTHORS   Masood,N., Moore,K., Farbos,A., Paszkiewicz,K., Dickins,B.,
            McNally,A. and Forsythe,S.
  TITLE     Genomic dissection of the 1994 Cronobacter sakazakii outbreak in a
            French neonatal intensive care unit
  JOURNAL   BMC Genomics 16, 750 (2015)
   PUBMED   26438044
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4616986)
  AUTHORS   Masood,N., Moore,K., Farbos,A., Paszkieswicz,K., Dickins,B.,
            McNally,A. and Forsythe,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-JUN-2014) School of Science and Technology,
            Nottingham Trent University, Clifton Lane, Nottingham,
            Nottinghamshire NG11 8NS, UK
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JOLY00000000.1.
            The Cronobacter sakazakii whole genome shotgun (WGS) project has
            the project accession NZ_JOLY00000000.  This version of the project
            (01) has the accession number NZ_JOLY01000000, and consists of
            sequences JOLY01000001-JOLY01000080.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.09
            Genome Coverage       :: 12.0x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001309375.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:55:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,439
            CDSs (total)                      :: 4,319
            Genes (coding)                    :: 4,234
            CDSs (with protein)               :: 4,234
            Genes (RNA)                       :: 120
            rRNAs                             :: 10, 5, 14 (5S, 16S, 23S)
            complete rRNAs                    :: 10 (5S)
            partial rRNAs                     :: 5, 14 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 85
            CDSs (without protein)            :: 85
            Pseudo Genes (ambiguous residues) :: 0 of 85
            Pseudo Genes (frameshifted)       :: 27 of 85
            Pseudo Genes (incomplete)         :: 49 of 85
            Pseudo Genes (internal stop)      :: 18 of 85
            Pseudo Genes (multiple problems)  :: 8 of 85
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4616986
                     /organism="Cronobacter sakazakii"
                     /mol_type="genomic DNA"
                     /strain="703"
                     /isolation_source="throat from infant wth NECII"
                     /host="Homo sapiens"
                     /db_xref="taxon:28141"
                     /geo_loc_name="France"
                     /collection_date="1994"
                     /note="multilocus sequence type 12"
WGS         JOLY01000001-JOLY01000080
WGS_SCAFLD  NZ_JOLY01000001-NZ_JOLY01000080
//
LOCUS       NZ_FMWG01000000      3994069 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Epibacterium ulvae strain U95, whole genome shotgun sequencing
            project.
ACCESSION   NZ_FMWG00000000
VERSION     NZ_FMWG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04488118
            Assembly: GCF_900102795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Epibacterium ulvae
  ORGANISM  Epibacterium ulvae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Epibacterium.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FMWG00000000.1.
            The Epibacterium ulvae whole genome shotgun (WGS) project has the
            project accession NZ_FMWG00000000.  This version of the project
            (01) has the accession number NZ_FMWG01000000, and consists of
            sequences FMWG01000001-FMWG01000030.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900102795.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:57:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,885
            CDSs (total)                      :: 3,831
            Genes (coding)                    :: 3,768
            CDSs (with protein)               :: 3,768
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 32 of 63
            Pseudo Genes (incomplete)         :: 50 of 63
            Pseudo Genes (internal stop)      :: 21 of 63
            Pseudo Genes (multiple problems)  :: 31 of 63
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3994069
                     /organism="Epibacterium ulvae"
                     /mol_type="genomic DNA"
                     /strain="U95"
                     /type_material="type strain of Epibacterium ulvae"
                     /db_xref="taxon:1156985"
                     /lat_lon="33.850798 S 151.265985 E"
WGS         FMWG01000001-FMWG01000030
WGS_SCAFLD  NZ_FMWG01000001-NZ_FMWG01000030
//
LOCUS       NZ_FJZT01000000      4799038 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter hormaechei strain e1605, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FJZT00000000
VERSION     NZ_FJZT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2273388
            Assembly: GCF_900075945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1
  CONSRTM   Pathogen Informatics
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAR-2016) WTSI, Pathogen Informatics, Wellcome Trust
            Sanger Institute, CB10 1SA, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FJZT00000000.1.
            The Enterobacter hormaechei whole genome shotgun (WGS) project has
            the project accession NZ_FJZT00000000.  This version of the project
            (01) has the accession number NZ_FJZT01000000, and consists of
            sequences FJZT01000001-FJZT01000025.
            The organism was changed from 'Enterobacter cloacae' to
            'Enterobacter hormaechei' in April  2020.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_900075945.1
            Current Name        :: Enterobacter hormaechei
            Previous Name       :: Enterobacter cloacae
            Date Updated        :: 2020-04-20
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_001729725.1
            A1 Name             :: Enterobacter hormaechei
            A1 ANI              :: 98.98%
            A1 Query Coverage   :: 90.61%
            A1 Subject Coverage :: 90.92%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_001299075.1
            A2 Name             :: Enterobacter cloacae
            A2 ANI              :: 87.51%
            A2 Query Coverage   :: 81.16%
            A2 Subject Coverage :: 71.42%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900075945.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:01:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,666
            CDSs (total)                      :: 4,582
            Genes (coding)                    :: 4,520
            CDSs (with protein)               :: 4,520
            Genes (RNA)                       :: 84
            rRNAs                             :: 6, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 2 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 20 of 62
            Pseudo Genes (incomplete)         :: 34 of 62
            Pseudo Genes (internal stop)      :: 15 of 62
            Pseudo Genes (multiple problems)  :: 5 of 62
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4799038
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="e1605"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:158836"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2007"
WGS         FJZT01000001-FJZT01000025
WGS_SCAFLD  NZ_FJZT01000001-NZ_FJZT01000025
//
LOCUS       NZ_JUZN01000000      4794282 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter bugandensis strain 627_ECLO, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JUZN00000000
VERSION     NZ_JUZN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03197827
            Assembly: GCF_001055515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter bugandensis
  ORGANISM  Enterobacter bugandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter.
REFERENCE   1  (bases 1 to 4794282)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4794282)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JUZN00000000.1.
            The Enterobacter bugandensis whole genome shotgun (WGS) project has
            the project accession NZ_JUZN00000000.  This version of the project
            (01) has the accession number NZ_JUZN01000000, and consists of
            sequences JUZN01000001-JUZN01000169.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            The organism was changed from 'Enterobacter cloacae' to
            'Enterobacter bugandensis' in January 2019.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_001055515.1
            Current Name        :: Enterobacter bugandensis
            Previous Name       :: Enterobacter cloacae
            Date Updated        :: 2019-01-07
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_900324475.1
            A1 Name             :: Enterobacter bugandensis
            A1 ANI              :: 98.68804%
            A1 Query Coverage   :: 91.04%
            A1 Subject Coverage :: 92.52%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_001997105.1
            A2 Name             :: Enterobacter cloacae
            A2 ANI              :: 88.58876%
            A2 Query Coverage   :: 82.79%
            A2 Subject Coverage :: 72.74%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 29x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001055515.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:57:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,652
            CDSs (total)                      :: 4,616
            Genes (coding)                    :: 4,509
            CDSs (with protein)               :: 4,509
            Genes (RNA)                       :: 36
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 27
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 107
            CDSs (without protein)            :: 107
            Pseudo Genes (ambiguous residues) :: 0 of 107
            Pseudo Genes (frameshifted)       :: 24 of 107
            Pseudo Genes (incomplete)         :: 82 of 107
            Pseudo Genes (internal stop)      :: 21 of 107
            Pseudo Genes (multiple problems)  :: 17 of 107
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4794282
                     /organism="Enterobacter bugandensis"
                     /mol_type="genomic DNA"
                     /strain="627_ECLO"
                     /host="Homo sapiens"
                     /db_xref="taxon:881260"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JUZN01000001-JUZN01000169
WGS_SCAFLD  NZ_JUZN01000001-NZ_JUZN01000169
//
LOCUS       NZ_FJZX01000000      4917217 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter hormaechei strain e1632, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FJZX00000000
VERSION     NZ_FJZX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2273392
            Assembly: GCF_900075975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1
  CONSRTM   Pathogen Informatics
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAR-2016) WTSI, Pathogen Informatics, Wellcome Trust
            Sanger Institute, CB10 1SA, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FJZX00000000.1.
            The Enterobacter hormaechei whole genome shotgun (WGS) project has
            the project accession NZ_FJZX00000000.  This version of the project
            (01) has the accession number NZ_FJZX01000000, and consists of
            sequences FJZX01000001-FJZX01000020.
            The organism was changed from 'Enterobacter cloacae' to
            'Enterobacter hormaechei' in April  2020.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_900075975.1
            Current Name        :: Enterobacter hormaechei
            Previous Name       :: Enterobacter cloacae
            Date Updated        :: 2020-04-20
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_001729725.1
            A1 Name             :: Enterobacter hormaechei
            A1 ANI              :: 99.13%
            A1 Query Coverage   :: 88.42%
            A1 Subject Coverage :: 90.91%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_001299075.1
            A2 Name             :: Enterobacter cloacae
            A2 ANI              :: 87.37%
            A2 Query Coverage   :: 79.98%
            A2 Subject Coverage :: 72.12%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900075975.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:02:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,758
            CDSs (total)                      :: 4,673
            Genes (coding)                    :: 4,616
            CDSs (with protein)               :: 4,616
            Genes (RNA)                       :: 85
            rRNAs                             :: 7, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5 (5S)
            tRNAs                             :: 71
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 17 of 57
            Pseudo Genes (incomplete)         :: 43 of 57
            Pseudo Genes (internal stop)      :: 3 of 57
            Pseudo Genes (multiple problems)  :: 6 of 57
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4917217
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="e1632"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:158836"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2007"
WGS         FJZX01000001-FJZX01000020
WGS_SCAFLD  NZ_FJZX01000001-NZ_FJZX01000020
//
LOCUS       NZ_JYGA02000000      5134212 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter hormaechei strain MRSN 17626, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JYGA00000000
VERSION     NZ_JYGA00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03316841
            Assembly: GCF_000938355.2
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 5134212)
  AUTHORS   McGann,P., Snesrud,E., Ong,A.C., Clifford,R., Kwak,Y.I.,
            Steele,E.D., Rabinowitz,R., Waterman,P.E. and Lesho,E.
  TITLE     Allelic Variants of blaVIM Reside on Diverse Mobile Genetic
            Elements in Gram-negative Clinical Isolates from the USA
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5134212)
  AUTHORS   McGann,P., Snesrud,E., Ong,A.C., Clifford,R., Kwak,Y.I.,
            Steele,E.D., Rabinowitz,R., Waterman,P.E. and Lesho,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAR-2015) Multidrug Resistant Organism Repository and
            Surveillance Network, Walter Reed Army Institute of Research, 503
            Robert Grant Ave., Silver Spring, MD 20910, USA
REFERENCE   3  (bases 1 to 5134212)
  AUTHORS   McGann,P., Snesrud,E., Ong,A.C., Clifford,R., Kwak,Y.I.,
            Steele,E.D., Rabinowitz,R., Waterman,P.E. and Lesho,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-FEB-2015) Multidrug Resistant Organism Repository and
            Surveillance Network, Walter Reed Army Institute of Research, 503
            Robert Grant Ave., Silver Spring, MD 20910, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JYGA00000000.2.
            
            On May 7, 2015 this sequence version replaced NZ_JYGA00000000.1.
            The Enterobacter hormaechei whole genome shotgun (WGS) project has
            the project accession NZ_JYGA00000000.  This version of the project
            (02) has the accession number NZ_JYGA02000000, and consists of
            sequences JYGA02000001-JYGA02000007.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            The organism was changed from 'Enterobacter cloacae' to
            'Enterobacter hormaechei' in January 2019.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_000938355.2
            Current Name        :: Enterobacter hormaechei
            Previous Name       :: Enterobacter cloacae
            Date Updated        :: 2019-01-07
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_001729785.1
            A1 Name             :: Enterobacter hormaechei
            A1 ANI              :: 99.19573%
            A1 Query Coverage   :: 84.4%
            A1 Subject Coverage :: 92.95%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_000025565.1
            A2 Name             :: Enterobacter cloacae
            A2 ANI              :: 87.62192%
            A2 Query Coverage   :: 76.99%
            A2 Subject Coverage :: 70.6%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Newbler v. 2.7; HGAP v. 2.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150.0x
            Sequencing Technology  :: Illumina MiSeq; PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000938355.2-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:17:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,084
            CDSs (total)                      :: 4,965
            Genes (coding)                    :: 4,886
            CDSs (with protein)               :: 4,886
            Genes (RNA)                       :: 119
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 22 of 79
            Pseudo Genes (incomplete)         :: 60 of 79
            Pseudo Genes (internal stop)      :: 13 of 79
            Pseudo Genes (multiple problems)  :: 14 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5134212
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="MRSN 17626"
                     /isolation_source="Surveillance swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:158836"
                     /geo_loc_name="USA"
                     /collection_date="2013-07-23"
                     /collected_by="MRSN"
WGS         JYGA02000001-JYGA02000007
WGS_SCAFLD  NZ_JYGA02000001-NZ_JYGA02000007
//
LOCUS       NZ_LAJE02000000      5750119 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Devosia insulae DS-56, whole genome shotgun sequencing project.
ACCESSION   NZ_LAJE00000000
VERSION     NZ_LAJE00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03431276
            Assembly: GCF_000970465.2
KEYWORDS    WGS; RefSeq.
SOURCE      Devosia insulae DS-56
  ORGANISM  Devosia insulae DS-56
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5750119)
  AUTHORS   Hassan,Y.I., Lepp,D. and Zhou,T.
  TITLE     Genome Assemblies of Three Soil-Associated Devosia species: D.
            insulae, D. limi, and D. soli
  JOURNAL   Genome Announc 3 (3), e00514-15 (2015)
   PUBMED   25999556
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5750119)
  AUTHORS   Hassan,Y.I., Lepp,D. and Zhou,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2016) Guelph Food Research Centre, Agriculture
            and Agri-Food Canada, 93 Stone Road West, Guelph, ON N1G 5C9,
            Canada
REFERENCE   3  (bases 1 to 5750119)
  AUTHORS   Hassan,Y.I., Lepp,D. and Zhou,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAR-2015) Guelph Food Research Centre, Agriculture
            and Agri-Food Canada, 93 Stone Road West, Guelph, ON N1G 5C9,
            Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LAJE00000000.2.
            
            On Sep 30, 2016 this sequence version replaced NZ_LAJE00000000.1.
            The Devosia insulae DS-56 whole genome shotgun (WGS) project has
            the project accession NZ_LAJE00000000.  This version of the project
            (02) has the accession number NZ_LAJE02000000, and consists of
            sequences LAJE02000001-LAJE02000410.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from DSM.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-SEP-2016
            Assembly Method        :: SPAdes v. 3.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000970465.2-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:20:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,698
            CDSs (total)                      :: 5,644
            Genes (coding)                    :: 5,580
            CDSs (with protein)               :: 5,580
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 5 of 64
            Pseudo Genes (incomplete)         :: 56 of 64
            Pseudo Genes (internal stop)      :: 5 of 64
            Pseudo Genes (multiple problems)  :: 2 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5750119
                     /organism="Devosia insulae DS-56"
                     /mol_type="genomic DNA"
                     /strain="DS-56"
                     /isolation_source="soil"
                     /type_material="type strain of Devosia insulae"
                     /db_xref="taxon:1116389"
                     /geo_loc_name="South Korea: Dokdo Island, East Sea of
                     Korea"
                     /collection_date="2007"
WGS         LAJE02000001-LAJE02000410
WGS_SCAFLD  NZ_LAJE02000001-NZ_LAJE02000410
//
LOCUS       NZ_ABKX01000000      4698533 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia albertii TW07627, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ABKX00000000
VERSION     NZ_ABKX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02436276
            Assembly: GCF_000155105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia albertii TW07627
  ORGANISM  Escherichia albertii TW07627
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4698533)
  AUTHORS   Sutton,G., Whittam,T.S. and Sebastian,Y.
  TITLE     Annotation of Escherichia albertii TW07627
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4698533)
  AUTHORS   Sutton,G. and Whittam,T.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-FEB-2008) J. Craig Venter Institute, 9704 Medical
            Center Drive, Rockville, MD 20850, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ABKX00000000.1.
            The Escherichia albertii TW07627 whole genome shotgun (WGS) project
            has the project accession NZ_ABKX00000000.  This version of the
            project (01) has the accession number NZ_ABKX01000000, and consists
            of sequences ABKX01000001-ABKX01000064.
            DNA Source: STEC Center
            National Food Safety and Toxicology Center (NFSTC)
            Michigan State University (MSU)
            http://foodsafe.msu.edu/
            This version of the genome, JCVI-gea1-v1.0, represents roughly
            6.89x Sanger coverage and 23.37x 454 coverage of the genome.
            Annotation was added to the contigs in March 2008.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000155105.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:15:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,780
            CDSs (total)                      :: 4,677
            Genes (coding)                    :: 4,240
            CDSs (with protein)               :: 4,240
            Genes (RNA)                       :: 103
            rRNAs                             :: 9, 2, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 2, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 77
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 437
            CDSs (without protein)            :: 437
            Pseudo Genes (ambiguous residues) :: 0 of 437
            Pseudo Genes (frameshifted)       :: 126 of 437
            Pseudo Genes (incomplete)         :: 318 of 437
            Pseudo Genes (internal stop)      :: 78 of 437
            Pseudo Genes (multiple problems)  :: 70 of 437
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4698533
                     /organism="Escherichia albertii TW07627"
                     /mol_type="genomic DNA"
                     /strain="TW07627"
                     /db_xref="taxon:502347"
WGS         ABKX01000001-ABKX01000064
WGS_SCAFLD  NZ_CH991859-NZ_CH991901
//
LOCUS       NZ_FPCK01000000      3723990 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Devosia crocina strain IPL20, whole genome shotgun sequencing
            project.
ACCESSION   NZ_FPCK00000000
VERSION     NZ_FPCK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05216456
            Assembly: GCF_900116545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Devosia crocina
  ORGANISM  Devosia crocina
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Devosiaceae; Devosia.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FPCK00000000.1.
            The Devosia crocina whole genome shotgun (WGS) project has the
            project accession NZ_FPCK00000000.  This version of the project
            (01) has the accession number NZ_FPCK01000000, and consists of
            sequences FPCK01000001-FPCK01000006.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900116545.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:27:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,648
            CDSs (total)                      :: 3,598
            Genes (coding)                    :: 3,576
            CDSs (with protein)               :: 3,576
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 11 of 22
            Pseudo Genes (incomplete)         :: 12 of 22
            Pseudo Genes (internal stop)      :: 3 of 22
            Pseudo Genes (multiple problems)  :: 4 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3723990
                     /organism="Devosia crocina"
                     /mol_type="genomic DNA"
                     /strain="IPL20"
                     /type_material="type strain of Devosia crocina"
                     /db_xref="taxon:429728"
WGS         FPCK01000001-FPCK01000006
WGS_SCAFLD  NZ_FPCK01000001-NZ_FPCK01000006
//
LOCUS       NZ_FOMB01000000      4328275 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Devosia psychrophila strain CGMCC 1.10210, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOMB00000000
VERSION     NZ_FOMB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04488059
            Assembly: GCF_900112505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Devosia psychrophila
  ORGANISM  Devosia psychrophila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Devosiaceae; Devosia.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOMB00000000.1.
            The Devosia psychrophila whole genome shotgun (WGS) project has the
            project accession NZ_FOMB00000000.  This version of the project
            (01) has the accession number NZ_FOMB01000000, and consists of
            sequences FOMB01000001-FOMB01000085.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900112505.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:27:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,324
            CDSs (total)                      :: 4,272
            Genes (coding)                    :: 4,112
            CDSs (with protein)               :: 4,112
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 160
            CDSs (without protein)            :: 160
            Pseudo Genes (ambiguous residues) :: 0 of 160
            Pseudo Genes (frameshifted)       :: 72 of 160
            Pseudo Genes (incomplete)         :: 114 of 160
            Pseudo Genes (internal stop)      :: 19 of 160
            Pseudo Genes (multiple problems)  :: 40 of 160
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4328275
                     /organism="Devosia psychrophila"
                     /mol_type="genomic DNA"
                     /strain="CGMCC 1.10210"
                     /type_material="type strain of Devosia psychrophila"
                     /db_xref="taxon:728005"
                     /lat_lon="30.329215 N 119.435344 E"
WGS         FOMB01000001-FOMB01000085
WGS_SCAFLD  NZ_FOMB01000001-NZ_FOMB01000085
//
LOCUS       NZ_FOWR01000000      5444625 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterovibrio norvegicus DSM 15893, whole genome shotgun sequencing
            project.
ACCESSION   NZ_FOWR00000000
VERSION     NZ_FOWR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03084138
            Assembly: GCF_900115495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterovibrio norvegicus DSM 15893
  ORGANISM  Enterovibrio norvegicus DSM 15893
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Enterovibrio.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOWR00000000.1.
            The Enterovibrio norvegicus DSM 15893 whole genome shotgun (WGS)
            project has the project accession NZ_FOWR00000000.  This version of
            the project (01) has the accession number NZ_FOWR01000000, and
            consists of sequences FOWR01000001-FOWR01000099.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900115495.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:32:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,892
            CDSs (total)                      :: 4,813
            Genes (coding)                    :: 4,737
            CDSs (with protein)               :: 4,737
            Genes (RNA)                       :: 79
            rRNAs                             :: 4, 1 (5S, 16S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 11 of 76
            Pseudo Genes (incomplete)         :: 67 of 76
            Pseudo Genes (internal stop)      :: 3 of 76
            Pseudo Genes (multiple problems)  :: 5 of 76
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5444625
                     /organism="Enterovibrio norvegicus DSM 15893"
                     /mol_type="genomic DNA"
                     /strain="DSM 15893"
                     /type_material="type strain of Enterovibrio norvegicus"
                     /db_xref="taxon:1121869"
                     /geo_loc_name="Norway:Aquaculture Research Station of
                     Austevoll"
WGS         FOWR01000001-FOWR01000099
WGS_SCAFLD  NZ_FOWR01000001-NZ_FOWR01000099
//
LOCUS       NZ_LSVN01000000      2396017 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae bv. mitis strain 74, whole genome
            shotgun sequencing project.
ACCESSION   NZ_LSVN00000000
VERSION     NZ_LSVN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04496956
            Assembly: GCF_002202345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae bv. mitis
  ORGANISM  Corynebacterium diphtheriae bv. mitis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2396017)
  AUTHORS   Grosse-Kock,S., Kolodkina,V., Schwalbe,E.C., Blom,J., Burkovski,A.,
            Hoskisson,P.A., Brisse,S., Smith,D., Sutcliffe,I.C., Titov,L. and
            Sangal,V.
  TITLE     Genomic analysis of endemic clones of toxigenic and non-toxigenic
            Corynebacterium diphtheriae in Belarus during and after the major
            epidemic in 1990s
  JOURNAL   BMC Genomics 18 (1), 873 (2017)
   PUBMED   29132312
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2396017)
  AUTHORS   Sangal,V. and Titov,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-FEB-2016) Faculty of Health and Life Sciences,
            Northumbria University, Ellison Place, Newcastle upon Tyne NE1 8ST,
            United Kingdom (Great Britain)
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LSVN00000000.1.
            The Corynebacterium diphtheriae bv. mitis whole genome shotgun
            (WGS) project has the project accession NZ_LSVN00000000.  This
            version of the project (01) has the accession number
            NZ_LSVN01000000, and consists of sequences
            LSVN01000001-LSVN01000064.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1
            Assembly Name          :: S27
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 36.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002202345.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:32:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,286
            CDSs (total)                      :: 2,232
            Genes (coding)                    :: 2,160
            CDSs (with protein)               :: 2,160
            Genes (RNA)                       :: 54
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 72
            CDSs (without protein)            :: 72
            Pseudo Genes (ambiguous residues) :: 0 of 72
            Pseudo Genes (frameshifted)       :: 27 of 72
            Pseudo Genes (incomplete)         :: 53 of 72
            Pseudo Genes (internal stop)      :: 14 of 72
            Pseudo Genes (multiple problems)  :: 18 of 72
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2396017
                     /organism="Corynebacterium diphtheriae bv. mitis"
                     /mol_type="genomic DNA"
                     /strain="74"
                     /host="Homo sapiens"
                     /db_xref="taxon:1806053"
                     /geo_loc_name="Belarus: Mogilev"
                     /lat_lon="53.90 N 30.06 E"
                     /collection_date="1996"
                     /collected_by="L. Titov"
                     /biovar="mitis"
WGS         LSVN01000001-LSVN01000064
WGS_SCAFLD  NZ_LSVN01000001-NZ_LSVN01000064
//
LOCUS       NZ_LERV01000000      2974213 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain 86EA1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_LERV00000000
VERSION     NZ_LERV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02729134
            Assembly: GCF_003320775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2974213)
  AUTHORS   Earl,A.M., Van Tyne,D., Lebreton,F., Saavedra,J.T., Gilmore,M.S.,
            Manson McGuire,A., Clock,S., Crupain,M., Rangan,U., Young,S.,
            Abouelleil,A., Cao,P., Chapman,S.B., Griggs,A., Priest,M., Shea,T.,
            Wortman,J., Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genomics Platform, The Broad Institute Genome
            Sequencing Center for Infectious Disease
  TITLE     The Genome Sequence of Enterococcus faecium 86EA1
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2974213)
  AUTHORS   Earl,A.M., Van Tyne,D., Lebreton,F., Saavedra,J.T., Gilmore,M.S.,
            Manson McGuire,A., Clock,S., Crupain,M., Rangan,U., Young,S.,
            Abouelleil,A., Cao,P., Chapman,S.B., Griggs,A., Priest,M., Shea,T.,
            Wortman,J., Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genomics Platform, The Broad Institute Genome
            Sequencing Center for Infectious Disease
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2015) Broad Institute of MIT and Harvard, 7
            Cambridge Center, Cambridge, MA 02142, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LERV00000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_LERV00000000.  This version of the project
            (01) has the accession number NZ_LERV01000000, and consists of
            sequences LERV01000001-LERV01000026.
            Please be aware that the annotation is done automatically with
            little or no manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: allpaths v. R48559
            Genome Coverage       :: 130.0x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003320775.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:52:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,804
            Genes (coding)                    :: 2,711
            CDSs (with protein)               :: 2,711
            Genes (RNA)                       :: 94
            rRNAs                             :: 7, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 4, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 93
            CDSs (without protein)            :: 93
            Pseudo Genes (ambiguous residues) :: 0 of 93
            Pseudo Genes (frameshifted)       :: 17 of 93
            Pseudo Genes (incomplete)         :: 78 of 93
            Pseudo Genes (internal stop)      :: 14 of 93
            Pseudo Genes (multiple problems)  :: 13 of 93
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2974213
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="86EA1"
                     /isolation_source="Breast meat"
                     /host="Gallus gallus domesticus"
                     /db_xref="taxon:1352"
                     /geo_loc_name="USA: Tampa, FL"
WGS         LERV01000001-LERV01000026
WGS_SCAFLD  NZ_KZ846517-NZ_KZ846531
//
LOCUS       NZ_LSWJ01000000      2449230 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae bv. mitis strain 987, whole genome
            shotgun sequencing project.
ACCESSION   NZ_LSWJ00000000
VERSION     NZ_LSWJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04496983
            Assembly: GCF_002202665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae bv. mitis
  ORGANISM  Corynebacterium diphtheriae bv. mitis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2449230)
  AUTHORS   Grosse-Kock,S., Kolodkina,V., Schwalbe,E.C., Blom,J., Burkovski,A.,
            Hoskisson,P.A., Brisse,S., Smith,D., Sutcliffe,I.C., Titov,L. and
            Sangal,V.
  TITLE     Genomic analysis of endemic clones of toxigenic and non-toxigenic
            Corynebacterium diphtheriae in Belarus during and after the major
            epidemic in 1990s
  JOURNAL   BMC Genomics 18 (1), 873 (2017)
   PUBMED   29132312
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2449230)
  AUTHORS   Sangal,V. and Titov,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-FEB-2016) Faculty of Health and Life Sciences,
            Northumbria University, Ellison Place, Newcastle upon Tyne NE1 8ST,
            United Kingdom (Great Britain)
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LSWJ00000000.1.
            The Corynebacterium diphtheriae bv. mitis whole genome shotgun
            (WGS) project has the project accession NZ_LSWJ00000000.  This
            version of the project (01) has the accession number
            NZ_LSWJ01000000, and consists of sequences
            LSWJ01000001-LSWJ01000047.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7.5
            Assembly Name          :: S67
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 365.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002202665.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:39:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,374
            CDSs (total)                      :: 2,316
            Genes (coding)                    :: 2,242
            CDSs (with protein)               :: 2,242
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 29 of 74
            Pseudo Genes (incomplete)         :: 53 of 74
            Pseudo Genes (internal stop)      :: 14 of 74
            Pseudo Genes (multiple problems)  :: 18 of 74
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2449230
                     /organism="Corynebacterium diphtheriae bv. mitis"
                     /mol_type="genomic DNA"
                     /strain="987"
                     /host="Homo sapiens"
                     /db_xref="taxon:1806053"
                     /geo_loc_name="Belarus: Gomel"
                     /lat_lon="52.44 N 30.98 E"
                     /collection_date="1998"
                     /collected_by="L. Titov"
                     /biovar="mitis"
WGS         LSWJ01000001-LSWJ01000047
WGS_SCAFLD  NZ_LSWJ01000001-NZ_LSWJ01000047
//
LOCUS       NZ_LSWK01000000      2405652 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae bv. gravis strain 1054, whole genome
            shotgun sequencing project.
ACCESSION   NZ_LSWK00000000
VERSION     NZ_LSWK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04496982
            Assembly: GCF_002202685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae bv. gravis
  ORGANISM  Corynebacterium diphtheriae bv. gravis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2405652)
  AUTHORS   Grosse-Kock,S., Kolodkina,V., Schwalbe,E.C., Blom,J., Burkovski,A.,
            Hoskisson,P.A., Brisse,S., Smith,D., Sutcliffe,I.C., Titov,L. and
            Sangal,V.
  TITLE     Genomic analysis of endemic clones of toxigenic and non-toxigenic
            Corynebacterium diphtheriae in Belarus during and after the major
            epidemic in 1990s
  JOURNAL   BMC Genomics 18 (1), 873 (2017)
   PUBMED   29132312
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2405652)
  AUTHORS   Sangal,V. and Titov,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-FEB-2016) Faculty of Health and Life Sciences,
            Northumbria University, Ellison Place, Newcastle upon Tyne NE1 8ST,
            United Kingdom (Great Britain)
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LSWK00000000.1.
            The Corynebacterium diphtheriae bv. gravis whole genome shotgun
            (WGS) project has the project accession NZ_LSWK00000000.  This
            version of the project (01) has the accession number
            NZ_LSWK01000000, and consists of sequences
            LSWK01000001-LSWK01000054.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7.5
            Assembly Name          :: S68
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 448.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002202685.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:33:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,303
            CDSs (total)                      :: 2,244
            Genes (coding)                    :: 2,172
            CDSs (with protein)               :: 2,172
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 72
            CDSs (without protein)            :: 72
            Pseudo Genes (ambiguous residues) :: 0 of 72
            Pseudo Genes (frameshifted)       :: 33 of 72
            Pseudo Genes (incomplete)         :: 52 of 72
            Pseudo Genes (internal stop)      :: 10 of 72
            Pseudo Genes (multiple problems)  :: 19 of 72
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2405652
                     /organism="Corynebacterium diphtheriae bv. gravis"
                     /mol_type="genomic DNA"
                     /strain="1054"
                     /host="Homo sapiens"
                     /db_xref="taxon:1720349"
                     /geo_loc_name="Belarus: Gomel"
                     /lat_lon="52.44 N 30.98 E"
                     /collection_date="1998"
                     /collected_by="L. Titov"
                     /biovar="gravis"
WGS         LSWK01000001-LSWK01000054
WGS_SCAFLD  NZ_LSWK01000001-NZ_LSWK01000054
//
LOCUS       NZ_LSWW01000000      2445980 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae bv. mitis strain 5201, whole genome
            shotgun sequencing project.
ACCESSION   NZ_LSWW00000000
VERSION     NZ_LSWW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04497026
            Assembly: GCF_002203595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae bv. mitis
  ORGANISM  Corynebacterium diphtheriae bv. mitis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2445980)
  AUTHORS   Grosse-Kock,S., Kolodkina,V., Schwalbe,E.C., Blom,J., Burkovski,A.,
            Hoskisson,P.A., Brisse,S., Smith,D., Sutcliffe,I.C., Titov,L. and
            Sangal,V.
  TITLE     Genomic analysis of endemic clones of toxigenic and non-toxigenic
            Corynebacterium diphtheriae in Belarus during and after the major
            epidemic in 1990s
  JOURNAL   BMC Genomics 18 (1), 873 (2017)
   PUBMED   29132312
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2445980)
  AUTHORS   Sangal,V. and Titov,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-FEB-2016) Faculty of Health and Life Sciences,
            Northumbria University, Ellison Place, Newcastle upon Tyne NE1 8ST,
            United Kingdom (Great Britain)
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LSWW00000000.1.
            The Corynebacterium diphtheriae bv. mitis whole genome shotgun
            (WGS) project has the project accession NZ_LSWW00000000.  This
            version of the project (01) has the accession number
            NZ_LSWW01000000, and consists of sequences
            LSWW01000001-LSWW01000044.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1
            Assembly Name          :: S81
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 42.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002203595.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:35:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,366
            CDSs (total)                      :: 2,304
            Genes (coding)                    :: 2,232
            CDSs (with protein)               :: 2,232
            Genes (RNA)                       :: 62
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 72
            CDSs (without protein)            :: 72
            Pseudo Genes (ambiguous residues) :: 0 of 72
            Pseudo Genes (frameshifted)       :: 32 of 72
            Pseudo Genes (incomplete)         :: 50 of 72
            Pseudo Genes (internal stop)      :: 14 of 72
            Pseudo Genes (multiple problems)  :: 20 of 72
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2445980
                     /organism="Corynebacterium diphtheriae bv. mitis"
                     /mol_type="genomic DNA"
                     /strain="5201"
                     /host="Homo sapiens"
                     /db_xref="taxon:1806053"
                     /geo_loc_name="Belarus: Minsk"
                     /lat_lon="53.90 N 27.56 E"
                     /collection_date="2014"
                     /collected_by="L. Titov"
                     /biovar="mitis"
WGS         LSWW01000001-LSWW01000044
WGS_SCAFLD  NZ_LSWW01000001-NZ_LSWW01000044
//
LOCUS       NZ_LSWO01000000      2407572 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae bv. gravis strain 4994, whole genome
            shotgun sequencing project.
ACCESSION   NZ_LSWO00000000
VERSION     NZ_LSWO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04497013
            Assembly: GCF_002202735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae bv. gravis
  ORGANISM  Corynebacterium diphtheriae bv. gravis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2407572)
  AUTHORS   Grosse-Kock,S., Kolodkina,V., Schwalbe,E.C., Blom,J., Burkovski,A.,
            Hoskisson,P.A., Brisse,S., Smith,D., Sutcliffe,I.C., Titov,L. and
            Sangal,V.
  TITLE     Genomic analysis of endemic clones of toxigenic and non-toxigenic
            Corynebacterium diphtheriae in Belarus during and after the major
            epidemic in 1990s
  JOURNAL   BMC Genomics 18 (1), 873 (2017)
   PUBMED   29132312
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2407572)
  AUTHORS   Sangal,V. and Titov,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-FEB-2016) Faculty of Health and Life Sciences,
            Northumbria University, Ellison Place, Newcastle upon Tyne NE1 8ST,
            United Kingdom (Great Britain)
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LSWO00000000.1.
            The Corynebacterium diphtheriae bv. gravis whole genome shotgun
            (WGS) project has the project accession NZ_LSWO00000000.  This
            version of the project (01) has the accession number
            NZ_LSWO01000000, and consists of sequences
            LSWO01000001-LSWO01000058.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7.5
            Assembly Name          :: S72
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 390.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002202735.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:35:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,311
            CDSs (total)                      :: 2,254
            Genes (coding)                    :: 2,175
            CDSs (with protein)               :: 2,175
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 37 of 79
            Pseudo Genes (incomplete)         :: 55 of 79
            Pseudo Genes (internal stop)      :: 10 of 79
            Pseudo Genes (multiple problems)  :: 19 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2407572
                     /organism="Corynebacterium diphtheriae bv. gravis"
                     /mol_type="genomic DNA"
                     /strain="4994"
                     /host="Homo sapiens"
                     /db_xref="taxon:1720349"
                     /geo_loc_name="Belarus: Brest"
                     /lat_lon="52.13 N 23.66 E"
                     /collection_date="2009"
                     /collected_by="L. Titov"
                     /biovar="gravis"
WGS         LSWO01000001-LSWO01000058
WGS_SCAFLD  NZ_LSWO01000001-NZ_LSWO01000058
//
LOCUS       NZ_LSXT01000000      2394300 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae bv. mitis strain 4726, whole genome
            shotgun sequencing project.
ACCESSION   NZ_LSXT00000000
VERSION     NZ_LSXT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04497003
            Assembly: GCF_002203775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae bv. mitis
  ORGANISM  Corynebacterium diphtheriae bv. mitis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2394300)
  AUTHORS   Grosse-Kock,S., Kolodkina,V., Schwalbe,E.C., Blom,J., Burkovski,A.,
            Hoskisson,P.A., Brisse,S., Smith,D., Sutcliffe,I.C., Titov,L. and
            Sangal,V.
  TITLE     Genomic analysis of endemic clones of toxigenic and non-toxigenic
            Corynebacterium diphtheriae in Belarus during and after the major
            epidemic in 1990s
  JOURNAL   BMC Genomics 18 (1), 873 (2017)
   PUBMED   29132312
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2394300)
  AUTHORS   Sangal,V. and Titov,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-FEB-2016) Faculty of Health and Life Sciences,
            Northumbria University, Ellison Place, Newcastle upon Tyne NE1 8ST,
            United Kingdom (Great Britain)
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LSXT00000000.1.
            The Corynebacterium diphtheriae bv. mitis whole genome shotgun
            (WGS) project has the project accession NZ_LSXT00000000.  This
            version of the project (01) has the accession number
            NZ_LSXT01000000, and consists of sequences
            LSXT01000001-LSXT01000054.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1
            Assembly Name          :: S107
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 55.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002203775.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,288
            CDSs (total)                      :: 2,232
            Genes (coding)                    :: 2,158
            CDSs (with protein)               :: 2,158
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 32 of 74
            Pseudo Genes (incomplete)         :: 52 of 74
            Pseudo Genes (internal stop)      :: 13 of 74
            Pseudo Genes (multiple problems)  :: 19 of 74
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2394300
                     /organism="Corynebacterium diphtheriae bv. mitis"
                     /mol_type="genomic DNA"
                     /strain="4726"
                     /host="Homo sapiens"
                     /db_xref="taxon:1806053"
                     /geo_loc_name="Belarus: Minsk"
                     /lat_lon="53.90 N 27.56 E"
                     /collection_date="2007"
                     /collected_by="L. Titov"
                     /biovar="mitis"
WGS         LSXT01000001-LSXT01000054
WGS_SCAFLD  NZ_LSXT01000001-NZ_LSXT01000054
//
LOCUS       NZ_LYUR01000000      4936787 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter kobei strain ECC3018, whole genome shotgun sequencing
            project.
ACCESSION   NZ_LYUR00000000
VERSION     NZ_LYUR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05173299
            Assembly: GCF_002165535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter kobei
  ORGANISM  Enterobacter kobei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 4936787)
  AUTHORS   Zhou,K., Yu,W., Bonnet,R., Cattoir,V., Shen,P., Wang,B.,
            Rossen,J.W. and Xiao,Y.
  TITLE     Emergence of a novel Enterobacter kobei clone carrying
            chromosomal-encoded CTX-M-12 with diversified pathogenicity in
            northeast China
  JOURNAL   New Microbes New Infect 17, 7-10 (2017)
   PUBMED   28243445
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4936787)
  AUTHORS   Zhou,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAY-2016) The First Affiliated Hospital, Zhejiang
            University, Qingchun 79, Hangzhou 310003, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LYUR00000000.1.
            The Enterobacter kobei whole genome shotgun (WGS) project has the
            project accession NZ_LYUR00000000.  This version of the project
            (01) has the accession number NZ_LYUR01000000, and consists of
            sequences LYUR01000001-LYUR01000053.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            The organism was changed from 'Enterobacter cloacae' to
            'Enterobacter kobei' in January 2019.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_002165535.1
            Current Name        :: Enterobacter kobei
            Previous Name       :: Enterobacter cloacae
            Date Updated        :: 2019-01-07
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_001729765.1
            A1 Name             :: Enterobacter kobei
            A1 ANI              :: 99.12429%
            A1 Query Coverage   :: 85.97%
            A1 Subject Coverage :: 86.13%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_000755525.1
            A2 Name             :: Enterobacter cloacae
            A2 ANI              :: 88.43079%
            A2 Query Coverage   :: 81.67%
            A2 Subject Coverage :: 72.62%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 260.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002165535.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:56:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,785
            CDSs (total)                      :: 4,705
            Genes (coding)                    :: 4,611
            CDSs (with protein)               :: 4,611
            Genes (RNA)                       :: 80
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 94
            CDSs (without protein)            :: 94
            Pseudo Genes (ambiguous residues) :: 0 of 94
            Pseudo Genes (frameshifted)       :: 34 of 94
            Pseudo Genes (incomplete)         :: 58 of 94
            Pseudo Genes (internal stop)      :: 18 of 94
            Pseudo Genes (multiple problems)  :: 13 of 94
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4936787
                     /organism="Enterobacter kobei"
                     /mol_type="genomic DNA"
                     /strain="ECC3018"
                     /isolation_source="Bronchoalvelar lavage (BAL)"
                     /host="Homo sapiens"
                     /db_xref="taxon:208224"
                     /geo_loc_name="China: Liaoning"
                     /lat_lon="41.8057 N 123.43153 E"
                     /collection_date="2011-08"
                     /collected_by="Yonghong Xiao"
WGS         LYUR01000001-LYUR01000053
WGS_SCAFLD  NZ_LYUR01000001-NZ_LYUR01000053
//
LOCUS       NZ_LSXM01000000      2404702 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae bv. gravis strain 4502, whole genome
            shotgun sequencing project.
ACCESSION   NZ_LSXM00000000
VERSION     NZ_LSXM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04496997
            Assembly: GCF_002203705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae bv. gravis
  ORGANISM  Corynebacterium diphtheriae bv. gravis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2404702)
  AUTHORS   Grosse-Kock,S., Kolodkina,V., Schwalbe,E.C., Blom,J., Burkovski,A.,
            Hoskisson,P.A., Brisse,S., Smith,D., Sutcliffe,I.C., Titov,L. and
            Sangal,V.
  TITLE     Genomic analysis of endemic clones of toxigenic and non-toxigenic
            Corynebacterium diphtheriae in Belarus during and after the major
            epidemic in 1990s
  JOURNAL   BMC Genomics 18 (1), 873 (2017)
   PUBMED   29132312
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2404702)
  AUTHORS   Sangal,V. and Titov,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-FEB-2016) Faculty of Health and Life Sciences,
            Northumbria University, Ellison Place, Newcastle upon Tyne NE1 8ST,
            United Kingdom (Great Britain)
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LSXM00000000.1.
            The Corynebacterium diphtheriae bv. gravis whole genome shotgun
            (WGS) project has the project accession NZ_LSXM00000000.  This
            version of the project (01) has the accession number
            NZ_LSXM01000000, and consists of sequences
            LSXM01000001-LSXM01000049.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1
            Assembly Name          :: S99
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 55.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002203705.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:41:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,301
            CDSs (total)                      :: 2,238
            Genes (coding)                    :: 2,170
            CDSs (with protein)               :: 2,170
            Genes (RNA)                       :: 63
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5 (5S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 32 of 68
            Pseudo Genes (incomplete)         :: 49 of 68
            Pseudo Genes (internal stop)      :: 10 of 68
            Pseudo Genes (multiple problems)  :: 19 of 68
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2404702
                     /organism="Corynebacterium diphtheriae bv. gravis"
                     /mol_type="genomic DNA"
                     /strain="4502"
                     /host="Homo sapiens"
                     /db_xref="taxon:1720349"
                     /geo_loc_name="Belarus: Gomel"
                     /lat_lon="52.44 N 30.98 E"
                     /collection_date="2006"
                     /collected_by="L. Titov"
                     /biovar="gravis"
WGS         LSXM01000001-LSXM01000049
WGS_SCAFLD  NZ_LSXM01000001-NZ_LSXM01000049
//
LOCUS       NZ_LSWI01000000      2386985 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae bv. gravis strain 5027, whole genome
            shotgun sequencing project.
ACCESSION   NZ_LSWI00000000
VERSION     NZ_LSWI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04496981
            Assembly: GCF_002203495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae bv. gravis
  ORGANISM  Corynebacterium diphtheriae bv. gravis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2386985)
  AUTHORS   Grosse-Kock,S., Kolodkina,V., Schwalbe,E.C., Blom,J., Burkovski,A.,
            Hoskisson,P.A., Brisse,S., Smith,D., Sutcliffe,I.C., Titov,L. and
            Sangal,V.
  TITLE     Genomic analysis of endemic clones of toxigenic and non-toxigenic
            Corynebacterium diphtheriae in Belarus during and after the major
            epidemic in 1990s
  JOURNAL   BMC Genomics 18 (1), 873 (2017)
   PUBMED   29132312
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2386985)
  AUTHORS   Sangal,V. and Titov,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-FEB-2016) Faculty of Health and Life Sciences,
            Northumbria University, Ellison Place, Newcastle upon Tyne NE1 8ST,
            United Kingdom (Great Britain)
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LSWI00000000.1.
            The Corynebacterium diphtheriae bv. gravis whole genome shotgun
            (WGS) project has the project accession NZ_LSWI00000000.  This
            version of the project (01) has the accession number
            NZ_LSWI01000000, and consists of sequences
            LSWI01000001-LSWI01000054.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1
            Assembly Name          :: S55
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 54.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002203495.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:36:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,300
            CDSs (total)                      :: 2,237
            Genes (coding)                    :: 2,163
            CDSs (with protein)               :: 2,163
            Genes (RNA)                       :: 63
            rRNAs                             :: 4, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 1 (5S, 16S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 36 of 74
            Pseudo Genes (incomplete)         :: 45 of 74
            Pseudo Genes (internal stop)      :: 14 of 74
            Pseudo Genes (multiple problems)  :: 17 of 74
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2386985
                     /organism="Corynebacterium diphtheriae bv. gravis"
                     /mol_type="genomic DNA"
                     /strain="5027"
                     /host="Homo sapiens"
                     /db_xref="taxon:1720349"
                     /geo_loc_name="Belarus: Brest"
                     /lat_lon="52.13 N 23.66 E"
                     /collection_date="1979"
                     /collected_by="L. Titov"
                     /biovar="gravis"
WGS         LSWI01000001-LSWI01000054
WGS_SCAFLD  NZ_LSWI01000001-NZ_LSWI01000054
//
LOCUS       NZ_PTRS01000000      4888594 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Escherichia albertii strain MOD1-EC1723, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PTRS00000000
VERSION     NZ_PTRS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06045921
            Assembly: GCF_002965725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia albertii
  ORGANISM  Escherichia albertii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4888594)
  AUTHORS   Gangiredla,J., Mammel,M.K., Barnaba,T.J., Tartera,C., Gebru,S.T.,
            Patel,I.R., Leonard,S.R., Kotewicz,M.L., Lampel,K.A., Elkins,C.A.
            and Lacher,D.W.
  TITLE     Draft Genome Sequences of Escherichia albertii, Escherichia
            fergusonii, and Strains Belonging to Six Cryptic Lineages of
            Escherichia spp
  JOURNAL   Genome Announc 6 (18), e00271-18 (2018)
   PUBMED   29724828
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4888594)
  AUTHORS   Gangiredla,J., Mammel,M.K., Barnaba,T., Tartera,C., Gebru,S.,
            Patel,I.R., Leonard,S.R., Kotewicz,M.L., Elkins,C.A. and
            Lacher,D.W.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-FEB-2018) CFSAN-ORS-DM-MMSB, US Food and Drug
            Administration, 5100 Paint Branch Parkway, College Park, MD 20740,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PTRS00000000.1.
            The Escherichia albertii whole genome shotgun (WGS) project has the
            project accession NZ_PTRS00000000.  This version of the project
            (01) has the accession number NZ_PTRS01000000, and consists of
            sequences PTRS01000001-PTRS01000260.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 24.4x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002965725.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:03:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,910
            CDSs (total)                      :: 4,800
            Genes (coding)                    :: 4,473
            CDSs (with protein)               :: 4,473
            Genes (RNA)                       :: 110
            rRNAs                             :: 8, 9, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1 (5S, 16S)
            partial rRNAs                     :: 8, 6 (16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 112 of 327
            Pseudo Genes (incomplete)         :: 225 of 327
            Pseudo Genes (internal stop)      :: 53 of 327
            Pseudo Genes (multiple problems)  :: 52 of 327
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4888594
                     /organism="Escherichia albertii"
                     /mol_type="genomic DNA"
                     /strain="MOD1-EC1723"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:208962"
                     /geo_loc_name="USA: MN"
                     /collection_date="2005"
                     /collected_by="Michigan State University U STEC"
WGS         PTRS01000001-PTRS01000260
WGS_SCAFLD  NZ_PTRS01000001-NZ_PTRS01000260
//
LOCUS       NZ_FNKH01000000      5198474 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Crystallibacter crystallopoietes strain DSM 20117, whole genome
            shotgun sequencing project.
ACCESSION   NZ_FNKH00000000
VERSION     NZ_FNKH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04489742
            Assembly: GCF_900100805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Crystallibacter crystallopoietes
  ORGANISM  Crystallibacter crystallopoietes
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Crystallibacter.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNKH00000000.1.
            The Crystallibacter crystallopoietes whole genome shotgun (WGS)
            project has the project accession NZ_FNKH00000000.  This version of
            the project (01) has the accession number NZ_FNKH01000000, and
            consists of sequences FNKH01000001-FNKH01000003.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900100805.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:39:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,885
            CDSs (total)                      :: 4,822
            Genes (coding)                    :: 4,728
            CDSs (with protein)               :: 4,728
            Genes (RNA)                       :: 63
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 94
            CDSs (without protein)            :: 94
            Pseudo Genes (ambiguous residues) :: 0 of 94
            Pseudo Genes (frameshifted)       :: 58 of 94
            Pseudo Genes (incomplete)         :: 41 of 94
            Pseudo Genes (internal stop)      :: 6 of 94
            Pseudo Genes (multiple problems)  :: 11 of 94
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5198474
                     /organism="Crystallibacter crystallopoietes"
                     /mol_type="genomic DNA"
                     /strain="DSM 20117"
                     /type_material="type strain of Arthrobacter
                     crystallopoietes"
                     /db_xref="taxon:37928"
WGS         FNKH01000001-FNKH01000003
WGS_SCAFLD  NZ_FNKH01000001-NZ_FNKH01000003
//
LOCUS       NZ_PXKD01000000      5044632 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter kobei strain CRE54, whole genome shotgun sequencing
            project.
ACCESSION   NZ_PXKD00000000
VERSION     NZ_PXKD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08623822
            Assembly: GCF_003401245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter kobei
  ORGANISM  Enterobacter kobei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 5044632)
  AUTHORS   Senchyna,F., Gaur,R., Sandlund,J., Truong,C., Tremintin,G.,
            Kueltz,D., Gomez,C.A., Tamburini,F.B., Andermann,T., Bhatt,A.S.,
            Tickler,I., Watz,N., Budvytiene,I., Shi,G., Tenover,F.C. and
            Banaei,N.
  TITLE     Diverse Mechanisms of Resistance in Carbapenem-Resistant
            Enterobacteriaceae at a Health Care System in Silicon Valley,
            California
  JOURNAL   bioRxivorg (2018) In press
REFERENCE   2  (bases 1 to 5044632)
  AUTHORS   Tamburini,F.B., Bhatt,A.S., Senchyna,F. and Banaei,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-FEB-2018) Clinical Microbiology Laboratory, Stanford
            Healthcare, 3375 Hillview Ave, Palo Alto, CA 94304, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PXKD00000000.1.
            The Enterobacter kobei whole genome shotgun (WGS) project has the
            project accession NZ_PXKD00000000.  This version of the project
            (01) has the accession number NZ_PXKD01000000, and consists of
            sequences PXKD01000001-PXKD01000200.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: SPAdes v. 3.8.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003401245.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:09:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,958
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,789
            CDSs (with protein)               :: 4,789
            Genes (RNA)                       :: 73
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 96
            CDSs (without protein)            :: 96
            Pseudo Genes (ambiguous residues) :: 0 of 96
            Pseudo Genes (frameshifted)       :: 31 of 96
            Pseudo Genes (incomplete)         :: 63 of 96
            Pseudo Genes (internal stop)      :: 16 of 96
            Pseudo Genes (multiple problems)  :: 11 of 96
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5044632
                     /organism="Enterobacter kobei"
                     /mol_type="genomic DNA"
                     /strain="CRE54"
                     /isolation_source="bloodstream"
                     /host="Homo sapiens"
                     /db_xref="taxon:208224"
                     /geo_loc_name="USA: Palo Alto, California"
                     /lat_lon="37.4335 N 122.1754 W"
                     /collection_date="2016-03-01"
                     /collected_by="Stanford Healthcare Clinical Microbiology
                     Laboratory"
                     /genotype="carbapenemase-negative"
WGS         PXKD01000001-PXKD01000200
WGS_SCAFLD  NZ_PXKD01000001-NZ_PXKD01000200
//
LOCUS       NZ_LSWF01000000      2447135 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae bv. mitis strain 2915, whole genome
            shotgun sequencing project.
ACCESSION   NZ_LSWF00000000
VERSION     NZ_LSWF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04496977
            Assembly: GCF_002203455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae bv. mitis
  ORGANISM  Corynebacterium diphtheriae bv. mitis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2447135)
  AUTHORS   Grosse-Kock,S., Kolodkina,V., Schwalbe,E.C., Blom,J., Burkovski,A.,
            Hoskisson,P.A., Brisse,S., Smith,D., Sutcliffe,I.C., Titov,L. and
            Sangal,V.
  TITLE     Genomic analysis of endemic clones of toxigenic and non-toxigenic
            Corynebacterium diphtheriae in Belarus during and after the major
            epidemic in 1990s
  JOURNAL   BMC Genomics 18 (1), 873 (2017)
   PUBMED   29132312
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2447135)
  AUTHORS   Sangal,V. and Titov,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-FEB-2016) Faculty of Health and Life Sciences,
            Northumbria University, Ellison Place, Newcastle upon Tyne NE1 8ST,
            United Kingdom (Great Britain)
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LSWF00000000.1.
            The Corynebacterium diphtheriae bv. mitis whole genome shotgun
            (WGS) project has the project accession NZ_LSWF00000000.  This
            version of the project (01) has the accession number
            NZ_LSWF01000000, and consists of sequences
            LSWF01000001-LSWF01000042.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7.5
            Assembly Name          :: S51
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 303.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002203455.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:41:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,364
            CDSs (total)                      :: 2,305
            Genes (coding)                    :: 2,226
            CDSs (with protein)               :: 2,226
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 31 of 79
            Pseudo Genes (incomplete)         :: 55 of 79
            Pseudo Genes (internal stop)      :: 16 of 79
            Pseudo Genes (multiple problems)  :: 19 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2447135
                     /organism="Corynebacterium diphtheriae bv. mitis"
                     /mol_type="genomic DNA"
                     /strain="2915"
                     /host="Homo sapiens"
                     /db_xref="taxon:1806053"
                     /geo_loc_name="Belarus: Vitebsk"
                     /lat_lon="55.18 N 30.16 E"
                     /collection_date="2004"
                     /collected_by="L. Titov"
                     /biovar="mitis"
WGS         LSWF01000001-LSWF01000042
WGS_SCAFLD  NZ_LSWF01000001-NZ_LSWF01000042
//
LOCUS       NZ_LSXY01000000      2432899 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae bv. gravis strain 1791, whole genome
            shotgun sequencing project.
ACCESSION   NZ_LSXY00000000
VERSION     NZ_LSXY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04496984
            Assembly: GCF_002203155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae bv. gravis
  ORGANISM  Corynebacterium diphtheriae bv. gravis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2432899)
  AUTHORS   Grosse-Kock,S., Kolodkina,V., Schwalbe,E.C., Blom,J., Burkovski,A.,
            Hoskisson,P.A., Brisse,S., Smith,D., Sutcliffe,I.C., Titov,L. and
            Sangal,V.
  TITLE     Genomic analysis of endemic clones of toxigenic and non-toxigenic
            Corynebacterium diphtheriae in Belarus during and after the major
            epidemic in 1990s
  JOURNAL   BMC Genomics 18 (1), 873 (2017)
   PUBMED   29132312
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2432899)
  AUTHORS   Sangal,V. and Titov,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-FEB-2016) Faculty of Health and Life Sciences,
            Northumbria University, Ellison Place, Newcastle upon Tyne NE1 8ST,
            United Kingdom (Great Britain)
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LSXY00000000.1.
            The Corynebacterium diphtheriae bv. gravis whole genome shotgun
            (WGS) project has the project accession NZ_LSXY00000000.  This
            version of the project (01) has the accession number
            NZ_LSXY01000000, and consists of sequences
            LSXY01000001-LSXY01000042.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1
            Assembly Name          :: S112
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 46.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002203155.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:43:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,348
            CDSs (total)                      :: 2,286
            Genes (coding)                    :: 2,217
            CDSs (with protein)               :: 2,217
            Genes (RNA)                       :: 62
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 36 of 69
            Pseudo Genes (incomplete)         :: 44 of 69
            Pseudo Genes (internal stop)      :: 13 of 69
            Pseudo Genes (multiple problems)  :: 18 of 69
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2432899
                     /organism="Corynebacterium diphtheriae bv. gravis"
                     /mol_type="genomic DNA"
                     /strain="1791"
                     /host="Homo sapiens"
                     /db_xref="taxon:1720349"
                     /geo_loc_name="Belarus: Minsk"
                     /lat_lon="53.90 N 27.56 E"
                     /collection_date="2000"
                     /collected_by="L. Titov"
                     /biovar="gravis"
WGS         LSXY01000001-LSXY01000042
WGS_SCAFLD  NZ_LSXY01000001-NZ_LSXY01000042
//
LOCUS       NZ_PHKY01000000      2934060 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain 10-131, whole genome shotgun sequencing
            project.
ACCESSION   NZ_PHKY00000000
VERSION     NZ_PHKY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08057240
            Assembly: GCF_002909305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2934060)
  AUTHORS   Sassi,M., Guerin,F., Zouari,A., Auzou,M., Fines-Guyon,M.,
            Potrel,S., Collet,A., Auger,G., Bonnet,R. and Cattoir,V.
  TITLE     Emergence of linezolid resistance in enterococci in France
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2934060)
  AUTHORS   Sassi,M., Guerin,F., Zouari,A., Auzou,M., Fines-Guyon,M.,
            Potrel,S., Collet,A., Auger,G., Bonnet,R. and Cattoir,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-DEC-2017) Microbiology, CHU de Rennes, 2 rue Henri Le
            Guilloux, Rennes 35033, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PHKY00000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_PHKY00000000.  This version of the project
            (01) has the accession number NZ_PHKY01000000, and consists of
            sequences PHKY01000001-PHKY01000006.
            Bacteria and source DNA available from National Reference Center
            for Enterococci, CHU de Rennes, 2 rue Henri Le Guilloux, 35033
            Rennes Cedex, France.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-NOV-2017
            Assembly Method        :: SPAdes v. 13.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 130.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002909305.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:14:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,009
            CDSs (total)                      :: 2,926
            Genes (coding)                    :: 2,719
            CDSs (with protein)               :: 2,719
            Genes (RNA)                       :: 83
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 207
            CDSs (without protein)            :: 207
            Pseudo Genes (ambiguous residues) :: 0 of 207
            Pseudo Genes (frameshifted)       :: 44 of 207
            Pseudo Genes (incomplete)         :: 167 of 207
            Pseudo Genes (internal stop)      :: 19 of 207
            Pseudo Genes (multiple problems)  :: 18 of 207
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2934060
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="10-131"
                     /isolation_source="Catheter"
                     /host="Homo sapiens"
                     /db_xref="taxon:1352"
                     /geo_loc_name="France: Clichy"
                     /lat_lon="48.9045 N 2.3048 E"
                     /collection_date="2010"
                     /collected_by="NRC Enterococci"
WGS         PHKY01000001-PHKY01000006
WGS_SCAFLD  NZ_PHKY01000001-NZ_PHKY01000006
//
LOCUS       NZ_LSYM01000000      2426904 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Corynebacterium diphtheriae bv. gravis strain 4505, whole genome
            shotgun sequencing project.
ACCESSION   NZ_LSYM00000000
VERSION     NZ_LSYM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04497032
            Assembly: GCF_002203965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae bv. gravis
  ORGANISM  Corynebacterium diphtheriae bv. gravis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2426904)
  AUTHORS   Grosse-Kock,S., Kolodkina,V., Schwalbe,E.C., Blom,J., Burkovski,A.,
            Hoskisson,P.A., Brisse,S., Smith,D., Sutcliffe,I.C., Titov,L. and
            Sangal,V.
  TITLE     Genomic analysis of endemic clones of toxigenic and non-toxigenic
            Corynebacterium diphtheriae in Belarus during and after the major
            epidemic in 1990s
  JOURNAL   BMC Genomics 18 (1), 873 (2017)
   PUBMED   29132312
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2426904)
  AUTHORS   Sangal,V. and Titov,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-FEB-2016) Faculty of Health and Life Sciences,
            Northumbria University, Ellison Place, Newcastle upon Tyne NE1 8ST,
            United Kingdom (Great Britain)
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LSYM00000000.1.
            The Corynebacterium diphtheriae bv. gravis whole genome shotgun
            (WGS) project has the project accession NZ_LSYM00000000.  This
            version of the project (01) has the accession number
            NZ_LSYM01000000, and consists of sequences
            LSYM01000001-LSYM01000058.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1
            Assembly Name          :: S139
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 47.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002203965.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:42:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,338
            CDSs (total)                      :: 2,277
            Genes (coding)                    :: 2,203
            CDSs (with protein)               :: 2,203
            Genes (RNA)                       :: 61
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 34 of 74
            Pseudo Genes (incomplete)         :: 49 of 74
            Pseudo Genes (internal stop)      :: 11 of 74
            Pseudo Genes (multiple problems)  :: 17 of 74
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2426904
                     /organism="Corynebacterium diphtheriae bv. gravis"
                     /mol_type="genomic DNA"
                     /strain="4505"
                     /host="Homo sapiens"
                     /db_xref="taxon:1720349"
                     /geo_loc_name="Belarus: Gomel"
                     /lat_lon="52.44 N 30.98 E"
                     /collection_date="2006"
                     /collected_by="L. Titov"
                     /biovar="gravis"
WGS         LSYM01000001-LSYM01000058
WGS_SCAFLD  NZ_LSYM01000001-NZ_LSYM01000058
//
LOCUS       NZ_RXFU01000000      4861244 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter hormaechei strain Entb306, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RXFU00000000
VERSION     NZ_RXFU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10534791
            Assembly: GCF_004004595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 4861244)
  AUTHORS   Harrison,L.B., Selmecki,A.M. and Hanson,N.D.
  TITLE     Draft Genome Assemblies of Clinical Isolates of Klebsiella
            pneumoniae V9011662 and Enterobacter hormaechei ENTB306
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4861244)
  AUTHORS   Harrison,L.B., Selmecki,A.M. and Hanson,N.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-DEC-2018) Medical Microbiology and Immunology,
            Creighton University, 2500 California Plaza, Omaha, NE 68178, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RXFU00000000.1.
            The Enterobacter hormaechei whole genome shotgun (WGS) project has
            the project accession NZ_RXFU00000000.  This version of the project
            (01) has the accession number NZ_RXFU01000000, and consists of
            sequences RXFU01000001-RXFU01000007.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: JUL-2017
            Assembly Method        :: SPAdes v. 3.10
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 79.3x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004004595.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:41:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,675
            CDSs (total)                      :: 4,553
            Genes (coding)                    :: 4,498
            CDSs (with protein)               :: 4,498
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 6, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 5, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 6 (16S, 23S)
            tRNAs                             :: 94
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 55
            CDSs (without protein)            :: 55
            Pseudo Genes (ambiguous residues) :: 0 of 55
            Pseudo Genes (frameshifted)       :: 21 of 55
            Pseudo Genes (incomplete)         :: 41 of 55
            Pseudo Genes (internal stop)      :: 5 of 55
            Pseudo Genes (multiple problems)  :: 10 of 55
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4861244
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="Entb306"
                     /host="Homo sapiens"
                     /db_xref="taxon:158836"
WGS         RXFU01000001-RXFU01000007
WGS_SCAFLD  NZ_RXFU01000001-NZ_RXFU01000007
//
LOCUS       NZ_NEYA01000000      4728553 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Cronobacter sakazakii strain MOD1-comp46, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NEYA00000000
VERSION     NZ_NEYA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04329636
            Assembly: GCF_002198935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter sakazakii
  ORGANISM  Cronobacter sakazakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4728553)
  AUTHORS   Chase,H., Gopinath,G. and Tall,B.
  TITLE     Characterization of Cronobacter sakazakii serotype O:2, Sequence
            type 64 strains, isolated from clinical and the environment samples
            from powdered infant formula and dried milk powder manufacturing
            facilities which can utilize malonate
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4728553)
  AUTHORS   Chase,H., Gopinath,G. and Tall,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-MAY-2017) US FDA, CFSAN, 8301 Muirkirk Road, Laurel,
            MD 20708, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NEYA00000000.1.
            The Cronobacter sakazakii whole genome shotgun (WGS) project has
            the project accession NZ_NEYA00000000.  This version of the project
            (01) has the accession number NZ_NEYA01000000, and consists of
            sequences NEYA01000001-NEYA01000107.
            Bacteria and source DNA available from Ben D. Tall, PhD.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 15-DEC-2016
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002198935.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:48:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,595
            CDSs (total)                      :: 4,510
            Genes (coding)                    :: 4,436
            CDSs (with protein)               :: 4,436
            Genes (RNA)                       :: 85
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 72
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 17 of 74
            Pseudo Genes (incomplete)         :: 55 of 74
            Pseudo Genes (internal stop)      :: 10 of 74
            Pseudo Genes (multiple problems)  :: 7 of 74
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4728553
                     /organism="Cronobacter sakazakii"
                     /mol_type="genomic DNA"
                     /strain="MOD1-comp46"
                     /isolation_source="environment"
                     /db_xref="taxon:28141"
                     /geo_loc_name="USA"
                     /collected_by="United States Food and Drug Administration"
WGS         NEYA01000001-NEYA01000107
WGS_SCAFLD  NZ_NEYA01000001-NZ_NEYA01000107
//
LOCUS       NZ_UNUB01000000      4901260 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter hormaechei strain 2485STDY5438459, whole genome
            shotgun sequencing project.
ACCESSION   NZ_UNUB00000000
VERSION     NZ_UNUB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA1964904
            Assembly: GCF_900558145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1
  CONSRTM   Pathogen Informatics
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2018) WTSI, Pathogen Informatics, Wellcome Trust
            Sanger Institute, CB10 1SA, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            UNUB00000000.1.
            The Enterobacter hormaechei whole genome shotgun (WGS) project has
            the project accession NZ_UNUB00000000.  This version of the project
            (01) has the accession number NZ_UNUB01000000, and consists of
            sequences UNUB01000001-UNUB01000029.
            The organism was changed from 'Enterobacter cloacae' to
            'Enterobacter hormaechei' in June  2020.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_900558145.1
            Current Name        :: Enterobacter hormaechei
            Previous Name       :: Enterobacter cloacae
            Date Updated        :: 2020-06-25
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_001729725.1
            A1 Name             :: Enterobacter hormaechei
            A1 ANI              :: 99.05%
            A1 Query Coverage   :: 88.51%
            A1 Subject Coverage :: 90.71%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_000025565.1
            A2 Name             :: Enterobacter cloacae
            A2 ANI              :: 87.53%
            A2 Query Coverage   :: 81.27%
            A2 Subject Coverage :: 71.15%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900558145.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:44:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,605
            Genes (coding)                    :: 4,569
            CDSs (with protein)               :: 4,569
            Genes (RNA)                       :: 91
            rRNAs                             :: 5, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 15 of 36
            Pseudo Genes (incomplete)         :: 29 of 36
            Pseudo Genes (internal stop)      :: 6 of 36
            Pseudo Genes (multiple problems)  :: 11 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4901260
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="2485STDY5438459"
                     /db_xref="taxon:158836"
WGS         UNUB01000001-UNUB01000029
WGS_SCAFLD  NZ_UNUB01000001-NZ_UNUB01000029
//
LOCUS       NZ_MRXW01000000      4690515 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Cronobacter sakazakii strain MOD1-SP4, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MRXW00000000
VERSION     NZ_MRXW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06124513
            Assembly: GCF_002075775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter sakazakii
  ORGANISM  Cronobacter sakazakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4690515)
  AUTHORS   Tall,B., Han,K., Lee,C., Jeong,H., Gopinath,G., Chase,H. and
            Lehner,A.
  TITLE     Characterization of Cronobacter Environmental Isolates from a PIF
            Manufacturing Facility
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4690515)
  AUTHORS   Tall,B., Han,K., Lee,C., Jeong,H., Gopinath,G., Chase,H. and
            Lehner,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-DEC-2016) US FDA, CFSAN, 8301 Muirkirk Road, Laurel,
            MD 20708, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MRXW00000000.1.
            The Cronobacter sakazakii whole genome shotgun (WGS) project has
            the project accession NZ_MRXW00000000.  This version of the project
            (01) has the accession number NZ_MRXW01000000, and consists of
            sequences MRXW01000001-MRXW01000045.
            Bacteria and source DNA available from Angelika Lehner, PhD.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002075775.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:47:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,561
            CDSs (total)                      :: 4,478
            Genes (coding)                    :: 4,404
            CDSs (with protein)               :: 4,404
            Genes (RNA)                       :: 83
            rRNAs                             :: 6, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 23 of 74
            Pseudo Genes (incomplete)         :: 54 of 74
            Pseudo Genes (internal stop)      :: 8 of 74
            Pseudo Genes (multiple problems)  :: 9 of 74
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4690515
                     /organism="Cronobacter sakazakii"
                     /mol_type="genomic DNA"
                     /strain="MOD1-SP4"
                     /isolation_source="environmental swab sponge powder infant
                     formula manufacturing facility"
                     /db_xref="taxon:28141"
                     /geo_loc_name="Switzerland"
                     /collection_date="2011"
                     /collected_by="Univ. of Zurich"
WGS         MRXW01000001-MRXW01000045
WGS_SCAFLD  NZ_MRXW01000001-NZ_MRXW01000045
//
LOCUS       NZ_JAFLIV010000000   2704641 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus lactis strain 76-1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAFLIV000000000
VERSION     NZ_JAFLIV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN18018075
            Assembly: GCF_018397385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus lactis
  ORGANISM  Enterococcus lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2704641)
  AUTHORS   Deng,F., Chen,Y., Zhou,X., Xiao,H., Sun,T., Deng,Y. and Wen,J.
  TITLE     New Insights into the Virulence Traits and Antibiotic Resistance of
            Enterococci Isolated from Diverse Probiotic Products
  JOURNAL   Microorganisms 9 (4), 726 (2021)
   PUBMED   33807433
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2704641)
  AUTHORS   Deng,F. and Chen,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-FEB-2021) Life Science, South China Agriculture
            University, Wushan, Guangzhou, Guangdong 510642, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAFLIV000000000.1.
            The Enterococcus lactis whole genome shotgun (WGS) project has the
            project accession NZ_JAFLIV000000000.  This version of the project
            (01) has the accession number NZ_JAFLIV010000000, and consists of
            sequences JAFLIV010000001-JAFLIV010000083.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_018397385.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:10:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,616
            Genes (coding)                    :: 2,477
            CDSs (with protein)               :: 2,477
            Genes (RNA)                       :: 93
            rRNAs                             :: 6, 10, 12 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 10, 12 (16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 139
            CDSs (without protein)            :: 139
            Pseudo Genes (ambiguous residues) :: 0 of 139
            Pseudo Genes (frameshifted)       :: 49 of 139
            Pseudo Genes (incomplete)         :: 79 of 139
            Pseudo Genes (internal stop)      :: 27 of 139
            Pseudo Genes (multiple problems)  :: 15 of 139
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2704641
                     /organism="Enterococcus lactis"
                     /mol_type="genomic DNA"
                     /strain="76-1"
                     /isolation_source="probiotic product"
                     /db_xref="taxon:357441"
                     /geo_loc_name="China: Shandong"
                     /collection_date="2019"
WGS         JAFLIV010000001-JAFLIV010000083
WGS_SCAFLD  NZ_JAFLIV010000001-NZ_JAFLIV010000083
//
LOCUS       NZ_PTOW01000000      4503135 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Cronobacter sakazakii strain MOD1_LR715, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PTOW00000000
VERSION     NZ_PTOW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08397404
            Assembly: GCF_002942325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter sakazakii
  ORGANISM  Cronobacter sakazakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4503135)
  AUTHORS   Jang,H., Woo,J., Lee,Y., Gopinath,G. and Tall,B.
  TITLE     Whole Genome Sequences of Thirty Cronobacter sakazakii Isolates
            obtained from Plant-origin Foods and Dried Food Manufacturing
            Environments
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4503135)
  AUTHORS   Jang,H., Woo,J., Lee,Y., Gopinath,G. and Tall,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-FEB-2018) US FDA, CFSAN, 8301 Muirkirk Road, Laurel,
            MD 20708, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PTOW00000000.1.
            The Cronobacter sakazakii whole genome shotgun (WGS) project has
            the project accession NZ_PTOW00000000.  This version of the project
            (01) has the accession number NZ_PTOW01000000, and consists of
            sequences PTOW01000001-PTOW01000068.
            Bacteria available from ben.tall@fda.hhs.gov.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002942325.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:57:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,316
            CDSs (total)                      :: 4,232
            Genes (coding)                    :: 4,141
            CDSs (with protein)               :: 4,141
            Genes (RNA)                       :: 84
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 27 of 91
            Pseudo Genes (incomplete)         :: 66 of 91
            Pseudo Genes (internal stop)      :: 9 of 91
            Pseudo Genes (multiple problems)  :: 9 of 91
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4503135
                     /organism="Cronobacter sakazakii"
                     /mol_type="genomic DNA"
                     /strain="MOD1_LR715"
                     /isolation_source="organic soy"
                     /db_xref="taxon:28141"
                     /geo_loc_name="USA"
                     /collection_date="2006"
                     /collected_by="United States Food and Drug Administration|
                     Center for Food Safety and Applied Nutrition| Office Of
                     Applied Research And Safety Assessment"
WGS         PTOW01000001-PTOW01000068
WGS_SCAFLD  NZ_PTOW01000001-NZ_PTOW01000068
//
LOCUS       NZ_JAIFNR010000000   2769105 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus lactis strain EF204, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAIFNR000000000
VERSION     NZ_JAIFNR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN20247406
            Assembly: GCF_019662445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus lactis
  ORGANISM  Enterococcus lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2769105)
  AUTHORS   Shridhar,P.B., Amachawadi,R.G., Tokach,M., Patel,I., Gangiredla,J.,
            Mammel,M. and Nagaraja,T.G.
  TITLE     Whole genome sequence analyses-based assessment of virulence
            potential and antimicrobial susceptibilities and resistance of
            Enterococcus faecium strains isolated from commercial swine and
            cattle probiotic products
  JOURNAL   J Anim Sci 100 (3) (2022)
   PUBMED   35150575
REFERENCE   2  (bases 1 to 2769105)
  AUTHORS   Shridhar,P.B., Amachawadi,R.G., Tokach,M., Patel,I., Gangiredla,J.
            and Nagaraja,T.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-JUL-2021) Clinical Sciences, Kansas State University,
            1800 Denison Avenue, Q221 Mosier Hall, Department of Clinical
            Sciences, College of Veterinary Medici, Manhattan, KS 66506, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIFNR000000000.1.
            The Enterococcus lactis whole genome shotgun (WGS) project has the
            project accession NZ_JAIFNR000000000.  This version of the project
            (01) has the accession number NZ_JAIFNR010000000, and consists of
            sequences JAIFNR010000001-JAIFNR010000097.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: JUL-2021
            Assembly Method        :: CLC NGS Cell v. 12.03
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_019662445.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:08:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,741
            CDSs (total)                      :: 2,680
            Genes (coding)                    :: 2,543
            CDSs (with protein)               :: 2,543
            Genes (RNA)                       :: 61
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 137
            CDSs (without protein)            :: 137
            Pseudo Genes (ambiguous residues) :: 0 of 137
            Pseudo Genes (frameshifted)       :: 51 of 137
            Pseudo Genes (incomplete)         :: 66 of 137
            Pseudo Genes (internal stop)      :: 36 of 137
            Pseudo Genes (multiple problems)  :: 16 of 137
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2769105
                     /organism="Enterococcus lactis"
                     /mol_type="genomic DNA"
                     /strain="EF204"
                     /isolation_source="Probiotic"
                     /db_xref="taxon:357441"
                     /geo_loc_name="USA: Manhattan, KS"
                     /lat_lon="39.1836 N 96.5717 W"
                     /collection_date="2016"
                     /collected_by="KSU"
WGS         JAIFNR010000001-JAIFNR010000097
WGS_SCAFLD  NZ_JAIFNR010000001-NZ_JAIFNR010000097
//
LOCUS       NZ_JAFLIU010000000   2674723 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus lactis strain 73-1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAFLIU000000000
VERSION     NZ_JAFLIU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN18018074
            Assembly: GCF_018397435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus lactis
  ORGANISM  Enterococcus lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2674723)
  AUTHORS   Deng,F., Chen,Y., Zhou,X., Xiao,H., Sun,T., Deng,Y. and Wen,J.
  TITLE     New Insights into the Virulence Traits and Antibiotic Resistance of
            Enterococci Isolated from Diverse Probiotic Products
  JOURNAL   Microorganisms 9 (4), 726 (2021)
   PUBMED   33807433
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2674723)
  AUTHORS   Deng,F. and Chen,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-FEB-2021) Life Science, South China Agriculture
            University, Wushan, Guangzhou, Guangdong 510642, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAFLIU000000000.1.
            The Enterococcus lactis whole genome shotgun (WGS) project has the
            project accession NZ_JAFLIU000000000.  This version of the project
            (01) has the accession number NZ_JAFLIU010000000, and consists of
            sequences JAFLIU010000001-JAFLIU010000063.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_018397435.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:12:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,668
            CDSs (total)                      :: 2,577
            Genes (coding)                    :: 2,430
            CDSs (with protein)               :: 2,430
            Genes (RNA)                       :: 91
            rRNAs                             :: 5, 8, 11 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 8, 11 (16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 147
            CDSs (without protein)            :: 147
            Pseudo Genes (ambiguous residues) :: 0 of 147
            Pseudo Genes (frameshifted)       :: 48 of 147
            Pseudo Genes (incomplete)         :: 70 of 147
            Pseudo Genes (internal stop)      :: 44 of 147
            Pseudo Genes (multiple problems)  :: 15 of 147
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2674723
                     /organism="Enterococcus lactis"
                     /mol_type="genomic DNA"
                     /strain="73-1"
                     /isolation_source="probiotic product"
                     /db_xref="taxon:357441"
                     /geo_loc_name="China: Jiangxi"
                     /collection_date="2019"
WGS         JAFLIU010000001-JAFLIU010000063
WGS_SCAFLD  NZ_JAFLIU010000001-NZ_JAFLIU010000063
//
LOCUS       NZ_JADHKU010000000   4710775 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter asburiae strain nEC133, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JADHKU000000000
VERSION     NZ_JADHKU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13046969
            Assembly: GCF_015278735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter asburiae
  ORGANISM  Enterobacter asburiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 4710775)
  AUTHORS   Cohen,R., Paikin,S., Rokney,A., Rubin-Blum,M. and Astrahan,P.
  TITLE     Multidrug-resistant enterobacteriaceae in coastal water: an
            emerging threat
  JOURNAL   Antimicrob Resist Infect Control 9 (1), 169 (2020)
   PUBMED   33126924
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4710775)
  AUTHORS   Cohen,R., Paikin,S., Rokney,A., Rubin-,M. and Astrahan,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2019) Marine Biology, Israel Oceanographic and
            Limnological Research, Tel Shikmona, Haifa 3108000, Israel
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADHKU000000000.1.
            The Enterobacter asburiae whole genome shotgun (WGS) project has
            the project accession NZ_JADHKU000000000.  This version of the
            project (01) has the accession number NZ_JADHKU010000000, and
            consists of sequences JADHKU010000001-JADHKU010000036.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_015278735.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:06:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,634
            CDSs (total)                      :: 4,538
            Genes (coding)                    :: 4,439
            CDSs (with protein)               :: 4,439
            Genes (RNA)                       :: 96
            rRNAs                             :: 9, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 3, 2, 5 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 99
            CDSs (without protein)            :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 42 of 99
            Pseudo Genes (incomplete)         :: 70 of 99
            Pseudo Genes (internal stop)      :: 15 of 99
            Pseudo Genes (multiple problems)  :: 22 of 99
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4710775
                     /organism="Enterobacter asburiae"
                     /mol_type="genomic DNA"
                     /strain="nEC133"
                     /isolation_source="Stream water"
                     /db_xref="taxon:61645"
                     /geo_loc_name="Israel: Alexander River estuary"
                     /lat_lon="32.395 N 34.868 E"
                     /collection_date="2018-06"
                     /collected_by="Regev Cohen"
WGS         JADHKU010000001-JADHKU010000036
WGS_SCAFLD  NZ_JADHKU010000001-NZ_JADHKU010000036
//
LOCUS       NZ_JAKTCD010000000   2784681 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus hirae strain LSSP146, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAKTCD000000000
VERSION     NZ_JAKTCD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN26111048
            Assembly: GCF_022427895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus hirae
  ORGANISM  Enterococcus hirae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2784681)
  AUTHORS   Li,J.
  TITLE     The Streptococcus suis genomes of diseased pigs in China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2784681)
  AUTHORS   Li,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2022) College of Food Sciences & Technology,
            Huazhong Agricultural University, No. 1, Shizishan Street, Wuhan,
            Hubei 430070, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKTCD000000000.1.
            The Enterococcus hirae whole genome shotgun (WGS) project has the
            project accession NZ_JAKTCD000000000.  This version of the project
            (01) has the accession number NZ_JAKTCD010000000, and consists of
            sequences JAKTCD010000001-JAKTCD010000042.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 500x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022427895.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:13:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,673
            CDSs (total)                      :: 2,605
            Genes (coding)                    :: 2,505
            CDSs (with protein)               :: 2,505
            Genes (RNA)                       :: 68
            rRNAs                             :: 4, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 1 (5S, 16S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 31 of 100
            Pseudo Genes (incomplete)         :: 55 of 100
            Pseudo Genes (internal stop)      :: 31 of 100
            Pseudo Genes (multiple problems)  :: 14 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2784681
                     /organism="Enterococcus hirae"
                     /mol_type="genomic DNA"
                     /strain="LSSP146"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1354"
                     /geo_loc_name="China: Hebei"
                     /lat_lon="39.56 N 116.20 E"
                     /collection_date="2017-06"
                     /collected_by="Huazhong Agricultural University"
WGS         JAKTCD010000001-JAKTCD010000042
WGS_SCAFLD  NZ_JAKTCD010000001-NZ_JAKTCD010000042
//
LOCUS       NZ_JAJAOH010000000   2672289 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus lactis strain QAUEFNA13, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJAOH000000000
VERSION     NZ_JAJAOH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN20114161
            Assembly: GCF_022509665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus lactis
  ORGANISM  Enterococcus lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2672289)
  AUTHORS   Imran,M., Khan,M.N. and Nielsen,D.S.
  TITLE     Genome sequences of probiotic lactic acid bacteria isolated from
            artisinal fermented milk product Dahi
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2672289)
  AUTHORS   Imran,M., Khan,M.N. and Nielsen,D.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2021) Department of Microbiology, Quaid-I-Azam
            University, Faculty of Biological Sciences, Islamabad, Federal
            45320, Pakistan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJAOH000000000.1.
            The Enterococcus lactis whole genome shotgun (WGS) project has the
            project accession NZ_JAJAOH000000000.  This version of the project
            (01) has the accession number NZ_JAJAOH010000000, and consists of
            sequences JAJAOH010000001-JAJAOH010000081.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-MAY-2021
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 300x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022509665.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:16:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,634
            CDSs (total)                      :: 2,555
            Genes (coding)                    :: 2,415
            CDSs (with protein)               :: 2,415
            Genes (RNA)                       :: 79
            rRNAs                             :: 6, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 4, 4, 3 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 140
            CDSs (without protein)            :: 140
            Pseudo Genes (ambiguous residues) :: 0 of 140
            Pseudo Genes (frameshifted)       :: 51 of 140
            Pseudo Genes (incomplete)         :: 66 of 140
            Pseudo Genes (internal stop)      :: 39 of 140
            Pseudo Genes (multiple problems)  :: 16 of 140
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2672289
                     /organism="Enterococcus lactis"
                     /mol_type="genomic DNA"
                     /strain="QAUEFNA13"
                     /isolation_source="Dahi fermented milk product"
                     /db_xref="taxon:357441"
                     /geo_loc_name="Pakistan: Islamabad"
                     /lat_lon="33.6844 N 73.0479 E"
                     /collection_date="2018-01-01/2021-01-01"
WGS         JAJAOH010000001-JAJAOH010000081
WGS_SCAFLD  NZ_JAJAOH010000001-NZ_JAJAOH010000081
//
LOCUS       NZ_JADHKW010000000   4996618 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter bugandensis strain nEC135, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JADHKW000000000
VERSION     NZ_JADHKW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13046971
            Assembly: GCF_015278695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter bugandensis
  ORGANISM  Enterobacter bugandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter.
REFERENCE   1  (bases 1 to 4996618)
  AUTHORS   Cohen,R., Paikin,S., Rokney,A., Rubin-Blum,M. and Astrahan,P.
  TITLE     Multidrug-resistant enterobacteriaceae in coastal water: an
            emerging threat
  JOURNAL   Antimicrob Resist Infect Control 9 (1), 169 (2020)
   PUBMED   33126924
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4996618)
  AUTHORS   Cohen,R., Paikin,S., Rokney,A., Rubin-,M. and Astrahan,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2019) Marine Biology, Israel Oceanographic and
            Limnological Research, Tel Shikmona, Haifa 3108000, Israel
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADHKW000000000.1.
            The Enterobacter bugandensis whole genome shotgun (WGS) project has
            the project accession NZ_JADHKW000000000.  This version of the
            project (01) has the accession number NZ_JADHKW010000000, and
            consists of sequences JADHKW010000001-JADHKW010000046.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_015278695.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:14:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,908
            CDSs (total)                      :: 4,805
            Genes (coding)                    :: 4,691
            CDSs (with protein)               :: 4,691
            Genes (RNA)                       :: 103
            rRNAs                             :: 7, 4, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 4, 6 (16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 114
            CDSs (without protein)            :: 114
            Pseudo Genes (ambiguous residues) :: 0 of 114
            Pseudo Genes (frameshifted)       :: 43 of 114
            Pseudo Genes (incomplete)         :: 82 of 114
            Pseudo Genes (internal stop)      :: 19 of 114
            Pseudo Genes (multiple problems)  :: 25 of 114
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4996618
                     /organism="Enterobacter bugandensis"
                     /mol_type="genomic DNA"
                     /strain="nEC135"
                     /isolation_source="Stream water"
                     /db_xref="taxon:881260"
                     /geo_loc_name="Israel: Alexander River estuary"
                     /lat_lon="32.395 N 34.868 E"
                     /collection_date="2018-07"
                     /collected_by="Regev Cohen"
WGS         JADHKW010000001-JADHKW010000046
WGS_SCAFLD  NZ_JADHKW010000001-NZ_JADHKW010000046
//
LOCUS       NZ_JABXQA010000000   5054178 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter roggenkampii strain RHBSTW-00367, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABXQA000000000
VERSION     NZ_JABXQA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15148594
            Assembly: GCF_014101255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter roggenkampii
  ORGANISM  Enterobacter roggenkampii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 5054178)
  AUTHORS   AbuOun,M., Jones,H., Stubberfield,E., Gilson,D., Shaw,L.P.,
            Hubbard,A.T.M., Chau,K.K., Sebra,R., Peto,T.E.A., Crook,D.W.,
            Read,D.S., Gweon,H.S., Walker,A.S., Stoesser,N., Smith,R.P.,
            Anjum,M.F. and On Behalf Of The Rehab,Consortium.
  TITLE     A genomic epidemiological study shows that prevalence of
            antimicrobial resistance in Enterobacterales is associated with the
            livestock host, as well as antimicrobial usage
  JOURNAL   Microb Genom 7 (10) (2021)
   PUBMED   34609275
REFERENCE   2  (bases 1 to 5054178)
  AUTHORS   Shaw,L.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2020) Nuffield Department of Medicine, University
            of Oxford, John Radcliffe Hospital, Oxford OX3 9DU, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABXQA000000000.1.
            The Enterobacter roggenkampii whole genome shotgun (WGS) project
            has the project accession NZ_JABXQA000000000.  This version of the
            project (01) has the accession number NZ_JABXQA010000000, and
            consists of sequences JABXQA010000001-JABXQA010000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 114.91203910903x
            Sequencing Technology  :: Illumina; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_014101255.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:11:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,888
            CDSs (total)                      :: 4,770
            Genes (coding)                    :: 4,672
            CDSs (with protein)               :: 4,672
            Genes (RNA)                       :: 118
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 98
            CDSs (without protein)            :: 98
            Pseudo Genes (ambiguous residues) :: 0 of 98
            Pseudo Genes (frameshifted)       :: 31 of 98
            Pseudo Genes (incomplete)         :: 71 of 98
            Pseudo Genes (internal stop)      :: 13 of 98
            Pseudo Genes (multiple problems)  :: 14 of 98
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5054178
                     /organism="Enterobacter roggenkampii"
                     /mol_type="genomic DNA"
                     /strain="RHBSTW-00367"
                     /isolation_source="Wastewater influent sample"
                     /db_xref="taxon:1812935"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2017"
WGS         JABXQA010000001-JABXQA010000005
WGS_SCAFLD  NZ_JABXQA010000001-NZ_JABXQA010000005
//
LOCUS       NZ_JADHKV010000000   4935887 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter bugandensis strain nEC134, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JADHKV000000000
VERSION     NZ_JADHKV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13046970
            Assembly: GCF_015278715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter bugandensis
  ORGANISM  Enterobacter bugandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter.
REFERENCE   1  (bases 1 to 4935887)
  AUTHORS   Cohen,R., Paikin,S., Rokney,A., Rubin-Blum,M. and Astrahan,P.
  TITLE     Multidrug-resistant enterobacteriaceae in coastal water: an
            emerging threat
  JOURNAL   Antimicrob Resist Infect Control 9 (1), 169 (2020)
   PUBMED   33126924
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4935887)
  AUTHORS   Cohen,R., Paikin,S., Rokney,A., Rubin-,M. and Astrahan,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2019) Marine Biology, Israel Oceanographic and
            Limnological Research, Tel Shikmona, Haifa 3108000, Israel
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADHKV000000000.1.
            The Enterobacter bugandensis whole genome shotgun (WGS) project has
            the project accession NZ_JADHKV000000000.  This version of the
            project (01) has the accession number NZ_JADHKV010000000, and
            consists of sequences JADHKV010000001-JADHKV010000038.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_015278715.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:09:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,839
            CDSs (total)                      :: 4,741
            Genes (coding)                    :: 4,628
            CDSs (with protein)               :: 4,628
            Genes (RNA)                       :: 98
            rRNAs                             :: 7, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 3, 5 (16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 113
            CDSs (without protein)            :: 113
            Pseudo Genes (ambiguous residues) :: 0 of 113
            Pseudo Genes (frameshifted)       :: 42 of 113
            Pseudo Genes (incomplete)         :: 81 of 113
            Pseudo Genes (internal stop)      :: 21 of 113
            Pseudo Genes (multiple problems)  :: 25 of 113
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4935887
                     /organism="Enterobacter bugandensis"
                     /mol_type="genomic DNA"
                     /strain="nEC134"
                     /isolation_source="seawater"
                     /db_xref="taxon:881260"
                     /geo_loc_name="Israel: Beit Yanai beach"
                     /lat_lon="32.387 N 34.863 E"
                     /collection_date="2018-06"
                     /collected_by="Regev Cohen"
WGS         JADHKV010000001-JADHKV010000038
WGS_SCAFLD  NZ_JADHKV010000001-NZ_JADHKV010000038
//
LOCUS       NZ_JAIFNT010000000   2761528 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus lactis strain EF206, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAIFNT000000000
VERSION     NZ_JAIFNT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN20247408
            Assembly: GCF_019662365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus lactis
  ORGANISM  Enterococcus lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2761528)
  AUTHORS   Shridhar,P.B., Amachawadi,R.G., Tokach,M., Patel,I., Gangiredla,J.,
            Mammel,M. and Nagaraja,T.G.
  TITLE     Whole genome sequence analyses-based assessment of virulence
            potential and antimicrobial susceptibilities and resistance of
            Enterococcus faecium strains isolated from commercial swine and
            cattle probiotic products
  JOURNAL   J Anim Sci 100 (3) (2022)
   PUBMED   35150575
REFERENCE   2  (bases 1 to 2761528)
  AUTHORS   Shridhar,P.B., Amachawadi,R.G., Tokach,M., Patel,I., Gangiredla,J.
            and Nagaraja,T.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-JUL-2021) Clinical Sciences, Kansas State University,
            1800 Denison Avenue, Q221 Mosier Hall, Department of Clinical
            Sciences, College of Veterinary Medici, Manhattan, KS 66506, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIFNT000000000.1.
            The Enterococcus lactis whole genome shotgun (WGS) project has the
            project accession NZ_JAIFNT000000000.  This version of the project
            (01) has the accession number NZ_JAIFNT010000000, and consists of
            sequences JAIFNT010000001-JAIFNT010000106.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: JUL-2021
            Assembly Method        :: CLC NGS Cell v. 12.03
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_019662365.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:17:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,738
            CDSs (total)                      :: 2,676
            Genes (coding)                    :: 2,537
            CDSs (with protein)               :: 2,537
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 139
            CDSs (without protein)            :: 139
            Pseudo Genes (ambiguous residues) :: 0 of 139
            Pseudo Genes (frameshifted)       :: 51 of 139
            Pseudo Genes (incomplete)         :: 70 of 139
            Pseudo Genes (internal stop)      :: 34 of 139
            Pseudo Genes (multiple problems)  :: 16 of 139
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2761528
                     /organism="Enterococcus lactis"
                     /mol_type="genomic DNA"
                     /strain="EF206"
                     /isolation_source="Probiotic"
                     /db_xref="taxon:357441"
                     /geo_loc_name="USA: Manhattan, KS"
                     /lat_lon="39.1836 N 96.5717 W"
                     /collection_date="2016"
                     /collected_by="KSU"
WGS         JAIFNT010000001-JAIFNT010000106
WGS_SCAFLD  NZ_JAIFNT010000001-NZ_JAIFNT010000106
//
LOCUS       NZ_JABXRL010000000   4912348 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter hormaechei strain RHBSTW-00103, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABXRL000000000
VERSION     NZ_JABXRL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15148486
            Assembly: GCF_014104115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 4912348)
  AUTHORS   AbuOun,M., Jones,H., Stubberfield,E., Gilson,D., Shaw,L.P.,
            Hubbard,A.T.M., Chau,K.K., Sebra,R., Peto,T.E.A., Crook,D.W.,
            Read,D.S., Gweon,H.S., Walker,A.S., Stoesser,N., Smith,R.P.,
            Anjum,M.F. and On Behalf Of The Rehab,Consortium.
  TITLE     A genomic epidemiological study shows that prevalence of
            antimicrobial resistance in Enterobacterales is associated with the
            livestock host, as well as antimicrobial usage
  JOURNAL   Microb Genom 7 (10) (2021)
   PUBMED   34609275
REFERENCE   2  (bases 1 to 4912348)
  AUTHORS   Shaw,L.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2020) Nuffield Department of Medicine, University
            of Oxford, John Radcliffe Hospital, Oxford OX3 9DU, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABXRL000000000.1.
            The Enterobacter hormaechei whole genome shotgun (WGS) project has
            the project accession NZ_JABXRL000000000.  This version of the
            project (01) has the accession number NZ_JABXRL010000000, and
            consists of sequences JABXRL010000001-JABXRL010000010.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 116.571965610428x
            Sequencing Technology  :: Illumina; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_014104115.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:27:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,770
            CDSs (total)                      :: 4,658
            Genes (coding)                    :: 4,566
            CDSs (with protein)               :: 4,566
            Genes (RNA)                       :: 112
            rRNAs                             :: 7, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 32 of 92
            Pseudo Genes (incomplete)         :: 54 of 92
            Pseudo Genes (internal stop)      :: 21 of 92
            Pseudo Genes (multiple problems)  :: 13 of 92
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4912348
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="RHBSTW-00103"
                     /isolation_source="Freshwater sample from downstream of
                     wastewater treatment plant"
                     /db_xref="taxon:158836"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2017"
WGS         JABXRL010000001-JABXRL010000010
WGS_SCAFLD  NZ_JABXRL010000001-NZ_JABXRL010000010
//
LOCUS       NZ_JAGYRV010000000   5193021 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter bugandensis strain OpGen35, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAGYRV000000000
VERSION     NZ_JAGYRV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN18978550
            Assembly: GCF_022553555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter bugandensis
  ORGANISM  Enterobacter bugandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter.
REFERENCE   1  (bases 1 to 5193021)
  AUTHORS   Brazelton De Cardenas,J.N., Garner,C.D., Su,Y., Tang,L. and
            Hayden,R.T.
  TITLE     Comparative evaluation of Assays for Broad Detection of Molecular
            Resistance Mechanisms in Gram-negative Bacterial Isolates
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5193021)
  AUTHORS   Brazelton De Cardenas,J.N., Garner,C.D., Su,Y., Tang,L. and
            Hayden,R.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAY-2021) Pathology, St. Jude Children's Research
            Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGYRV000000000.1.
            The Enterobacter bugandensis whole genome shotgun (WGS) project has
            the project accession NZ_JAGYRV000000000.  This version of the
            project (01) has the accession number NZ_JAGYRV010000000, and
            consists of sequences JAGYRV010000001-JAGYRV010000221.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 106x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022553555.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:43:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,176
            CDSs (total)                      :: 5,096
            Genes (coding)                    :: 4,964
            CDSs (with protein)               :: 4,964
            Genes (RNA)                       :: 80
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 70
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 132
            CDSs (without protein)            :: 132
            Pseudo Genes (ambiguous residues) :: 2 of 132
            Pseudo Genes (frameshifted)       :: 34 of 132
            Pseudo Genes (incomplete)         :: 91 of 132
            Pseudo Genes (internal stop)      :: 17 of 132
            Pseudo Genes (multiple problems)  :: 11 of 132
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5193021
                     /organism="Enterobacter bugandensis"
                     /mol_type="genomic DNA"
                     /strain="OpGen35"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:881260"
                     /geo_loc_name="USA: Tennessee"
                     /lat_lon="35.1495 N 90.0490 W"
                     /collection_date="2016-11-02"
                     /collected_by="St. Jude Children's Research Hospital"
WGS         JAGYRV010000001-JAGYRV010000221
WGS_SCAFLD  NZ_JAGYRV010000001-NZ_JAGYRV010000221
//
LOCUS       NZ_JAJUKM010000000   2743083 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus lactis strain MG2-8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAJUKM000000000
VERSION     NZ_JAJUKM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN24518866
            Assembly: GCF_028888065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus lactis
  ORGANISM  Enterococcus lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2743083)
  AUTHORS   Liu,T., Wang,L. and Raisanguan,C.
  TITLE     Screening, identification, and complete genome sequencing of
            bacteriocin-producing Enterococcus lactis MG2-8 isolated from
            Mongolian dairy fermented products, and characteristics of its
            bacteriocin
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2743083)
  AUTHORS   Liu,T., Wang,L. and Raisanguan,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-DEC-2021) School of Food Science and Technology,
            Shanghai Ocean University, Lingang Avenue, Shanghai, Shanghai
            201306, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJUKM000000000.1.
            The Enterococcus lactis whole genome shotgun (WGS) project has the
            project accession NZ_JAJUKM000000000.  This version of the project
            (01) has the accession number NZ_JAJUKM010000000, and consists of
            sequences JAJUKM010000001-JAJUKM010000138.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Liping Wang.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 11-MAY-2021
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_028888065.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:36:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,762
            CDSs (total)                      :: 2,696
            Genes (coding)                    :: 2,558
            CDSs (with protein)               :: 2,558
            Genes (RNA)                       :: 66
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 138
            CDSs (without protein)            :: 138
            Pseudo Genes (ambiguous residues) :: 0 of 138
            Pseudo Genes (frameshifted)       :: 57 of 138
            Pseudo Genes (incomplete)         :: 56 of 138
            Pseudo Genes (internal stop)      :: 41 of 138
            Pseudo Genes (multiple problems)  :: 16 of 138
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2743083
                     /organism="Enterococcus lactis"
                     /mol_type="genomic DNA"
                     /strain="MG2-8"
                     /isolation_source="aaruul, traditional Mongolian dairy
                     product"
                     /db_xref="taxon:357441"
                     /geo_loc_name="Mongolia: Tuv Province"
                     /collection_date="2014-08-26"
WGS         JAJUKM010000001-JAJUKM010000138
WGS_SCAFLD  NZ_JAJUKM010000001-NZ_JAJUKM010000138
//
LOCUS       NZ_JANCIB010000000   2796567 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus hirae strain B-13, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JANCIB000000000
VERSION     NZ_JANCIB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN29514622
            Assembly: GCF_026204115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus hirae
  ORGANISM  Enterococcus hirae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2796567)
  AUTHORS   Huang,Z., Bai,Y., Wang,Q., Yang,X., Zhang,T., Chen,X. and Wang,H.
  TITLE     Persistence of transferable oxazolidinone resistance genes in
            enterococcal isolates from a swine farm in China
  JOURNAL   Front Microbiol 13, 1010513 (2022)
   PUBMED   36299730
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2796567)
  AUTHORS   Huang,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JUL-2022) College of Life Sciences, Sichuan
            University, Animal Disease Prevention and Food Safety Key
            Laboratory of Sichuan, Wangjiang Road 29#, ChengDu, SiChuan 610064,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JANCIB000000000.1.
            The Enterococcus hirae whole genome shotgun (WGS) project has the
            project accession NZ_JANCIB000000000.  This version of the project
            (01) has the accession number NZ_JANCIB010000000, and consists of
            sequences JANCIB010000001-JANCIB010000061.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_026204115.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:39:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,690
            CDSs (total)                      :: 2,619
            Genes (coding)                    :: 2,523
            CDSs (with protein)               :: 2,523
            Genes (RNA)                       :: 71
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 96
            CDSs (without protein)            :: 96
            Pseudo Genes (ambiguous residues) :: 0 of 96
            Pseudo Genes (frameshifted)       :: 40 of 96
            Pseudo Genes (incomplete)         :: 49 of 96
            Pseudo Genes (internal stop)      :: 22 of 96
            Pseudo Genes (multiple problems)  :: 14 of 96
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2796567
                     /organism="Enterococcus hirae"
                     /mol_type="genomic DNA"
                     /strain="B-13"
                     /isolation_source="fecal swab8"
                     /host="swine"
                     /db_xref="taxon:1354"
                     /geo_loc_name="China"
                     /collection_date="2021"
WGS         JANCIB010000001-JANCIB010000061
WGS_SCAFLD  NZ_JANCIB010000001-NZ_JANCIB010000061
//
LOCUS       NZ_JAKRNY010000000   4063665 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Elizabethkingia anophelis strain P6732, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAKRNY000000000
VERSION     NZ_JAKRNY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN25829857
            Assembly: GCF_029525635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Elizabethkingia anophelis
  ORGANISM  Elizabethkingia anophelis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Elizabethkingia.
REFERENCE   1  (bases 1 to 4063665)
  AUTHORS   Nascimento,A.P., Farias,B.O., Brito,A.S.G., Magaldi,M., Flores,C.,
            Montenegro,K., Bianco,K. and Clementino,M.
  TITLE     Industrial wastewater treatment plant as a hotspot for multidrug
            resistant Elizabethkingia anophelis spread
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4063665)
  AUTHORS   Nascimento,A.P., Farias,B.O., Brito,A.S.G., Magaldi,M., Flores,C.,
            Montenegro,K., Bianco,K. and Clementino,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-FEB-2022) Microbiology, Fiocruz, Avenida Brasil,
            4365, Rio de Janeiro, Rio de Janeiro 21040900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKRNY000000000.1.
            The Elizabethkingia anophelis whole genome shotgun (WGS) project
            has the project accession NZ_JAKRNY000000000.  This version of the
            project (01) has the accession number NZ_JAKRNY010000000, and
            consists of sequences JAKRNY010000001-JAKRNY010000075.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 148x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029525635.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:47:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,758
            Genes (coding)                    :: 3,734
            CDSs (with protein)               :: 3,734
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 6 of 24
            Pseudo Genes (incomplete)         :: 19 of 24
            Pseudo Genes (internal stop)      :: 3 of 24
            Pseudo Genes (multiple problems)  :: 3 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4063665
                     /organism="Elizabethkingia anophelis"
                     /mol_type="genomic DNA"
                     /strain="P6732"
                     /isolation_source="wastewater"
                     /db_xref="taxon:1117645"
                     /geo_loc_name="Brazil: Rio de Janeiro"
                     /collection_date="2019-05"
WGS         JAKRNY010000001-JAKRNY010000075
WGS_SCAFLD  NZ_JAKRNY010000001-NZ_JAKRNY010000075
//
LOCUS       NZ_JABXPS010000000   5074538 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter roggenkampii strain RHBSTW-00630, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABXPS000000000
VERSION     NZ_JABXPS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15148668
            Assembly: GCF_014103425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter roggenkampii
  ORGANISM  Enterobacter roggenkampii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 5074538)
  AUTHORS   AbuOun,M., Jones,H., Stubberfield,E., Gilson,D., Shaw,L.P.,
            Hubbard,A.T.M., Chau,K.K., Sebra,R., Peto,T.E.A., Crook,D.W.,
            Read,D.S., Gweon,H.S., Walker,A.S., Stoesser,N., Smith,R.P.,
            Anjum,M.F. and On Behalf Of The Rehab,Consortium.
  TITLE     A genomic epidemiological study shows that prevalence of
            antimicrobial resistance in Enterobacterales is associated with the
            livestock host, as well as antimicrobial usage
  JOURNAL   Microb Genom 7 (10) (2021)
   PUBMED   34609275
REFERENCE   2  (bases 1 to 5074538)
  AUTHORS   Shaw,L.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2020) Nuffield Department of Medicine, University
            of Oxford, John Radcliffe Hospital, Oxford OX3 9DU, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABXPS000000000.1.
            The Enterobacter roggenkampii whole genome shotgun (WGS) project
            has the project accession NZ_JABXPS000000000.  This version of the
            project (01) has the accession number NZ_JABXPS010000000, and
            consists of sequences JABXPS010000001-JABXPS010000009.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 94.0579586484841x
            Sequencing Technology  :: Illumina; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_014103425.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:50:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,986
            CDSs (total)                      :: 4,871
            Genes (coding)                    :: 4,742
            CDSs (with protein)               :: 4,742
            Genes (RNA)                       :: 115
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 129
            CDSs (without protein)            :: 129
            Pseudo Genes (ambiguous residues) :: 0 of 129
            Pseudo Genes (frameshifted)       :: 52 of 129
            Pseudo Genes (incomplete)         :: 71 of 129
            Pseudo Genes (internal stop)      :: 23 of 129
            Pseudo Genes (multiple problems)  :: 16 of 129
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5074538
                     /organism="Enterobacter roggenkampii"
                     /mol_type="genomic DNA"
                     /strain="RHBSTW-00630"
                     /isolation_source="Wastewater influent sample"
                     /db_xref="taxon:1812935"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2017"
WGS         JABXPS010000001-JABXPS010000009
WGS_SCAFLD  NZ_JABXPS010000001-NZ_JABXPS010000009
//
LOCUS       NZ_JAHTWJ010000000   5027010 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter asburiae strain Q0180, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAHTWJ000000000
VERSION     NZ_JAHTWJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN19728234
            Assembly: GCF_025536595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter asburiae
  ORGANISM  Enterobacter asburiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 5027010)
  AUTHORS   Abdallah,R., Kuete Yimagou,E., Hadjadj,L., Mediannikov,O.,
            Ibrahim,A., Davoust,B., Barciela,A., Hernandez-Aguilar,R.A.,
            Diatta,G., Sokhna,C., Raoult,D., Rolain,J.M. and Baron,S.A.
  TITLE     Population Diversity of Antibiotic Resistant Enterobacterales in
            Samples From Wildlife Origin in Senegal: Identification of a
            Multidrug Resistance Transposon Carrying blaCTX-M-15 in Escherichia
            coli
  JOURNAL   Front Microbiol 13, 838392 (2022)
   PUBMED   35369484
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5027010)
  AUTHORS   Abdallah,R., Kuete Yimagou,E., Hadjadj,L., Mediannikov,O.,
            Ibrahim,A., Davoust,B., Barciela,A., Hernandez-Aguilar,R.A.,
            Diatta,G., Sokhna,C., Raoult,D., Rolain,J.-M. and Baron,S.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2021) MEPHI, IHU Mediterranee Infection, 19-21 Bd
            Jean Moulin, Marseille 13005, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAHTWJ000000000.1.
            The Enterobacter asburiae whole genome shotgun (WGS) project has
            the project accession NZ_JAHTWJ000000000.  This version of the
            project (01) has the accession number NZ_JAHTWJ010000000, and
            consists of sequences JAHTWJ010000001-JAHTWJ010000163.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0+galaxy1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 70x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_025536595.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:50:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,003
            CDSs (total)                      :: 4,929
            Genes (coding)                    :: 4,834
            CDSs (with protein)               :: 4,834
            Genes (RNA)                       :: 74
            rRNAs                             :: 1, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 8, 4 (16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 95
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 28 of 95
            Pseudo Genes (incomplete)         :: 69 of 95
            Pseudo Genes (internal stop)      :: 11 of 95
            Pseudo Genes (multiple problems)  :: 10 of 95
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5027010
                     /organism="Enterobacter asburiae"
                     /mol_type="genomic DNA"
                     /strain="Q0180"
                     /isolation_source="fecal sample"
                     /host="Papio papio"
                     /db_xref="taxon:61645"
                     /geo_loc_name="Senegal: Niokolo-Koba National Park"
                     /collection_date="2015-06"
WGS         JAHTWJ010000001-JAHTWJ010000163
WGS_SCAFLD  NZ_JAHTWJ010000001-NZ_JAHTWJ010000163
//
LOCUS       NZ_JAKRNW010000000   4129810 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Elizabethkingia anophelis strain P6744, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAKRNW000000000
VERSION     NZ_JAKRNW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN25829859
            Assembly: GCF_029525585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Elizabethkingia anophelis
  ORGANISM  Elizabethkingia anophelis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Elizabethkingia.
REFERENCE   1  (bases 1 to 4129810)
  AUTHORS   Nascimento,A.P., Farias,B.O., Brito,A.S.G., Magaldi,M., Flores,C.,
            Montenegro,K., Bianco,K. and Clementino,M.
  TITLE     Industrial wastewater treatment plant as a hotspot for multidrug
            resistant Elizabethkingia anophelis spread
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4129810)
  AUTHORS   Nascimento,A.P., Farias,B.O., Brito,A.S.G., Magaldi,M., Flores,C.,
            Montenegro,K., Bianco,K. and Clementino,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-FEB-2022) Microbiology, Fiocruz, Avenida Brasil,
            4365, Rio de Janeiro, Rio de Janeiro 21040900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKRNW000000000.1.
            The Elizabethkingia anophelis whole genome shotgun (WGS) project
            has the project accession NZ_JAKRNW000000000.  This version of the
            project (01) has the accession number NZ_JAKRNW010000000, and
            consists of sequences JAKRNW010000001-JAKRNW010000035.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 191x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029525585.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:43:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,853
            CDSs (total)                      :: 3,806
            Genes (coding)                    :: 3,785
            CDSs (with protein)               :: 3,785
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 6 of 21
            Pseudo Genes (incomplete)         :: 15 of 21
            Pseudo Genes (internal stop)      :: 4 of 21
            Pseudo Genes (multiple problems)  :: 3 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4129810
                     /organism="Elizabethkingia anophelis"
                     /mol_type="genomic DNA"
                     /strain="P6744"
                     /isolation_source="wastewater"
                     /db_xref="taxon:1117645"
                     /geo_loc_name="Brazil: Rio de Janeiro"
                     /collection_date="2020-02"
WGS         JAKRNW010000001-JAKRNW010000035
WGS_SCAFLD  NZ_JAKRNW010000001-NZ_JAKRNW010000035
//
LOCUS       NZ_JAKMIR010000000   5322970 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter cloacae strain 12852, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAKMIR000000000
VERSION     NZ_JAKMIR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN25419425
            Assembly: GCF_023154715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter cloacae
  ORGANISM  Enterobacter cloacae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 5322970)
  AUTHORS   Liao,W., Cui,Y., Quan,J., Zhao,D., Han,X., Shi,Q., Wang,Q.,
            Jiang,Y., Du,X., Li,X. and Yu,Y.
  TITLE     High prevalence of colistin resistance and mcr-9/10 genes in
            Enterobacter spp. in a tertiary hospital over a decade
  JOURNAL   Int J Antimicrob Agents 59 (5), 106573 (2022)
   PUBMED   35307563
REFERENCE   2  (bases 1 to 5322970)
  AUTHORS   Liao,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JAN-2022) Infectious Diseases, Sir Run Run Shaw
            Hospital, 3# East Qingchun Road, Hangzhou, Zhejiang 310016, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKMIR000000000.1.
            The Enterobacter cloacae whole genome shotgun (WGS) project has the
            project accession NZ_JAKMIR000000000.  This version of the project
            (01) has the accession number NZ_JAKMIR010000000, and consists of
            sequences JAKMIR010000001-JAKMIR010000095.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. 0.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_023154715.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:56:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,236
            CDSs (total)                      :: 5,134
            Genes (coding)                    :: 5,049
            CDSs (with protein)               :: 5,049
            Genes (RNA)                       :: 102
            rRNAs                             :: 7, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5, 2 (5S, 16S)
            tRNAs                             :: 84
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 85
            CDSs (without protein)            :: 85
            Pseudo Genes (ambiguous residues) :: 0 of 85
            Pseudo Genes (frameshifted)       :: 21 of 85
            Pseudo Genes (incomplete)         :: 64 of 85
            Pseudo Genes (internal stop)      :: 15 of 85
            Pseudo Genes (multiple problems)  :: 13 of 85
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5322970
                     /organism="Enterobacter cloacae"
                     /mol_type="genomic DNA"
                     /strain="12852"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:550"
                     /geo_loc_name="China"
                     /lat_lon="29.86 N 121.56 E"
                     /collection_date="2012"
                     /collected_by="Yushan Cui"
WGS         JAKMIR010000001-JAKMIR010000095
WGS_SCAFLD  NZ_JAKMIR010000001-NZ_JAKMIR010000095
//
LOCUS       NZ_JAOCAP010000000   5164265 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter bugandensis strain GD03936, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAOCAP000000000
VERSION     NZ_JAOCAP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN30525392
            Assembly: GCF_029839425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter bugandensis
  ORGANISM  Enterobacter bugandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter.
REFERENCE   1  (bases 1 to 5164265)
  AUTHORS   Diorio-Toth,L.
  TITLE     Intensive care unit water sources are persistently colonized with
            multi-drug resistant bacteria and are the site of extensive
            horizontal gene transfer of antibiotic resistance genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5164265)
  AUTHORS   Diorio-Toth,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-SEP-2022) Computational and Systems Biology,
            Washington University in St. Louis School of Medicine, 660 S Euclid
            Ave, St. Louis, MO 63110, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAOCAP000000000.1.
            The Enterobacter bugandensis whole genome shotgun (WGS) project has
            the project accession NZ_JAOCAP000000000.  This version of the
            project (01) has the accession number NZ_JAOCAP010000000, and
            consists of sequences JAOCAP010000001-JAOCAP010000092.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 149.991x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029839425.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:29:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,094
            CDSs (total)                      :: 5,016
            Genes (coding)                    :: 4,909
            CDSs (with protein)               :: 4,909
            Genes (RNA)                       :: 78
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 107
            CDSs (without protein)            :: 107
            Pseudo Genes (ambiguous residues) :: 0 of 107
            Pseudo Genes (frameshifted)       :: 44 of 107
            Pseudo Genes (incomplete)         :: 72 of 107
            Pseudo Genes (internal stop)      :: 14 of 107
            Pseudo Genes (multiple problems)  :: 20 of 107
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5164265
                     /organism="Enterobacter bugandensis"
                     /mol_type="genomic DNA"
                     /strain="GD03936"
                     /isolation_source="surface swab"
                     /db_xref="taxon:881260"
                     /geo_loc_name="Pakistan"
                     /collection_date="2018-05-01"
WGS         JAOCAP010000001-JAOCAP010000092
WGS_SCAFLD  NZ_JAOCAP010000001-NZ_JAOCAP010000092
//
LOCUS       NZ_JAJTOV010000000   5045907 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter hormaechei strain TUECL19002, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJTOV000000000
VERSION     NZ_JAJTOV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN24425236
            Assembly: GCF_021341795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 5045907)
  AUTHORS   Chen,C.M., Chen,B.H., Hong,Y.P. and Tang,H.L.
  TITLE     The emergence of mcr-9 and carbapenemase gene co-harboring
            Enterobacter hormaechei in Taiwan
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5045907)
  AUTHORS   Chen,C.M., Chen,B.H., Hong,Y.P. and Tang,H.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-DEC-2021) Microbiology and Immunology, China Medical
            University, No. 91, Xueshi Road, Taichung 40402, Taiwan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJTOV000000000.1.
            The Enterobacter hormaechei whole genome shotgun (WGS) project has
            the project accession NZ_JAJTOV000000000.  This version of the
            project (01) has the accession number NZ_JAJTOV010000000, and
            consists of sequences JAJTOV010000001-JAJTOV010000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021341795.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:19:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,896
            CDSs (total)                      :: 4,780
            Genes (coding)                    :: 4,694
            CDSs (with protein)               :: 4,694
            Genes (RNA)                       :: 116
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 86
            CDSs (without protein)            :: 86
            Pseudo Genes (ambiguous residues) :: 0 of 86
            Pseudo Genes (frameshifted)       :: 29 of 86
            Pseudo Genes (incomplete)         :: 58 of 86
            Pseudo Genes (internal stop)      :: 14 of 86
            Pseudo Genes (multiple problems)  :: 13 of 86
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5045907
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="TUECL19002"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:158836"
                     /geo_loc_name="Taiwan: Taichung"
                     /lat_lon="24.24 N 120.54 E"
                     /collection_date="2018-04-10"
                     /collected_by="Tungs' Taichung MetroHarbor Hospital
                     (TTMHH)"
WGS         JAJTOV010000001-JAJTOV010000005
WGS_SCAFLD  NZ_JAJTOV010000001-NZ_JAJTOV010000005
//
LOCUS       NZ_JBMPAE010000000   4903316 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter asburiae strain 10454_B, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBMPAE000000000
VERSION     NZ_JBMPAE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47597756
            Assembly: GCF_049320325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter asburiae
  ORGANISM  Enterobacter asburiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 4903316)
  AUTHORS   Sedlakova,M.H., Fiserova,K. and Mlynarcik,P.
  TITLE     Resistance to colistin in a tertiary hospital, Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4903316)
  AUTHORS   Mlynarcik,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2025) Department of Microbiology, Palacky
            University Olomouc, Hnevotinska 3, Olomouc 775 15, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBMPAE000000000.1.
            The Enterobacter asburiae whole genome shotgun (WGS) project has
            the project accession NZ_JBMPAE000000000.  This version of the
            project (01) has the accession number NZ_JBMPAE010000000, and
            consists of sequences JBMPAE010000001-JBMPAE010000114.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049320325.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:06:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,829
            CDSs (total)                      :: 4,736
            Genes (coding)                    :: 4,631
            CDSs (with protein)               :: 4,631
            Genes (RNA)                       :: 93
            rRNAs                             :: 3, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 4, 3 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 29 of 105
            Pseudo Genes (incomplete)         :: 74 of 105
            Pseudo Genes (internal stop)      :: 13 of 105
            Pseudo Genes (multiple problems)  :: 10 of 105
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4903316
                     /organism="Enterobacter asburiae"
                     /mol_type="genomic DNA"
                     /strain="10454_B"
                     /isolation_source="Clinical sample from a hospital
                     setting"
                     /host="Homo sapiens"
                     /db_xref="taxon:61645"
                     /geo_loc_name="Czech Republic: Olomouc (Institute of
                     Microbiology, Faculty of Medicine, UPOL)"
                     /collection_date="2018-01-01/2024-12-31"
WGS         JBMPAE010000001-JBMPAE010000114
WGS_SCAFLD  NZ_JBMPAE010000001-NZ_JBMPAE010000114
//
LOCUS       NZ_JARNAN010000000   2911996 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus hirae strain Y15, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARNAN000000000
VERSION     NZ_JARNAN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN33794046
            Assembly: GCF_038436855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus hirae
  ORGANISM  Enterococcus hirae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2911996)
  AUTHORS   Yang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAR-2023) College of Life Sciences, Sichuan
            University, Wangjiang, Chengdu 610065, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARNAN000000000.1.
            The Enterococcus hirae whole genome shotgun (WGS) project has the
            project accession NZ_JARNAN000000000.  This version of the project
            (01) has the accession number NZ_JARNAN010000000, and consists of
            sequences JARNAN010000001-JARNAN010000049.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038436855.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:36:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,686
            CDSs (total)                      :: 2,615
            Genes (coding)                    :: 2,564
            CDSs (with protein)               :: 2,564
            Genes (RNA)                       :: 71
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 22 of 51
            Pseudo Genes (incomplete)         :: 36 of 51
            Pseudo Genes (internal stop)      :: 8 of 51
            Pseudo Genes (multiple problems)  :: 12 of 51
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2911996
                     /organism="Enterococcus hirae"
                     /mol_type="genomic DNA"
                     /strain="Y15"
                     /db_xref="taxon:1354"
                     /geo_loc_name="China: Anhui"
                     /collection_date="2021-09"
WGS         JARNAN010000001-JARNAN010000049
WGS_SCAFLD  NZ_JARNAN010000001-NZ_JARNAN010000049
//
LOCUS       NZ_JARMZX010000000   2941035 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain Y32, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARMZX000000000
VERSION     NZ_JARMZX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN33794062
            Assembly: GCF_038436325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2941035)
  AUTHORS   Yang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAR-2023) College of Life Sciences, Sichuan
            University, Wangjiang, Chengdu 610065, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARMZX000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JARMZX000000000.  This version of the project
            (01) has the accession number NZ_JARMZX010000000, and consists of
            sequences JARMZX010000001-JARMZX010000072.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038436325.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:39:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,929
            CDSs (total)                      :: 2,860
            Genes (coding)                    :: 2,775
            CDSs (with protein)               :: 2,775
            Genes (RNA)                       :: 69
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 85
            CDSs (without protein)            :: 85
            Pseudo Genes (ambiguous residues) :: 0 of 85
            Pseudo Genes (frameshifted)       :: 24 of 85
            Pseudo Genes (incomplete)         :: 61 of 85
            Pseudo Genes (internal stop)      :: 14 of 85
            Pseudo Genes (multiple problems)  :: 12 of 85
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2941035
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="Y32"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Chongqing"
                     /collection_date="2021-09"
WGS         JARMZX010000001-JARMZX010000072
WGS_SCAFLD  NZ_JARMZX010000001-NZ_JARMZX010000072
//
LOCUS       NZ_JARNAG010000000   2928591 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus faecium strain Y22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARNAG000000000
VERSION     NZ_JARNAG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN33794053
            Assembly: GCF_038436505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2928591)
  AUTHORS   Yang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAR-2023) College of Life Sciences, Sichuan
            University, Wangjiang, Chengdu 610065, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARNAG000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JARNAG000000000.  This version of the project
            (01) has the accession number NZ_JARNAG010000000, and consists of
            sequences JARNAG010000001-JARNAG010000074.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038436505.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:37:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,916
            CDSs (total)                      :: 2,847
            Genes (coding)                    :: 2,764
            CDSs (with protein)               :: 2,764
            Genes (RNA)                       :: 69
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 83
            CDSs (without protein)            :: 83
            Pseudo Genes (ambiguous residues) :: 0 of 83
            Pseudo Genes (frameshifted)       :: 23 of 83
            Pseudo Genes (incomplete)         :: 59 of 83
            Pseudo Genes (internal stop)      :: 14 of 83
            Pseudo Genes (multiple problems)  :: 11 of 83
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2928591
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="Y22"
                     /db_xref="taxon:1352"
                     /geo_loc_name="China: Chongqing"
                     /collection_date="2021-09"
WGS         JARNAG010000001-JARNAG010000074
WGS_SCAFLD  NZ_JARNAG010000001-NZ_JARNAG010000074
//
LOCUS       NZ_JBNBOZ010000000   4931795 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter asburiae strain 1961, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBNBOZ000000000
VERSION     NZ_JBNBOZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47331981
            Assembly: GCF_049727005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter asburiae
  ORGANISM  Enterobacter asburiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 4931795)
  AUTHORS   Alanbari,N., Amoura,A., Guerin,F., Cosson,G., Pistien,C.,
            Magreault,S., El Meouche,I., Lefort,A., Fantin,B., Cattoir,V. and
            De Lastours,V.
  TITLE     Temocillin Efficacy and Emergence of Resistance in Enterobacter
            cloacae Complex in a Murine Peritonitis Model
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4931795)
  AUTHORS   Alanbari,N., Amoura,A., Guerin,F., Cosson,G., Pistien,C.,
            Magreault,S., El Meouche,I., Lefort,A., Fantin,B., Cattoir,V. and
            De Lastours,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2025) U1230, University of Rennes, 2 Avenue du
            Professeur Leon Bernard, Rennes 35043, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNBOZ000000000.1.
            The Enterobacter asburiae whole genome shotgun (WGS) project has
            the project accession NZ_JBNBOZ000000000.  This version of the
            project (01) has the accession number NZ_JBNBOZ010000000, and
            consists of sequences JBNBOZ010000001-JBNBOZ010000076.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 136x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049727005.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:10:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,941
            CDSs (total)                      :: 4,831
            Genes (coding)                    :: 4,740
            CDSs (with protein)               :: 4,740
            Genes (RNA)                       :: 110
            rRNAs                             :: 9, 5, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 4, 7 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 27 of 91
            Pseudo Genes (incomplete)         :: 53 of 91
            Pseudo Genes (internal stop)      :: 19 of 91
            Pseudo Genes (multiple problems)  :: 7 of 91
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4931795
                     /organism="Enterobacter asburiae"
                     /mol_type="genomic DNA"
                     /strain="1961"
                     /isolation_source="Peritoneal fluid"
                     /host="Mus musculus"
                     /db_xref="taxon:61645"
                     /geo_loc_name="France: Paris"
                     /collection_date="2024-05"
                     /collected_by="INSERM UMR-1137 IAME"
WGS         JBNBOZ010000001-JBNBOZ010000076
WGS_SCAFLD  NZ_JBNBOZ010000001-NZ_JBNBOZ010000076
//
LOCUS       NZ_JBEGHO010000000   4893375 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter ludwigii strain LME3-1-1.1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBEGHO000000000
VERSION     NZ_JBEGHO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37150069
            Assembly: GCF_040676275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter ludwigii
  ORGANISM  Enterobacter ludwigii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 4893375)
  AUTHORS   Thoenen,L., Giroud,C., Kreuzer,M., Waelchli,J., Gfeller,V.,
            Deslandes-Herold,G., Mateo,P., Robert,C.A.M., Ahrens,C.H.,
            Rubio-Somoza,I., Bruggmann,R., Erb,M. and Schlaeppi,K.
  TITLE     Bacterial tolerance to host-exuded specialized metabolites
            structures the maize root microbiome
  JOURNAL   Proc Natl Acad Sci U S A 120 (44), e2310134120 (2023)
   PUBMED   37878725
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2024 Jan 9;121(2):e2321411121.
            doi: 10.1073/pnas.2321411121. PMID: 38181060]
REFERENCE   2  (bases 1 to 4893375)
  AUTHORS   Kreuzer,M., Schlaeppi,K. and Thoenen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2024) Interfaculty Bioinformatics Unit,
            University of Bern, Baltzerstrasse 6, Bern, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBEGHO000000000.1.
            The Enterobacter ludwigii whole genome shotgun (WGS) project has
            the project accession NZ_JBEGHO000000000.  This version of the
            project (01) has the accession number NZ_JBEGHO010000000, and
            consists of sequences JBEGHO010000001-JBEGHO010000044.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 69x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_040676275.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:48:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,741
            CDSs (total)                      :: 4,623
            Genes (coding)                    :: 4,564
            CDSs (with protein)               :: 4,564
            Genes (RNA)                       :: 118
            rRNAs                             :: 9, 7, 17 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 16S)
            partial rRNAs                     :: 3, 6, 17 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 28 of 59
            Pseudo Genes (incomplete)         :: 43 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 21 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4893375
                     /organism="Enterobacter ludwigii"
                     /mol_type="genomic DNA"
                     /strain="LME3-1-1.1"
                     /host="Zea mays"
                     /db_xref="taxon:299767"
                     /geo_loc_name="Switzerland"
                     /collection_date="2019-05"
WGS         JBEGHO010000001-JBEGHO010000044
WGS_SCAFLD  NZ_JBEGHO010000001-NZ_JBEGHO010000044
//
LOCUS       NZ_JBXGHD010000000   2069616 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Desemzia incerta isolate OUG7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGHD000000000
VERSION     NZ_JBXGHD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44800781
            Assembly: GCF_056855285.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Desemzia incerta (eye metagenome)
  ORGANISM  Desemzia incerta
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Desemzia.
REFERENCE   1  (bases 1 to 2069616)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Metagenome-assembled genomes from the bovine ocular surface
            microbiome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2069616)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGHD000000000.1.
            The Desemzia incerta whole genome shotgun (WGS) project has the
            project accession NZ_JBXGHD000000000.  This version of the project
            (01) has the accession number NZ_JBXGHD010000000, and consists of
            sequences JBXGHD010000001-JBXGHD010000291.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-FEB-2024
            Assembly Method        :: Megahit v. 1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7.1335664x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855285.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:14:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,094
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 41
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 3 of 71
            Pseudo Genes (incomplete)         :: 56 of 71
            Pseudo Genes (internal stop)      :: 12 of 71
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069616
                     /organism="Desemzia incerta"
                     /mol_type="genomic DNA"
                     /isolate="OUG7"
                     /isolation_source="ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:82801"
                     /environmental_sample
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2023"
                     /metagenome_source="eye metagenome"
                     /metagenomic
WGS         JBXGHD010000001-JBXGHD010000291
WGS_SCAFLD  NZ_JBXGHD010000001-NZ_JBXGHD010000291
//
LOCUS       NZ_JBEGHF010000000   4749774 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter ludwigii strain LMZ1-1-1.1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBEGHF000000000
VERSION     NZ_JBEGHF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37150093
            Assembly: GCF_040675815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter ludwigii
  ORGANISM  Enterobacter ludwigii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 4749774)
  AUTHORS   Thoenen,L., Giroud,C., Kreuzer,M., Waelchli,J., Gfeller,V.,
            Deslandes-Herold,G., Mateo,P., Robert,C.A.M., Ahrens,C.H.,
            Rubio-Somoza,I., Bruggmann,R., Erb,M. and Schlaeppi,K.
  TITLE     Bacterial tolerance to host-exuded specialized metabolites
            structures the maize root microbiome
  JOURNAL   Proc Natl Acad Sci U S A 120 (44), e2310134120 (2023)
   PUBMED   37878725
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2024 Jan 9;121(2):e2321411121.
            doi: 10.1073/pnas.2321411121. PMID: 38181060]
REFERENCE   2  (bases 1 to 4749774)
  AUTHORS   Kreuzer,M., Schlaeppi,K. and Thoenen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2024) Interfaculty Bioinformatics Unit,
            University of Bern, Baltzerstrasse 6, Bern, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBEGHF000000000.1.
            The Enterobacter ludwigii whole genome shotgun (WGS) project has
            the project accession NZ_JBEGHF000000000.  This version of the
            project (01) has the accession number NZ_JBEGHF010000000, and
            consists of sequences JBEGHF010000001-JBEGHF010000038.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 99x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_040675815.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:55:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,616
            CDSs (total)                      :: 4,497
            Genes (coding)                    :: 4,440
            CDSs (with protein)               :: 4,440
            Genes (RNA)                       :: 119
            rRNAs                             :: 10, 10, 14 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 3, 10, 14 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 25 of 57
            Pseudo Genes (incomplete)         :: 44 of 57
            Pseudo Genes (internal stop)      :: 9 of 57
            Pseudo Genes (multiple problems)  :: 19 of 57
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4749774
                     /organism="Enterobacter ludwigii"
                     /mol_type="genomic DNA"
                     /strain="LMZ1-1-1.1"
                     /host="Zea mays"
                     /db_xref="taxon:299767"
                     /geo_loc_name="Switzerland"
                     /collection_date="2019-05"
WGS         JBEGHF010000001-JBEGHF010000038
WGS_SCAFLD  NZ_JBEGHF010000001-NZ_JBEGHF010000038
//
LOCUS       NZ_JBMOZX010000000   5048772 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter asburiae strain 18996_B, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBMOZX000000000
VERSION     NZ_JBMOZX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47597763
            Assembly: GCF_049322015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter asburiae
  ORGANISM  Enterobacter asburiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 5048772)
  AUTHORS   Sedlakova,M.H., Fiserova,K. and Mlynarcik,P.
  TITLE     Resistance to colistin in a tertiary hospital, Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5048772)
  AUTHORS   Mlynarcik,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2025) Department of Microbiology, Palacky
            University Olomouc, Hnevotinska 3, Olomouc 775 15, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBMOZX000000000.1.
            The Enterobacter asburiae whole genome shotgun (WGS) project has
            the project accession NZ_JBMOZX000000000.  This version of the
            project (01) has the accession number NZ_JBMOZX010000000, and
            consists of sequences JBMOZX010000001-JBMOZX010000113.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049322015.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:09:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,990
            CDSs (total)                      :: 4,901
            Genes (coding)                    :: 4,796
            CDSs (with protein)               :: 4,796
            Genes (RNA)                       :: 89
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 23 of 105
            Pseudo Genes (incomplete)         :: 80 of 105
            Pseudo Genes (internal stop)      :: 15 of 105
            Pseudo Genes (multiple problems)  :: 10 of 105
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5048772
                     /organism="Enterobacter asburiae"
                     /mol_type="genomic DNA"
                     /strain="18996_B"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:61645"
                     /geo_loc_name="Czech Republic: Olomouc (Institute of
                     Microbiology, Faculty of Medicine, UPOL)"
                     /collection_date="2018-01-01/2024-12-31"
WGS         JBMOZX010000001-JBMOZX010000113
WGS_SCAFLD  NZ_JBMOZX010000001-NZ_JBMOZX010000113
//
LOCUS       NZ_JBMOZO010000000   4905269 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter asburiae strain 16384_A, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBMOZO000000000
VERSION     NZ_JBMOZO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47597772
            Assembly: GCF_049321715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter asburiae
  ORGANISM  Enterobacter asburiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 4905269)
  AUTHORS   Sedlakova,M.H., Fiserova,K. and Mlynarcik,P.
  TITLE     Resistance to colistin in a tertiary hospital, Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4905269)
  AUTHORS   Mlynarcik,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2025) Department of Microbiology, Palacky
            University Olomouc, Hnevotinska 3, Olomouc 775 15, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBMOZO000000000.1.
            The Enterobacter asburiae whole genome shotgun (WGS) project has
            the project accession NZ_JBMOZO000000000.  This version of the
            project (01) has the accession number NZ_JBMOZO010000000, and
            consists of sequences JBMOZO010000001-JBMOZO010000125.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049321715.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:08:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,836
            CDSs (total)                      :: 4,749
            Genes (coding)                    :: 4,648
            CDSs (with protein)               :: 4,648
            Genes (RNA)                       :: 87
            rRNAs                             :: 2, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 101
            CDSs (without protein)            :: 101
            Pseudo Genes (ambiguous residues) :: 0 of 101
            Pseudo Genes (frameshifted)       :: 21 of 101
            Pseudo Genes (incomplete)         :: 75 of 101
            Pseudo Genes (internal stop)      :: 15 of 101
            Pseudo Genes (multiple problems)  :: 8 of 101
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4905269
                     /organism="Enterobacter asburiae"
                     /mol_type="genomic DNA"
                     /strain="16384_A"
                     /isolation_source="Endosecretion"
                     /host="Homo sapiens"
                     /db_xref="taxon:61645"
                     /geo_loc_name="Czech Republic: Olomouc (Institute of
                     Microbiology, Faculty of Medicine, UPOL)"
                     /collection_date="2018-01-01/2024-12-31"
WGS         JBMOZO010000001-JBMOZO010000125
WGS_SCAFLD  NZ_JBMOZO010000001-NZ_JBMOZO010000125
//
LOCUS       NZ_JBMPAQ010000000   4995904 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter asburiae strain 23097_B, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBMPAQ000000000
VERSION     NZ_JBMPAQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47597745
            Assembly: GCF_049322115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter asburiae
  ORGANISM  Enterobacter asburiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 4995904)
  AUTHORS   Sedlakova,M.H., Fiserova,K. and Mlynarcik,P.
  TITLE     Resistance to colistin in a tertiary hospital, Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4995904)
  AUTHORS   Mlynarcik,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2025) Department of Microbiology, Palacky
            University Olomouc, Hnevotinska 3, Olomouc 775 15, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBMPAQ000000000.1.
            The Enterobacter asburiae whole genome shotgun (WGS) project has
            the project accession NZ_JBMPAQ000000000.  This version of the
            project (01) has the accession number NZ_JBMPAQ010000000, and
            consists of sequences JBMPAQ010000001-JBMPAQ010000088.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049322115.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:16:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,942
            CDSs (total)                      :: 4,859
            Genes (coding)                    :: 4,760
            CDSs (with protein)               :: 4,760
            Genes (RNA)                       :: 83
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 99
            CDSs (without protein)            :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 24 of 99
            Pseudo Genes (incomplete)         :: 74 of 99
            Pseudo Genes (internal stop)      :: 16 of 99
            Pseudo Genes (multiple problems)  :: 12 of 99
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4995904
                     /organism="Enterobacter asburiae"
                     /mol_type="genomic DNA"
                     /strain="23097_B"
                     /isolation_source="Clinical sample from a hospital
                     setting"
                     /host="Homo sapiens"
                     /db_xref="taxon:61645"
                     /geo_loc_name="Czech Republic: Olomouc (Institute of
                     Microbiology, Faculty of Medicine, UPOL)"
                     /collection_date="2018-01-01/2024-12-31"
WGS         JBMPAQ010000001-JBMPAQ010000088
WGS_SCAFLD  NZ_JBMPAQ010000001-NZ_JBMPAQ010000088
//
LOCUS       NZ_JBXGJD010000000   2148632 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Corynebacterium sp. isolate SUG3750, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGJD000000000
VERSION     NZ_JBXGJD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52836068
            Sequence Read Archive: SRR21357710
            Assembly: GCF_056857295.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Corynebacterium sp. (milk metagenome)
  ORGANISM  Corynebacterium sp.
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2148632)
  AUTHORS   Holman,D.B., Gzyl,K.E. and Kommadath,A.
  TITLE     Metagenome-assembled genomes from sow colostrum and milk
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2148632)
  AUTHORS   Holman,D.B., Gzyl,K.E. and Kommadath,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-NOV-2025) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGJD000000000.1.
            The Corynebacterium sp. whole genome shotgun (WGS) project has the
            project accession NZ_JBXGJD000000000.  This version of the project
            (01) has the accession number NZ_JBXGJD010000000, and consists of
            sequences JBXGJD010000001-JBXGJD010000232.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v.1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12.4x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857295.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:20:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,184
            CDSs (total)                      :: 2,130
            Genes (coding)                    :: 2,035
            CDSs (with protein)               :: 2,035
            Genes (RNA)                       :: 54
            rRNAs                             :: 3 (5S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 95
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 8 of 95
            Pseudo Genes (incomplete)         :: 87 of 95
            Pseudo Genes (internal stop)      :: 5 of 95
            Pseudo Genes (multiple problems)  :: 5 of 95
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148632
                     /organism="Corynebacterium sp."
                     /mol_type="genomic DNA"
                     /isolate="SUG3750"
                     /isolation_source="milk"
                     /host="pig"
                     /db_xref="taxon:1720"
                     /environmental_sample
                     /geo_loc_name="Canada: Alberta, Lacombe"
                     /lat_lon="52.4685 N 113.7307 W"
                     /altitude="850 m"
                     /collection_date="2020"
                     /metagenome_source="milk metagenome"
                     /metagenomic
WGS         JBXGJD010000001-JBXGJD010000232
WGS_SCAFLD  NZ_JBXGJD010000001-NZ_JBXGJD010000232
//
LOCUS       NZ_JBMOSD010000000   3815835 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterococcus gallinarum strain LV3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBMOSD000000000
VERSION     NZ_JBMOSD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45919571
            Assembly: GCF_049315295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus gallinarum
  ORGANISM  Enterococcus gallinarum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 3815835)
  AUTHORS   Chen,W.
  TITLE     Molecular epidemiology, phenotypic and genomic characterization of
            oxazolidinones/Phenicols-resistant enterococcal isolates from
            diverse farm animals in Xinjiang, China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3815835)
  AUTHORS   Chen,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JAN-2025) College of Veterinary Medicine, Xinjiang
            Agricultural University, 311 of the Shaybak district, Urumqi
            830052, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBMOSD000000000.1.
            The Enterococcus gallinarum whole genome shotgun (WGS) project has
            the project accession NZ_JBMOSD000000000.  This version of the
            project (01) has the accession number NZ_JBMOSD010000000, and
            consists of sequences JBMOSD010000001-JBMOSD010001769.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049315295.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:57:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,864
            CDSs (total)                      :: 4,796
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 68
            rRNAs                             :: 4, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 682
            CDSs (without protein)            :: 682
            Pseudo Genes (ambiguous residues) :: 0 of 682
            Pseudo Genes (frameshifted)       :: 31 of 682
            Pseudo Genes (incomplete)         :: 647 of 682
            Pseudo Genes (internal stop)      :: 18 of 682
            Pseudo Genes (multiple problems)  :: 13 of 682
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3815835
                     /organism="Enterococcus gallinarum"
                     /mol_type="genomic DNA"
                     /strain="LV3"
                     /isolation_source="feces"
                     /host="donkey"
                     /db_xref="taxon:1353"
                     /geo_loc_name="China: Xinjiang"
                     /collection_date="2023-08-25"
                     /collected_by="Chen Wanzhao"
WGS         JBMOSD010000001-JBMOSD010001769
WGS_SCAFLD  NZ_JBMOSD010000001-NZ_JBMOSD010001769
//
LOCUS       NZ_JBSEHL010000000   3599649 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Dokdonella sp. isolate MAG 261, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSEHL000000000
VERSION     NZ_JBSEHL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50655632
            Assembly: GCF_056856315.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Dokdonella sp. (activated sludge metagenome)
  ORGANISM  Dokdonella sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Rhodanobacteraceae; Dokdonella.
REFERENCE   1  (bases 1 to 3599649)
  AUTHORS   Deaver,J.A., Solon,T., Grunden,A.M. and Call,D.F.
  TITLE     Disruption in Gene Expression Cycles of Polyphosphate Accumulating
            Organisms is Associated with a Full-Scale Enhanced Biological
            Phosphorus Removal Instability Event
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3599649)
  AUTHORS   Deaver,J.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-SEP-2025) Civil, Construction, and Environmental
            Engineering, North Carolina State University, 915 Partners Way,
            Raleigh, NC 27606, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSEHL000000000.1.
            The Dokdonella sp. whole genome shotgun (WGS) project has the
            project accession NZ_JBSEHL000000000.  This version of the project
            (01) has the accession number NZ_JBSEHL010000000, and consists of
            sequences JBSEHL010000001-JBSEHL010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.4
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 16x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056856315.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:25:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,279
            CDSs (total)                      :: 3,222
            Genes (coding)                    :: 3,020
            CDSs (with protein)               :: 3,020
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 202
            CDSs (without protein)            :: 202
            Pseudo Genes (ambiguous residues) :: 0 of 202
            Pseudo Genes (frameshifted)       :: 122 of 202
            Pseudo Genes (incomplete)         :: 81 of 202
            Pseudo Genes (internal stop)      :: 6 of 202
            Pseudo Genes (multiple problems)  :: 6 of 202
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3599649
                     /organism="Dokdonella sp."
                     /mol_type="genomic DNA"
                     /isolate="MAG 261"
                     /isolation_source="activated sludge"
                     /db_xref="taxon:2291710"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /collection_date="2023"
                     /metagenome_source="activated sludge metagenome"
                     /metagenomic
WGS         JBSEHL010000001-JBSEHL010000007
WGS_SCAFLD  NZ_JBSEHL010000001-NZ_JBSEHL010000007
//
LOCUS       NZ_JBMVGW010000000   4798757 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter ludwigii strain BP65e, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBMVGW000000000
VERSION     NZ_JBMVGW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45903187
            Assembly: GCF_049537315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter ludwigii
  ORGANISM  Enterobacter ludwigii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 4798757)
  AUTHORS   Zelinova,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JAN-2025) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBMVGW000000000.1.
            The Enterobacter ludwigii whole genome shotgun (WGS) project has
            the project accession NZ_JBMVGW000000000.  This version of the
            project (01) has the accession number NZ_JBMVGW010000000, and
            consists of sequences JBMVGW010000001-JBMVGW010000035.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 42.194x
            Sequencing Technology  :: NovaSeq 6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049537315.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:08:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,664
            CDSs (total)                      :: 4,577
            Genes (coding)                    :: 4,524
            CDSs (with protein)               :: 4,524
            Genes (RNA)                       :: 87
            rRNAs                             :: 3, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 21 of 53
            Pseudo Genes (incomplete)         :: 33 of 53
            Pseudo Genes (internal stop)      :: 17 of 53
            Pseudo Genes (multiple problems)  :: 16 of 53
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4798757
                     /organism="Enterobacter ludwigii"
                     /mol_type="genomic DNA"
                     /strain="BP65e"
                     /isolation_source="cloacal swab"
                     /host="Haliaeetus albicilla"
                     /db_xref="taxon:299767"
                     /geo_loc_name="Czechia: Horazdovice predmesti - Babin"
                     /collection_date="2020-05"
                     /genotype="2150"
WGS         JBMVGW010000001-JBMVGW010000035
WGS_SCAFLD  NZ_JBMVGW010000001-NZ_JBMVGW010000035
//
LOCUS       NZ_JBMOZR010000000   5147147 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter bugandensis strain 22529_A, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBMOZR000000000
VERSION     NZ_JBMOZR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47597769
            Assembly: GCF_049321895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter bugandensis
  ORGANISM  Enterobacter bugandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter.
REFERENCE   1  (bases 1 to 5147147)
  AUTHORS   Sedlakova,M.H., Fiserova,K. and Mlynarcik,P.
  TITLE     Resistance to colistin in a tertiary hospital, Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5147147)
  AUTHORS   Mlynarcik,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2025) Department of Microbiology, Palacky
            University Olomouc, Hnevotinska 3, Olomouc 775 15, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBMOZR000000000.1.
            The Enterobacter bugandensis whole genome shotgun (WGS) project has
            the project accession NZ_JBMOZR000000000.  This version of the
            project (01) has the accession number NZ_JBMOZR010000000, and
            consists of sequences JBMOZR010000001-JBMOZR010000064.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049321895.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:21:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,055
            CDSs (total)                      :: 4,968
            Genes (coding)                    :: 4,872
            CDSs (with protein)               :: 4,872
            Genes (RNA)                       :: 87
            rRNAs                             :: 3, 4, 4 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 96
            CDSs (without protein)            :: 96
            Pseudo Genes (ambiguous residues) :: 0 of 96
            Pseudo Genes (frameshifted)       :: 28 of 96
            Pseudo Genes (incomplete)         :: 73 of 96
            Pseudo Genes (internal stop)      :: 12 of 96
            Pseudo Genes (multiple problems)  :: 14 of 96
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5147147
                     /organism="Enterobacter bugandensis"
                     /mol_type="genomic DNA"
                     /strain="22529_A"
                     /isolation_source="Clinical sample from a hospital
                     setting"
                     /host="Homo sapiens"
                     /db_xref="taxon:881260"
                     /geo_loc_name="Czech Republic: Olomouc (Institute of
                     Microbiology, Faculty of Medicine, UPOL)"
                     /collection_date="2018-01-01/2024-12-31"
WGS         JBMOZR010000001-JBMOZR010000064
WGS_SCAFLD  NZ_JBMOZR010000001-NZ_JBMOZR010000064
//
LOCUS       NZ_JBNBOY010000000   4937099 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Enterobacter asburiae strain 1962, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBNBOY000000000
VERSION     NZ_JBNBOY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47331982
            Assembly: GCF_049727045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter asburiae
  ORGANISM  Enterobacter asburiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 4937099)
  AUTHORS   Alanbari,N., Amoura,A., Guerin,F., Cosson,G., Pistien,C.,
            Magreault,S., El Meouche,I., Lefort,A., Fantin,B., Cattoir,V. and
            De Lastours,V.
  TITLE     Temocillin Efficacy and Emergence of Resistance in Enterobacter
            cloacae Complex in a Murine Peritonitis Model
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4937099)
  AUTHORS   Alanbari,N., Amoura,A., Guerin,F., Cosson,G., Pistien,C.,
            Magreault,S., El Meouche,I., Lefort,A., Fantin,B., Cattoir,V. and
            De Lastours,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2025) U1230, University of Rennes, 2 Avenue du
            Professeur Leon Bernard, Rennes 35043, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNBOY000000000.1.
            The Enterobacter asburiae whole genome shotgun (WGS) project has
            the project accession NZ_JBNBOY000000000.  This version of the
            project (01) has the accession number NZ_JBNBOY010000000, and
            consists of sequences JBNBOY010000001-JBNBOY010000083.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 137x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049727045.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:16:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,938
            CDSs (total)                      :: 4,829
            Genes (coding)                    :: 4,735
            CDSs (with protein)               :: 4,735
            Genes (RNA)                       :: 109
            rRNAs                             :: 9, 5, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 4, 7 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 94
            CDSs (without protein)            :: 94
            Pseudo Genes (ambiguous residues) :: 0 of 94
            Pseudo Genes (frameshifted)       :: 27 of 94
            Pseudo Genes (incomplete)         :: 57 of 94
            Pseudo Genes (internal stop)      :: 19 of 94
            Pseudo Genes (multiple problems)  :: 8 of 94
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4937099
                     /organism="Enterobacter asburiae"
                     /mol_type="genomic DNA"
                     /strain="1962"
                     /isolation_source="spleen"
                     /host="Mus musculus"
                     /db_xref="taxon:61645"
                     /geo_loc_name="France: Paris"
                     /collection_date="2024-05"
                     /collected_by="INSERM UMR-1137 IAME"
WGS         JBNBOY010000001-JBNBOY010000083
WGS_SCAFLD  NZ_JBNBOY010000001-NZ_JBNBOY010000083
//
LOCUS       NZ_CDTCUL010000000   2352910 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Croceibacter atlanticus isolate MarMAG_001376, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDTCUL000000000
VERSION     NZ_CDTCUL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120697410
            Assembly: GCF_977300765.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Croceibacter atlanticus (marine metagenome)
  ORGANISM  Croceibacter atlanticus
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Croceibacter.
REFERENCE   1  (bases 1 to 2352910)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDTCUL000000000.1.
            The Croceibacter atlanticus whole genome shotgun (WGS) project has
            the project accession NZ_CDTCUL000000000.  This version of the
            project (01) has the accession number NZ_CDTCUL010000000, and
            consists of sequences CDTCUL010000001-CDTCUL010000417.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977300765.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:26:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,482
            CDSs (total)                      :: 2,461
            Genes (coding)                    :: 2,338
            CDSs (with protein)               :: 2,338
            Genes (RNA)                       :: 21
            tRNAs                             :: 18
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 2 of 123
            Pseudo Genes (incomplete)         :: 120 of 123
            Pseudo Genes (internal stop)      :: 1 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2352910
                     /organism="Croceibacter atlanticus"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_001376"
                     /db_xref="taxon:313588"
                     /environmental_sample
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDTCUL010000001-CDTCUL010000417
WGS_SCAFLD  NZ_CDTCUL010000001-NZ_CDTCUL010000417
//
LOCUS       NZ_AKNT01000000      1653281 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Helicobacter pylori NQ4228, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AKNT00000000
VERSION     NZ_AKNT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00777291
            Assembly: GCF_000274925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori NQ4228
  ORGANISM  Helicobacter pylori NQ4228
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1653281)
  AUTHORS   Blanchard,T.G., Czinn,S.J., Correa,P., Nakazawa,T., Keelan,M.,
            Morningstar,L., Santana-Cruz,I., Maroo,A., McCracken,C.,
            Shefchek,K., Daugherty,S., Song,Y., Fraser,C.M. and Fricke,W.F.
  TITLE     Genome sequences of 65 Helicobacter pylori strains isolated from
            asymptomatic individuals and patients with gastric cancer, peptic
            ulcer disease, or gastritis
  JOURNAL   Pathog Dis 68 (2), 39-43 (2013)
   PUBMED   23661595
REFERENCE   2  (bases 1 to 1653281)
  AUTHORS   Blanchard,T.G., Czinn,S.J., McCracken,C., Abolude,K., Maroo,A.,
            Santana-Cruz,I., Tallon,L.J. and Ficke,F.W.F.
  TITLE     Genome sequence of Helicobacter pylori NQ4228
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 1653281)
  AUTHORS   Blanchard,T.G., Czinn,S.J., McCracken,C.L., Abolude,K., Maroo,A.,
            Santana-Cruz,I., Tallon,L.J. and Ficke,F.W.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2012) Institute for Genome Sciences, University
            of Maryland School of Medicine, 801 W. Baltimore St, Baltimore, MD
            21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AKNT00000000.1.
            The Helicobacter pylori NQ4228 whole genome shotgun (WGS) project
            has the project accession NZ_AKNT00000000.  This version of the
            project (01) has the accession number NZ_AKNT01000000, and consists
            of sequences AKNT01000001-AKNT01000006.
            Samples deposited at Biodefense and  Emerging Infections Research
            Resources Repository (BEI resources).
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Celera Assembler v. 6.1
            Genome Coverage       :: 64.81x
            Sequencing Technology :: Illumina;454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000274925.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:24:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,577
            CDSs (total)                      :: 1,532
            Genes (coding)                    :: 1,459
            CDSs (with protein)               :: 1,459
            Genes (RNA)                       :: 45
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 73
            CDSs (without protein)            :: 73
            Pseudo Genes (ambiguous residues) :: 0 of 73
            Pseudo Genes (frameshifted)       :: 54 of 73
            Pseudo Genes (incomplete)         :: 22 of 73
            Pseudo Genes (internal stop)      :: 10 of 73
            Pseudo Genes (multiple problems)  :: 12 of 73
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653281
                     /organism="Helicobacter pylori NQ4228"
                     /mol_type="genomic DNA"
                     /strain="NQ4228"
                     /host="Homo sapiens"
                     /db_xref="taxon:992025"
                     /geo_loc_name="Colombia"
WGS         AKNT01000001-AKNT01000006
WGS_SCAFLD  NZ_AKNT01000001-NZ_AKNT01000006
//
LOCUS       NZ_AKNS01000000      1646737 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Helicobacter pylori NQ4200, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AKNS00000000
VERSION     NZ_AKNS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00777289
            Assembly: GCF_000274905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori NQ4200
  ORGANISM  Helicobacter pylori NQ4200
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1646737)
  AUTHORS   Blanchard,T.G., Czinn,S.J., Correa,P., Nakazawa,T., Keelan,M.,
            Morningstar,L., Santana-Cruz,I., Maroo,A., McCracken,C.,
            Shefchek,K., Daugherty,S., Song,Y., Fraser,C.M. and Fricke,W.F.
  TITLE     Genome sequences of 65 Helicobacter pylori strains isolated from
            asymptomatic individuals and patients with gastric cancer, peptic
            ulcer disease, or gastritis
  JOURNAL   Pathog Dis 68 (2), 39-43 (2013)
   PUBMED   23661595
REFERENCE   2  (bases 1 to 1646737)
  AUTHORS   Blanchard,T.G., Czinn,S.J., McCracken,C., Abolude,K., Maroo,A.,
            Santana-Cruz,I., Tallon,L.J. and Ficke,F.W.F.
  TITLE     Genome sequence of Helicobacter pylori NQ4200
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 1646737)
  AUTHORS   Blanchard,T.G., Czinn,S.J., McCracken,C.L., Abolude,K., Maroo,A.,
            Santana-Cruz,I., Tallon,L.J. and Ficke,F.W.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2012) Institute for Genome Sciences, University
            of Maryland School of Medicine, 801 W. Baltimore St, Baltimore, MD
            21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AKNS00000000.1.
            The Helicobacter pylori NQ4200 whole genome shotgun (WGS) project
            has the project accession NZ_AKNS00000000.  This version of the
            project (01) has the accession number NZ_AKNS01000000, and consists
            of sequences AKNS01000001-AKNS01000014.
            Samples deposited at Biodefense and  Emerging Infections Research
            Resources Repository (BEI resources).
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Celera Assembler v. 6.1
            Genome Coverage       :: 29.62x
            Sequencing Technology :: Illumina;454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000274905.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:23:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,579
            CDSs (total)                      :: 1,534
            Genes (coding)                    :: 1,458
            CDSs (with protein)               :: 1,458
            Genes (RNA)                       :: 45
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 47 of 76
            Pseudo Genes (incomplete)         :: 26 of 76
            Pseudo Genes (internal stop)      :: 10 of 76
            Pseudo Genes (multiple problems)  :: 6 of 76
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1646737
                     /organism="Helicobacter pylori NQ4200"
                     /mol_type="genomic DNA"
                     /strain="NQ4200"
                     /host="Homo sapiens"
                     /db_xref="taxon:992024"
                     /geo_loc_name="Colombia"
WGS         AKNS01000001-AKNS01000014
WGS_SCAFLD  NZ_AKNS01000001-NZ_AKNS01000014
//
LOCUS       NZ_AKPL01000000      1693924 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Helicobacter pylori Hp P-4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AKPL00000000
VERSION     NZ_AKPL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00778285
            Assembly: GCF_000274845.2
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori Hp P-4
  ORGANISM  Helicobacter pylori Hp P-4
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1693924)
  AUTHORS   Blanchard,T.G., Czinn,S.J., Correa,P., Nakazawa,T., Keelan,M.,
            Morningstar,L., Santana-Cruz,I., Maroo,A., McCracken,C.,
            Shefchek,K., Daugherty,S., Song,Y., Fraser,C.M. and Fricke,W.F.
  TITLE     Genome sequences of 65 Helicobacter pylori strains isolated from
            asymptomatic individuals and patients with gastric cancer, peptic
            ulcer disease, or gastritis
  JOURNAL   Pathog Dis 68 (2), 39-43 (2013)
   PUBMED   23661595
REFERENCE   2  (bases 1 to 1693924)
  AUTHORS   Blanchard,T.G., Czinn,S.J., McCracken,C., Abolude,K., Maroo,A.,
            Santana-Cruz,I., Tallon,L.J. and Ficke,F.W.F.
  TITLE     Genome sequence of Helicobacter pylori Hp P-4
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 1693924)
  AUTHORS   Blanchard,T.G., Czinn,S.J., McCracken,C.L., Abolude,K., Maroo,A.,
            Santana-Cruz,I., Tallon,L.J. and Ficke,F.W.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-MAY-2012) Institute for Genome Sciences, University
            of Maryland School of Medicine, 801 W. Baltimore St, Baltimore, MD
            21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AKPL00000000.1.
            
            On Nov 9, 2015 this sequence version replaced gi:420486537.
            The Helicobacter pylori Hp P-4 whole genome shotgun (WGS) project
            has the project accession NZ_AKPL00000000.  This version of the
            project (01) has the accession number NZ_AKPL01000000, and consists
            of sequences AKPL01000001-AKPL01000008.
            Samples deposited at Biodefense and  Emerging Infections Research
            Resources Repository (BEI resources).
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Celera Assembler v. 6.1
            Genome Coverage       :: 48.43x
            Sequencing Technology :: Illumina;454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000274845.2-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:37:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,611
            CDSs (total)                      :: 1,564
            Genes (coding)                    :: 1,489
            CDSs (with protein)               :: 1,489
            Genes (RNA)                       :: 47
            rRNAs                             :: 4, 4 (5S, 23S)
            complete rRNAs                    :: 4, 4 (5S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 52 of 75
            Pseudo Genes (incomplete)         :: 17 of 75
            Pseudo Genes (internal stop)      :: 19 of 75
            Pseudo Genes (multiple problems)  :: 12 of 75
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1693924
                     /organism="Helicobacter pylori Hp P-4"
                     /mol_type="genomic DNA"
                     /strain="Hp P-4"
                     /host="Homo sapiens"
                     /db_xref="taxon:992075"
                     /geo_loc_name="USA: Cleveland, OH"
WGS         AKPL01000001-AKPL01000008
WGS_SCAFLD  NZ_AKPL01000001-NZ_AKPL01000008
//
LOCUS       NZ_AMOR01000000      1610617 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Helicobacter pylori R030b, whole genome shotgun sequencing project.
ACCESSION   NZ_AMOR00000000
VERSION     NZ_AMOR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00997706
            Assembly: GCF_000299695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori R030b
  ORGANISM  Helicobacter pylori R030b
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1610617)
  AUTHORS   Blanchard,T.G., Czinn,S.J., Correa,P., Nakazawa,T., Keelan,M.,
            Morningstar,L., Santana-Cruz,I., Maroo,A., McCracken,C.,
            Shefchek,K., Daugherty,S., Song,Y., Fraser,C.M. and Fricke,W.F.
  TITLE     Genome sequences of 65 Helicobacter pylori strains isolated from
            asymptomatic individuals and patients with gastric cancer, peptic
            ulcer disease, or gastritis
  JOURNAL   Pathog Dis 68 (2), 39-43 (2013)
   PUBMED   23661595
REFERENCE   2  (bases 1 to 1610617)
  AUTHORS   Blanchard,T.G., Czinn,S.J., McCracken,C.M., Abolude,K.A.,
            Shefchek,K.S., Maroo,A.M., Santana-Cruz,I.S., Tallon,L.J. and
            Ficke,F.W.F.
  TITLE     Comparative Sequence Analysis of H. pylori isolates
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 1610617)
  AUTHORS   Blanchard,T.G., Czinn,S.J., McCracken,C.M., Abolude,K.A.,
            Shefchek,K.S., Maroo,A.M., Santana-Cruz,I.C., Tallon,L.J. and
            Ficke,F.W.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-AUG-2012) Institute for Genome Sciences, University
            of Maryland School of Medicine, 801 W. Baltimore St, Baltimore, MD
            21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AMOR00000000.1.
            The Helicobacter pylori R030b whole genome shotgun (WGS) project
            has the project accession NZ_AMOR00000000.  This version of the
            project (01) has the accession number NZ_AMOR01000000, and consists
            of sequences AMOR01000001-AMOR01000011.
            Bacterial source available from the Biodefense and Emerging
            Infections Research Resources Repository.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Celera Assembler v. 7.0
            Genome Coverage       :: 46x 454; 20x Illumina
            Sequencing Technology :: Illumina; 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000299695.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:26:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,549
            CDSs (total)                      :: 1,498
            Genes (coding)                    :: 1,424
            CDSs (with protein)               :: 1,424
            Genes (RNA)                       :: 51
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4 (5S, 23S)
            partial rRNAs                     :: 4 (16S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 54 of 74
            Pseudo Genes (incomplete)         :: 18 of 74
            Pseudo Genes (internal stop)      :: 12 of 74
            Pseudo Genes (multiple problems)  :: 10 of 74
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1610617
                     /organism="Helicobacter pylori R030b"
                     /mol_type="genomic DNA"
                     /strain="R030b"
                     /host="Homo sapiens"
                     /db_xref="taxon:1145111"
                     /geo_loc_name="Canada"
WGS         AMOR01000001-AMOR01000011
WGS_SCAFLD  NZ_AMOR01000001-NZ_AMOR01000011
//
LOCUS       NZ_AKPU01000000      1639810 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Helicobacter pylori Hp P-30, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AKPU00000000
VERSION     NZ_AKPU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00778871
            Assembly: GCF_000275405.2
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori Hp P-30
  ORGANISM  Helicobacter pylori Hp P-30
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1639810)
  AUTHORS   Blanchard,T.G., Czinn,S.J., Correa,P., Nakazawa,T., Keelan,M.,
            Morningstar,L., Santana-Cruz,I., Maroo,A., McCracken,C.,
            Shefchek,K., Daugherty,S., Song,Y., Fraser,C.M. and Fricke,W.F.
  TITLE     Genome sequences of 65 Helicobacter pylori strains isolated from
            asymptomatic individuals and patients with gastric cancer, peptic
            ulcer disease, or gastritis
  JOURNAL   Pathog Dis 68 (2), 39-43 (2013)
   PUBMED   23661595
REFERENCE   2  (bases 1 to 1639810)
  AUTHORS   Blanchard,T.G., Czinn,S.J., McCracken,C., Abolude,K., Maroo,A.,
            Santana-Cruz,I., Tallon,L.J. and Ficke,F.W.F.
  TITLE     Genome sequence of Helicobacter pylori Hp P-30
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 1639810)
  AUTHORS   Blanchard,T.G., Czinn,S.J., McCracken,C.L., Abolude,K., Maroo,A.,
            Santana-Cruz,I., Tallon,L.J. and Ficke,F.W.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAY-2012) Institute for Genome Sciences, University
            of Maryland School of Medicine, 801 W. Baltimore St, Baltimore, MD
            21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AKPU00000000.1.
            
            On Nov 9, 2015 this sequence version replaced gi:420501832.
            The Helicobacter pylori Hp P-30 whole genome shotgun (WGS) project
            has the project accession NZ_AKPU00000000.  This version of the
            project (01) has the accession number NZ_AKPU01000000, and consists
            of sequences AKPU01000002-AKPU01000005.
            Samples deposited at Biodefense and  Emerging Infections Research
            Resources Repository (BEI resources).
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Celera Assembler v. 6.1
            Genome Coverage       :: 46.64x
            Sequencing Technology :: Illumina;454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000275405.2-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:33:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,576
            CDSs (total)                      :: 1,528
            Genes (coding)                    :: 1,453
            CDSs (with protein)               :: 1,453
            Genes (RNA)                       :: 48
            rRNAs                             :: 3, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 2, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 50 of 75
            Pseudo Genes (incomplete)         :: 21 of 75
            Pseudo Genes (internal stop)      :: 15 of 75
            Pseudo Genes (multiple problems)  :: 11 of 75
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639810
                     /organism="Helicobacter pylori Hp P-30"
                     /mol_type="genomic DNA"
                     /strain="Hp P-30"
                     /host="Homo sapiens"
                     /db_xref="taxon:992087"
                     /geo_loc_name="USA: Cleveland, OH"
WGS         AKPU01000002-AKPU01000005
WGS_SCAFLD  NZ_AKPU01000002-NZ_AKPU01000005
//
LOCUS       NZ_AKPG01000000      1648064 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Helicobacter pylori Hp H-23, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AKPG00000000
VERSION     NZ_AKPG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00778865
            Assembly: GCF_000274165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori Hp H-23
  ORGANISM  Helicobacter pylori Hp H-23
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1648064)
  AUTHORS   Blanchard,T.G., Czinn,S.J., Correa,P., Nakazawa,T., Keelan,M.,
            Morningstar,L., Santana-Cruz,I., Maroo,A., McCracken,C.,
            Shefchek,K., Daugherty,S., Song,Y., Fraser,C.M. and Fricke,W.F.
  TITLE     Genome sequences of 65 Helicobacter pylori strains isolated from
            asymptomatic individuals and patients with gastric cancer, peptic
            ulcer disease, or gastritis
  JOURNAL   Pathog Dis 68 (2), 39-43 (2013)
   PUBMED   23661595
REFERENCE   2  (bases 1 to 1648064)
  AUTHORS   Blanchard,T.G., Czinn,S.J., McCracken,C., Abolude,K., Maroo,A.,
            Santana-Cruz,I., Tallon,L.J. and Ficke,F.W.F.
  TITLE     Genome sequence of Helicobacter pylori Hp H-23
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 1648064)
  AUTHORS   Blanchard,T.G., Czinn,S.J., McCracken,C.L., Abolude,K., Maroo,A.,
            Santana-Cruz,I., Tallon,L.J. and Ficke,F.W.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-APR-2012) Institute for Genome Sciences, University
            of Maryland School of Medicine, 801 W. Baltimore St, Baltimore, MD
            21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AKPG00000000.1.
            The Helicobacter pylori Hp H-23 whole genome shotgun (WGS) project
            has the project accession NZ_AKPG00000000.  This version of the
            project (01) has the accession number NZ_AKPG01000000, and consists
            of sequences AKPG01000001-AKPG01000009.
            Samples deposited at Biodefense and  Emerging Infections Research
            Resources Repository (BEI resources).
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Celera Assembler v. 6.1
            Genome Coverage       :: 62.21x
            Sequencing Technology :: Illumina;454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000274165.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:55:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,573
            CDSs (total)                      :: 1,529
            Genes (coding)                    :: 1,456
            CDSs (with protein)               :: 1,456
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 2, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 73
            CDSs (without protein)            :: 73
            Pseudo Genes (ambiguous residues) :: 0 of 73
            Pseudo Genes (frameshifted)       :: 55 of 73
            Pseudo Genes (incomplete)         :: 15 of 73
            Pseudo Genes (internal stop)      :: 15 of 73
            Pseudo Genes (multiple problems)  :: 12 of 73
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648064
                     /organism="Helicobacter pylori Hp H-23"
                     /mol_type="genomic DNA"
                     /strain="Hp H-23"
                     /host="Homo sapiens"
                     /db_xref="taxon:992068"
                     /geo_loc_name="USA: Cleveland, OH"
WGS         AKPG01000001-AKPG01000009
WGS_SCAFLD  NZ_AKPG01000001-NZ_AKPG01000009
//
LOCUS       NZ_CBBUJQ010000000   2621009 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Flavobacterium sp. isolate
            PELAGICS-MAG-m2-bin114419-MOSTH-LM-04aug20., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBBUJQ000000000
VERSION     NZ_CBBUJQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117457641
            Assembly: GCF_964974385.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Flavobacterium sp. (freshwater metagenome)
  ORGANISM  Flavobacterium sp.
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (bases 1 to 2621009)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JAN-2025) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBBUJQ000000000.1.
            The Flavobacterium sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBBUJQ000000000.  This version of the project
            (01) has the accession number NZ_CBBUJQ010000000, and consists of
            sequences CBBUJQ010000001-CBBUJQ010000048.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964974385.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 01:19:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,341
            CDSs (total)                      :: 2,298
            Genes (coding)                    :: 2,272
            CDSs (with protein)               :: 2,272
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 7 of 26
            Pseudo Genes (incomplete)         :: 19 of 26
            Pseudo Genes (internal stop)      :: 4 of 26
            Pseudo Genes (multiple problems)  :: 4 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2621009
                     /organism="Flavobacterium sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-m2-bin114419-MOSTH-LM-04aug20."
                     /isolation_source="Most lake"
                     /db_xref="taxon:239"
                     /environmental_sample
                     /geo_loc_name="Czechia"
                     /collection_date="2020-08-04"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBBUJQ010000001-CBBUJQ010000048
WGS_SCAFLD  NZ_CBBUJQ010000001-NZ_CBBUJQ010000048
//
LOCUS       NZ_FNPX01000000      3810757 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Jannaschia faecimaris strain DSM 100420, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNPX00000000
VERSION     NZ_FNPX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05444004
            Assembly: GCF_900107415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Jannaschia faecimaris
  ORGANISM  Jannaschia faecimaris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Jannaschia.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNPX00000000.1.
            The Jannaschia faecimaris whole genome shotgun (WGS) project has
            the project accession NZ_FNPX00000000.  This version of the project
            (01) has the accession number NZ_FNPX01000000, and consists of
            sequences FNPX01000001-FNPX01000048.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900107415.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:58:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,871
            CDSs (total)                      :: 3,821
            Genes (coding)                    :: 3,728
            CDSs (with protein)               :: 3,728
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 93
            CDSs (without protein)            :: 93
            Pseudo Genes (ambiguous residues) :: 0 of 93
            Pseudo Genes (frameshifted)       :: 32 of 93
            Pseudo Genes (incomplete)         :: 64 of 93
            Pseudo Genes (internal stop)      :: 19 of 93
            Pseudo Genes (multiple problems)  :: 18 of 93
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3810757
                     /organism="Jannaschia faecimaris"
                     /mol_type="genomic DNA"
                     /strain="DSM 100420"
                     /type_material="type strain of Jannaschia faecimaris"
                     /db_xref="taxon:1244108"
WGS         FNPX01000001-FNPX01000048
WGS_SCAFLD  NZ_FNPX01000001-NZ_FNPX01000048
//
LOCUS       NZ_JVVU01000000      5180929 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella aerogenes strain 1278_EAER, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JVVU00000000
VERSION     NZ_JVVU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03197248
            Assembly: GCF_001054275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella aerogenes
  ORGANISM  Klebsiella aerogenes
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 5180929)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5180929)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JVVU00000000.1.
            The Klebsiella aerogenes whole genome shotgun (WGS) project has the
            project accession NZ_JVVU00000000.  This version of the project
            (01) has the accession number NZ_JVVU01000000, and consists of
            sequences JVVU01000001-JVVU01000079.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 58x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001054275.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:58:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,898
            CDSs (total)                      :: 4,839
            Genes (coding)                    :: 4,759
            CDSs (with protein)               :: 4,759
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 3 (16S, 23S)
            complete rRNAs                    :: 2, 3 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 32 of 80
            Pseudo Genes (incomplete)         :: 46 of 80
            Pseudo Genes (internal stop)      :: 10 of 80
            Pseudo Genes (multiple problems)  :: 8 of 80
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5180929
                     /organism="Klebsiella aerogenes"
                     /mol_type="genomic DNA"
                     /strain="1278_EAER"
                     /host="Homo sapiens"
                     /db_xref="taxon:548"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JVVU01000001-JVVU01000079
WGS_SCAFLD  NZ_JVVU01000001-NZ_JVVU01000079
//
LOCUS       NZ_FPCH01000000      4425354 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Hyphomicrobium facile strain DSM 1565, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FPCH00000000
VERSION     NZ_FPCH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04488557
            Assembly: GCF_900116175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Hyphomicrobium facile
  ORGANISM  Hyphomicrobium facile
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Hyphomicrobiaceae; Hyphomicrobium.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FPCH00000000.1.
            The Hyphomicrobium facile whole genome shotgun (WGS) project has
            the project accession NZ_FPCH00000000.  This version of the project
            (01) has the accession number NZ_FPCH01000000, and consists of
            sequences FPCH01000001-FPCH01000005.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900116175.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:36:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,110
            CDSs (total)                      :: 4,049
            Genes (coding)                    :: 4,021
            CDSs (with protein)               :: 4,021
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 9 of 28
            Pseudo Genes (incomplete)         :: 19 of 28
            Pseudo Genes (internal stop)      :: 1 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4425354
                     /organism="Hyphomicrobium facile"
                     /mol_type="genomic DNA"
                     /strain="DSM 1565"
                     /type_material="type strain of Hyphomicrobium facile"
                     /db_xref="taxon:51670"
WGS         FPCH01000001-FPCH01000005
WGS_SCAFLD  NZ_FPCH01000001-NZ_FPCH01000005
//
LOCUS       NZ_RJHE01000000      1587048 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Helicobacter pylori strain ZH90, whole genome shotgun sequencing
            project.
ACCESSION   NZ_RJHE00000000
VERSION     NZ_RJHE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10339048
            Assembly: GCF_004013605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori
  ORGANISM  Helicobacter pylori
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1587048)
  AUTHORS   Wagner,K.
  TITLE     Genetic determinants and prediction of antibiotic resistance
            phenotypes in Helicobacter pylori
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1587048)
  AUTHORS   Wagner,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2018) Infection Diagnostics, University Hospital
            Basel, Petersplatz 10, Basel 4051, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RJHE00000000.1.
            The Helicobacter pylori whole genome shotgun (WGS) project has the
            project accession NZ_RJHE00000000.  This version of the project
            (01) has the accession number NZ_RJHE01000000, and consists of
            sequences RJHE01000001-RJHE01000030.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.6.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004013605.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:08:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,541
            CDSs (total)                      :: 1,499
            Genes (coding)                    :: 1,424
            CDSs (with protein)               :: 1,424
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 52 of 75
            Pseudo Genes (incomplete)         :: 22 of 75
            Pseudo Genes (internal stop)      :: 11 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587048
                     /organism="Helicobacter pylori"
                     /mol_type="genomic DNA"
                     /strain="ZH90"
                     /isolation_source="gastric biopsy"
                     /host="Homo sapiens"
                     /db_xref="taxon:210"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.36667 N 8.55 E"
                     /collection_date="2017-11-11"
                     /collected_by="K Wagner"
WGS         RJHE01000001-RJHE01000030
WGS_SCAFLD  NZ_RJHE01000001-NZ_RJHE01000030
//
LOCUS       NZ_JBVHAY010000000   4722049 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Hafnia alvei strain AH6, whole genome shotgun sequencing project.
ACCESSION   NZ_JBVHAY000000000
VERSION     NZ_JBVHAY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN55720511
            Assembly: GCF_056790145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Hafnia alvei
  ORGANISM  Hafnia alvei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Hafniaceae; Hafnia.
REFERENCE   1  (bases 1 to 4722049)
  AUTHORS   Asadi,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-FEB-2026) Department of Chemistry and Biotechnology,
            Tallinn University of Technology, Akadeemia tee 15, Tallinn 12616,
            Estonia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVHAY000000000.1.
            The Hafnia alvei whole genome shotgun (WGS) project has the project
            accession NZ_JBVHAY000000000.  This version of the project (01) has
            the accession number NZ_JBVHAY010000000, and consists of sequences
            JBVHAY010000001-JBVHAY010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 98x
            Sequencing Technology  :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056790145.2-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 01:51:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,325
            CDSs (total)                      :: 4,193
            Genes (coding)                    :: 4,133
            CDSs (with protein)               :: 4,133
            Genes (RNA)                       :: 132
            rRNAs                             :: 10, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 10, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 95
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 23 of 60
            Pseudo Genes (incomplete)         :: 39 of 60
            Pseudo Genes (internal stop)      :: 8 of 60
            Pseudo Genes (multiple problems)  :: 10 of 60
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4722049
                     /organism="Hafnia alvei"
                     /mol_type="genomic DNA"
                     /strain="AH6"
                     /isolation_source="Mayonnaise-based potato salad
                     (ready-to-eat food)"
                     /db_xref="taxon:569"
                     /geo_loc_name="Estonia: Tallinn"
                     /collection_date="2021-09-10"
WGS         JBVHAY010000001-JBVHAY010000004
WGS_SCAFLD  NZ_JBVHAY010000001-NZ_JBVHAY010000004
//
LOCUS       NZ_MVWV01000000      1564796 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Helicobacter pylori strain HP12014, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MVWV00000000
VERSION     NZ_MVWV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06329494
            Assembly: GCF_003638375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori
  ORGANISM  Helicobacter pylori
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1564796)
  AUTHORS   Lamichhane,B., Chua,E.G. and Tay,C.Y.
  TITLE     Genome analysis of clinical strains of Helicobacter pylori from
            Australia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1564796)
  AUTHORS   Lamichhane,B., Chua,E.G. and Tay,C.Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2017) Marshall Center for Infectious Diseases
            Research and Training, University of Western Australia, Stirling
            Highway, Crawley 6009, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MVWV00000000.1.
            The Helicobacter pylori whole genome shotgun (WGS) project has the
            project accession NZ_MVWV00000000.  This version of the project
            (01) has the accession number NZ_MVWV01000000, and consists of
            sequences MVWV01000001-MVWV01000031.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 96x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003638375.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:06:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,532
            CDSs (total)                      :: 1,490
            Genes (coding)                    :: 1,412
            CDSs (with protein)               :: 1,412
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 45 of 78
            Pseudo Genes (incomplete)         :: 32 of 78
            Pseudo Genes (internal stop)      :: 7 of 78
            Pseudo Genes (multiple problems)  :: 6 of 78
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564796
                     /organism="Helicobacter pylori"
                     /mol_type="genomic DNA"
                     /strain="HP12014"
                     /host="Homo sapiens"
                     /db_xref="taxon:210"
                     /geo_loc_name="Australia: Perth"
                     /collection_date="2012"
                     /collected_by="Barry Marshall"
WGS         MVWV01000001-MVWV01000031
WGS_SCAFLD  NZ_MVWV01000001-NZ_MVWV01000031
//
LOCUS       NZ_JDSN01000000      2191398 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Glaesserella parasuis HPS9, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JDSN00000000
VERSION     NZ_JDSN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02769535
            Assembly: GCF_000688855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis HPS9
  ORGANISM  Glaesserella parasuis HPS9
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2191398)
  AUTHORS   Lawrence,P.K., Wiener,B.L., Kolander-Bremer,T., Bey,R.F.,
            Stine,D.L., Kittichotirat,W. and Bumgarner,R.E.
  TITLE     Genome-Wide Association Studies of Virulent and Avirulent
            Haemophilus parasuis Serotype 4 Strains
  JOURNAL   Genome Announc 2 (5), e00884-14 (2014)
   PUBMED   25189591
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2191398)
  AUTHORS   Kittichotirat,W., Bumgarner,R.E. and Lawrence,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-FEB-2014) Newport Laboratories, A Sanofi Company,
            Newport Laboratories, A Sanofi Company, 1520 Prairie Dr,
            Worthington, MN 56187, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JDSN00000000.1.
            The Glaesserella parasuis HPS9 whole genome shotgun (WGS) project
            has the project accession NZ_JDSN00000000.  This version of the
            project (01) has the accession number NZ_JDSN01000000, and consists
            of sequences JDSN01000001-JDSN01000209.
            Bacteria from: Newport Laboratories, A Sanofi company
            Source DNA: Newport Laboratories, A Sanofi company.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria available from Newport Laboratories, A Sanofi company.
            Source DNA available from Newport Laboratories, A Sanofi company.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.09
            Assembly Name         :: HparHPS9v1.0
            Long Assembly Name    :: Haemophilus parasuis serotype 4, strain
                                     HPS9 Version 1
            Genome Coverage       :: 17.26x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000688855.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:24:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,333
            CDSs (total)                      :: 2,269
            Genes (coding)                    :: 2,105
            CDSs (with protein)               :: 2,105
            Genes (RNA)                       :: 64
            rRNAs                             :: 3, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 164
            CDSs (without protein)            :: 164
            Pseudo Genes (ambiguous residues) :: 0 of 164
            Pseudo Genes (frameshifted)       :: 44 of 164
            Pseudo Genes (incomplete)         :: 133 of 164
            Pseudo Genes (internal stop)      :: 16 of 164
            Pseudo Genes (multiple problems)  :: 26 of 164
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2191398
                     /organism="Glaesserella parasuis HPS9"
                     /mol_type="genomic DNA"
                     /strain="HPS9"
                     /serotype="4"
                     /isolation_source="pig lungs"
                     /host="pig"
                     /db_xref="taxon:1450513"
                     /geo_loc_name="USA"
WGS         JDSN01000001-JDSN01000209
WGS_SCAFLD  NZ_JDSN01000001-NZ_JDSN01000209
//
LOCUS       NZ_RJTQ01000000      5446547 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella ornithinolytica strain YDC775_11, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RJTQ00000000
VERSION     NZ_RJTQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10343279
            Assembly: GCF_003782025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella ornithinolytica (Raoultella ornithinolytica)
  ORGANISM  Klebsiella ornithinolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 5446547)
  AUTHORS   Iovleva,A.V.
  TITLE     OXA-232 in Raoultella ornithinolytica
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5446547)
  AUTHORS   Iovleva,A.V.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-NOV-2018) Medicine/Infectious Diseases, University of
            Pittsburgh, Scaife Hall, Suite 829 3550 Terrace Street, Pittsburgh,
            PA 15213, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RJTQ00000000.1.
            The Klebsiella ornithinolytica whole genome shotgun (WGS) project
            has the project accession NZ_RJTQ00000000.  This version of the
            project (01) has the accession number NZ_RJTQ01000000, and consists
            of sequences RJTQ01000001-RJTQ01000173.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 10.1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 121x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003782025.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:32:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,202
            CDSs (total)                      :: 5,128
            Genes (coding)                    :: 5,007
            CDSs (with protein)               :: 5,007
            Genes (RNA)                       :: 74
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 121
            Pseudo Genes (ambiguous residues) :: 0 of 121
            Pseudo Genes (frameshifted)       :: 28 of 121
            Pseudo Genes (incomplete)         :: 97 of 121
            Pseudo Genes (internal stop)      :: 13 of 121
            Pseudo Genes (multiple problems)  :: 14 of 121
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5446547
                     /organism="Klebsiella ornithinolytica"
                     /mol_type="genomic DNA"
                     /strain="YDC775_11"
                     /isolation_source="Abdominal abscess"
                     /host="Homo sapiens"
                     /db_xref="taxon:54291"
                     /geo_loc_name="USA: Pittsburgh"
                     /lat_lon="40.44 N 79.96 W"
                     /collection_date="2016-05"
                     /collected_by="University of Pittsburgh"
WGS         RJTQ01000001-RJTQ01000173
WGS_SCAFLD  NZ_RJTQ01000001-NZ_RJTQ01000173
//
LOCUS       NZ_LFDN01000000      1812459 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus influenzae strain HI1388, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LFDN00000000
VERSION     NZ_LFDN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03702700
            Assembly: GCF_001184645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (bases 1 to 1812459)
  AUTHORS   Whitby,P.W., Seale,T.W., Morton,D.J. and Stull,T.L.
  TITLE     Antisera Against Certain Conserved Surface-Exposed Peptides of
            Nontypeable Haemophilus influenzae Are Protective
  JOURNAL   PLoS One 10 (9), e0136867 (2015)
   PUBMED   26390432
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1812459)
  AUTHORS   VanWagoner,T.M., Mussa,H., Whitby,P.W., Morton,D.J., Seale,T.W. and
            Stull,T.L.
  TITLE     Genome sequences of invasive non-typeable Haemophilus influenzae
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 1812459)
  AUTHORS   VanWagoner,T.M., Mussa,H., Whitby,P.W., Morton,D.J., Seale,T.W. and
            Stull,T.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JUN-2015) Pediatrics/OCTSI, University of Oklahoma
            Health Sciences Center, 1000 N. Lincoln Blvd, Oklahoma City, OK
            73107, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LFDN00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_LFDN00000000.  This version of the project
            (01) has the accession number NZ_LFDN01000000, and consists of
            sequences LFDN01000001-LFDN01000016.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 4.2.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 588.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001184645.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:33:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,793
            CDSs (total)                      :: 1,734
            Genes (coding)                    :: 1,677
            CDSs (with protein)               :: 1,677
            Genes (RNA)                       :: 59
            rRNAs                             :: 3, 3 (5S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 28 of 57
            Pseudo Genes (incomplete)         :: 35 of 57
            Pseudo Genes (internal stop)      :: 10 of 57
            Pseudo Genes (multiple problems)  :: 11 of 57
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1812459
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /strain="HI1388"
                     /isolation_source="ear"
                     /host="Homo sapiens"
                     /db_xref="taxon:727"
                     /geo_loc_name="USA: Missouri"
WGS         LFDN01000001-LFDN01000016
WGS_SCAFLD  NZ_LFDN01000001-NZ_LFDN01000016
//
LOCUS       NZ_RJTS01000000      5388241 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella ornithinolytica strain YDC775_6, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RJTS00000000
VERSION     NZ_RJTS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10343277
            Assembly: GCF_003782095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella ornithinolytica (Raoultella ornithinolytica)
  ORGANISM  Klebsiella ornithinolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 5388241)
  AUTHORS   Iovleva,A.V.
  TITLE     OXA-232 in Raoultella ornithinolytica
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5388241)
  AUTHORS   Iovleva,A.V.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-NOV-2018) Medicine/Infectious Diseases, University of
            Pittsburgh, Scaife Hall, Suite 829 3550 Terrace Street, Pittsburgh,
            PA 15213, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RJTS00000000.1.
            The Klebsiella ornithinolytica whole genome shotgun (WGS) project
            has the project accession NZ_RJTS00000000.  This version of the
            project (01) has the accession number NZ_RJTS01000000, and consists
            of sequences RJTS01000001-RJTS01000316.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 10.1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 93x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003782095.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:31:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,260
            CDSs (total)                      :: 5,187
            Genes (coding)                    :: 5,037
            CDSs (with protein)               :: 5,037
            Genes (RNA)                       :: 73
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 60
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 150
            CDSs (without protein)            :: 150
            Pseudo Genes (ambiguous residues) :: 0 of 150
            Pseudo Genes (frameshifted)       :: 25 of 150
            Pseudo Genes (incomplete)         :: 128 of 150
            Pseudo Genes (internal stop)      :: 14 of 150
            Pseudo Genes (multiple problems)  :: 14 of 150
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5388241
                     /organism="Klebsiella ornithinolytica"
                     /mol_type="genomic DNA"
                     /strain="YDC775_6"
                     /isolation_source="Abdominal abscess"
                     /host="Homo sapiens"
                     /db_xref="taxon:54291"
                     /geo_loc_name="USA: Pittsburgh"
                     /lat_lon="40.44 N 79.96 W"
                     /collection_date="2016-04"
                     /collected_by="University of Pittsburgh"
WGS         RJTS01000001-RJTS01000316
WGS_SCAFLD  NZ_RJTS01000001-NZ_RJTS01000316
//
LOCUS       NZ_LRTL01000000      2877807 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Flavobacterium psychrophilum strain 4, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LRTL00000000
VERSION     NZ_LRTL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02941919
            Assembly: GCF_000971785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Flavobacterium psychrophilum
  ORGANISM  Flavobacterium psychrophilum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (bases 1 to 2877807)
  AUTHORS   Castillo,D., Christiansen,R., Dalsgaard,I., Madsen,L., Espejo,R.
            and Middelboe,M.
  TITLE     Comparative genome analysis provides insights into the
            pathogenicity of Flavobacterium psychrophilum
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2877807)
  AUTHORS   Castillo,D., Christiansen,R., Dalsgaard,I., Madsen,L., Espejo,R.
            and Middelboe,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JAN-2016) Marine Biological Section, University of
            Copenhagen, Strandpromenaden 5, Helsingor 3000, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LRTL00000000.1.
            The Flavobacterium psychrophilum whole genome shotgun (WGS) project
            has the project accession NZ_LRTL00000000.  This version of the
            project (01) has the accession number NZ_LRTL01000000, and consists
            of sequences LRTL01000001-LRTL01000024.
            
            This WGS project replaces CP010798, which was incorrectly submitted
            as a complete genome.
            
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2015
            Assembly Method        :: Geneious method v. 9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 79.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000971785.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:44:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,673
            CDSs (total)                      :: 2,629
            Genes (coding)                    :: 2,595
            CDSs (with protein)               :: 2,595
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (5S, 16S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 1 of 35
            Pseudo Genes (frameshifted)       :: 8 of 35
            Pseudo Genes (incomplete)         :: 24 of 35
            Pseudo Genes (internal stop)      :: 5 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2877807
                     /organism="Flavobacterium psychrophilum"
                     /mol_type="genomic DNA"
                     /strain="4"
                     /isolation_source="fish farm freshwater"
                     /db_xref="taxon:96345"
                     /geo_loc_name="Chile"
                     /collection_date="2013-01-10"
WGS         LRTL01000001-LRTL01000024
WGS_SCAFLD  NZ_LRTL01000001-NZ_LRTL01000024
//
LOCUS       NZ_JAKMHH010000000   1659646 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Helicobacter pylori strain MA175, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAKMHH000000000
VERSION     NZ_JAKMHH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN25529503
            Assembly: GCF_022015995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori
  ORGANISM  Helicobacter pylori
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1659646)
  AUTHORS   Akar,M., Saticioglu,I.B., Karakaya,E., Kayman,T., Abay,S.,
            Solakoglu,T., Vale,F.F. and Aydin,F.
  TITLE     Two novel sequence types of Helicobacter pylori strains: The first
            report from Turkey
  JOURNAL   Helicobacter 27 (4), e12907 (2022)
   PUBMED   35604361
REFERENCE   2  (bases 1 to 1659646)
  AUTHORS   Akar,M., Karakaya,E., Kayman,T., Abay,S., Solakoglu,T.,
            Saticioglu,I.B. and Aydin,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-FEB-2022) Microbiology, Erciyes Univ. Faculty of
            Veterinary Medicine, Yeni Dogan Mah Hulusi Behcet Caddesi No 55,
            Kayseri 38280, Turkey
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKMHH000000000.1.
            The Helicobacter pylori whole genome shotgun (WGS) project has the
            project accession NZ_JAKMHH000000000.  This version of the project
            (01) has the accession number NZ_JAKMHH010000000, and consists of
            sequences JAKMHH010000001-JAKMHH010000020.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 07-JUL-2021
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 121.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022015995.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:09:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,620
            CDSs (total)                      :: 1,578
            Genes (coding)                    :: 1,502
            CDSs (with protein)               :: 1,502
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 41 of 76
            Pseudo Genes (incomplete)         :: 35 of 76
            Pseudo Genes (internal stop)      :: 10 of 76
            Pseudo Genes (multiple problems)  :: 9 of 76
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1659646
                     /organism="Helicobacter pylori"
                     /mol_type="genomic DNA"
                     /strain="MA175"
                     /isolation_source="Gastric biopsy specimen"
                     /host="Homo sapiens"
                     /db_xref="taxon:210"
                     /geo_loc_name="Turkey: Bursa"
                     /lat_lon="40.18515065 N 29.12951922 E"
                     /collection_date="2019"
                     /collected_by="Mustafa AKAR"
WGS         JAKMHH010000001-JAKMHH010000020
WGS_SCAFLD  NZ_JAKMHH010000001-NZ_JAKMHH010000020
//
LOCUS       NZ_FNJC01000000      3845879 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Filomicrobium insigne strain CGMCC 1.6497, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNJC00000000
VERSION     NZ_FNJC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04488061
            Assembly: GCF_900104305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Filomicrobium insigne
  ORGANISM  Filomicrobium insigne
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Hyphomicrobiaceae; Filomicrobium.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNJC00000000.1.
            The Filomicrobium insigne whole genome shotgun (WGS) project has
            the project accession NZ_FNJC00000000.  This version of the project
            (01) has the accession number NZ_FNJC01000000, and consists of
            sequences FNJC01000001-FNJC01000010.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900104305.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:00:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,572
            CDSs (total)                      :: 3,516
            Genes (coding)                    :: 3,494
            CDSs (with protein)               :: 3,494
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 4 of 22
            Pseudo Genes (incomplete)         :: 17 of 22
            Pseudo Genes (internal stop)      :: 4 of 22
            Pseudo Genes (multiple problems)  :: 3 of 22
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3845879
                     /organism="Filomicrobium insigne"
                     /mol_type="genomic DNA"
                     /strain="CGMCC 1.6497"
                     /type_material="type strain of Filomicrobium insigne"
                     /db_xref="taxon:418854"
WGS         FNJC01000001-FNJC01000010
WGS_SCAFLD  NZ_FNJC01000001-NZ_FNJC01000010
//
LOCUS       NZ_VNTB01000000      6134053 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella michiganensis strain 620277132808, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VNTB00000000
VERSION     NZ_VNTB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12212085
            Assembly: GCF_020117595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 6134053)
  AUTHORS   Cuenod,A., Wuthrich,D., Seth-Smith,H.M.B., Ott,C., Gehringer,C.,
            Foucault,F., Mouchet,R., Kassim,A., Revathi,G., Vogt,D.R., von
            Felten,S., Bassetti,S., Tschudin-Sutter,S., Hettich,T.,
            Schlotterbeck,G., Homberger,C., Casanova,C., Moran-Gilad,J.,
            Sagi,O., Rodriguez-Sanchez,B., Muller,F., Aerni,M., Gaia,V., van
            Dessel,H., Kampinga,G.A., Muller,C., Daubenberger,C., Pfluger,V.
            and Egli,A.
  TITLE     Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal
            importance of Klebsiella oxytoca group in invasive infections: a
            retrospective clinical study
  JOURNAL   Genome Med 13 (1), 150 (2021)
   PUBMED   34517886
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6134053)
  AUTHORS   Cuenod,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2019) Department of Biomedicine, University of
            Basel, Hebelstrasse 20, Basel, BS 4051, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VNTB00000000.1.
            The Klebsiella michiganensis whole genome shotgun (WGS) project has
            the project accession NZ_VNTB00000000.  This version of the project
            (01) has the accession number NZ_VNTB01000000, and consists of
            sequences VNTB01000001-VNTB01000119.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 60x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_020117595.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:24:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,883
            CDSs (total)                      :: 5,793
            Genes (coding)                    :: 5,671
            CDSs (with protein)               :: 5,671
            Genes (RNA)                       :: 90
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 122
            CDSs (without protein)            :: 122
            Pseudo Genes (ambiguous residues) :: 0 of 122
            Pseudo Genes (frameshifted)       :: 45 of 122
            Pseudo Genes (incomplete)         :: 93 of 122
            Pseudo Genes (internal stop)      :: 15 of 122
            Pseudo Genes (multiple problems)  :: 26 of 122
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6134053
                     /organism="Klebsiella michiganensis"
                     /mol_type="genomic DNA"
                     /strain="620277132808"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:1134687"
                     /geo_loc_name="Switzerland"
                     /lat_lon="47.591077 N 7.652974 E"
                     /collection_date="2017"
WGS         VNTB01000001-VNTB01000119
WGS_SCAFLD  NZ_VNTB01000001-NZ_VNTB01000119
//
LOCUS       NZ_FNOT01000000      5470950 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Geodermatophilus africanus strain DSM 45422, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNOT00000000
VERSION     NZ_FNOT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05660209
            Assembly: GCF_900107105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Geodermatophilus africanus
  ORGANISM  Geodermatophilus africanus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Geodermatophilus.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNOT00000000.1.
            The Geodermatophilus africanus whole genome shotgun (WGS) project
            has the project accession NZ_FNOT00000000.  This version of the
            project (01) has the accession number NZ_FNOT01000000, and consists
            of sequences FNOT01000001-FNOT01000052.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900107105.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:04:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,283
            CDSs (total)                      :: 5,216
            Genes (coding)                    :: 5,099
            CDSs (with protein)               :: 5,099
            Genes (RNA)                       :: 67
            rRNAs                             :: 4, 5, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 23S)
            partial rRNAs                     :: 5, 1 (16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 20 of 117
            Pseudo Genes (incomplete)         :: 104 of 117
            Pseudo Genes (internal stop)      :: 9 of 117
            Pseudo Genes (multiple problems)  :: 15 of 117
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5470950
                     /organism="Geodermatophilus africanus"
                     /mol_type="genomic DNA"
                     /strain="DSM 45422"
                     /type_material="type strain of Geodermatophilus africanus"
                     /db_xref="taxon:1137993"
WGS         FNOT01000001-FNOT01000052
WGS_SCAFLD  NZ_FNOT01000001-NZ_FNOT01000052
//
LOCUS       NZ_FOLI01000000      1327392 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Fructobacillus durionis strain DSM 19113, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOLI00000000
VERSION     NZ_FOLI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05660453
            Assembly: GCF_900112405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Fructobacillus durionis
  ORGANISM  Fructobacillus durionis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Fructobacillus.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOLI00000000.1.
            The Fructobacillus durionis whole genome shotgun (WGS) project has
            the project accession NZ_FOLI00000000.  This version of the project
            (01) has the accession number NZ_FOLI01000000, and consists of
            sequences FOLI01000001-FOLI01000017.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900112405.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:08:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,324
            CDSs (total)                      :: 1,262
            Genes (coding)                    :: 1,257
            CDSs (with protein)               :: 1,257
            Genes (RNA)                       :: 62
            rRNAs                             :: 5, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1327392
                     /organism="Fructobacillus durionis"
                     /mol_type="genomic DNA"
                     /strain="DSM 19113"
                     /type_material="type strain of Leuconostoc durionis"
                     /db_xref="taxon:283737"
WGS         FOLI01000001-FOLI01000017
WGS_SCAFLD  NZ_FOLI01000001-NZ_FOLI01000017
//
LOCUS       NZ_VNUD01000000      6101954 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella michiganensis strain 706508-16, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VNUD00000000
VERSION     NZ_VNUD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12212269
            Assembly: GCF_020117015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 6101954)
  AUTHORS   Cuenod,A., Wuthrich,D., Seth-Smith,H.M.B., Ott,C., Gehringer,C.,
            Foucault,F., Mouchet,R., Kassim,A., Revathi,G., Vogt,D.R., von
            Felten,S., Bassetti,S., Tschudin-Sutter,S., Hettich,T.,
            Schlotterbeck,G., Homberger,C., Casanova,C., Moran-Gilad,J.,
            Sagi,O., Rodriguez-Sanchez,B., Muller,F., Aerni,M., Gaia,V., van
            Dessel,H., Kampinga,G.A., Muller,C., Daubenberger,C., Pfluger,V.
            and Egli,A.
  TITLE     Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal
            importance of Klebsiella oxytoca group in invasive infections: a
            retrospective clinical study
  JOURNAL   Genome Med 13 (1), 150 (2021)
   PUBMED   34517886
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6101954)
  AUTHORS   Cuenod,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2019) Department of Biomedicine, University of
            Basel, Hebelstrasse 20, Basel, BS 4051, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VNUD00000000.1.
            The Klebsiella michiganensis whole genome shotgun (WGS) project has
            the project accession NZ_VNUD00000000.  This version of the project
            (01) has the accession number NZ_VNUD01000000, and consists of
            sequences VNUD01000001-VNUD01000111.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 60x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_020117015.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:27:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,852
            CDSs (total)                      :: 5,760
            Genes (coding)                    :: 5,634
            CDSs (with protein)               :: 5,634
            Genes (RNA)                       :: 92
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 77
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 126
            CDSs (without protein)            :: 126
            Pseudo Genes (ambiguous residues) :: 0 of 126
            Pseudo Genes (frameshifted)       :: 38 of 126
            Pseudo Genes (incomplete)         :: 85 of 126
            Pseudo Genes (internal stop)      :: 23 of 126
            Pseudo Genes (multiple problems)  :: 16 of 126
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6101954
                     /organism="Klebsiella michiganensis"
                     /mol_type="genomic DNA"
                     /strain="706508-16"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:1134687"
                     /geo_loc_name="Switzerland"
                     /lat_lon="47.562446 N 7.583217 E"
                     /collection_date="2016"
WGS         VNUD01000001-VNUD01000111
WGS_SCAFLD  NZ_VNUD01000001-NZ_VNUD01000111
//
LOCUS       NZ_FNJF01000000      4087953 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Eubacterium maltosivorans strain 32_A2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNJF00000000
VERSION     NZ_FNJF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04515624
            Assembly: GCF_900103155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Eubacterium maltosivorans
  ORGANISM  Eubacterium maltosivorans
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Eubacteriaceae; Eubacterium.
REFERENCE   1  (bases 1 to 4087953)
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNJF00000000.1.
            The Eubacterium maltosivorans whole genome shotgun (WGS) project
            has the project accession NZ_FNJF00000000.  This version of the
            project (01) has the accession number NZ_FNJF01000000, and consists
            of sequences FNJF01000001-FNJF01000087.
            The organism was changed from 'Eubacterium limosum' to 'Eubacterium
            maltosivorans' in July  2020.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_900103155.1
            Current Name        :: Eubacterium maltosivorans
            Previous Name       :: Eubacterium limosum
            Date Updated        :: 2020-07-30
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_002441855.2
            A1 Name             :: Eubacterium maltosivorans
            A1 ANI              :: 98.58%
            A1 Query Coverage   :: 89.29%
            A1 Subject Coverage :: 84.16%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_000807675.2
            A2 Name             :: Eubacterium limosum
            A2 ANI              :: 90.03%
            A2 Query Coverage   :: 78.94%
            A2 Subject Coverage :: 72.96%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900103155.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:58:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,958
            CDSs (total)                      :: 3,895
            Genes (coding)                    :: 3,871
            CDSs (with protein)               :: 3,871
            Genes (RNA)                       :: 63
            rRNAs                             :: 4, 6, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 5, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 7 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 5 of 24
            Pseudo Genes (multiple problems)  :: 6 of 24
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4087953
                     /organism="Eubacterium maltosivorans"
                     /mol_type="genomic DNA"
                     /strain="32_A2"
                     /db_xref="taxon:2041044"
WGS         FNJF01000001-FNJF01000087
WGS_SCAFLD  NZ_FNJF01000001-NZ_FNJF01000087
//
LOCUS       NZ_VNSJ01000000      5983308 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella michiganensis strain 620256896681, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VNSJ00000000
VERSION     NZ_VNSJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12212070
            Assembly: GCF_020117955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 5983308)
  AUTHORS   Cuenod,A., Wuthrich,D., Seth-Smith,H.M.B., Ott,C., Gehringer,C.,
            Foucault,F., Mouchet,R., Kassim,A., Revathi,G., Vogt,D.R., von
            Felten,S., Bassetti,S., Tschudin-Sutter,S., Hettich,T.,
            Schlotterbeck,G., Homberger,C., Casanova,C., Moran-Gilad,J.,
            Sagi,O., Rodriguez-Sanchez,B., Muller,F., Aerni,M., Gaia,V., van
            Dessel,H., Kampinga,G.A., Muller,C., Daubenberger,C., Pfluger,V.
            and Egli,A.
  TITLE     Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal
            importance of Klebsiella oxytoca group in invasive infections: a
            retrospective clinical study
  JOURNAL   Genome Med 13 (1), 150 (2021)
   PUBMED   34517886
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5983308)
  AUTHORS   Cuenod,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2019) Department of Biomedicine, University of
            Basel, Hebelstrasse 20, Basel, BS 4051, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VNSJ00000000.1.
            The Klebsiella michiganensis whole genome shotgun (WGS) project has
            the project accession NZ_VNSJ00000000.  This version of the project
            (01) has the accession number NZ_VNSJ01000000, and consists of
            sequences VNSJ01000001-VNSJ01000101.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 60x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_020117955.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:32:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,738
            CDSs (total)                      :: 5,650
            Genes (coding)                    :: 5,533
            CDSs (with protein)               :: 5,533
            Genes (RNA)                       :: 88
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 45 of 117
            Pseudo Genes (incomplete)         :: 83 of 117
            Pseudo Genes (internal stop)      :: 12 of 117
            Pseudo Genes (multiple problems)  :: 20 of 117
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5983308
                     /organism="Klebsiella michiganensis"
                     /mol_type="genomic DNA"
                     /strain="620256896681"
                     /isolation_source="Superficial Wound Swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:1134687"
                     /geo_loc_name="Switzerland"
                     /lat_lon="47.591077 N 7.652974 E"
                     /collection_date="2017"
WGS         VNSJ01000001-VNSJ01000101
WGS_SCAFLD  NZ_VNSJ01000001-NZ_VNSJ01000101
//
LOCUS       NZ_FOBC01000000      3716193 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Halomonas daqiaonensis strain CGMCC 1.9150, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOBC00000000
VERSION     NZ_FOBC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04488129
            Assembly: GCF_900109725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Halomonas daqiaonensis
  ORGANISM  Halomonas daqiaonensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Halomonas.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOBC00000000.1.
            The Halomonas daqiaonensis whole genome shotgun (WGS) project has
            the project accession NZ_FOBC00000000.  This version of the project
            (01) has the accession number NZ_FOBC01000000, and consists of
            sequences FOBC01000001-FOBC01000046.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900109725.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:18:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,539
            CDSs (total)                      :: 3,468
            Genes (coding)                    :: 3,390
            CDSs (with protein)               :: 3,390
            Genes (RNA)                       :: 71
            rRNAs                             :: 4, 3, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 2, 6 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 16 of 78
            Pseudo Genes (incomplete)         :: 58 of 78
            Pseudo Genes (internal stop)      :: 18 of 78
            Pseudo Genes (multiple problems)  :: 13 of 78
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3716193
                     /organism="Halomonas daqiaonensis"
                     /mol_type="genomic DNA"
                     /strain="CGMCC 1.9150"
                     /type_material="type strain of Halomonas daqiaonensis"
                     /db_xref="taxon:650850"
WGS         FOBC01000001-FOBC01000046
WGS_SCAFLD  NZ_FOBC01000001-NZ_FOBC01000046
//
LOCUS       NZ_VNMZ01000000      6029859 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella michiganensis strain 128489-17, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VNMZ00000000
VERSION     NZ_VNMZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12212107
            Assembly: GCF_020121095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 6029859)
  AUTHORS   Cuenod,A., Wuthrich,D., Seth-Smith,H.M.B., Ott,C., Gehringer,C.,
            Foucault,F., Mouchet,R., Kassim,A., Revathi,G., Vogt,D.R., von
            Felten,S., Bassetti,S., Tschudin-Sutter,S., Hettich,T.,
            Schlotterbeck,G., Homberger,C., Casanova,C., Moran-Gilad,J.,
            Sagi,O., Rodriguez-Sanchez,B., Muller,F., Aerni,M., Gaia,V., van
            Dessel,H., Kampinga,G.A., Muller,C., Daubenberger,C., Pfluger,V.
            and Egli,A.
  TITLE     Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal
            importance of Klebsiella oxytoca group in invasive infections: a
            retrospective clinical study
  JOURNAL   Genome Med 13 (1), 150 (2021)
   PUBMED   34517886
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6029859)
  AUTHORS   Cuenod,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2019) Department of Biomedicine, University of
            Basel, Hebelstrasse 20, Basel, BS 4051, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VNMZ00000000.1.
            The Klebsiella michiganensis whole genome shotgun (WGS) project has
            the project accession NZ_VNMZ00000000.  This version of the project
            (01) has the accession number NZ_VNMZ01000000, and consists of
            sequences VNMZ01000001-VNMZ01000134.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 60x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_020121095.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:35:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,756
            CDSs (total)                      :: 5,666
            Genes (coding)                    :: 5,537
            CDSs (with protein)               :: 5,537
            Genes (RNA)                       :: 90
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2 (5S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 129
            CDSs (without protein)            :: 129
            Pseudo Genes (ambiguous residues) :: 0 of 129
            Pseudo Genes (frameshifted)       :: 38 of 129
            Pseudo Genes (incomplete)         :: 101 of 129
            Pseudo Genes (internal stop)      :: 20 of 129
            Pseudo Genes (multiple problems)  :: 24 of 129
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6029859
                     /organism="Klebsiella michiganensis"
                     /mol_type="genomic DNA"
                     /strain="128489-17"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:1134687"
                     /geo_loc_name="Switzerland"
                     /lat_lon="47.562446 N 7.583217 E"
                     /collection_date="2017"
WGS         VNMZ01000001-VNMZ01000134
WGS_SCAFLD  NZ_VNMZ01000001-NZ_VNMZ01000134
//
LOCUS       NZ_FOWQ01000000      4688495 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Geodermatophilus dictyosporus strain DSM 44208, whole genome
            shotgun sequencing project.
ACCESSION   NZ_FOWQ00000000
VERSION     NZ_FOWQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05660464
            Assembly: GCF_900115505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Geodermatophilus dictyosporus
  ORGANISM  Geodermatophilus dictyosporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Geodermatophilus.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOWQ00000000.1.
            The Geodermatophilus dictyosporus whole genome shotgun (WGS)
            project has the project accession NZ_FOWQ00000000.  This version of
            the project (01) has the accession number NZ_FOWQ01000000, and
            consists of sequences FOWQ01000001-FOWQ01000016.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900115505.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:18:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,559
            CDSs (total)                      :: 4,499
            Genes (coding)                    :: 4,445
            CDSs (with protein)               :: 4,445
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 8 of 54
            Pseudo Genes (incomplete)         :: 50 of 54
            Pseudo Genes (internal stop)      :: 1 of 54
            Pseudo Genes (multiple problems)  :: 5 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4688495
                     /organism="Geodermatophilus dictyosporus"
                     /mol_type="genomic DNA"
                     /strain="DSM 44208"
                     /db_xref="taxon:1523247"
WGS         FOWQ01000001-FOWQ01000016
WGS_SCAFLD  NZ_FOWQ01000001-NZ_FOWQ01000016
//
LOCUS       NZ_LVZF01000000      1889881 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus influenzae strain GE49, whole genome shotgun sequencing
            project.
ACCESSION   NZ_LVZF00000000
VERSION     NZ_LVZF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04590165
            Assembly: GCF_002093185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (bases 1 to 1889881)
  AUTHORS   Cherkaoui,A., Diene,S.M., Renzoni,A., Emonet,S., Renzi,G.,
            Francois,P. and Schrenzel,J.
  TITLE     Imipenem heteroresistance in nontypeable Haemophilus influenzae is
            linked to a combination of altered PBP3, slow drug influx and
            direct efflux regulation
  JOURNAL   Clin Microbiol Infect 23 (2), 118 (2017)
   PUBMED   27756711
REFERENCE   2  (bases 1 to 1889881)
  AUTHORS   Diene,S.M., Francois,P. and Cherkaoui,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAR-2016) University Hospital of Geneva (HUG),
            Genomic Research Laboratory (GRL), Rue Gabrielle-Perret-Gentil 4,
            Geneva 1205, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LVZF00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_LVZF00000000.  This version of the project
            (01) has the accession number NZ_LVZF01000000, and consists of
            sequences LVZF01000001-LVZF01000030.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Edena v. 3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 523.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002093185.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:28:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,926
            CDSs (total)                      :: 1,847
            Genes (coding)                    :: 1,788
            CDSs (with protein)               :: 1,788
            Genes (RNA)                       :: 79
            rRNAs                             :: 7, 5, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 16S)
            partial rRNAs                     :: 4, 10 (16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 20 of 59
            Pseudo Genes (incomplete)         :: 44 of 59
            Pseudo Genes (internal stop)      :: 10 of 59
            Pseudo Genes (multiple problems)  :: 11 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1889881
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /strain="GE49"
                     /isolation_source="bronchoalveolar lavage"
                     /host="Homo sapiens"
                     /db_xref="taxon:727"
                     /geo_loc_name="Switzerland: Geneva"
                     /lat_lon="46.1936 N 6.1489 E"
                     /collection_date="2011"
                     /collected_by="Bacteriology lab of HUG"
WGS         LVZF01000001-LVZF01000030
WGS_SCAFLD  NZ_LVZF01000001-NZ_LVZF01000030
//
LOCUS       NZ_UEUD01000000      1900865 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus influenzae isolate PTHi-12485, whole genome shotgun
            sequencing project.
ACCESSION   NZ_UEUD00000000
VERSION     NZ_UEUD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA4643488
            Assembly: GCF_900407615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1
  CONSRTM   Bioinformatics Unit on Microbial Genomics of the Portuguese NIH
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAY-2018) NATIONAL INSTITUTE OF HEALTH DR. RICARDO
            JORGE, Bioinformatics Unit, Avenida Padre Cruz, 1649-016 Lisboa,
            Portugal, Portugal
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            UEUD00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_UEUD00000000.  This version of the project
            (01) has the accession number NZ_UEUD01000000, and consists of
            sequences UEUD01000001-UEUD01000027.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900407615.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:42:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,927
            CDSs (total)                      :: 1,856
            Genes (coding)                    :: 1,797
            CDSs (with protein)               :: 1,797
            Genes (RNA)                       :: 71
            rRNAs                             :: 8, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 28 of 59
            Pseudo Genes (incomplete)         :: 36 of 59
            Pseudo Genes (internal stop)      :: 14 of 59
            Pseudo Genes (multiple problems)  :: 16 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900865
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /serotype="NT"
                     /isolate="PTHi-12485"
                     /db_xref="taxon:727"
WGS         UEUD01000001-UEUD01000027
WGS_SCAFLD  NZ_UEUD01000001-NZ_UEUD01000027
//
LOCUS       NZ_VNQT01000000      6202585 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella michiganensis strain 500137-17, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VNQT00000000
VERSION     NZ_VNQT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12212205
            Assembly: GCF_020118955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 6202585)
  AUTHORS   Cuenod,A., Wuthrich,D., Seth-Smith,H.M.B., Ott,C., Gehringer,C.,
            Foucault,F., Mouchet,R., Kassim,A., Revathi,G., Vogt,D.R., von
            Felten,S., Bassetti,S., Tschudin-Sutter,S., Hettich,T.,
            Schlotterbeck,G., Homberger,C., Casanova,C., Moran-Gilad,J.,
            Sagi,O., Rodriguez-Sanchez,B., Muller,F., Aerni,M., Gaia,V., van
            Dessel,H., Kampinga,G.A., Muller,C., Daubenberger,C., Pfluger,V.
            and Egli,A.
  TITLE     Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal
            importance of Klebsiella oxytoca group in invasive infections: a
            retrospective clinical study
  JOURNAL   Genome Med 13 (1), 150 (2021)
   PUBMED   34517886
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6202585)
  AUTHORS   Cuenod,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2019) Department of Biomedicine, University of
            Basel, Hebelstrasse 20, Basel, BS 4051, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VNQT00000000.1.
            The Klebsiella michiganensis whole genome shotgun (WGS) project has
            the project accession NZ_VNQT00000000.  This version of the project
            (01) has the accession number NZ_VNQT01000000, and consists of
            sequences VNQT01000001-VNQT01000128.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 60x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_020118955.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:35:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,020
            CDSs (total)                      :: 5,931
            Genes (coding)                    :: 5,806
            CDSs (with protein)               :: 5,806
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 76
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 125
            CDSs (without protein)            :: 125
            Pseudo Genes (ambiguous residues) :: 0 of 125
            Pseudo Genes (frameshifted)       :: 51 of 125
            Pseudo Genes (incomplete)         :: 90 of 125
            Pseudo Genes (internal stop)      :: 13 of 125
            Pseudo Genes (multiple problems)  :: 26 of 125
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6202585
                     /organism="Klebsiella michiganensis"
                     /mol_type="genomic DNA"
                     /strain="500137-17"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1134687"
                     /geo_loc_name="Switzerland"
                     /lat_lon="47.562446 N 7.583217 E"
                     /collection_date="2017"
WGS         VNQT01000001-VNQT01000128
WGS_SCAFLD  NZ_VNQT01000001-NZ_VNQT01000128
//
LOCUS       NZ_UEWX01000000      1819793 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus influenzae isolate PTHi-5962, whole genome shotgun
            sequencing project.
ACCESSION   NZ_UEWX00000000
VERSION     NZ_UEWX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA4643455
            Assembly: GCF_900408175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1
  CONSRTM   Bioinformatics Unit on Microbial Genomics of the Portuguese NIH
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAY-2018) NATIONAL INSTITUTE OF HEALTH DR. RICARDO
            JORGE, Bioinformatics Unit, Avenida Padre Cruz, 1649-016 Lisboa,
            Portugal, Portugal
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            UEWX00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_UEWX00000000.  This version of the project
            (01) has the accession number NZ_UEWX01000000, and consists of
            sequences UEWX01000001-UEWX01000016.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900408175.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:42:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,829
            CDSs (total)                      :: 1,755
            Genes (coding)                    :: 1,701
            CDSs (with protein)               :: 1,701
            Genes (RNA)                       :: 74
            rRNAs                             :: 8, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 25 of 54
            Pseudo Genes (incomplete)         :: 38 of 54
            Pseudo Genes (internal stop)      :: 9 of 54
            Pseudo Genes (multiple problems)  :: 12 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1819793
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /serotype="NT"
                     /isolate="PTHi-5962"
                     /db_xref="taxon:727"
WGS         UEWX01000001-UEWX01000016
WGS_SCAFLD  NZ_UEWX01000001-NZ_UEWX01000016
//
LOCUS       NZ_VNUO01000000      6071618 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella michiganensis strain 710217-17, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VNUO00000000
VERSION     NZ_VNUO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12212280
            Assembly: GCF_020116815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 6071618)
  AUTHORS   Cuenod,A., Wuthrich,D., Seth-Smith,H.M.B., Ott,C., Gehringer,C.,
            Foucault,F., Mouchet,R., Kassim,A., Revathi,G., Vogt,D.R., von
            Felten,S., Bassetti,S., Tschudin-Sutter,S., Hettich,T.,
            Schlotterbeck,G., Homberger,C., Casanova,C., Moran-Gilad,J.,
            Sagi,O., Rodriguez-Sanchez,B., Muller,F., Aerni,M., Gaia,V., van
            Dessel,H., Kampinga,G.A., Muller,C., Daubenberger,C., Pfluger,V.
            and Egli,A.
  TITLE     Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal
            importance of Klebsiella oxytoca group in invasive infections: a
            retrospective clinical study
  JOURNAL   Genome Med 13 (1), 150 (2021)
   PUBMED   34517886
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6071618)
  AUTHORS   Cuenod,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2019) Department of Biomedicine, University of
            Basel, Hebelstrasse 20, Basel, BS 4051, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VNUO00000000.1.
            The Klebsiella michiganensis whole genome shotgun (WGS) project has
            the project accession NZ_VNUO00000000.  This version of the project
            (01) has the accession number NZ_VNUO01000000, and consists of
            sequences VNUO01000001-VNUO01000116.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 60x
            Sequencing Technology  :: Ilumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_020116815.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:33:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,791
            CDSs (total)                      :: 5,703
            Genes (coding)                    :: 5,580
            CDSs (with protein)               :: 5,580
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 75
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 46 of 123
            Pseudo Genes (incomplete)         :: 93 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 30 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6071618
                     /organism="Klebsiella michiganensis"
                     /mol_type="genomic DNA"
                     /strain="710217-17"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:1134687"
                     /geo_loc_name="Switzerland"
                     /lat_lon="47.562446 N 7.583217 E"
                     /collection_date="2017"
WGS         VNUO01000001-VNUO01000116
WGS_SCAFLD  NZ_VNUO01000001-NZ_VNUO01000116
//
LOCUS       NZ_FNLM01000000      6405003 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Gordonia westfalica strain DSM 44215, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNLM00000000
VERSION     NZ_FNLM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04488548
            Assembly: GCF_900105725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Gordonia westfalica
  ORGANISM  Gordonia westfalica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Gordoniaceae; Gordonia.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNLM00000000.1.
            The Gordonia westfalica whole genome shotgun (WGS) project has the
            project accession NZ_FNLM00000000.  This version of the project
            (01) has the accession number NZ_FNLM01000000, and consists of
            sequences FNLM01000001-FNLM01000038.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900105725.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:31:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,434
            CDSs (total)                      :: 6,366
            Genes (coding)                    :: 6,069
            CDSs (with protein)               :: 6,069
            Genes (RNA)                       :: 68
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 4, 5 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 50
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 297
            CDSs (without protein)            :: 297
            Pseudo Genes (ambiguous residues) :: 0 of 297
            Pseudo Genes (frameshifted)       :: 203 of 297
            Pseudo Genes (incomplete)         :: 112 of 297
            Pseudo Genes (internal stop)      :: 11 of 297
            Pseudo Genes (multiple problems)  :: 28 of 297
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6405003
                     /organism="Gordonia westfalica"
                     /mol_type="genomic DNA"
                     /strain="DSM 44215"
                     /type_material="type strain of Gordonia westfalica"
                     /db_xref="taxon:158898"
WGS         FNLM01000001-FNLM01000038
WGS_SCAFLD  NZ_FNLM01000001-NZ_FNLM01000038
//
LOCUS       NZ_QQJO01000000      1871651 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus influenzae strain M10469, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QQJO00000000
VERSION     NZ_QQJO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09704882
            Assembly: GCF_003493835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (bases 1 to 1871651)
  AUTHORS   Topaz,N., Boxrud,D., Retchless,A.C., Nichols,M., Chang,H.Y., Hu,F.
            and Wang,X.
  TITLE     BMScan: using whole genome similarity to rapidly and accurately
            identify bacterial meningitis causing species
  JOURNAL   BMC Infect Dis 18 (1), 405 (2018)
   PUBMED   30111301
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1871651)
  AUTHORS   Topaz,N., Retchless,A.C., Chang,H.-Y., Hu,F. and Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUL-2018) Bacterial Meningitis Lab, Centers for
            Disease Control and Prevention, 1600 Clifton Rd, Atlanta, GA 30333,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QQJO00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_QQJO00000000.  This version of the project
            (01) has the accession number NZ_QQJO01000000, and consists of
            sequences QQJO01000001-QQJO01000021.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 165.33934442030053x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003493835.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:46:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,889
            CDSs (total)                      :: 1,813
            Genes (coding)                    :: 1,756
            CDSs (with protein)               :: 1,756
            Genes (RNA)                       :: 76
            rRNAs                             :: 8, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 16S)
            partial rRNAs                     :: 1, 5, 6 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 22 of 57
            Pseudo Genes (incomplete)         :: 42 of 57
            Pseudo Genes (internal stop)      :: 9 of 57
            Pseudo Genes (multiple problems)  :: 10 of 57
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1871651
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /strain="M10469"
                     /host="Homo sapiens"
                     /db_xref="taxon:727"
                     /collected_by="Centers for Disease Control and Prevention"
WGS         QQJO01000001-QQJO01000021
WGS_SCAFLD  NZ_QQJO01000001-NZ_QQJO01000021
//
LOCUS       NZ_QQJR01000000      1859576 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus influenzae strain M11840, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QQJR00000000
VERSION     NZ_QQJR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09704889
            Assembly: GCF_003493785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (bases 1 to 1859576)
  AUTHORS   Topaz,N., Boxrud,D., Retchless,A.C., Nichols,M., Chang,H.Y., Hu,F.
            and Wang,X.
  TITLE     BMScan: using whole genome similarity to rapidly and accurately
            identify bacterial meningitis causing species
  JOURNAL   BMC Infect Dis 18 (1), 405 (2018)
   PUBMED   30111301
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1859576)
  AUTHORS   Topaz,N., Retchless,A.C., Chang,H.-Y., Hu,F. and Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUL-2018) Bacterial Meningitis Lab, Centers for
            Disease Control and Prevention, 1600 Clifton Rd, Atlanta, GA 30333,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QQJR00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_QQJR00000000.  This version of the project
            (01) has the accession number NZ_QQJR01000000, and consists of
            sequences QQJR01000001-QQJR01000017.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 162.81283749380185x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003493785.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:45:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,866
            CDSs (total)                      :: 1,789
            Genes (coding)                    :: 1,732
            CDSs (with protein)               :: 1,732
            Genes (RNA)                       :: 77
            rRNAs                             :: 7, 6, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 16S)
            partial rRNAs                     :: 5, 9 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 30 of 57
            Pseudo Genes (incomplete)         :: 34 of 57
            Pseudo Genes (internal stop)      :: 10 of 57
            Pseudo Genes (multiple problems)  :: 12 of 57
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1859576
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /strain="M11840"
                     /host="Homo sapiens"
                     /db_xref="taxon:727"
                     /collected_by="Centers for Disease Control and Prevention"
WGS         QQJR01000001-QQJR01000017
WGS_SCAFLD  NZ_QQJR01000001-NZ_QQJR01000017
//
LOCUS       NZ_UEWB01000000      1893333 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus influenzae isolate PTHi-1402, whole genome shotgun
            sequencing project.
ACCESSION   NZ_UEWB00000000
VERSION     NZ_UEWB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA4643425
            Assembly: GCF_900407805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1
  CONSRTM   Bioinformatics Unit on Microbial Genomics of the Portuguese NIH
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAY-2018) NATIONAL INSTITUTE OF HEALTH DR. RICARDO
            JORGE, Bioinformatics Unit, Avenida Padre Cruz, 1649-016 Lisboa,
            Portugal, Portugal
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            UEWB00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_UEWB00000000.  This version of the project
            (01) has the accession number NZ_UEWB01000000, and consists of
            sequences UEWB01000001-UEWB01000029.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900407805.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:53:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,925
            CDSs (total)                      :: 1,854
            Genes (coding)                    :: 1,796
            CDSs (with protein)               :: 1,796
            Genes (RNA)                       :: 71
            rRNAs                             :: 8, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 58
            CDSs (without protein)            :: 58
            Pseudo Genes (ambiguous residues) :: 0 of 58
            Pseudo Genes (frameshifted)       :: 17 of 58
            Pseudo Genes (incomplete)         :: 45 of 58
            Pseudo Genes (internal stop)      :: 8 of 58
            Pseudo Genes (multiple problems)  :: 12 of 58
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1893333
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /serotype="NT"
                     /isolate="PTHi-1402"
                     /db_xref="taxon:727"
WGS         UEWB01000001-UEWB01000029
WGS_SCAFLD  NZ_UEWB01000001-NZ_UEWB01000029
//
LOCUS       NZ_JAKWHM010000000   6752571 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella grimontii strain AGK0511, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAKWHM000000000
VERSION     NZ_JAKWHM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21467515
            Assembly: GCF_022543775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella grimontii
  ORGANISM  Klebsiella grimontii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 6752571)
  AUTHORS   Knobloch,J.
  TITLE     Hospital wastewater - a mirror of the past and a guidepost for the
            future
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6752571)
  AUTHORS   Carlsen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAR-2022) Krankenhaushygiene, Universitaetsklinikum
            Hamburg-Eppendorf, Martinistrasse 52, Hamburg 20251, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKWHM000000000.1.
            The Klebsiella grimontii whole genome shotgun (WGS) project has the
            project accession NZ_JAKWHM000000000.  This version of the project
            (01) has the accession number NZ_JAKWHM010000000, and consists of
            sequences JAKWHM010000001-JAKWHM010000291.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 75x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022543775.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:46:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,731
            CDSs (total)                      :: 6,644
            Genes (coding)                    :: 6,424
            CDSs (with protein)               :: 6,424
            Genes (RNA)                       :: 87
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 74
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 220
            CDSs (without protein)            :: 220
            Pseudo Genes (ambiguous residues) :: 1 of 220
            Pseudo Genes (frameshifted)       :: 72 of 220
            Pseudo Genes (incomplete)         :: 168 of 220
            Pseudo Genes (internal stop)      :: 25 of 220
            Pseudo Genes (multiple problems)  :: 39 of 220
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6752571
                     /organism="Klebsiella grimontii"
                     /mol_type="genomic DNA"
                     /strain="AGK0511"
                     /db_xref="taxon:2058152"
                     /collection_date="2019-11"
WGS         JAKWHM010000001-JAKWHM010000291
WGS_SCAFLD  NZ_JAKWHM010000001-NZ_JAKWHM010000291
//
LOCUS       NZ_QQGA01000000      1855104 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus influenzae strain M16180, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QQGA00000000
VERSION     NZ_QQGA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09704908
            Assembly: GCF_003490975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (bases 1 to 1855104)
  AUTHORS   Topaz,N., Boxrud,D., Retchless,A.C., Nichols,M., Chang,H.Y., Hu,F.
            and Wang,X.
  TITLE     BMScan: using whole genome similarity to rapidly and accurately
            identify bacterial meningitis causing species
  JOURNAL   BMC Infect Dis 18 (1), 405 (2018)
   PUBMED   30111301
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1855104)
  AUTHORS   Topaz,N., Retchless,A.C., Chang,H.-Y., Hu,F. and Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUL-2018) Bacterial Meningitis Lab, Centers for
            Disease Control and Prevention, 1600 Clifton Rd, Atlanta, GA 30333,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QQGA00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_QQGA00000000.  This version of the project
            (01) has the accession number NZ_QQGA01000000, and consists of
            sequences QQGA01000001-QQGA01000025.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 235.19082514888655x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003490975.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:45:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,885
            CDSs (total)                      :: 1,817
            Genes (coding)                    :: 1,759
            CDSs (with protein)               :: 1,759
            Genes (RNA)                       :: 68
            rRNAs                             :: 7, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 58
            CDSs (without protein)            :: 58
            Pseudo Genes (ambiguous residues) :: 0 of 58
            Pseudo Genes (frameshifted)       :: 26 of 58
            Pseudo Genes (incomplete)         :: 36 of 58
            Pseudo Genes (internal stop)      :: 12 of 58
            Pseudo Genes (multiple problems)  :: 15 of 58
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1855104
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /strain="M16180"
                     /host="Homo sapiens"
                     /db_xref="taxon:727"
                     /collected_by="Centers for Disease Control and Prevention"
WGS         QQGA01000001-QQGA01000025
WGS_SCAFLD  NZ_QQGA01000001-NZ_QQGA01000025
//
LOCUS       NZ_QQJT01000000      1863394 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus influenzae strain M15927, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QQJT00000000
VERSION     NZ_QQJT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09704906
            Assembly: GCF_003493745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (bases 1 to 1863394)
  AUTHORS   Topaz,N., Boxrud,D., Retchless,A.C., Nichols,M., Chang,H.Y., Hu,F.
            and Wang,X.
  TITLE     BMScan: using whole genome similarity to rapidly and accurately
            identify bacterial meningitis causing species
  JOURNAL   BMC Infect Dis 18 (1), 405 (2018)
   PUBMED   30111301
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1863394)
  AUTHORS   Topaz,N., Retchless,A.C., Chang,H.-Y., Hu,F. and Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUL-2018) Bacterial Meningitis Lab, Centers for
            Disease Control and Prevention, 1600 Clifton Rd, Atlanta, GA 30333,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QQJT00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_QQJT00000000.  This version of the project
            (01) has the accession number NZ_QQJT01000000, and consists of
            sequences QQJT01000001-QQJT01000018.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 162.35853686769875x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003493745.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:50:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,884
            CDSs (total)                      :: 1,816
            Genes (coding)                    :: 1,759
            CDSs (with protein)               :: 1,759
            Genes (RNA)                       :: 68
            rRNAs                             :: 7, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 26 of 57
            Pseudo Genes (incomplete)         :: 33 of 57
            Pseudo Genes (internal stop)      :: 14 of 57
            Pseudo Genes (multiple problems)  :: 15 of 57
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1863394
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /strain="M15927"
                     /host="Homo sapiens"
                     /db_xref="taxon:727"
                     /collected_by="Centers for Disease Control and Prevention"
WGS         QQJT01000001-QQJT01000018
WGS_SCAFLD  NZ_QQJT01000001-NZ_QQJT01000018
//
LOCUS       NZ_QQHF01000000      1841928 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus influenzae strain M14666, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QQHF00000000
VERSION     NZ_QQHF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09704901
            Assembly: GCF_003494725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (bases 1 to 1841928)
  AUTHORS   Topaz,N., Boxrud,D., Retchless,A.C., Nichols,M., Chang,H.Y., Hu,F.
            and Wang,X.
  TITLE     BMScan: using whole genome similarity to rapidly and accurately
            identify bacterial meningitis causing species
  JOURNAL   BMC Infect Dis 18 (1), 405 (2018)
   PUBMED   30111301
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1841928)
  AUTHORS   Topaz,N., Retchless,A.C., Chang,H.-Y., Hu,F. and Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUL-2018) Bacterial Meningitis Lab, Centers for
            Disease Control and Prevention, 1600 Clifton Rd, Atlanta, GA 30333,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QQHF00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_QQHF00000000.  This version of the project
            (01) has the accession number NZ_QQHF01000000, and consists of
            sequences QQHF01000001-QQHF01000018.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 199.05691368500823x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003494725.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:50:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,886
            CDSs (total)                      :: 1,810
            Genes (coding)                    :: 1,753
            CDSs (with protein)               :: 1,753
            Genes (RNA)                       :: 76
            rRNAs                             :: 7, 6, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 16S)
            partial rRNAs                     :: 5, 7 (16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 17 of 57
            Pseudo Genes (incomplete)         :: 40 of 57
            Pseudo Genes (internal stop)      :: 9 of 57
            Pseudo Genes (multiple problems)  :: 9 of 57
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1841928
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /strain="M14666"
                     /host="Homo sapiens"
                     /db_xref="taxon:727"
                     /collected_by="Centers for Disease Control and Prevention"
WGS         QQHF01000001-QQHF01000018
WGS_SCAFLD  NZ_QQHF01000001-NZ_QQHF01000018
//
LOCUS       NZ_QQFZ01000000      1844209 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus influenzae strain M03842, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QQFZ00000000
VERSION     NZ_QQFZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09704864
            Assembly: GCF_003491005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (bases 1 to 1844209)
  AUTHORS   Topaz,N., Boxrud,D., Retchless,A.C., Nichols,M., Chang,H.Y., Hu,F.
            and Wang,X.
  TITLE     BMScan: using whole genome similarity to rapidly and accurately
            identify bacterial meningitis causing species
  JOURNAL   BMC Infect Dis 18 (1), 405 (2018)
   PUBMED   30111301
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1844209)
  AUTHORS   Topaz,N., Retchless,A.C., Chang,H.-Y., Hu,F. and Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUL-2018) Bacterial Meningitis Lab, Centers for
            Disease Control and Prevention, 1600 Clifton Rd, Atlanta, GA 30333,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QQFZ00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_QQFZ00000000.  This version of the project
            (01) has the accession number NZ_QQFZ01000000, and consists of
            sequences QQFZ01000001-QQFZ01000020.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 235.23626383777545x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003491005.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:44:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,852
            CDSs (total)                      :: 1,772
            Genes (coding)                    :: 1,718
            CDSs (with protein)               :: 1,718
            Genes (RNA)                       :: 80
            rRNAs                             :: 8, 6, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 1, 6, 8 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 21 of 54
            Pseudo Genes (incomplete)         :: 39 of 54
            Pseudo Genes (internal stop)      :: 7 of 54
            Pseudo Genes (multiple problems)  :: 12 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1844209
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /strain="M03842"
                     /host="Homo sapiens"
                     /db_xref="taxon:727"
                     /collected_by="Centers for Disease Control and Prevention"
WGS         QQFZ01000001-QQFZ01000020
WGS_SCAFLD  NZ_QQFZ01000001-NZ_QQFZ01000020
//
LOCUS       NZ_JAOECB010000000   6407308 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella grimontii strain GD04070, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAOECB000000000
VERSION     NZ_JAOECB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN30525526
            Assembly: GCF_029836625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella grimontii
  ORGANISM  Klebsiella grimontii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 6407308)
  AUTHORS   Diorio-Toth,L.
  TITLE     Intensive care unit water sources are persistently colonized with
            multi-drug resistant bacteria and are the site of extensive
            horizontal gene transfer of antibiotic resistance genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6407308)
  AUTHORS   Diorio-Toth,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-SEP-2022) Computational and Systems Biology,
            Washington University in St. Louis School of Medicine, 660 S Euclid
            Ave, St. Louis, MO 63110, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAOECB000000000.1.
            The Klebsiella grimontii whole genome shotgun (WGS) project has the
            project accession NZ_JAOECB000000000.  This version of the project
            (01) has the accession number NZ_JAOECB010000000, and consists of
            sequences JAOECB010000001-JAOECB010000166.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 32.752x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029836625.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:10:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,281
            CDSs (total)                      :: 6,198
            Genes (coding)                    :: 6,035
            CDSs (with protein)               :: 6,035
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 163
            CDSs (without protein)            :: 163
            Pseudo Genes (ambiguous residues) :: 0 of 163
            Pseudo Genes (frameshifted)       :: 64 of 163
            Pseudo Genes (incomplete)         :: 107 of 163
            Pseudo Genes (internal stop)      :: 26 of 163
            Pseudo Genes (multiple problems)  :: 29 of 163
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6407308
                     /organism="Klebsiella grimontii"
                     /mol_type="genomic DNA"
                     /strain="GD04070"
                     /isolation_source="surface swab"
                     /db_xref="taxon:2058152"
                     /geo_loc_name="USA"
                     /collection_date="2018-07-09"
WGS         JAOECB010000001-JAOECB010000166
WGS_SCAFLD  NZ_JAOECB010000001-NZ_JAOECB010000166
//
LOCUS       NZ_UEUS01000000      1827512 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus influenzae isolate PTHi-12278, whole genome shotgun
            sequencing project.
ACCESSION   NZ_UEUS00000000
VERSION     NZ_UEUS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA4643480
            Assembly: GCF_900407505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1
  CONSRTM   Bioinformatics Unit on Microbial Genomics of the Portuguese NIH
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAY-2018) NATIONAL INSTITUTE OF HEALTH DR. RICARDO
            JORGE, Bioinformatics Unit, Avenida Padre Cruz, 1649-016 Lisboa,
            Portugal, Portugal
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            UEUS00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_UEUS00000000.  This version of the project
            (01) has the accession number NZ_UEUS01000000, and consists of
            sequences UEUS01000001-UEUS01000027.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900407505.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:54:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,835
            CDSs (total)                      :: 1,768
            Genes (coding)                    :: 1,710
            CDSs (with protein)               :: 1,710
            Genes (RNA)                       :: 67
            rRNAs                             :: 6, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 23S)
            partial rRNAs                     :: 3 (16S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 58
            CDSs (without protein)            :: 58
            Pseudo Genes (ambiguous residues) :: 0 of 58
            Pseudo Genes (frameshifted)       :: 29 of 58
            Pseudo Genes (incomplete)         :: 30 of 58
            Pseudo Genes (internal stop)      :: 15 of 58
            Pseudo Genes (multiple problems)  :: 15 of 58
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827512
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /serotype="NT"
                     /isolate="PTHi-12278"
                     /db_xref="taxon:727"
WGS         UEUS01000001-UEUS01000027
WGS_SCAFLD  NZ_UEUS01000001-NZ_UEUS01000027
//
LOCUS       NZ_QQBM01000000      1896381 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus influenzae strain M12066, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QQBM00000000
VERSION     NZ_QQBM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09704891
            Assembly: GCF_003497065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (bases 1 to 1896381)
  AUTHORS   Topaz,N., Boxrud,D., Retchless,A.C., Nichols,M., Chang,H.Y., Hu,F.
            and Wang,X.
  TITLE     BMScan: using whole genome similarity to rapidly and accurately
            identify bacterial meningitis causing species
  JOURNAL   BMC Infect Dis 18 (1), 405 (2018)
   PUBMED   30111301
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1896381)
  AUTHORS   Topaz,N., Retchless,A.C., Chang,H.-Y., Hu,F. and Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUL-2018) Bacterial Meningitis Lab, Centers for
            Disease Control and Prevention, 1600 Clifton Rd, Atlanta, GA 30333,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QQBM00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_QQBM00000000.  This version of the project
            (01) has the accession number NZ_QQBM01000000, and consists of
            sequences QQBM01000001-QQBM01000030.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 116.4507092x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003497065.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:55:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,935
            CDSs (total)                      :: 1,862
            Genes (coding)                    :: 1,807
            CDSs (with protein)               :: 1,807
            Genes (RNA)                       :: 73
            rRNAs                             :: 8, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 16S)
            partial rRNAs                     :: 2, 4, 5 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 55
            CDSs (without protein)            :: 55
            Pseudo Genes (ambiguous residues) :: 0 of 55
            Pseudo Genes (frameshifted)       :: 23 of 55
            Pseudo Genes (incomplete)         :: 44 of 55
            Pseudo Genes (internal stop)      :: 10 of 55
            Pseudo Genes (multiple problems)  :: 16 of 55
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1896381
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /strain="M12066"
                     /host="Homo sapiens"
                     /db_xref="taxon:727"
                     /collected_by="Centers for Disease Control and Prevention"
WGS         QQBM01000001-QQBM01000030
WGS_SCAFLD  NZ_QQBM01000001-NZ_QQBM01000030
//
LOCUS       NZ_JAOEDH010000000   6409868 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella grimontii strain GD04038, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAOEDH000000000
VERSION     NZ_JAOEDH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN30525494
            Assembly: GCF_029837225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella grimontii
  ORGANISM  Klebsiella grimontii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 6409868)
  AUTHORS   Diorio-Toth,L.
  TITLE     Intensive care unit water sources are persistently colonized with
            multi-drug resistant bacteria and are the site of extensive
            horizontal gene transfer of antibiotic resistance genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6409868)
  AUTHORS   Diorio-Toth,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-SEP-2022) Computational and Systems Biology,
            Washington University in St. Louis School of Medicine, 660 S Euclid
            Ave, St. Louis, MO 63110, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAOEDH000000000.1.
            The Klebsiella grimontii whole genome shotgun (WGS) project has the
            project accession NZ_JAOEDH000000000.  This version of the project
            (01) has the accession number NZ_JAOEDH010000000, and consists of
            sequences JAOEDH010000001-JAOEDH010000183.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 55.434x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029837225.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:11:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,288
            CDSs (total)                      :: 6,206
            Genes (coding)                    :: 6,039
            CDSs (with protein)               :: 6,039
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 71
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 167
            CDSs (without protein)            :: 167
            Pseudo Genes (ambiguous residues) :: 0 of 167
            Pseudo Genes (frameshifted)       :: 67 of 167
            Pseudo Genes (incomplete)         :: 110 of 167
            Pseudo Genes (internal stop)      :: 25 of 167
            Pseudo Genes (multiple problems)  :: 30 of 167
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6409868
                     /organism="Klebsiella grimontii"
                     /mol_type="genomic DNA"
                     /strain="GD04038"
                     /isolation_source="surface swab"
                     /db_xref="taxon:2058152"
                     /geo_loc_name="USA"
                     /collection_date="2018-06-04"
WGS         JAOEDH010000001-JAOEDH010000183
WGS_SCAFLD  NZ_JAOEDH010000001-NZ_JAOEDH010000183
//
LOCUS       NZ_FNWS01000000      1413439 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Fructobacillus pseudoficulneus strain DSM 15468, whole genome
            shotgun sequencing project.
ACCESSION   NZ_FNWS00000000
VERSION     NZ_FNWS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05660469
            Assembly: GCF_900108455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Fructobacillus pseudoficulneus
  ORGANISM  Fructobacillus pseudoficulneus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Fructobacillus.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNWS00000000.1.
            The Fructobacillus pseudoficulneus whole genome shotgun (WGS)
            project has the project accession NZ_FNWS00000000.  This version of
            the project (01) has the accession number NZ_FNWS01000000, and
            consists of sequences FNWS01000001-FNWS01000018.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900108455.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:02:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,388
            CDSs (total)                      :: 1,326
            Genes (coding)                    :: 1,315
            CDSs (with protein)               :: 1,315
            Genes (RNA)                       :: 62
            rRNAs                             :: 3, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 4 (16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 5 of 11
            Pseudo Genes (incomplete)         :: 5 of 11
            Pseudo Genes (internal stop)      :: 1 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1413439
                     /organism="Fructobacillus pseudoficulneus"
                     /mol_type="genomic DNA"
                     /strain="DSM 15468"
                     /type_material="type strain of Leuconostoc
                     pseudoficulneum"
                     /db_xref="taxon:220714"
                     /lat_lon="40.31 N 7.8 W"
WGS         FNWS01000001-FNWS01000018
WGS_SCAFLD  NZ_FNWS01000001-NZ_FNWS01000018
//
LOCUS       NZ_QQHS01000000      1841613 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Haemophilus influenzae strain M05825, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QQHS00000000
VERSION     NZ_QQHS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09704866
            Assembly: GCF_003494585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (bases 1 to 1841613)
  AUTHORS   Topaz,N., Boxrud,D., Retchless,A.C., Nichols,M., Chang,H.Y., Hu,F.
            and Wang,X.
  TITLE     BMScan: using whole genome similarity to rapidly and accurately
            identify bacterial meningitis causing species
  JOURNAL   BMC Infect Dis 18 (1), 405 (2018)
   PUBMED   30111301
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1841613)
  AUTHORS   Topaz,N., Retchless,A.C., Chang,H.-Y., Hu,F. and Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUL-2018) Bacterial Meningitis Lab, Centers for
            Disease Control and Prevention, 1600 Clifton Rd, Atlanta, GA 30333,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QQHS00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_QQHS00000000.  This version of the project
            (01) has the accession number NZ_QQHS01000000, and consists of
            sequences QQHS01000001-QQHS01000021.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 187.68766491711347x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003494585.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:56:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,835
            CDSs (total)                      :: 1,767
            Genes (coding)                    :: 1,714
            CDSs (with protein)               :: 1,714
            Genes (RNA)                       :: 68
            rRNAs                             :: 8, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 27 of 53
            Pseudo Genes (incomplete)         :: 28 of 53
            Pseudo Genes (internal stop)      :: 12 of 53
            Pseudo Genes (multiple problems)  :: 13 of 53
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1841613
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /strain="M05825"
                     /host="Homo sapiens"
                     /db_xref="taxon:727"
                     /collected_by="Centers for Disease Control and Prevention"
WGS         QQHS01000001-QQHS01000021
WGS_SCAFLD  NZ_QQHS01000001-NZ_QQHS01000021
//
LOCUS       NZ_SFZP01000000      1660903 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Helicobacter pylori strain C-Mx-2010-2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SFZP00000000
VERSION     NZ_SFZP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10881967
            Assembly: GCF_011140515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori
  ORGANISM  Helicobacter pylori
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1660903)
  AUTHORS   Torres,R.C., Weis,A., Huang,C., Kong,N., Weimer,B.C. and Torres,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-FEB-2019) Unidad de Investigacion Medica en
            Enfermedades Infecciosas y Parasitarias, CMN Siglo XXI, Instituto
            Mexicano del Seguro Social, Av. Cuauhtemoc 330, Mexico City 06720,
            Mexico
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SFZP00000000.1.
            The Helicobacter pylori whole genome shotgun (WGS) project has the
            project accession NZ_SFZP00000000.  This version of the project
            (01) has the accession number NZ_SFZP01000000, and consists of
            sequences SFZP01000001-SFZP01000030.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 29-DEC-2016
            Assembly Method        :: ABySS v. Dec-2016
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 680x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_011140515.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:35:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,606
            CDSs (total)                      :: 1,558
            Genes (coding)                    :: 1,482
            CDSs (with protein)               :: 1,482
            Genes (RNA)                       :: 48
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 39 of 76
            Pseudo Genes (incomplete)         :: 38 of 76
            Pseudo Genes (internal stop)      :: 10 of 76
            Pseudo Genes (multiple problems)  :: 10 of 76
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660903
                     /organism="Helicobacter pylori"
                     /mol_type="genomic DNA"
                     /strain="C-Mx-2010-2"
                     /host="Homo sapiens"
                     /db_xref="taxon:210"
                     /geo_loc_name="Mexico"
                     /collection_date="2010-04-30"
                     /collected_by="Irma Ramos"
WGS         SFZP01000001-SFZP01000030
WGS_SCAFLD  NZ_SFZP01000001-NZ_SFZP01000030
//
LOCUS       NZ_JBBYWT010000000   6179670 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella michiganensis strain ESBL56, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBYWT000000000
VERSION     NZ_JBBYWT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40922767
            Assembly: GCF_038378065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 6179670)
  AUTHORS   Tokajian,S., Tannous,J. and Al Khoury,C.
  TITLE     Monitoring Antimicrobial Resistance in Bovine Feces from Farms
            across Lebanon: Sequencing and Genomic Surveillance under One
            Health
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6179670)
  AUTHORS   Tokajian,S., Tannous,J. and Al Khoury,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-APR-2024) Department of Natural Sciences, Lebanese
            American University- Microbial Pathogenomics Lab, Blat, Byblos 36,
            Lebanon
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBYWT000000000.1.
            The Klebsiella michiganensis whole genome shotgun (WGS) project has
            the project accession NZ_JBBYWT000000000.  This version of the
            project (01) has the accession number NZ_JBBYWT010000000, and
            consists of sequences JBBYWT010000001-JBBYWT010000060.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038378065.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:41:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,996
            CDSs (total)                      :: 5,865
            Genes (coding)                    :: 5,748
            CDSs (with protein)               :: 5,748
            Genes (RNA)                       :: 131
            rRNAs                             :: 13, 6, 17 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 16S)
            partial rRNAs                     :: 6, 5, 17 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 54 of 117
            Pseudo Genes (incomplete)         :: 80 of 117
            Pseudo Genes (internal stop)      :: 15 of 117
            Pseudo Genes (multiple problems)  :: 27 of 117
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6179670
                     /organism="Klebsiella michiganensis"
                     /mol_type="genomic DNA"
                     /strain="ESBL56"
                     /host="Bos taurus"
                     /db_xref="taxon:1134687"
                     /geo_loc_name="Lebanon: Byblos"
                     /collection_date="2023-09"
WGS         JBBYWT010000001-JBBYWT010000060
WGS_SCAFLD  NZ_JBBYWT010000001-NZ_JBBYWT010000060
//
LOCUS       NZ_SHOV01000000      1636955 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Helicobacter pylori strain Nic48-A, whole genome shotgun sequencing
            project.
ACCESSION   NZ_SHOV00000000
VERSION     NZ_SHOV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10919729
            Assembly: GCF_011175075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori
  ORGANISM  Helicobacter pylori
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1636955)
  AUTHORS   Thorell,K., Lundin,S.B., Graham,D.Y., Paszat,L. and Palacios,R.V.
  TITLE     Characterization of Helicobacter pylori from Nicaragua
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1636955)
  AUTHORS   Thorell,K., Lundin,S.B., Graham,D.Y., Paszat,L. and Palacios,R.V.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-FEB-2019) Microbiology and Immunology, University of
            Gothenburg, Medicinaregatan 1D, Gothenburg 41390, Sweden
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SHOV00000000.1.
            The Helicobacter pylori whole genome shotgun (WGS) project has the
            project accession NZ_SHOV00000000.  This version of the project
            (01) has the accession number NZ_SHOV01000000, and consists of
            sequences SHOV01000001-SHOV01000018.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 05-JUL-2016
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 212x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_011175075.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:34:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,571
            CDSs (total)                      :: 1,529
            Genes (coding)                    :: 1,453
            CDSs (with protein)               :: 1,453
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 56 of 76
            Pseudo Genes (incomplete)         :: 22 of 76
            Pseudo Genes (internal stop)      :: 9 of 76
            Pseudo Genes (multiple problems)  :: 11 of 76
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1636955
                     /organism="Helicobacter pylori"
                     /mol_type="genomic DNA"
                     /strain="Nic48-A"
                     /isolation_source="antrum, stomach"
                     /host="Homo sapiens"
                     /db_xref="taxon:210"
                     /geo_loc_name="Nicaragua: Managua"
                     /lat_lon="12.149368 N 86.311024 W"
                     /collection_date="2010-07-23"
                     /collected_by="Paszat, Graham and Lundin"
WGS         SHOV01000001-SHOV01000018
WGS_SCAFLD  NZ_SHOV01000001-NZ_SHOV01000018
//
LOCUS       NZ_JAFCRS010000000   1790138 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Francisella tularensis subsp. holarctica strain Tul-153_KZ, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JAFCRS000000000
VERSION     NZ_JAFCRS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17766963
            Assembly: GCF_017089475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Francisella tularensis subsp. holarctica
  ORGANISM  Francisella tularensis subsp. holarctica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Thiotrichales; Francisellaceae; Francisella.
REFERENCE   1  (bases 1 to 1790138)
  AUTHORS   Shevtsov,V., Kairzhanova,A., Shevtsov,A., Shustov,A., Kalendar,R.,
            Abdrakhmanov,S., Lukhnova,L., Izbanova,U., Ramanculov,E. and
            Vergnaud,G.
  TITLE     Genetic diversity of Francisella tularensis subsp. holarcticain
            Kazakhstan
  JOURNAL   PLoS Negl Trop Dis (2021) In press
REFERENCE   2  (bases 1 to 1790138)
  AUTHORS   Shevtsov,A., Vergnaud,G., Shevtsov,V., Amirgazin,A. and
            Kairzhanova,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-FEB-2021) Laboratory of Applide Genetics, National
            Center for Biotechnology, Kurgalzhynskoye Road, 13/5, Nur-Sultan,
            Akmola Region 010000, Kazakhstan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAFCRS000000000.1.
            The Francisella tularensis subsp. holarctica whole genome shotgun
            (WGS) project has the project accession NZ_JAFCRS000000000.  This
            version of the project (01) has the accession number
            NZ_JAFCRS010000000, and consists of sequences
            JAFCRS010000001-JAFCRS010000101.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: SEP-2020
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 96x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017089475.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:01:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,921
            CDSs (total)                      :: 1,877
            Genes (coding)                    :: 1,564
            CDSs (with protein)               :: 1,564
            Genes (RNA)                       :: 44
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 313
            CDSs (without protein)            :: 313
            Pseudo Genes (ambiguous residues) :: 0 of 313
            Pseudo Genes (frameshifted)       :: 143 of 313
            Pseudo Genes (incomplete)         :: 142 of 313
            Pseudo Genes (internal stop)      :: 94 of 313
            Pseudo Genes (multiple problems)  :: 59 of 313
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1790138
                     /organism="Francisella tularensis subsp. holarctica"
                     /mol_type="genomic DNA"
                     /strain="Tul-153_KZ"
                     /isolation_source="tissue"
                     /host="Oenanthe isabellina"
                     /sub_species="holarctica"
                     /db_xref="taxon:119857"
                     /geo_loc_name="Kazakhstan: West-Kazakhstan"
                     /lat_lon="49.05 N 50.10 E"
                     /collection_date="2011-05-24"
                     /collected_by="M. Aikimbayevs National Scientific Center
                     for Especially Dangerous Infections (NSCEDI)"
                     /biovar="II"
WGS         JAFCRS010000001-JAFCRS010000101
WGS_SCAFLD  NZ_JAFCRS010000001-NZ_JAFCRS010000101
//
LOCUS       NZ_JARUSB010000000   2186084 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Glaesserella parasuis strain GPS5 HEBXT 2017-3, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JARUSB000000000
VERSION     NZ_JARUSB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34064523
            Assembly: GCF_029762675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2186084)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Whole-genome sequence analyses of Chinese Glaesserella parasuis
            isolates reveal extensive genomic variation, virulence genes and
            antibiotic resistance genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2186084)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-APR-2023) College of Veterinary Medicine, Huazhong
            Agricultural University, No. 1 Shizishan Street, Hongshan District,
            Wuhan, Hubei 430000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARUSB000000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_JARUSB000000000.  This version of the
            project (01) has the accession number NZ_JARUSB010000000, and
            consists of sequences JARUSB010000001-JARUSB010000134.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029762675.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:44:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,173
            CDSs (total)                      :: 2,127
            Genes (coding)                    :: 2,022
            CDSs (with protein)               :: 2,022
            Genes (RNA)                       :: 46
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 38
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 35 of 105
            Pseudo Genes (incomplete)         :: 66 of 105
            Pseudo Genes (internal stop)      :: 14 of 105
            Pseudo Genes (multiple problems)  :: 8 of 105
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2186084
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="GPS5 HEBXT 2017-3"
                     /serotype="1"
                     /isolation_source="lung"
                     /host="pig"
                     /db_xref="taxon:738"
                     /geo_loc_name="China:Hebei, Xingtai"
                     /collection_date="2017-03"
WGS         JARUSB010000001-JARUSB010000134
WGS_SCAFLD  NZ_JARUSB010000001-NZ_JARUSB010000134
//
LOCUS       NZ_JAZHLL010000000   6338054 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella michiganensis strain HO, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAZHLL000000000
VERSION     NZ_JAZHLL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39523009
            Assembly: GCF_049068035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 6338054)
  AUTHORS   Mammeri,H.
  TITLE     Genomic comparison of two Klebsiella michiganensis isolates and
            identification of L169M substitution in overproduced OXY
            beta-lactamase
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6338054)
  AUTHORS   Mammeri,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-FEB-2024) Laboratory of Bacteriology, Cochin
            Hospital, 27 rue du Foubourg Saint Jacques, Paris 75014, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAZHLL000000000.1.
            The Klebsiella michiganensis whole genome shotgun (WGS) project has
            the project accession NZ_JAZHLL000000000.  This version of the
            project (01) has the accession number NZ_JAZHLL010000000, and
            consists of sequences JAZHLL010000001-JAZHLL010000117.
            Bacteria and source DNA available from Laboratory of Bacteriology -
            Cochin Hospital (France).
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-JUL-2024
            Assembly Method        :: SPAdes v. 2024-07-01
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 203.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049068035.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:01:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,192
            CDSs (total)                      :: 6,093
            Genes (coding)                    :: 5,968
            CDSs (with protein)               :: 5,968
            Genes (RNA)                       :: 99
            rRNAs                             :: 7, 5, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 3, 5, 7 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 125
            CDSs (without protein)            :: 125
            Pseudo Genes (ambiguous residues) :: 0 of 125
            Pseudo Genes (frameshifted)       :: 39 of 125
            Pseudo Genes (incomplete)         :: 99 of 125
            Pseudo Genes (internal stop)      :: 9 of 125
            Pseudo Genes (multiple problems)  :: 20 of 125
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6338054
                     /organism="Klebsiella michiganensis"
                     /mol_type="genomic DNA"
                     /strain="HO"
                     /isolation_source="ascitic fluid; L169M substitution in
                     OXY-overproducing isolate led to a tradeoff between
                     cefepime resistance, collateral piperacillin-tazobactam
                     susceptibility, and decreased fitness"
                     /host="Homo sapiens"
                     /db_xref="taxon:1134687"
                     /geo_loc_name="France: Paris"
                     /lat_lon="48.51 N 2.21 E"
                     /collection_date="2023-05-05"
                     /collected_by="Dr Hedi MAMMERI"
WGS         JAZHLL010000001-JAZHLL010000117
WGS_SCAFLD  NZ_JAZHLL010000001-NZ_JAZHLL010000117
//
LOCUS       NZ_JARUTO010000000   2384062 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Glaesserella parasuis strain GPS80 HBWH 2020-12, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JARUTO000000000
VERSION     NZ_JARUTO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34077568
            Assembly: GCF_029764335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2384062)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Whole-genome sequence analyses of Chinese Glaesserella parasuis
            isolates reveal extensive genomic variation, virulence genes and
            antibiotic resistance genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2384062)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-APR-2023) College of Veterinary Medicine, Huazhong
            Agricultural University, No. 1 Shizishan Street, Hongshan District,
            Wuhan, Hubei 430000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARUTO000000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_JARUTO000000000.  This version of the
            project (01) has the accession number NZ_JARUTO010000000, and
            consists of sequences JARUTO010000001-JARUTO010000127.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029764335.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:46:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,324
            CDSs (total)                      :: 2,273
            Genes (coding)                    :: 2,195
            CDSs (with protein)               :: 2,195
            Genes (RNA)                       :: 51
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 26 of 78
            Pseudo Genes (incomplete)         :: 52 of 78
            Pseudo Genes (internal stop)      :: 16 of 78
            Pseudo Genes (multiple problems)  :: 14 of 78
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2384062
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="GPS80 HBWH 2020-12"
                     /serotype="9"
                     /isolation_source="lung"
                     /host="pig"
                     /db_xref="taxon:738"
                     /geo_loc_name="China:Hubei, Wuhan"
                     /collection_date="2020-12"
WGS         JARUTO010000001-JARUTO010000127
WGS_SCAFLD  NZ_JARUTO010000001-NZ_JARUTO010000127
//
LOCUS       NZ_JBMOXZ010000000   6209185 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella michiganensis strain 15297_C, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBMOXZ000000000
VERSION     NZ_JBMOXZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47597813
            Assembly: GCF_049320105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 6209185)
  AUTHORS   Sedlakova,M.H., Fiserova,K. and Mlynarcik,P.
  TITLE     Resistance to colistin in a tertiary hospital, Czech Republic
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6209185)
  AUTHORS   Mlynarcik,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2025) Department of Microbiology, Palacky
            University Olomouc, Hnevotinska 3, Olomouc 775 15, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBMOXZ000000000.1.
            The Klebsiella michiganensis whole genome shotgun (WGS) project has
            the project accession NZ_JBMOXZ000000000.  This version of the
            project (01) has the accession number NZ_JBMOXZ010000000, and
            consists of sequences JBMOXZ010000001-JBMOXZ010000094.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049320105.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:12:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,945
            CDSs (total)                      :: 5,843
            Genes (coding)                    :: 5,716
            CDSs (with protein)               :: 5,716
            Genes (RNA)                       :: 102
            rRNAs                             :: 6, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 127
            CDSs (without protein)            :: 127
            Pseudo Genes (ambiguous residues) :: 0 of 127
            Pseudo Genes (frameshifted)       :: 48 of 127
            Pseudo Genes (incomplete)         :: 80 of 127
            Pseudo Genes (internal stop)      :: 20 of 127
            Pseudo Genes (multiple problems)  :: 16 of 127
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6209185
                     /organism="Klebsiella michiganensis"
                     /mol_type="genomic DNA"
                     /strain="15297_C"
                     /isolation_source="Clinical sample from a hospital
                     setting"
                     /host="Homo sapiens"
                     /db_xref="taxon:1134687"
                     /geo_loc_name="Czech Republic: Olomouc (Institute of
                     Microbiology, Faculty of Medicine, UPOL)"
                     /collection_date="2018-01-01/2024-12-31"
WGS         JBMOXZ010000001-JBMOXZ010000094
WGS_SCAFLD  NZ_JBMOXZ010000001-NZ_JBMOXZ010000094
//
LOCUS       NZ_JARUTW010000000   2187588 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Glaesserella parasuis strain GPS88 HNPDS 2021-2, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JARUTW000000000
VERSION     NZ_JARUTW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34078042
            Assembly: GCF_029764475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2187588)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Whole-genome sequence analyses of Chinese Glaesserella parasuis
            isolates reveal extensive genomic variation, virulence genes and
            antibiotic resistance genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2187588)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-APR-2023) College of Veterinary Medicine, Huazhong
            Agricultural University, No. 1 Shizishan Street, Hongshan District,
            Wuhan, Hubei 430000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARUTW000000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_JARUTW000000000.  This version of the
            project (01) has the accession number NZ_JARUTW010000000, and
            consists of sequences JARUTW010000001-JARUTW010000113.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029764475.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:50:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,112
            Genes (coding)                    :: 2,017
            CDSs (with protein)               :: 2,017
            Genes (RNA)                       :: 46
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 37
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 95
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 29 of 95
            Pseudo Genes (incomplete)         :: 63 of 95
            Pseudo Genes (internal stop)      :: 13 of 95
            Pseudo Genes (multiple problems)  :: 8 of 95
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2187588
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="GPS88 HNPDS 2021-2"
                     /serotype="1"
                     /isolation_source="lung"
                     /host="pig"
                     /db_xref="taxon:738"
                     /geo_loc_name="China:Henan, Pingdingshan"
                     /collection_date="2021-02"
WGS         JARUTW010000001-JARUTW010000113
WGS_SCAFLD  NZ_JARUTW010000001-NZ_JARUTW010000113
//
LOCUS       NZ_JARUTP010000000   2402392 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Glaesserella parasuis strain GPS81 HBQJ 2020-12, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JARUTP000000000
VERSION     NZ_JARUTP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34077719
            Assembly: GCF_029764395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2402392)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Whole-genome sequence analyses of Chinese Glaesserella parasuis
            isolates reveal extensive genomic variation, virulence genes and
            antibiotic resistance genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2402392)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-APR-2023) College of Veterinary Medicine, Huazhong
            Agricultural University, No. 1 Shizishan Street, Hongshan District,
            Wuhan, Hubei 430000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARUTP000000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_JARUTP000000000.  This version of the
            project (01) has the accession number NZ_JARUTP010000000, and
            consists of sequences JARUTP010000001-JARUTP010000125.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029764395.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:52:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,387
            CDSs (total)                      :: 2,336
            Genes (coding)                    :: 2,243
            CDSs (with protein)               :: 2,243
            Genes (RNA)                       :: 51
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 93
            CDSs (without protein)            :: 93
            Pseudo Genes (ambiguous residues) :: 0 of 93
            Pseudo Genes (frameshifted)       :: 32 of 93
            Pseudo Genes (incomplete)         :: 63 of 93
            Pseudo Genes (internal stop)      :: 15 of 93
            Pseudo Genes (multiple problems)  :: 14 of 93
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2402392
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="GPS81 HBQJ 2020-12"
                     /serotype="8"
                     /isolation_source="lung"
                     /host="pig"
                     /db_xref="taxon:738"
                     /geo_loc_name="China:Hubei, Qianjiang"
                     /collection_date="2020-12"
WGS         JARUTP010000001-JARUTP010000125
WGS_SCAFLD  NZ_JARUTP010000001-NZ_JARUTP010000125
//
LOCUS       NZ_JARUVE010000000   2181932 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Glaesserella parasuis strain GPS123 HBWH 2022-1, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JARUVE000000000
VERSION     NZ_JARUVE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34083332
            Assembly: GCF_029767605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2181932)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Whole-genome sequence analyses of Chinese Glaesserella parasuis
            isolates reveal extensive genomic variation, virulence genes and
            antibiotic resistance genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2181932)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-APR-2023) College of Veterinary Medicine, Huazhong
            Agricultural University, No. 1 Shizishan Street, Hongshan District,
            Wuhan, Hubei 430000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARUVE000000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_JARUVE000000000.  This version of the
            project (01) has the accession number NZ_JARUVE010000000, and
            consists of sequences JARUVE010000001-JARUVE010000138.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. v3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029767605.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:50:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,134
            Genes (coding)                    :: 2,020
            CDSs (with protein)               :: 2,020
            Genes (RNA)                       :: 52
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 114
            CDSs (without protein)            :: 114
            Pseudo Genes (ambiguous residues) :: 0 of 114
            Pseudo Genes (frameshifted)       :: 32 of 114
            Pseudo Genes (incomplete)         :: 78 of 114
            Pseudo Genes (internal stop)      :: 15 of 114
            Pseudo Genes (multiple problems)  :: 9 of 114
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2181932
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="GPS123 HBWH 2022-1"
                     /serotype="1"
                     /isolation_source="nasal cavity"
                     /host="pig"
                     /db_xref="taxon:738"
                     /geo_loc_name="China:Hubei, Wuhan"
                     /collection_date="2022-01"
WGS         JARUVE010000001-JARUVE010000138
WGS_SCAFLD  NZ_JARUVE010000001-NZ_JARUVE010000138
//
LOCUS       NZ_JARURQ010000000   2208609 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Glaesserella parasuis strain GPS15 HBWH 2017-9, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JARURQ000000000
VERSION     NZ_JARURQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34065412
            Assembly: GCF_029762915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2208609)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Whole-genome sequence analyses of Chinese Glaesserella parasuis
            isolates reveal extensive genomic variation, virulence genes and
            antibiotic resistance genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2208609)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-APR-2023) College of Veterinary Medicine, Huazhong
            Agricultural University, No. 1 Shizishan Street, Hongshan District,
            Wuhan, Hubei 430000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARURQ000000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_JARURQ000000000.  This version of the
            project (01) has the accession number NZ_JARURQ010000000, and
            consists of sequences JARURQ010000001-JARURQ010000120.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029762915.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:49:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,181
            CDSs (total)                      :: 2,133
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 48
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 102
            CDSs (without protein)            :: 102
            Pseudo Genes (ambiguous residues) :: 0 of 102
            Pseudo Genes (frameshifted)       :: 27 of 102
            Pseudo Genes (incomplete)         :: 71 of 102
            Pseudo Genes (internal stop)      :: 17 of 102
            Pseudo Genes (multiple problems)  :: 10 of 102
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2208609
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="GPS15 HBWH 2017-9"
                     /serotype="13"
                     /isolation_source="nasal cavity"
                     /host="pig"
                     /db_xref="taxon:738"
                     /geo_loc_name="China:Hubei, Wuhan"
                     /collection_date="2017-09"
WGS         JARURQ010000001-JARURQ010000120
WGS_SCAFLD  NZ_JARURQ010000001-NZ_JARURQ010000120
//
LOCUS       NZ_JARUSO010000000   2148444 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Glaesserella parasuis strain GPS51 HBXN 2019-7, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JARUSO000000000
VERSION     NZ_JARUSO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34073894
            Assembly: GCF_029763575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2148444)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Whole-genome sequence analyses of Chinese Glaesserella parasuis
            isolates reveal extensive genomic variation, virulence genes and
            antibiotic resistance genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2148444)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-APR-2023) College of Veterinary Medicine, Huazhong
            Agricultural University, No. 1 Shizishan Street, Hongshan District,
            Wuhan, Hubei 430000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARUSO000000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_JARUSO000000000.  This version of the
            project (01) has the accession number NZ_JARUSO010000000, and
            consists of sequences JARUSO010000001-JARUSO010000166.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029763575.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:51:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,164
            CDSs (total)                      :: 2,118
            Genes (coding)                    :: 2,001
            CDSs (with protein)               :: 2,001
            Genes (RNA)                       :: 46
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 38
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 31 of 117
            Pseudo Genes (incomplete)         :: 85 of 117
            Pseudo Genes (internal stop)      :: 14 of 117
            Pseudo Genes (multiple problems)  :: 10 of 117
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148444
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="GPS51 HBXN 2019-7"
                     /serotype="1"
                     /isolation_source="lung"
                     /host="pig"
                     /db_xref="taxon:738"
                     /geo_loc_name="China:Hubei, Xianning"
                     /collection_date="2019-07"
WGS         JARUSO010000001-JARUSO010000166
WGS_SCAFLD  NZ_JARUSO010000001-NZ_JARUSO010000166
//
LOCUS       NZ_JARUSC010000000   2435691 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Glaesserella parasuis strain GPS4 HBXC 2017-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JARUSC000000000
VERSION     NZ_JARUSC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34064521
            Assembly: GCF_029762655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2435691)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Whole-genome sequence analyses of Chinese Glaesserella parasuis
            isolates reveal extensive genomic variation, virulence genes and
            antibiotic resistance genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2435691)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-APR-2023) College of Veterinary Medicine, Huazhong
            Agricultural University, No. 1 Shizishan Street, Hongshan District,
            Wuhan, Hubei 430000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARUSC000000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_JARUSC000000000.  This version of the
            project (01) has the accession number NZ_JARUSC010000000, and
            consists of sequences JARUSC010000001-JARUSC010000148.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029762655.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:50:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,443
            CDSs (total)                      :: 2,395
            Genes (coding)                    :: 2,307
            CDSs (with protein)               :: 2,307
            Genes (RNA)                       :: 48
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 88
            CDSs (without protein)            :: 88
            Pseudo Genes (ambiguous residues) :: 0 of 88
            Pseudo Genes (frameshifted)       :: 30 of 88
            Pseudo Genes (incomplete)         :: 58 of 88
            Pseudo Genes (internal stop)      :: 16 of 88
            Pseudo Genes (multiple problems)  :: 15 of 88
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435691
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="GPS4 HBXC 2017-1"
                     /serotype="4"
                     /isolation_source="lung"
                     /host="pig"
                     /db_xref="taxon:738"
                     /geo_loc_name="China:Hubei, Xiaochang"
                     /collection_date="2017-01"
WGS         JARUSC010000001-JARUSC010000148
WGS_SCAFLD  NZ_JARUSC010000001-NZ_JARUSC010000148
//
LOCUS       NZ_JARUVJ010000000   2182363 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Glaesserella parasuis strain GPS129 HBWH 2022-3, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JARUVJ000000000
VERSION     NZ_JARUVJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34083536
            Assembly: GCF_029766955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2182363)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Whole-genome sequence analyses of Chinese Glaesserella parasuis
            isolates reveal extensive genomic variation, virulence genes and
            antibiotic resistance genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2182363)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-APR-2023) College of Veterinary Medicine, Huazhong
            Agricultural University, No. 1 Shizishan Street, Hongshan District,
            Wuhan, Hubei 430000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARUVJ000000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_JARUVJ000000000.  This version of the
            project (01) has the accession number NZ_JARUVJ010000000, and
            consists of sequences JARUVJ010000001-JARUVJ010000135.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029766955.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:49:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,187
            CDSs (total)                      :: 2,137
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 50
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 106
            CDSs (without protein)            :: 106
            Pseudo Genes (ambiguous residues) :: 0 of 106
            Pseudo Genes (frameshifted)       :: 31 of 106
            Pseudo Genes (incomplete)         :: 71 of 106
            Pseudo Genes (internal stop)      :: 15 of 106
            Pseudo Genes (multiple problems)  :: 9 of 106
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2182363
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="GPS129 HBWH 2022-3"
                     /serotype="1"
                     /isolation_source="brain"
                     /host="pig"
                     /db_xref="taxon:738"
                     /geo_loc_name="China:Hubei, Wuhan"
                     /collection_date="2022-03"
WGS         JARUVJ010000001-JARUVJ010000135
WGS_SCAFLD  NZ_JARUVJ010000001-NZ_JARUVJ010000135
//
LOCUS       NZ_JARUVK010000000   2166154 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Glaesserella parasuis strain GPS130 HBWH 2022-4, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JARUVK000000000
VERSION     NZ_JARUVK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34083537
            Assembly: GCF_029767695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2166154)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Whole-genome sequence analyses of Chinese Glaesserella parasuis
            isolates reveal extensive genomic variation, virulence genes and
            antibiotic resistance genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2166154)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-APR-2023) College of Veterinary Medicine, Huazhong
            Agricultural University, No. 1 Shizishan Street, Hongshan District,
            Wuhan, Hubei 430000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARUVK000000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_JARUVK000000000.  This version of the
            project (01) has the accession number NZ_JARUVK010000000, and
            consists of sequences JARUVK010000001-JARUVK010000143.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029767695.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:52:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,153
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 1,993
            CDSs (with protein)               :: 1,993
            Genes (RNA)                       :: 48
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 27 of 112
            Pseudo Genes (incomplete)         :: 81 of 112
            Pseudo Genes (internal stop)      :: 16 of 112
            Pseudo Genes (multiple problems)  :: 9 of 112
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2166154
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="GPS130 HBWH 2022-4"
                     /serotype="13"
                     /isolation_source="trachea"
                     /host="pig"
                     /db_xref="taxon:738"
                     /geo_loc_name="China:Hubei, Wuhan"
                     /collection_date="2022-04"
WGS         JARUVK010000001-JARUVK010000143
WGS_SCAFLD  NZ_JARUVK010000001-NZ_JARUVK010000143
//
LOCUS       NZ_JARUTX010000000   2170391 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Glaesserella parasuis strain GPS89 HNPDS 2021-2, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JARUTX000000000
VERSION     NZ_JARUTX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34078044
            Assembly: GCF_029764515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2170391)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Whole-genome sequence analyses of Chinese Glaesserella parasuis
            isolates reveal extensive genomic variation, virulence genes and
            antibiotic resistance genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2170391)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-APR-2023) College of Veterinary Medicine, Huazhong
            Agricultural University, No. 1 Shizishan Street, Hongshan District,
            Wuhan, Hubei 430000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARUTX000000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_JARUTX000000000.  This version of the
            project (01) has the accession number NZ_JARUTX010000000, and
            consists of sequences JARUTX010000001-JARUTX010000123.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029764515.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:51:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,154
            CDSs (total)                      :: 2,104
            Genes (coding)                    :: 2,011
            CDSs (with protein)               :: 2,011
            Genes (RNA)                       :: 50
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 93
            CDSs (without protein)            :: 93
            Pseudo Genes (ambiguous residues) :: 0 of 93
            Pseudo Genes (frameshifted)       :: 26 of 93
            Pseudo Genes (incomplete)         :: 63 of 93
            Pseudo Genes (internal stop)      :: 16 of 93
            Pseudo Genes (multiple problems)  :: 10 of 93
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170391
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="GPS89 HNPDS 2021-2"
                     /serotype="Nontypeable"
                     /isolation_source="lung"
                     /host="pig"
                     /db_xref="taxon:738"
                     /geo_loc_name="China:Henan, Pingdingshan"
                     /collection_date="2021-02"
WGS         JARUTX010000001-JARUTX010000123
WGS_SCAFLD  NZ_JARUTX010000001-NZ_JARUTX010000123
//
LOCUS       NZ_JARUSV010000000   2186487 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Glaesserella parasuis strain GPS59 HBWH 2019-12, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JARUSV000000000
VERSION     NZ_JARUSV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34073935
            Assembly: GCF_029763735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2186487)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Whole-genome sequence analyses of Chinese Glaesserella parasuis
            isolates reveal extensive genomic variation, virulence genes and
            antibiotic resistance genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2186487)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-APR-2023) College of Veterinary Medicine, Huazhong
            Agricultural University, No. 1 Shizishan Street, Hongshan District,
            Wuhan, Hubei 430000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARUSV000000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_JARUSV000000000.  This version of the
            project (01) has the accession number NZ_JARUSV010000000, and
            consists of sequences JARUSV010000001-JARUSV010000134.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029763735.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:49:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,171
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,020
            CDSs (with protein)               :: 2,020
            Genes (RNA)                       :: 46
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 38
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 37 of 105
            Pseudo Genes (incomplete)         :: 66 of 105
            Pseudo Genes (internal stop)      :: 15 of 105
            Pseudo Genes (multiple problems)  :: 11 of 105
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2186487
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="GPS59 HBWH 2019-12"
                     /serotype="1"
                     /isolation_source="trachea"
                     /host="pig"
                     /db_xref="taxon:738"
                     /geo_loc_name="China:Hubei, Wuhan"
                     /collection_date="2019-12"
WGS         JARUSV010000001-JARUSV010000134
WGS_SCAFLD  NZ_JARUSV010000001-NZ_JARUSV010000134
//
LOCUS       NZ_JARURK010000000   2167822 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Glaesserella parasuis strain GPS22 JXTH 2017-12, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JARURK000000000
VERSION     NZ_JARURK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34065792
            Assembly: GCF_029763015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2167822)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Whole-genome sequence analyses of Chinese Glaesserella parasuis
            isolates reveal extensive genomic variation, virulence genes and
            antibiotic resistance genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2167822)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-APR-2023) College of Veterinary Medicine, Huazhong
            Agricultural University, No. 1 Shizishan Street, Hongshan District,
            Wuhan, Hubei 430000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARURK000000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_JARURK000000000.  This version of the
            project (01) has the accession number NZ_JARURK010000000, and
            consists of sequences JARURK010000001-JARURK010000161.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029763015.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:53:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,135
            Genes (coding)                    :: 2,020
            CDSs (with protein)               :: 2,020
            Genes (RNA)                       :: 51
            rRNAs                             :: 3, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 4 (23S)
            tRNAs                             :: 39
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 30 of 115
            Pseudo Genes (incomplete)         :: 80 of 115
            Pseudo Genes (internal stop)      :: 13 of 115
            Pseudo Genes (multiple problems)  :: 6 of 115
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2167822
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="GPS22 JXTH 2017-12"
                     /serotype="1"
                     /isolation_source="lung"
                     /host="pig"
                     /db_xref="taxon:738"
                     /geo_loc_name="China:Jiangxi, Taihe"
                     /collection_date="2017-12"
WGS         JARURK010000001-JARURK010000161
WGS_SCAFLD  NZ_JARURK010000001-NZ_JARURK010000161
//
LOCUS       NZ_JARURV010000000   2193842 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Glaesserella parasuis strain GPS11 HNZY 2017-5, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JARURV000000000
VERSION     NZ_JARURV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34065119
            Assembly: GCF_029762795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2193842)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Whole-genome sequence analyses of Chinese Glaesserella parasuis
            isolates reveal extensive genomic variation, virulence genes and
            antibiotic resistance genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2193842)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-APR-2023) College of Veterinary Medicine, Huazhong
            Agricultural University, No. 1 Shizishan Street, Hongshan District,
            Wuhan, Hubei 430000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARURV000000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_JARURV000000000.  This version of the
            project (01) has the accession number NZ_JARURV010000000, and
            consists of sequences JARURV010000001-JARURV010000128.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029762795.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:58:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,174
            CDSs (total)                      :: 2,127
            Genes (coding)                    :: 2,033
            CDSs (with protein)               :: 2,033
            Genes (RNA)                       :: 47
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 94
            CDSs (without protein)            :: 94
            Pseudo Genes (ambiguous residues) :: 0 of 94
            Pseudo Genes (frameshifted)       :: 26 of 94
            Pseudo Genes (incomplete)         :: 63 of 94
            Pseudo Genes (internal stop)      :: 15 of 94
            Pseudo Genes (multiple problems)  :: 8 of 94
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2193842
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="GPS11 HNZY 2017-5"
                     /serotype="15"
                     /isolation_source="lung"
                     /host="pig"
                     /db_xref="taxon:738"
                     /geo_loc_name="China:Henan, Zhengyang"
                     /collection_date="2017-05"
WGS         JARURV010000001-JARURV010000128
WGS_SCAFLD  NZ_JARURV010000001-NZ_JARURV010000128
//
LOCUS       NZ_JARURU010000000   2186176 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Glaesserella parasuis strain GPS12 HNZY 2017-5, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JARURU000000000
VERSION     NZ_JARURU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34065120
            Assembly: GCF_029762815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2186176)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Whole-genome sequence analyses of Chinese Glaesserella parasuis
            isolates reveal extensive genomic variation, virulence genes and
            antibiotic resistance genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2186176)
  AUTHORS   He,Q. and Sun,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-APR-2023) College of Veterinary Medicine, Huazhong
            Agricultural University, No. 1 Shizishan Street, Hongshan District,
            Wuhan, Hubei 430000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARURU000000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_JARURU000000000.  This version of the
            project (01) has the accession number NZ_JARURU010000000, and
            consists of sequences JARURU010000001-JARURU010000122.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029762815.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:59:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,164
            CDSs (total)                      :: 2,118
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 46
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 38
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 95
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 27 of 95
            Pseudo Genes (incomplete)         :: 64 of 95
            Pseudo Genes (internal stop)      :: 14 of 95
            Pseudo Genes (multiple problems)  :: 8 of 95
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2186176
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="GPS12 HNZY 2017-5"
                     /serotype="1"
                     /isolation_source="brain"
                     /host="pig"
                     /db_xref="taxon:738"
                     /geo_loc_name="China:Henan, Zhengyang"
                     /collection_date="2017-05"
WGS         JARURU010000001-JARURU010000122
WGS_SCAFLD  NZ_JARURU010000001-NZ_JARURU010000122
//
LOCUS       NZ_JBMBQU010000000   2316794 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Glaesserella parasuis strain H6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBMBQU000000000
VERSION     NZ_JBMBQU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47218795
            Assembly: GCF_048922315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2316794)
  AUTHORS   Huang,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAR-2025) Liaocheng University, Liuyuan Street,
            Liaocheng, Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBMBQU000000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_JBMBQU000000000.  This version of the
            project (01) has the accession number NZ_JBMBQU010000000, and
            consists of sequences JBMBQU010000001-JBMBQU010000471.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. December-2024
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_048922315.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:36:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,612
            CDSs (total)                      :: 2,520
            Genes (coding)                    :: 2,326
            CDSs (with protein)               :: 2,326
            Genes (RNA)                       :: 92
            rRNAs                             :: 7, 7, 18 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 7, 18 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 194
            CDSs (without protein)            :: 194
            Pseudo Genes (ambiguous residues) :: 0 of 194
            Pseudo Genes (frameshifted)       :: 45 of 194
            Pseudo Genes (incomplete)         :: 158 of 194
            Pseudo Genes (internal stop)      :: 17 of 194
            Pseudo Genes (multiple problems)  :: 22 of 194
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2316794
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="H6"
                     /isolation_source="lung"
                     /host="swine"
                     /db_xref="taxon:738"
                     /geo_loc_name="China: Weifang"
                     /collection_date="2023-11-12"
WGS         JBMBQU010000001-JBMBQU010000471
WGS_SCAFLD  NZ_JBMBQU010000001-NZ_JBMBQU010000471
//
LOCUS       NZ_CDTCUB010000000   4436547 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Euzebyella marina isolate MarMAG_030411, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CDTCUB000000000
VERSION     NZ_CDTCUB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120697428
            Assembly: GCF_977300645.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Euzebyella marina (marine metagenome)
  ORGANISM  Euzebyella marina
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Euzebyella.
REFERENCE   1  (bases 1 to 4436547)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDTCUB000000000.1.
            The Euzebyella marina whole genome shotgun (WGS) project has the
            project accession NZ_CDTCUB000000000.  This version of the project
            (01) has the accession number NZ_CDTCUB010000000, and consists of
            sequences CDTCUB010000001-CDTCUB010000063.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977300645.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:18:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,844
            CDSs (total)                      :: 3,814
            Genes (coding)                    :: 3,796
            CDSs (with protein)               :: 3,796
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 18
            CDSs (without protein)            :: 18
            Pseudo Genes (ambiguous residues) :: 0 of 18
            Pseudo Genes (frameshifted)       :: 4 of 18
            Pseudo Genes (incomplete)         :: 14 of 18
            Pseudo Genes (internal stop)      :: 1 of 18
            Pseudo Genes (multiple problems)  :: 1 of 18
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4436547
                     /organism="Euzebyella marina"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_030411"
                     /db_xref="taxon:1761453"
                     /environmental_sample
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDTCUB010000001-CDTCUB010000063
WGS_SCAFLD  NZ_CDTCUB010000001-NZ_CDTCUB010000063
//
LOCUS       NZ_CDRUGZ020000000   7761782 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Legionella sp. WA2024007413, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CDRUGZ000000000
VERSION     NZ_CDRUGZ000000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA118545116
            Assembly: GCF_977063395.2
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella sp. WA2024007413
  ORGANISM  Legionella sp. WA2024007413
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 7761782)
  AUTHORS   Rios,B. and Krauze,P.
  CONSRTM   Labor am Landesgesundheitsamt BW
  TITLE     Direct Submission
  JOURNAL   Submitted (20-APR-2026) LGA BW, Labor am Landesgesundheitsamt,
            Nordbahnhofstrasse 135 70191 Stuttgart, Germany
REFERENCE   2  (bases 1 to 7761782)
  AUTHORS   Rios,B. and Krauze,P.
  CONSRTM   Labor am Landesgesundheitsamt BW
  TITLE     Direct Submission
  JOURNAL   Submitted (13-NOV-2025) LGA BW, Labor am Landesgesundheitsamt,
            Nordbahnhofstrasse 135 70191 Stuttgart, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDRUGZ000000000.2.
            
            On Apr 24, 2026 this sequence version replaced
            NZ_CDRUGZ000000000.1.
            The Legionella sp. WA2024007413 whole genome shotgun (WGS) project
            has the project accession NZ_CDRUGZ000000000.  This version of the
            project (02) has the accession number NZ_CDRUGZ020000000, and
            consists of sequences CDRUGZ020000001-CDRUGZ020000047.
            WA2024007413 annotation for Legionella sp. WA2024007413.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977063395.2-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 01:27:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,914
            CDSs (total)                      :: 6,778
            Genes (coding)                    :: 6,726
            CDSs (with protein)               :: 6,726
            Genes (RNA)                       :: 136
            rRNAs                             :: 6, 13, 17 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 2, 13, 17 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 10 of 52
            Pseudo Genes (incomplete)         :: 44 of 52
            Pseudo Genes (internal stop)      :: 6 of 52
            Pseudo Genes (multiple problems)  :: 8 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7761782
                     /organism="Legionella sp. WA2024007413"
                     /mol_type="genomic DNA"
                     /isolate="WA2024007413"
                     /db_xref="taxon:3438426"
                     /geo_loc_name="Germany"
                     /collection_date="2024-09-16"
WGS         CDRUGZ020000001-CDRUGZ020000047
WGS_SCAFLD  NZ_CDRUGZ020000001-NZ_CDRUGZ020000047
//
LOCUS       NZ_CDRUHA020000000   8668215 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Legionella sp. WA2022007384, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CDRUHA000000000
VERSION     NZ_CDRUHA000000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA118545115
            Assembly: GCF_977063405.2
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella sp. WA2022007384
  ORGANISM  Legionella sp. WA2022007384
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 8668215)
  AUTHORS   Rios,B. and Krauze,P.
  CONSRTM   Labor am Landesgesundheitsamt BW
  TITLE     Direct Submission
  JOURNAL   Submitted (20-APR-2026) LGA BW, Labor am Landesgesundheitsamt,
            Nordbahnhofstrasse 135 70191 Stuttgart, Germany
REFERENCE   2  (bases 1 to 8668215)
  AUTHORS   Rios,B. and Krauze,P.
  CONSRTM   Labor am Landesgesundheitsamt BW
  TITLE     Direct Submission
  JOURNAL   Submitted (13-NOV-2025) LGA BW, Labor am Landesgesundheitsamt,
            Nordbahnhofstrasse 135 70191 Stuttgart, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDRUHA000000000.2.
            
            On Apr 24, 2026 this sequence version replaced
            NZ_CDRUHA000000000.1.
            The Legionella sp. WA2022007384 whole genome shotgun (WGS) project
            has the project accession NZ_CDRUHA000000000.  This version of the
            project (02) has the accession number NZ_CDRUHA020000000, and
            consists of sequences CDRUHA020000001-CDRUHA020000111.
            WA2022007384 annotation for Legionella sp. WA2022007384.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977063405.2-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 01:31:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,718
            CDSs (total)                      :: 7,606
            Genes (coding)                    :: 7,546
            CDSs (with protein)               :: 7,546
            Genes (RNA)                       :: 112
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 2 (5S, 16S)
            partial rRNAs                     :: 2, 4, 6 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 22 of 60
            Pseudo Genes (incomplete)         :: 48 of 60
            Pseudo Genes (internal stop)      :: 10 of 60
            Pseudo Genes (multiple problems)  :: 14 of 60
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8668215
                     /organism="Legionella sp. WA2022007384"
                     /mol_type="genomic DNA"
                     /isolate="WA2022007384"
                     /db_xref="taxon:3438425"
                     /geo_loc_name="Germany"
                     /collection_date="2022-10-11"
WGS         CDRUHA020000001-CDRUHA020000111
WGS_SCAFLD  NZ_CDRUHA020000001-NZ_CDRUHA020000111
//
LOCUS       NZ_JVAF01000000      1838482 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Ligilactobacillus salivarius strain 609_LSAL, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JVAF00000000
VERSION     NZ_JVAF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03197809
            Assembly: GCF_001063855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ligilactobacillus salivarius
  ORGANISM  Ligilactobacillus salivarius
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 1838482)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1838482)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JVAF00000000.1.
            The Ligilactobacillus salivarius whole genome shotgun (WGS) project
            has the project accession NZ_JVAF00000000.  This version of the
            project (01) has the accession number NZ_JVAF01000000, and consists
            of sequences JVAF01000001-JVAF01000111.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 45x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001063855.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:33:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,859
            CDSs (total)                      :: 1,831
            Genes (coding)                    :: 1,774
            CDSs (with protein)               :: 1,774
            Genes (RNA)                       :: 28
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 15 of 57
            Pseudo Genes (incomplete)         :: 34 of 57
            Pseudo Genes (internal stop)      :: 13 of 57
            Pseudo Genes (multiple problems)  :: 5 of 57
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1838482
                     /organism="Ligilactobacillus salivarius"
                     /mol_type="genomic DNA"
                     /strain="609_LSAL"
                     /host="Homo sapiens"
                     /db_xref="taxon:1624"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JVAF01000001-JVAF01000111
WGS_SCAFLD  NZ_JVAF01000001-NZ_JVAF01000111
//
LOCUS       NZ_LFXB01000000      2838583 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mammaliicoccus sciuri strain BMSA 1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LFXB00000000
VERSION     NZ_LFXB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03835273
            Assembly: GCF_001051265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (bases 1 to 2838583)
  AUTHORS   Sharma,P., Reddy,D.P., Kumar,P.A., Gadicherla,R., George,N. and
            Bhandari,V.
  TITLE     Draft Genome Sequence of a Staphylococcus aureus Strain Isolated
            from a Cow with Clinical Mastitis
  JOURNAL   Genome Announc 3 (4), e00914-15 (2015)
   PUBMED   26294628
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2838583)
  AUTHORS   Sharma,P., Reddy,D.P., Kumar,P.A., Gadicherla,R., George,N. and
            Bhandari,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-JUL-2015) Infectious disease, National Institute of
            Animal Biotechnology (NIAB), D. No. 1-121/1, 4th and 5th Floors,
            Axis Clinicals Building, Opp. to Cinie Town, Miyapur, Hyderabad,
            Telangana 500046, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LFXB00000000.1.
            The Mammaliicoccus sciuri whole genome shotgun (WGS) project has
            the project accession NZ_LFXB00000000.  This version of the project
            (01) has the accession number NZ_LFXB01000000, and consists of
            sequences LFXB01000001-LFXB01000087.
            The organism was changed from 'Staphylococcus aureus' to
            'Staphylococcus sciuri' in July 2019.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_001051265.1
            Current Name        :: Staphylococcus sciuri
            Previous Name       :: Staphylococcus aureus
            Date Updated        :: 2019-07-17
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_001046995.1
            A1 Name             :: Staphylococcus sciuri
            A1 ANI              :: 97.04%
            A1 Query Coverage   :: 89.47%
            A1 Subject Coverage :: 91.04%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_001027105.1
            A2 Name             :: Staphylococcus aureus
            A2 ANI              :: 85.34%
            A2 Query Coverage   :: 3.67%
            A2 Subject Coverage :: 3.75%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPADES v. 3.1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 160.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001051265.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:39:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,918
            CDSs (total)                      :: 2,849
            Genes (coding)                    :: 2,800
            CDSs (with protein)               :: 2,800
            Genes (RNA)                       :: 69
            rRNAs                             :: 6, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 1, 3, 1 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 7 of 49
            Pseudo Genes (incomplete)         :: 45 of 49
            Pseudo Genes (internal stop)      :: 1 of 49
            Pseudo Genes (multiple problems)  :: 3 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2838583
                     /organism="Mammaliicoccus sciuri"
                     /mol_type="genomic DNA"
                     /strain="BMSA 1"
                     /isolation_source="milk from cattle"
                     /host="Bos taurus"
                     /db_xref="taxon:1296"
                     /geo_loc_name="India: Telangana"
                     /lat_lon="19.37 N 78.30 E"
                     /collection_date="2015-01-01"
                     /collected_by="Vasundhra bhandari"
WGS         LFXB01000001-LFXB01000087
WGS_SCAFLD  NZ_LFXB01000001-NZ_LFXB01000087
//
LOCUS       NZ_JXUG01000000      2453508 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Levilactobacillus brevis strain TMW 1.465, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JXUG00000000
VERSION     NZ_JXUG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03144672
            Assembly: GCF_000833395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Levilactobacillus brevis
  ORGANISM  Levilactobacillus brevis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
REFERENCE   1  (bases 1 to 2453508)
  AUTHORS   Behr,J., Preissler,P., Geissler,A.J., Ehrenreich,A., Angelov,A. and
            Vogel,R.F.
  TITLE     Identification of ecotype-specific marker genes for categorization
            of beer-spoiling Lactobacillus brevis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2453508)
  AUTHORS   Behr,J., Preissler,P., Geissler,A.J., Ehrenreich,A., Angelov,A. and
            Vogel,R.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2015) Technische Mikrobiologie, Technische
            Universitaet Muenchen, Gregor-Mendel-Strasse 4, Freising, Bavaria
            85354, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JXUG00000000.1.
            The Levilactobacillus brevis whole genome shotgun (WGS) project has
            the project accession NZ_JXUG00000000.  This version of the project
            (01) has the accession number NZ_JXUG01000000, and consists of
            sequences JXUG01000001-JXUG01000033.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Celera Assembler v. 6.1
            Genome Coverage       :: 22.88x
            Sequencing Technology :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000833395.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:38:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,555
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,282
            CDSs (with protein)               :: 2,282
            Genes (RNA)                       :: 76
            rRNAs                             :: 6, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 2, 4 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 197
            CDSs (without protein)            :: 197
            Pseudo Genes (ambiguous residues) :: 0 of 197
            Pseudo Genes (frameshifted)       :: 125 of 197
            Pseudo Genes (incomplete)         :: 76 of 197
            Pseudo Genes (internal stop)      :: 10 of 197
            Pseudo Genes (multiple problems)  :: 14 of 197
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2453508
                     /organism="Levilactobacillus brevis"
                     /mol_type="genomic DNA"
                     /strain="TMW 1.465"
                     /isolation_source="soft drink (brewery)"
                     /db_xref="taxon:1580"
WGS         JXUG01000001-JXUG01000033
WGS_SCAFLD  NZ_JXUG01000001-NZ_JXUG01000033
//
LOCUS       NZ_FNOI01000000      3580729 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Litoreibacter albidus strain DSM 26922, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNOI00000000
VERSION     NZ_FNOI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04488001
            Assembly: GCF_900107015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Litoreibacter albidus
  ORGANISM  Litoreibacter albidus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Litoreibacter.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNOI00000000.1.
            The Litoreibacter albidus whole genome shotgun (WGS) project has
            the project accession NZ_FNOI00000000.  This version of the project
            (01) has the accession number NZ_FNOI01000000, and consists of
            sequences FNOI01000001-FNOI01000012.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900107015.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:02:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,582
            CDSs (total)                      :: 3,518
            Genes (coding)                    :: 3,496
            CDSs (with protein)               :: 3,496
            Genes (RNA)                       :: 64
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 5 of 22
            Pseudo Genes (incomplete)         :: 16 of 22
            Pseudo Genes (internal stop)      :: 5 of 22
            Pseudo Genes (multiple problems)  :: 4 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3580729
                     /organism="Litoreibacter albidus"
                     /mol_type="genomic DNA"
                     /strain="DSM 26922"
                     /type_material="type strain of Litoreibacter albidus"
                     /db_xref="taxon:670155"
WGS         FNOI01000001-FNOI01000012
WGS_SCAFLD  NZ_FNOI01000001-NZ_FNOI01000012
//
LOCUS       NZ_FNWO01000000      3801567 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Magnetospirillum fulvum strain DSM 13234, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNWO00000000
VERSION     NZ_FNWO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04244559
            Assembly: GCF_900108475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Magnetospirillum fulvum
  ORGANISM  Magnetospirillum fulvum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodospirillales; Rhodospirillaceae; Magnetospirillum.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNWO00000000.1.
            The Magnetospirillum fulvum whole genome shotgun (WGS) project has
            the project accession NZ_FNWO00000000.  This version of the project
            (01) has the accession number NZ_FNWO01000000, and consists of
            sequences FNWO01000001-FNWO01000029.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900108475.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:03:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,425
            CDSs (total)                      :: 3,369
            Genes (coding)                    :: 3,344
            CDSs (with protein)               :: 3,344
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 25
            CDSs (without protein)            :: 25
            Pseudo Genes (ambiguous residues) :: 0 of 25
            Pseudo Genes (frameshifted)       :: 5 of 25
            Pseudo Genes (incomplete)         :: 23 of 25
            Pseudo Genes (internal stop)      :: 0 of 25
            Pseudo Genes (multiple problems)  :: 3 of 25
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3801567
                     /organism="Magnetospirillum fulvum"
                     /mol_type="genomic DNA"
                     /strain="DSM 13234"
                     /db_xref="taxon:1082"
WGS         FNWO01000001-FNWO01000029
WGS_SCAFLD  NZ_FNWO01000001-NZ_FNWO01000029
//
LOCUS       NZ_FOCQ01000000      3808548 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lihuaxuella thermophila strain DSM 46701, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOCQ00000000
VERSION     NZ_FOCQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05444955
            Assembly: GCF_900110165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lihuaxuella thermophila
  ORGANISM  Lihuaxuella thermophila
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Thermoactinomycetaceae; Lihuaxuella.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOCQ00000000.1.
            The Lihuaxuella thermophila whole genome shotgun (WGS) project has
            the project accession NZ_FOCQ00000000.  This version of the project
            (01) has the accession number NZ_FOCQ01000000, and consists of
            sequences FOCQ01000001-FOCQ01000040.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900110165.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:19:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,779
            CDSs (total)                      :: 3,695
            Genes (coding)                    :: 3,629
            CDSs (with protein)               :: 3,629
            Genes (RNA)                       :: 84
            rRNAs                             :: 5, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 4, 3, 5 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 19 of 66
            Pseudo Genes (incomplete)         :: 50 of 66
            Pseudo Genes (internal stop)      :: 7 of 66
            Pseudo Genes (multiple problems)  :: 9 of 66
            CRISPR Arrays                     :: 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3808548
                     /organism="Lihuaxuella thermophila"
                     /mol_type="genomic DNA"
                     /strain="DSM 46701"
                     /type_material="type strain of Lihuaxuella thermophila"
                     /db_xref="taxon:1173111"
WGS         FOCQ01000001-FOCQ01000040
WGS_SCAFLD  NZ_FOCQ01000001-NZ_FOCQ01000040
//
LOCUS       NZ_NBDY01000000      1828723 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Ligilactobacillus salivarius strain NCIMB8817, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NBDY00000000
VERSION     NZ_NBDY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06163275
            Assembly: GCF_002079925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ligilactobacillus salivarius
  ORGANISM  Ligilactobacillus salivarius
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 1828723)
  AUTHORS   Harris,H.M.
  TITLE     Phylogenomics and comparative genomics of Lactobacillus salivarius,
            a mammalian gut commensal
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1828723)
  AUTHORS   Harris,H.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-MAR-2017) Microbiology Department, University College
            Cork, Western road, Cork, Cork 0000, Ireland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NBDY00000000.1.
            The Ligilactobacillus salivarius whole genome shotgun (WGS) project
            has the project accession NZ_NBDY00000000.  This version of the
            project (01) has the accession number NZ_NBDY01000000, and consists
            of sequences NBDY01000001-NBDY01000036.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.07
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002079925.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:28:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,828
            CDSs (total)                      :: 1,773
            Genes (coding)                    :: 1,746
            CDSs (with protein)               :: 1,746
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 5 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 5 (23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 7 of 27
            Pseudo Genes (incomplete)         :: 17 of 27
            Pseudo Genes (internal stop)      :: 7 of 27
            Pseudo Genes (multiple problems)  :: 3 of 27
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1828723
                     /organism="Ligilactobacillus salivarius"
                     /mol_type="genomic DNA"
                     /strain="NCIMB8817"
                     /db_xref="taxon:1624"
WGS         NBDY01000001-NBDY01000036
WGS_SCAFLD  NZ_NBDY01000001-NZ_NBDY01000036
//
LOCUS       NZ_FOJW01000000      3666563 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lentibacillus halodurans strain CGMCC 1.3702, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOJW00000000
VERSION     NZ_FOJW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04488072
            Assembly: GCF_900112045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lentibacillus halodurans
  ORGANISM  Lentibacillus halodurans
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Lentibacillus.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOJW00000000.1.
            The Lentibacillus halodurans whole genome shotgun (WGS) project has
            the project accession NZ_FOJW00000000.  This version of the project
            (01) has the accession number NZ_FOJW01000000, and consists of
            sequences FOJW01000001-FOJW01000031.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900112045.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:29:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,635
            CDSs (total)                      :: 3,566
            Genes (coding)                    :: 3,478
            CDSs (with protein)               :: 3,478
            Genes (RNA)                       :: 69
            rRNAs                             :: 4, 5, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 1, 5, 2 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 88
            CDSs (without protein)            :: 88
            Pseudo Genes (ambiguous residues) :: 0 of 88
            Pseudo Genes (frameshifted)       :: 47 of 88
            Pseudo Genes (incomplete)         :: 53 of 88
            Pseudo Genes (internal stop)      :: 23 of 88
            Pseudo Genes (multiple problems)  :: 33 of 88
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3666563
                     /organism="Lentibacillus halodurans"
                     /mol_type="genomic DNA"
                     /strain="CGMCC 1.3702"
                     /type_material="type strain of Lentibacillus halodurans"
                     /db_xref="taxon:237679"
WGS         FOJW01000001-FOJW01000031
WGS_SCAFLD  NZ_FOJW01000001-NZ_FOJW01000031
//
LOCUS       NZ_NFHV01000000      1807598 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Ligilactobacillus salivarius strain An63, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NFHV00000000
VERSION     NZ_NFHV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06473742
            Assembly: GCF_002159345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ligilactobacillus salivarius
  ORGANISM  Ligilactobacillus salivarius
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 1807598)
  AUTHORS   Medvecky,M., Cejkova,D., Polansky,O., Karasova,D., Kubasova,T.,
            Cizek,A. and Rychlik,I.
  TITLE     Whole genome sequencing and function prediction of 133 gut
            anaerobes isolated from chicken caecum in pure cultures
  JOURNAL   BMC Genomics 19 (1), 561 (2018)
   PUBMED   30064352
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1807598)
  AUTHORS   Medvecky,M., Cejkova,D., Polansky,O., Karasova,D., Kubasova,T.,
            Cizek,A. and Rychlik,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-APR-2017) Immunology, Veterinary Research Institute,
            Hudciova 70, Brno 62100, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NFHV00000000.1.
            The Ligilactobacillus salivarius whole genome shotgun (WGS) project
            has the project accession NZ_NFHV00000000.  This version of the
            project (01) has the accession number NZ_NFHV01000000, and consists
            of sequences NFHV01000001-NFHV01000045.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: IDBA_UD v. 1.1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 431x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002159345.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:30:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,779
            CDSs (total)                      :: 1,710
            Genes (coding)                    :: 1,676
            CDSs (with protein)               :: 1,676
            Genes (RNA)                       :: 69
            rRNAs                             :: 2, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 4 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 7 of 34
            Pseudo Genes (incomplete)         :: 27 of 34
            Pseudo Genes (internal stop)      :: 3 of 34
            Pseudo Genes (multiple problems)  :: 3 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1807598
                     /organism="Ligilactobacillus salivarius"
                     /mol_type="genomic DNA"
                     /strain="An63"
                     /isolation_source="caecum"
                     /host="Gallus gallus"
                     /db_xref="taxon:1624"
                     /collection_date="2016"
WGS         NFHV01000001-NFHV01000045
WGS_SCAFLD  NZ_NFHV01000001-NZ_NFHV01000045
//
LOCUS       NZ_NFHF01000000      2090045 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Ligilactobacillus salivarius strain An84, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NFHF00000000
VERSION     NZ_NFHF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06473764
            Assembly: GCF_002161265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ligilactobacillus salivarius
  ORGANISM  Ligilactobacillus salivarius
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 2090045)
  AUTHORS   Medvecky,M., Cejkova,D., Polansky,O., Karasova,D., Kubasova,T.,
            Cizek,A. and Rychlik,I.
  TITLE     Whole genome sequencing and function prediction of 133 gut
            anaerobes isolated from chicken caecum in pure cultures
  JOURNAL   BMC Genomics 19 (1), 561 (2018)
   PUBMED   30064352
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2090045)
  AUTHORS   Medvecky,M., Cejkova,D., Polansky,O., Karasova,D., Kubasova,T.,
            Cizek,A. and Rychlik,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-APR-2017) Immunology, Veterinary Research Institute,
            Hudciova 70, Brno 62100, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NFHF00000000.1.
            The Ligilactobacillus salivarius whole genome shotgun (WGS) project
            has the project accession NZ_NFHF00000000.  This version of the
            project (01) has the accession number NZ_NFHF01000000, and consists
            of sequences NFHF01000001-NFHF01000076.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: IDBA_UD v. 1.1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 310x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002161265.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:33:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,103
            CDSs (total)                      :: 2,020
            Genes (coding)                    :: 1,977
            CDSs (with protein)               :: 1,977
            Genes (RNA)                       :: 83
            rRNAs                             :: 5, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 4, 5 (16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 8 of 43
            Pseudo Genes (incomplete)         :: 33 of 43
            Pseudo Genes (internal stop)      :: 6 of 43
            Pseudo Genes (multiple problems)  :: 4 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2090045
                     /organism="Ligilactobacillus salivarius"
                     /mol_type="genomic DNA"
                     /strain="An84"
                     /isolation_source="caecum"
                     /host="Gallus gallus"
                     /db_xref="taxon:1624"
                     /collection_date="2016"
WGS         NFHF01000001-NFHF01000076
WGS_SCAFLD  NZ_NFHF01000001-NZ_NFHF01000076
//
LOCUS       NZ_PZHA01000000      2826103 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mammaliicoccus sciuri strain SNUC 1760, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PZHA00000000
VERSION     NZ_PZHA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06173131
            Assembly: GCF_003042855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (bases 1 to 2826103)
  AUTHORS   Naushad,S., Barkema,H.W., Luby,C., Condas,L.A., Nobrega,D.B.,
            Carson,D.A. and De Buck,J.
  TITLE     Comprehensive Phylogenetic Analysis of Bovine Non-aureus
            Staphylococci Species Based on Whole-Genome Sequencing
  JOURNAL   Front Microbiol 7, 1990 (2016)
   PUBMED   28066335
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2826103)
  AUTHORS   Naushad,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAR-2018) Production Animal Health, University of
            Calgary, 3330 Hospital Drive NW, Calgary, Alberta T2N 4N1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PZHA00000000.1.
            The Mammaliicoccus sciuri whole genome shotgun (WGS) project has
            the project accession NZ_PZHA00000000.  This version of the project
            (01) has the accession number NZ_PZHA01000000, and consists of
            sequences PZHA01000001-PZHA01000184.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 29x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003042855.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:48:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,863
            CDSs (total)                      :: 2,801
            Genes (coding)                    :: 2,763
            CDSs (with protein)               :: 2,763
            Genes (RNA)                       :: 62
            rRNAs                             :: 6, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 38
            CDSs (without protein)            :: 38
            Pseudo Genes (ambiguous residues) :: 0 of 38
            Pseudo Genes (frameshifted)       :: 2 of 38
            Pseudo Genes (incomplete)         :: 35 of 38
            Pseudo Genes (internal stop)      :: 4 of 38
            Pseudo Genes (multiple problems)  :: 2 of 38
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2826103
                     /organism="Mammaliicoccus sciuri"
                     /mol_type="genomic DNA"
                     /strain="SNUC 1760"
                     /isolation_source="Herd 203"
                     /host="Bos taurus"
                     /db_xref="taxon:1296"
                     /geo_loc_name="Canada: Ontario"
                     /collection_date="2007-06-30"
                     /collected_by="Canadian Bovine Mastitis Research Network
                     (CBMRN)"
WGS         PZHA01000001-PZHA01000184
WGS_SCAFLD  NZ_PZHA01000001-NZ_PZHA01000184
//
LOCUS       NZ_RBHN01000000      3367831 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Legionella pneumophila strain NMB002490, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RBHN00000000
VERSION     NZ_RBHN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10142078
            Assembly: GCF_004169155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella pneumophila
  ORGANISM  Legionella pneumophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3367831)
  AUTHORS   Wuthrich,D., Gautsch,S., Spieler-Denz,R., Dubuis,O., Gaia,V.,
            Moran-Gilad,J., Hinic,V., Seth-Smith,H.M., Nickel,C.H.,
            Tschudin-Sutter,S., Bassetti,S., Haenggi,M., Brodmann,P., Fuchs,S.
            and Egli,A.
  TITLE     Air-conditioner cooling towers as complex reservoirs and continuous
            source of Legionella pneumophila infection evidenced by a genomic
            analysis study in 2017, Switzerland
  JOURNAL   Euro Surveill 24 (4) (2019)
   PUBMED   30696527
REFERENCE   2  (bases 1 to 3367831)
  AUTHORS   Wuthrich,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2018) Clinical Microbiology, University Hospital
            Basel, Petersgraben 4, Basel 4031, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RBHN00000000.1.
            The Legionella pneumophila whole genome shotgun (WGS) project has
            the project accession NZ_RBHN00000000.  This version of the project
            (01) has the accession number NZ_RBHN01000000, and consists of
            sequences RBHN01000001-RBHN01000045.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 219x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004169155.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:17:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,031
            CDSs (total)                      :: 2,979
            Genes (coding)                    :: 2,956
            CDSs (with protein)               :: 2,956
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 23
            CDSs (without protein)            :: 23
            Pseudo Genes (ambiguous residues) :: 0 of 23
            Pseudo Genes (frameshifted)       :: 8 of 23
            Pseudo Genes (incomplete)         :: 18 of 23
            Pseudo Genes (internal stop)      :: 1 of 23
            Pseudo Genes (multiple problems)  :: 3 of 23
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3367831
                     /organism="Legionella pneumophila"
                     /mol_type="genomic DNA"
                     /strain="NMB002490"
                     /isolation_source="Cooling tower"
                     /db_xref="taxon:446"
                     /geo_loc_name="Switzerland: Basel"
                     /lat_lon="47.55839 N 7.57327 E"
                     /collection_date="2017"
                     /collected_by="Cantonal laboratory City of Basel"
WGS         RBHN01000001-RBHN01000045
WGS_SCAFLD  NZ_RBHN01000001-NZ_RBHN01000045
//
LOCUS       NZ_RBGL01000000      3376929 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Legionella pneumophila strain NMB002537, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RBGL00000000
VERSION     NZ_RBGL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10142106
            Assembly: GCF_004169325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella pneumophila
  ORGANISM  Legionella pneumophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3376929)
  AUTHORS   Wuthrich,D., Gautsch,S., Spieler-Denz,R., Dubuis,O., Gaia,V.,
            Moran-Gilad,J., Hinic,V., Seth-Smith,H.M., Nickel,C.H.,
            Tschudin-Sutter,S., Bassetti,S., Haenggi,M., Brodmann,P., Fuchs,S.
            and Egli,A.
  TITLE     Air-conditioner cooling towers as complex reservoirs and continuous
            source of Legionella pneumophila infection evidenced by a genomic
            analysis study in 2017, Switzerland
  JOURNAL   Euro Surveill 24 (4) (2019)
   PUBMED   30696527
REFERENCE   2  (bases 1 to 3376929)
  AUTHORS   Wuthrich,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2018) Clinical Microbiology, University Hospital
            Basel, Petersgraben 4, Basel 4031, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RBGL00000000.1.
            The Legionella pneumophila whole genome shotgun (WGS) project has
            the project accession NZ_RBGL00000000.  This version of the project
            (01) has the accession number NZ_RBGL01000000, and consists of
            sequences RBGL01000001-RBGL01000046.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 199x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004169325.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:21:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,041
            CDSs (total)                      :: 2,992
            Genes (coding)                    :: 2,971
            CDSs (with protein)               :: 2,971
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 7 of 21
            Pseudo Genes (incomplete)         :: 14 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 2 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3376929
                     /organism="Legionella pneumophila"
                     /mol_type="genomic DNA"
                     /strain="NMB002537"
                     /isolation_source="Tap water/shower"
                     /db_xref="taxon:446"
                     /geo_loc_name="Switzerland: Basel"
                     /lat_lon="47.55839 N 7.57327 E"
                     /collection_date="2017"
                     /collected_by="Cantonal laboratory City of Basel"
WGS         RBGL01000001-RBGL01000046
WGS_SCAFLD  NZ_RBGL01000001-NZ_RBGL01000046
//
LOCUS       NZ_RBEL01000000      3369961 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Legionella pneumophila strain NMB001843, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RBEL00000000
VERSION     NZ_RBEL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10142158
            Assembly: GCF_004169975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella pneumophila
  ORGANISM  Legionella pneumophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3369961)
  AUTHORS   Wuthrich,D., Gautsch,S., Spieler-Denz,R., Dubuis,O., Gaia,V.,
            Moran-Gilad,J., Hinic,V., Seth-Smith,H.M., Nickel,C.H.,
            Tschudin-Sutter,S., Bassetti,S., Haenggi,M., Brodmann,P., Fuchs,S.
            and Egli,A.
  TITLE     Air-conditioner cooling towers as complex reservoirs and continuous
            source of Legionella pneumophila infection evidenced by a genomic
            analysis study in 2017, Switzerland
  JOURNAL   Euro Surveill 24 (4) (2019)
   PUBMED   30696527
REFERENCE   2  (bases 1 to 3369961)
  AUTHORS   Wuthrich,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2018) Clinical Microbiology, University Hospital
            Basel, Petersgraben 4, Basel 4031, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RBEL00000000.1.
            The Legionella pneumophila whole genome shotgun (WGS) project has
            the project accession NZ_RBEL00000000.  This version of the project
            (01) has the accession number NZ_RBEL01000000, and consists of
            sequences RBEL01000001-RBEL01000043.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 203x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004169975.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:25:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,026
            CDSs (total)                      :: 2,975
            Genes (coding)                    :: 2,955
            CDSs (with protein)               :: 2,955
            Genes (RNA)                       :: 51
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 8 of 20
            Pseudo Genes (incomplete)         :: 15 of 20
            Pseudo Genes (internal stop)      :: 1 of 20
            Pseudo Genes (multiple problems)  :: 3 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3369961
                     /organism="Legionella pneumophila"
                     /mol_type="genomic DNA"
                     /strain="NMB001843"
                     /isolation_source="clinical sample"
                     /db_xref="taxon:446"
                     /geo_loc_name="Switzerland: Basel"
                     /lat_lon="47.55839 N 7.57327 E"
                     /collection_date="2010"
                     /collected_by="USB"
WGS         RBEL01000001-RBEL01000043
WGS_SCAFLD  NZ_RBEL01000001-NZ_RBEL01000043
//
LOCUS       NZ_RBHC01000000      3331329 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Legionella pneumophila strain NMB001856, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RBHC00000000
VERSION     NZ_RBHC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10142089
            Assembly: GCF_004170225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella pneumophila
  ORGANISM  Legionella pneumophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3331329)
  AUTHORS   Wuthrich,D., Gautsch,S., Spieler-Denz,R., Dubuis,O., Gaia,V.,
            Moran-Gilad,J., Hinic,V., Seth-Smith,H.M., Nickel,C.H.,
            Tschudin-Sutter,S., Bassetti,S., Haenggi,M., Brodmann,P., Fuchs,S.
            and Egli,A.
  TITLE     Air-conditioner cooling towers as complex reservoirs and continuous
            source of Legionella pneumophila infection evidenced by a genomic
            analysis study in 2017, Switzerland
  JOURNAL   Euro Surveill 24 (4) (2019)
   PUBMED   30696527
REFERENCE   2  (bases 1 to 3331329)
  AUTHORS   Wuthrich,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2018) Clinical Microbiology, University Hospital
            Basel, Petersgraben 4, Basel 4031, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RBHC00000000.1.
            The Legionella pneumophila whole genome shotgun (WGS) project has
            the project accession NZ_RBHC00000000.  This version of the project
            (01) has the accession number NZ_RBHC01000000, and consists of
            sequences RBHC01000001-RBHC01000030.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 229x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004170225.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:18:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,992
            CDSs (total)                      :: 2,941
            Genes (coding)                    :: 2,921
            CDSs (with protein)               :: 2,921
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 2, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 9 of 20
            Pseudo Genes (incomplete)         :: 14 of 20
            Pseudo Genes (internal stop)      :: 1 of 20
            Pseudo Genes (multiple problems)  :: 3 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3331329
                     /organism="Legionella pneumophila"
                     /mol_type="genomic DNA"
                     /strain="NMB001856"
                     /isolation_source="clinical sample"
                     /db_xref="taxon:446"
                     /geo_loc_name="Switzerland: Basel"
                     /lat_lon="47.55839 N 7.57327 E"
                     /collection_date="2016"
                     /collected_by="USB"
WGS         RBHC01000001-RBHC01000030
WGS_SCAFLD  NZ_RBHC01000001-NZ_RBHC01000030
//
LOCUS       NZ_RBGK01000000      3357925 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Legionella pneumophila strain NMB002536, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RBGK00000000
VERSION     NZ_RBGK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10142107
            Assembly: GCF_004169625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella pneumophila
  ORGANISM  Legionella pneumophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3357925)
  AUTHORS   Wuthrich,D., Gautsch,S., Spieler-Denz,R., Dubuis,O., Gaia,V.,
            Moran-Gilad,J., Hinic,V., Seth-Smith,H.M., Nickel,C.H.,
            Tschudin-Sutter,S., Bassetti,S., Haenggi,M., Brodmann,P., Fuchs,S.
            and Egli,A.
  TITLE     Air-conditioner cooling towers as complex reservoirs and continuous
            source of Legionella pneumophila infection evidenced by a genomic
            analysis study in 2017, Switzerland
  JOURNAL   Euro Surveill 24 (4) (2019)
   PUBMED   30696527
REFERENCE   2  (bases 1 to 3357925)
  AUTHORS   Wuthrich,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2018) Clinical Microbiology, University Hospital
            Basel, Petersgraben 4, Basel 4031, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RBGK00000000.1.
            The Legionella pneumophila whole genome shotgun (WGS) project has
            the project accession NZ_RBGK00000000.  This version of the project
            (01) has the accession number NZ_RBGK01000000, and consists of
            sequences RBGK01000001-RBGK01000070.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 195x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004169625.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:19:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,026
            CDSs (total)                      :: 2,977
            Genes (coding)                    :: 2,953
            CDSs (with protein)               :: 2,953
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 6 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 3 of 24
            Pseudo Genes (multiple problems)  :: 2 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3357925
                     /organism="Legionella pneumophila"
                     /mol_type="genomic DNA"
                     /strain="NMB002536"
                     /isolation_source="Tap water/shower"
                     /db_xref="taxon:446"
                     /geo_loc_name="Switzerland: Basel"
                     /lat_lon="47.55839 N 7.57327 E"
                     /collection_date="2017"
                     /collected_by="Cantonal laboratory City of Basel"
WGS         RBGK01000001-RBGK01000070
WGS_SCAFLD  NZ_RBGK01000001-NZ_RBGK01000070
//
LOCUS       NZ_RBHQ01000000      3367741 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Legionella pneumophila strain NMB002471, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RBHQ00000000
VERSION     NZ_RBHQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10142075
            Assembly: GCF_004169185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella pneumophila
  ORGANISM  Legionella pneumophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3367741)
  AUTHORS   Wuthrich,D., Gautsch,S., Spieler-Denz,R., Dubuis,O., Gaia,V.,
            Moran-Gilad,J., Hinic,V., Seth-Smith,H.M., Nickel,C.H.,
            Tschudin-Sutter,S., Bassetti,S., Haenggi,M., Brodmann,P., Fuchs,S.
            and Egli,A.
  TITLE     Air-conditioner cooling towers as complex reservoirs and continuous
            source of Legionella pneumophila infection evidenced by a genomic
            analysis study in 2017, Switzerland
  JOURNAL   Euro Surveill 24 (4) (2019)
   PUBMED   30696527
REFERENCE   2  (bases 1 to 3367741)
  AUTHORS   Wuthrich,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2018) Clinical Microbiology, University Hospital
            Basel, Petersgraben 4, Basel 4031, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RBHQ00000000.1.
            The Legionella pneumophila whole genome shotgun (WGS) project has
            the project accession NZ_RBHQ00000000.  This version of the project
            (01) has the accession number NZ_RBHQ01000000, and consists of
            sequences RBHQ01000001-RBHQ01000043.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 166x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004169185.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,028
            CDSs (total)                      :: 2,978
            Genes (coding)                    :: 2,957
            CDSs (with protein)               :: 2,957
            Genes (RNA)                       :: 50
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 16 of 21
            Pseudo Genes (internal stop)      :: 1 of 21
            Pseudo Genes (multiple problems)  :: 3 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3367741
                     /organism="Legionella pneumophila"
                     /mol_type="genomic DNA"
                     /strain="NMB002471"
                     /isolation_source="Cooling tower"
                     /db_xref="taxon:446"
                     /geo_loc_name="Switzerland: Basel"
                     /lat_lon="47.55839 N 7.57327 E"
                     /collection_date="2017"
                     /collected_by="Cantonal laboratory City of Basel"
WGS         RBHQ01000001-RBHQ01000043
WGS_SCAFLD  NZ_RBHQ01000001-NZ_RBHQ01000043
//
LOCUS       NZ_RBEO01000000      3371106 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Legionella pneumophila strain NMB001841, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RBEO00000000
VERSION     NZ_RBEO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10142155
            Assembly: GCF_004170305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella pneumophila
  ORGANISM  Legionella pneumophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3371106)
  AUTHORS   Wuthrich,D., Gautsch,S., Spieler-Denz,R., Dubuis,O., Gaia,V.,
            Moran-Gilad,J., Hinic,V., Seth-Smith,H.M., Nickel,C.H.,
            Tschudin-Sutter,S., Bassetti,S., Haenggi,M., Brodmann,P., Fuchs,S.
            and Egli,A.
  TITLE     Air-conditioner cooling towers as complex reservoirs and continuous
            source of Legionella pneumophila infection evidenced by a genomic
            analysis study in 2017, Switzerland
  JOURNAL   Euro Surveill 24 (4) (2019)
   PUBMED   30696527
REFERENCE   2  (bases 1 to 3371106)
  AUTHORS   Wuthrich,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2018) Clinical Microbiology, University Hospital
            Basel, Petersgraben 4, Basel 4031, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RBEO00000000.1.
            The Legionella pneumophila whole genome shotgun (WGS) project has
            the project accession NZ_RBEO00000000.  This version of the project
            (01) has the accession number NZ_RBEO01000000, and consists of
            sequences RBEO01000001-RBEO01000059.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 236x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004170305.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:25:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,035
            CDSs (total)                      :: 2,991
            Genes (coding)                    :: 2,968
            CDSs (with protein)               :: 2,968
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 23
            CDSs (without protein)            :: 23
            Pseudo Genes (ambiguous residues) :: 0 of 23
            Pseudo Genes (frameshifted)       :: 4 of 23
            Pseudo Genes (incomplete)         :: 21 of 23
            Pseudo Genes (internal stop)      :: 1 of 23
            Pseudo Genes (multiple problems)  :: 2 of 23
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3371106
                     /organism="Legionella pneumophila"
                     /mol_type="genomic DNA"
                     /strain="NMB001841"
                     /isolation_source="clinical sample"
                     /db_xref="taxon:446"
                     /geo_loc_name="Switzerland: Basel"
                     /lat_lon="47.55839 N 7.57327 E"
                     /collection_date="2010"
                     /collected_by="USB"
WGS         RBEO01000001-RBEO01000059
WGS_SCAFLD  NZ_RBEO01000001-NZ_RBEO01000059
//
LOCUS       NZ_RBGN01000000      3359977 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Legionella pneumophila strain NMB002539, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RBGN00000000
VERSION     NZ_RBGN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10142104
            Assembly: GCF_004169055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella pneumophila
  ORGANISM  Legionella pneumophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3359977)
  AUTHORS   Wuthrich,D., Gautsch,S., Spieler-Denz,R., Dubuis,O., Gaia,V.,
            Moran-Gilad,J., Hinic,V., Seth-Smith,H.M., Nickel,C.H.,
            Tschudin-Sutter,S., Bassetti,S., Haenggi,M., Brodmann,P., Fuchs,S.
            and Egli,A.
  TITLE     Air-conditioner cooling towers as complex reservoirs and continuous
            source of Legionella pneumophila infection evidenced by a genomic
            analysis study in 2017, Switzerland
  JOURNAL   Euro Surveill 24 (4) (2019)
   PUBMED   30696527
REFERENCE   2  (bases 1 to 3359977)
  AUTHORS   Wuthrich,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2018) Clinical Microbiology, University Hospital
            Basel, Petersgraben 4, Basel 4031, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RBGN00000000.1.
            The Legionella pneumophila whole genome shotgun (WGS) project has
            the project accession NZ_RBGN00000000.  This version of the project
            (01) has the accession number NZ_RBGN01000000, and consists of
            sequences RBGN01000001-RBGN01000061.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 177x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004169055.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,033
            CDSs (total)                      :: 2,984
            Genes (coding)                    :: 2,960
            CDSs (with protein)               :: 2,960
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 6 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 3 of 24
            Pseudo Genes (multiple problems)  :: 2 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3359977
                     /organism="Legionella pneumophila"
                     /mol_type="genomic DNA"
                     /strain="NMB002539"
                     /isolation_source="Tap water/shower"
                     /db_xref="taxon:446"
                     /geo_loc_name="Switzerland: Basel"
                     /lat_lon="47.55839 N 7.57327 E"
                     /collection_date="2017"
                     /collected_by="Cantonal laboratory City of Basel"
WGS         RBGN01000001-RBGN01000061
WGS_SCAFLD  NZ_RBGN01000001-NZ_RBGN01000061
//
LOCUS       NZ_RBEH01000000      3446718 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Legionella pneumophila strain NMB001866, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RBEH00000000
VERSION     NZ_RBEH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10142162
            Assembly: GCF_004170285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella pneumophila
  ORGANISM  Legionella pneumophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3446718)
  AUTHORS   Wuthrich,D., Gautsch,S., Spieler-Denz,R., Dubuis,O., Gaia,V.,
            Moran-Gilad,J., Hinic,V., Seth-Smith,H.M., Nickel,C.H.,
            Tschudin-Sutter,S., Bassetti,S., Haenggi,M., Brodmann,P., Fuchs,S.
            and Egli,A.
  TITLE     Air-conditioner cooling towers as complex reservoirs and continuous
            source of Legionella pneumophila infection evidenced by a genomic
            analysis study in 2017, Switzerland
  JOURNAL   Euro Surveill 24 (4) (2019)
   PUBMED   30696527
REFERENCE   2  (bases 1 to 3446718)
  AUTHORS   Wuthrich,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2018) Clinical Microbiology, University Hospital
            Basel, Petersgraben 4, Basel 4031, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RBEH00000000.1.
            The Legionella pneumophila whole genome shotgun (WGS) project has
            the project accession NZ_RBEH00000000.  This version of the project
            (01) has the accession number NZ_RBEH01000000, and consists of
            sequences RBEH01000001-RBEH01000034.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 257x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004170285.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:27:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,118
            CDSs (total)                      :: 3,069
            Genes (coding)                    :: 3,048
            CDSs (with protein)               :: 3,048
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 6 of 21
            Pseudo Genes (incomplete)         :: 14 of 21
            Pseudo Genes (internal stop)      :: 4 of 21
            Pseudo Genes (multiple problems)  :: 2 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3446718
                     /organism="Legionella pneumophila"
                     /mol_type="genomic DNA"
                     /strain="NMB001866"
                     /isolation_source="clinical sample"
                     /db_xref="taxon:446"
                     /geo_loc_name="Switzerland: Basel"
                     /lat_lon="47.55839 N 7.57327 E"
                     /collection_date="2008"
                     /collected_by="USB"
WGS         RBEH01000001-RBEH01000034
WGS_SCAFLD  NZ_RBEH01000001-NZ_RBEH01000034
//
LOCUS       NZ_RBHP01000000      3369670 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Legionella pneumophila strain NMB002470, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RBHP00000000
VERSION     NZ_RBHP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10142076
            Assembly: GCF_004169425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella pneumophila
  ORGANISM  Legionella pneumophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3369670)
  AUTHORS   Wuthrich,D., Gautsch,S., Spieler-Denz,R., Dubuis,O., Gaia,V.,
            Moran-Gilad,J., Hinic,V., Seth-Smith,H.M., Nickel,C.H.,
            Tschudin-Sutter,S., Bassetti,S., Haenggi,M., Brodmann,P., Fuchs,S.
            and Egli,A.
  TITLE     Air-conditioner cooling towers as complex reservoirs and continuous
            source of Legionella pneumophila infection evidenced by a genomic
            analysis study in 2017, Switzerland
  JOURNAL   Euro Surveill 24 (4) (2019)
   PUBMED   30696527
REFERENCE   2  (bases 1 to 3369670)
  AUTHORS   Wuthrich,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2018) Clinical Microbiology, University Hospital
            Basel, Petersgraben 4, Basel 4031, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RBHP00000000.1.
            The Legionella pneumophila whole genome shotgun (WGS) project has
            the project accession NZ_RBHP00000000.  This version of the project
            (01) has the accession number NZ_RBHP01000000, and consists of
            sequences RBHP01000001-RBHP01000042.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 122x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004169425.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:22:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,025
            CDSs (total)                      :: 2,975
            Genes (coding)                    :: 2,954
            CDSs (with protein)               :: 2,954
            Genes (RNA)                       :: 50
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 16 of 21
            Pseudo Genes (internal stop)      :: 1 of 21
            Pseudo Genes (multiple problems)  :: 3 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3369670
                     /organism="Legionella pneumophila"
                     /mol_type="genomic DNA"
                     /strain="NMB002470"
                     /isolation_source="Cooling tower"
                     /db_xref="taxon:446"
                     /geo_loc_name="Switzerland: Basel"
                     /lat_lon="47.55839 N 7.57327 E"
                     /collection_date="2017"
                     /collected_by="Cantonal laboratory City of Basel"
WGS         RBHP01000001-RBHP01000042
WGS_SCAFLD  NZ_RBHP01000001-NZ_RBHP01000042
//
LOCUS       NZ_RBHR01000000      3369069 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Legionella pneumophila strain NMB002472, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RBHR00000000
VERSION     NZ_RBHR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10142074
            Assembly: GCF_004169435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella pneumophila
  ORGANISM  Legionella pneumophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3369069)
  AUTHORS   Wuthrich,D., Gautsch,S., Spieler-Denz,R., Dubuis,O., Gaia,V.,
            Moran-Gilad,J., Hinic,V., Seth-Smith,H.M., Nickel,C.H.,
            Tschudin-Sutter,S., Bassetti,S., Haenggi,M., Brodmann,P., Fuchs,S.
            and Egli,A.
  TITLE     Air-conditioner cooling towers as complex reservoirs and continuous
            source of Legionella pneumophila infection evidenced by a genomic
            analysis study in 2017, Switzerland
  JOURNAL   Euro Surveill 24 (4) (2019)
   PUBMED   30696527
REFERENCE   2  (bases 1 to 3369069)
  AUTHORS   Wuthrich,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2018) Clinical Microbiology, University Hospital
            Basel, Petersgraben 4, Basel 4031, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RBHR00000000.1.
            The Legionella pneumophila whole genome shotgun (WGS) project has
            the project accession NZ_RBHR00000000.  This version of the project
            (01) has the accession number NZ_RBHR01000000, and consists of
            sequences RBHR01000001-RBHR01000046.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 152x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004169435.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:19:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,027
            CDSs (total)                      :: 2,978
            Genes (coding)                    :: 2,957
            CDSs (with protein)               :: 2,957
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 16 of 21
            Pseudo Genes (internal stop)      :: 1 of 21
            Pseudo Genes (multiple problems)  :: 3 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3369069
                     /organism="Legionella pneumophila"
                     /mol_type="genomic DNA"
                     /strain="NMB002472"
                     /isolation_source="Cooling tower"
                     /db_xref="taxon:446"
                     /geo_loc_name="Switzerland: Basel"
                     /lat_lon="47.55839 N 7.57327 E"
                     /collection_date="2017"
                     /collected_by="Cantonal laboratory City of Basel"
WGS         RBHR01000001-RBHR01000046
WGS_SCAFLD  NZ_RBHR01000001-NZ_RBHR01000046
//
LOCUS       NZ_RBGM01000000      3369374 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Legionella pneumophila strain NMB002538, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RBGM00000000
VERSION     NZ_RBGM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10142105
            Assembly: GCF_004169045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella pneumophila
  ORGANISM  Legionella pneumophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3369374)
  AUTHORS   Wuthrich,D., Gautsch,S., Spieler-Denz,R., Dubuis,O., Gaia,V.,
            Moran-Gilad,J., Hinic,V., Seth-Smith,H.M., Nickel,C.H.,
            Tschudin-Sutter,S., Bassetti,S., Haenggi,M., Brodmann,P., Fuchs,S.
            and Egli,A.
  TITLE     Air-conditioner cooling towers as complex reservoirs and continuous
            source of Legionella pneumophila infection evidenced by a genomic
            analysis study in 2017, Switzerland
  JOURNAL   Euro Surveill 24 (4) (2019)
   PUBMED   30696527
REFERENCE   2  (bases 1 to 3369374)
  AUTHORS   Wuthrich,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2018) Clinical Microbiology, University Hospital
            Basel, Petersgraben 4, Basel 4031, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RBGM00000000.1.
            The Legionella pneumophila whole genome shotgun (WGS) project has
            the project accession NZ_RBGM00000000.  This version of the project
            (01) has the accession number NZ_RBGM01000000, and consists of
            sequences RBGM01000001-RBGM01000049.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 196x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004169045.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:25:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,035
            CDSs (total)                      :: 2,986
            Genes (coding)                    :: 2,963
            CDSs (with protein)               :: 2,963
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 23
            CDSs (without protein)            :: 23
            Pseudo Genes (ambiguous residues) :: 0 of 23
            Pseudo Genes (frameshifted)       :: 6 of 23
            Pseudo Genes (incomplete)         :: 17 of 23
            Pseudo Genes (internal stop)      :: 3 of 23
            Pseudo Genes (multiple problems)  :: 2 of 23
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3369374
                     /organism="Legionella pneumophila"
                     /mol_type="genomic DNA"
                     /strain="NMB002538"
                     /isolation_source="Tap water/shower"
                     /db_xref="taxon:446"
                     /geo_loc_name="Switzerland: Basel"
                     /lat_lon="47.55839 N 7.57327 E"
                     /collection_date="2017"
                     /collected_by="Cantonal laboratory City of Basel"
WGS         RBGM01000001-RBGM01000049
WGS_SCAFLD  NZ_RBGM01000001-NZ_RBGM01000049
//
LOCUS       NZ_JUPX01000000      3032125 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus rhamnosus strain 870_LRHA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JUPX00000000
VERSION     NZ_JUPX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03198077
            Assembly: GCF_001066715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 3032125)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3032125)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JUPX00000000.1.
            The Lacticaseibacillus rhamnosus whole genome shotgun (WGS) project
            has the project accession NZ_JUPX00000000.  This version of the
            project (01) has the accession number NZ_JUPX01000000, and consists
            of sequences JUPX01000001-JUPX01000248.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 37x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001066715.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:33:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,886
            CDSs (total)                      :: 2,840
            Genes (coding)                    :: 2,755
            CDSs (with protein)               :: 2,755
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 85
            CDSs (without protein)            :: 85
            Pseudo Genes (ambiguous residues) :: 0 of 85
            Pseudo Genes (frameshifted)       :: 31 of 85
            Pseudo Genes (incomplete)         :: 54 of 85
            Pseudo Genes (internal stop)      :: 12 of 85
            Pseudo Genes (multiple problems)  :: 12 of 85
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3032125
                     /organism="Lacticaseibacillus rhamnosus"
                     /mol_type="genomic DNA"
                     /strain="870_LRHA"
                     /host="Homo sapiens"
                     /db_xref="taxon:47715"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JUPX01000001-JUPX01000248
WGS_SCAFLD  NZ_JUPX01000001-NZ_JUPX01000248
//
LOCUS       NZ_VSTI01000000      1866511 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Ligilactobacillus salivarius strain NT64_1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VSTI00000000
VERSION     NZ_VSTI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12616971
            Assembly: GCF_009865705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ligilactobacillus salivarius
  ORGANISM  Ligilactobacillus salivarius
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 1866511)
  AUTHORS   Zhai,Q., Shen,X., Cen,S., Zhang,C., Tian,F., Zhao,J., Zhang,H.,
            Xue,Y. and Chen,W.
  TITLE     Screening of Lactobacillus salivarius strains from the feces of
            Chinese populations and the evaluation of their effects against
            intestinal inflammation in mice
  JOURNAL   Food Funct 11 (1), 221-235 (2020)
   PUBMED   31915776
REFERENCE   2  (bases 1 to 1866511)
  AUTHORS   Zhai,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-AUG-2019) School of Food Science and Technology,
            Jiangnan University, Jiangnan University, No. 1800 Lihu Ave., Wuxi,
            Jiangsu 214000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VSTI00000000.1.
            The Ligilactobacillus salivarius whole genome shotgun (WGS) project
            has the project accession NZ_VSTI00000000.  This version of the
            project (01) has the accession number NZ_VSTI01000000, and consists
            of sequences VSTI01000001-VSTI01000023.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 20x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009865705.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:29:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,846
            CDSs (total)                      :: 1,789
            Genes (coding)                    :: 1,737
            CDSs (with protein)               :: 1,737
            Genes (RNA)                       :: 57
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 15 of 52
            Pseudo Genes (incomplete)         :: 32 of 52
            Pseudo Genes (internal stop)      :: 12 of 52
            Pseudo Genes (multiple problems)  :: 6 of 52
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1866511
                     /organism="Ligilactobacillus salivarius"
                     /mol_type="genomic DNA"
                     /strain="NT64_1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1624"
                     /geo_loc_name="China"
WGS         VSTI01000001-VSTI01000023
WGS_SCAFLD  NZ_VSTI01000001-NZ_VSTI01000023
//
LOCUS       NZ_RQWG01000000      2126822 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leuconostoc mesenteroides strain B5, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RQWG00000000
VERSION     NZ_RQWG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10484942
            Assembly: GCF_004745755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leuconostoc mesenteroides
  ORGANISM  Leuconostoc mesenteroides
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Leuconostoc.
REFERENCE   1  (bases 1 to 2126822)
  AUTHORS   Yao,W.
  TITLE     Stress tolerance and comparative genomics of Leuconostoc
            mesenteroides B5
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2126822)
  AUTHORS   Yao,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-NOV-2018) College of Food Science and Technology,
            Shanghai Ocean University, 999 Hu Cheng Huan Road, Shanghai,
            Shanghai 201306, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RQWG00000000.1.
            The Leuconostoc mesenteroides whole genome shotgun (WGS) project
            has the project accession NZ_RQWG00000000.  This version of the
            project (01) has the accession number NZ_RQWG01000000, and consists
            of sequences RQWG01000001-RQWG01000026.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004745755.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:35:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,175
            CDSs (total)                      :: 2,115
            Genes (coding)                    :: 2,081
            CDSs (with protein)               :: 2,081
            Genes (RNA)                       :: 60
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 14 of 34
            Pseudo Genes (incomplete)         :: 14 of 34
            Pseudo Genes (internal stop)      :: 8 of 34
            Pseudo Genes (multiple problems)  :: 2 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2126822
                     /organism="Leuconostoc mesenteroides"
                     /mol_type="genomic DNA"
                     /strain="B5"
                     /isolation_source="Mike cake"
                     /db_xref="taxon:1245"
                     /geo_loc_name="China: Shanghai"
                     /collection_date="2014-07"
WGS         RQWG01000001-RQWG01000026
WGS_SCAFLD  NZ_RQWG01000001-NZ_RQWG01000026
//
LOCUS       NZ_VSVQ01000000      1860543 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Ligilactobacillus salivarius strain FHNXY73M9, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VSVQ00000000
VERSION     NZ_VSVQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12616910
            Assembly: GCF_009863735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ligilactobacillus salivarius
  ORGANISM  Ligilactobacillus salivarius
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 1860543)
  AUTHORS   Zhai,Q., Shen,X., Cen,S., Zhang,C., Tian,F., Zhao,J., Zhang,H.,
            Xue,Y. and Chen,W.
  TITLE     Screening of Lactobacillus salivarius strains from the feces of
            Chinese populations and the evaluation of their effects against
            intestinal inflammation in mice
  JOURNAL   Food Funct 11 (1), 221-235 (2020)
   PUBMED   31915776
REFERENCE   2  (bases 1 to 1860543)
  AUTHORS   Zhai,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-AUG-2019) School of Food Science and Technology,
            Jiangnan University, Jiangnan University, No. 1800 Lihu Ave., Wuxi,
            Jiangsu 214000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VSVQ00000000.1.
            The Ligilactobacillus salivarius whole genome shotgun (WGS) project
            has the project accession NZ_VSVQ00000000.  This version of the
            project (01) has the accession number NZ_VSVQ01000000, and consists
            of sequences VSVQ01000001-VSVQ01000055.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 20x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009863735.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:32:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,802
            CDSs (total)                      :: 1,756
            Genes (coding)                    :: 1,714
            CDSs (with protein)               :: 1,714
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 8 of 42
            Pseudo Genes (incomplete)         :: 26 of 42
            Pseudo Genes (internal stop)      :: 10 of 42
            Pseudo Genes (multiple problems)  :: 2 of 42
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1860543
                     /organism="Ligilactobacillus salivarius"
                     /mol_type="genomic DNA"
                     /strain="FHNXY73M9"
                     /host="Homo sapiens"
                     /db_xref="taxon:1624"
                     /geo_loc_name="China"
WGS         VSVQ01000001-VSVQ01000055
WGS_SCAFLD  NZ_VSVQ01000001-NZ_VSVQ01000055
//
LOCUS       NZ_JUWQ01000000      2955695 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus rhamnosus strain 699_LRHA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JUWQ00000000
VERSION     NZ_JUWQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03197902
            Assembly: GCF_001066975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 2955695)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2955695)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JUWQ00000000.1.
            The Lacticaseibacillus rhamnosus whole genome shotgun (WGS) project
            has the project accession NZ_JUWQ00000000.  This version of the
            project (01) has the accession number NZ_JUWQ01000000, and consists
            of sequences JUWQ01000001-JUWQ01000220.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 53x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001066975.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:36:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,842
            CDSs (total)                      :: 2,800
            Genes (coding)                    :: 2,728
            CDSs (with protein)               :: 2,728
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 72
            CDSs (without protein)            :: 72
            Pseudo Genes (ambiguous residues) :: 0 of 72
            Pseudo Genes (frameshifted)       :: 24 of 72
            Pseudo Genes (incomplete)         :: 39 of 72
            Pseudo Genes (internal stop)      :: 15 of 72
            Pseudo Genes (multiple problems)  :: 6 of 72
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2955695
                     /organism="Lacticaseibacillus rhamnosus"
                     /mol_type="genomic DNA"
                     /strain="699_LRHA"
                     /host="Homo sapiens"
                     /db_xref="taxon:47715"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JUWQ01000001-JUWQ01000220
WGS_SCAFLD  NZ_JUWQ01000001-NZ_JUWQ01000220
//
LOCUS       NZ_VSVZ01000000      1842381 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Ligilactobacillus salivarius strain FAHBZ_8M2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VSVZ00000000
VERSION     NZ_VSVZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12616901
            Assembly: GCF_009863905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ligilactobacillus salivarius
  ORGANISM  Ligilactobacillus salivarius
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 1842381)
  AUTHORS   Zhai,Q., Shen,X., Cen,S., Zhang,C., Tian,F., Zhao,J., Zhang,H.,
            Xue,Y. and Chen,W.
  TITLE     Screening of Lactobacillus salivarius strains from the feces of
            Chinese populations and the evaluation of their effects against
            intestinal inflammation in mice
  JOURNAL   Food Funct 11 (1), 221-235 (2020)
   PUBMED   31915776
REFERENCE   2  (bases 1 to 1842381)
  AUTHORS   Zhai,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-AUG-2019) School of Food Science and Technology,
            Jiangnan University, Jiangnan University, No. 1800 Lihu Ave., Wuxi,
            Jiangsu 214000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VSVZ00000000.1.
            The Ligilactobacillus salivarius whole genome shotgun (WGS) project
            has the project accession NZ_VSVZ00000000.  This version of the
            project (01) has the accession number NZ_VSVZ01000000, and consists
            of sequences VSVZ01000001-VSVZ01000050.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 20x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009863905.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:36:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,824
            CDSs (total)                      :: 1,786
            Genes (coding)                    :: 1,746
            CDSs (with protein)               :: 1,746
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 30
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 40
            CDSs (without protein)            :: 40
            Pseudo Genes (ambiguous residues) :: 0 of 40
            Pseudo Genes (frameshifted)       :: 19 of 40
            Pseudo Genes (incomplete)         :: 17 of 40
            Pseudo Genes (internal stop)      :: 11 of 40
            Pseudo Genes (multiple problems)  :: 6 of 40
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1842381
                     /organism="Ligilactobacillus salivarius"
                     /mol_type="genomic DNA"
                     /strain="FAHBZ_8M2"
                     /host="Homo sapiens"
                     /db_xref="taxon:1624"
                     /geo_loc_name="China"
WGS         VSVZ01000001-VSVZ01000050
WGS_SCAFLD  NZ_VSVZ01000001-NZ_VSVZ01000050
//
LOCUS       NZ_VSTJ01000000      1861162 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Ligilactobacillus salivarius strain NT62_5, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VSTJ00000000
VERSION     NZ_VSTJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12616970
            Assembly: GCF_009870175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ligilactobacillus salivarius
  ORGANISM  Ligilactobacillus salivarius
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 1861162)
  AUTHORS   Zhai,Q., Shen,X., Cen,S., Zhang,C., Tian,F., Zhao,J., Zhang,H.,
            Xue,Y. and Chen,W.
  TITLE     Screening of Lactobacillus salivarius strains from the feces of
            Chinese populations and the evaluation of their effects against
            intestinal inflammation in mice
  JOURNAL   Food Funct 11 (1), 221-235 (2020)
   PUBMED   31915776
REFERENCE   2  (bases 1 to 1861162)
  AUTHORS   Zhai,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-AUG-2019) School of Food Science and Technology,
            Jiangnan University, Jiangnan University, No. 1800 Lihu Ave., Wuxi,
            Jiangsu 214000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VSTJ00000000.1.
            The Ligilactobacillus salivarius whole genome shotgun (WGS) project
            has the project accession NZ_VSTJ00000000.  This version of the
            project (01) has the accession number NZ_VSTJ01000000, and consists
            of sequences VSTJ01000001-VSTJ01000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 20x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009870175.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:34:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,830
            CDSs (total)                      :: 1,788
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 15 of 50
            Pseudo Genes (incomplete)         :: 31 of 50
            Pseudo Genes (internal stop)      :: 12 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1861162
                     /organism="Ligilactobacillus salivarius"
                     /mol_type="genomic DNA"
                     /strain="NT62_5"
                     /host="Homo sapiens"
                     /db_xref="taxon:1624"
                     /geo_loc_name="China"
WGS         VSTJ01000001-VSTJ01000026
WGS_SCAFLD  NZ_VSTJ01000001-NZ_VSTJ01000026
//
LOCUS       NZ_RBHO01000000      3367071 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Legionella pneumophila strain NMB002491, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RBHO00000000
VERSION     NZ_RBHO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10142077
            Assembly: GCF_004169165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella pneumophila
  ORGANISM  Legionella pneumophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3367071)
  AUTHORS   Wuthrich,D., Gautsch,S., Spieler-Denz,R., Dubuis,O., Gaia,V.,
            Moran-Gilad,J., Hinic,V., Seth-Smith,H.M., Nickel,C.H.,
            Tschudin-Sutter,S., Bassetti,S., Haenggi,M., Brodmann,P., Fuchs,S.
            and Egli,A.
  TITLE     Air-conditioner cooling towers as complex reservoirs and continuous
            source of Legionella pneumophila infection evidenced by a genomic
            analysis study in 2017, Switzerland
  JOURNAL   Euro Surveill 24 (4) (2019)
   PUBMED   30696527
REFERENCE   2  (bases 1 to 3367071)
  AUTHORS   Wuthrich,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2018) Clinical Microbiology, University Hospital
            Basel, Petersgraben 4, Basel 4031, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RBHO00000000.1.
            The Legionella pneumophila whole genome shotgun (WGS) project has
            the project accession NZ_RBHO00000000.  This version of the project
            (01) has the accession number NZ_RBHO01000000, and consists of
            sequences RBHO01000001-RBHO01000034.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 172x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004169165.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:37:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,024
            CDSs (total)                      :: 2,973
            Genes (coding)                    :: 2,951
            CDSs (with protein)               :: 2,951
            Genes (RNA)                       :: 51
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 8 of 22
            Pseudo Genes (incomplete)         :: 17 of 22
            Pseudo Genes (internal stop)      :: 1 of 22
            Pseudo Genes (multiple problems)  :: 3 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3367071
                     /organism="Legionella pneumophila"
                     /mol_type="genomic DNA"
                     /strain="NMB002491"
                     /isolation_source="Cooling tower"
                     /db_xref="taxon:446"
                     /geo_loc_name="Switzerland: Basel"
                     /lat_lon="47.55839 N 7.57327 E"
                     /collection_date="2017"
                     /collected_by="Cantonal laboratory City of Basel"
WGS         RBHO01000001-RBHO01000034
WGS_SCAFLD  NZ_RBHO01000001-NZ_RBHO01000034
//
LOCUS       NZ_RBHE01000000      3366787 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Legionella pneumophila strain NMB001850, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RBHE00000000
VERSION     NZ_RBHE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10142087
            Assembly: GCF_004170215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella pneumophila
  ORGANISM  Legionella pneumophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3366787)
  AUTHORS   Wuthrich,D., Gautsch,S., Spieler-Denz,R., Dubuis,O., Gaia,V.,
            Moran-Gilad,J., Hinic,V., Seth-Smith,H.M., Nickel,C.H.,
            Tschudin-Sutter,S., Bassetti,S., Haenggi,M., Brodmann,P., Fuchs,S.
            and Egli,A.
  TITLE     Air-conditioner cooling towers as complex reservoirs and continuous
            source of Legionella pneumophila infection evidenced by a genomic
            analysis study in 2017, Switzerland
  JOURNAL   Euro Surveill 24 (4) (2019)
   PUBMED   30696527
REFERENCE   2  (bases 1 to 3366787)
  AUTHORS   Wuthrich,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2018) Clinical Microbiology, University Hospital
            Basel, Petersgraben 4, Basel 4031, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RBHE00000000.1.
            The Legionella pneumophila whole genome shotgun (WGS) project has
            the project accession NZ_RBHE00000000.  This version of the project
            (01) has the accession number NZ_RBHE01000000, and consists of
            sequences RBHE01000001-RBHE01000044.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 128x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004170215.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:36:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,029
            CDSs (total)                      :: 2,978
            Genes (coding)                    :: 2,958
            CDSs (with protein)               :: 2,958
            Genes (RNA)                       :: 51
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 1 (16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 8 of 20
            Pseudo Genes (incomplete)         :: 15 of 20
            Pseudo Genes (internal stop)      :: 1 of 20
            Pseudo Genes (multiple problems)  :: 3 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3366787
                     /organism="Legionella pneumophila"
                     /mol_type="genomic DNA"
                     /strain="NMB001850"
                     /isolation_source="clinical sample"
                     /db_xref="taxon:446"
                     /geo_loc_name="Switzerland: Basel"
                     /lat_lon="47.55839 N 7.57327 E"
                     /collection_date="2011"
                     /collected_by="USB"
WGS         RBHE01000001-RBHE01000044
WGS_SCAFLD  NZ_RBHE01000001-NZ_RBHE01000044
//
LOCUS       NZ_RBGY01000000      3372071 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Legionella pneumophila strain NMB001842, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RBGY00000000
VERSION     NZ_RBGY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10142093
            Assembly: GCF_004170185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella pneumophila
  ORGANISM  Legionella pneumophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3372071)
  AUTHORS   Wuthrich,D., Gautsch,S., Spieler-Denz,R., Dubuis,O., Gaia,V.,
            Moran-Gilad,J., Hinic,V., Seth-Smith,H.M., Nickel,C.H.,
            Tschudin-Sutter,S., Bassetti,S., Haenggi,M., Brodmann,P., Fuchs,S.
            and Egli,A.
  TITLE     Air-conditioner cooling towers as complex reservoirs and continuous
            source of Legionella pneumophila infection evidenced by a genomic
            analysis study in 2017, Switzerland
  JOURNAL   Euro Surveill 24 (4) (2019)
   PUBMED   30696527
REFERENCE   2  (bases 1 to 3372071)
  AUTHORS   Wuthrich,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2018) Clinical Microbiology, University Hospital
            Basel, Petersgraben 4, Basel 4031, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RBGY00000000.1.
            The Legionella pneumophila whole genome shotgun (WGS) project has
            the project accession NZ_RBGY00000000.  This version of the project
            (01) has the accession number NZ_RBGY01000000, and consists of
            sequences RBGY01000001-RBGY01000033.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 153x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004170185.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:31:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,024
            CDSs (total)                      :: 2,975
            Genes (coding)                    :: 2,954
            CDSs (with protein)               :: 2,954
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 16 of 21
            Pseudo Genes (internal stop)      :: 1 of 21
            Pseudo Genes (multiple problems)  :: 3 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3372071
                     /organism="Legionella pneumophila"
                     /mol_type="genomic DNA"
                     /strain="NMB001842"
                     /isolation_source="clinical sample"
                     /db_xref="taxon:446"
                     /geo_loc_name="Switzerland: Basel"
                     /lat_lon="47.55839 N 7.57327 E"
                     /collection_date="2010"
                     /collected_by="USB"
WGS         RBGY01000001-RBGY01000033
WGS_SCAFLD  NZ_RBGY01000001-NZ_RBGY01000033
//
LOCUS       NZ_JVNI01000000      3160377 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus paracasei strain 275_LPAR, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JVNI00000000
VERSION     NZ_JVNI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03197468
            Assembly: GCF_001076595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 3160377)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3160377)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JVNI00000000.1.
            The Lacticaseibacillus paracasei whole genome shotgun (WGS) project
            has the project accession NZ_JVNI00000000.  This version of the
            project (01) has the accession number NZ_JVNI01000000, and consists
            of sequences JVNI01000001-JVNI01000146.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 12x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001076595.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:41:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,083
            CDSs (total)                      :: 3,024
            Genes (coding)                    :: 2,914
            CDSs (with protein)               :: 2,914
            Genes (RNA)                       :: 59
            rRNAs                             :: 5, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 4, 3 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 110
            CDSs (without protein)            :: 110
            Pseudo Genes (ambiguous residues) :: 0 of 110
            Pseudo Genes (frameshifted)       :: 33 of 110
            Pseudo Genes (incomplete)         :: 78 of 110
            Pseudo Genes (internal stop)      :: 17 of 110
            Pseudo Genes (multiple problems)  :: 15 of 110
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3160377
                     /organism="Lacticaseibacillus paracasei"
                     /mol_type="genomic DNA"
                     /strain="275_LPAR"
                     /host="Homo sapiens"
                     /db_xref="taxon:1597"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JVNI01000001-JVNI01000146
WGS_SCAFLD  NZ_JVNI01000001-NZ_JVNI01000146
//
LOCUS       NZ_VSUB01000000      2129482 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Ligilactobacillus salivarius strain FYNDL5_1.scaf, whole genome
            shotgun sequencing project.
ACCESSION   NZ_VSUB00000000
VERSION     NZ_VSUB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12616952
            Assembly: GCF_009866025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ligilactobacillus salivarius
  ORGANISM  Ligilactobacillus salivarius
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 2129482)
  AUTHORS   Zhai,Q., Shen,X., Cen,S., Zhang,C., Tian,F., Zhao,J., Zhang,H.,
            Xue,Y. and Chen,W.
  TITLE     Screening of Lactobacillus salivarius strains from the feces of
            Chinese populations and the evaluation of their effects against
            intestinal inflammation in mice
  JOURNAL   Food Funct 11 (1), 221-235 (2020)
   PUBMED   31915776
REFERENCE   2  (bases 1 to 2129482)
  AUTHORS   Zhai,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-AUG-2019) School of Food Science and Technology,
            Jiangnan University, Jiangnan University, No. 1800 Lihu Ave., Wuxi,
            Jiangsu 214000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VSUB00000000.1.
            The Ligilactobacillus salivarius whole genome shotgun (WGS) project
            has the project accession NZ_VSUB00000000.  This version of the
            project (01) has the accession number NZ_VSUB01000000, and consists
            of sequences VSUB01000001-VSUB01000039.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 20x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009866025.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:38:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,138
            CDSs (total)                      :: 2,067
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 71
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 8 of 36
            Pseudo Genes (incomplete)         :: 23 of 36
            Pseudo Genes (internal stop)      :: 11 of 36
            Pseudo Genes (multiple problems)  :: 5 of 36
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2129482
                     /organism="Ligilactobacillus salivarius"
                     /mol_type="genomic DNA"
                     /strain="FYNDL5_1.scaf"
                     /host="Homo sapiens"
                     /db_xref="taxon:1624"
                     /geo_loc_name="China"
WGS         VSUB01000001-VSUB01000039
WGS_SCAFLD  NZ_VSUB01000001-NZ_VSUB01000039
//
LOCUS       NZ_JUON01000000      2966367 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus rhamnosus strain 906_LRHA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JUON00000000
VERSION     NZ_JUON00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03198113
            Assembly: GCF_001067885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 2966367)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2966367)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JUON00000000.1.
            The Lacticaseibacillus rhamnosus whole genome shotgun (WGS) project
            has the project accession NZ_JUON00000000.  This version of the
            project (01) has the accession number NZ_JUON01000000, and consists
            of sequences JUON01000001-JUON01000192.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 45x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001067885.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:40:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,796
            CDSs (total)                      :: 2,751
            Genes (coding)                    :: 2,687
            CDSs (with protein)               :: 2,687
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 29 of 64
            Pseudo Genes (incomplete)         :: 33 of 64
            Pseudo Genes (internal stop)      :: 13 of 64
            Pseudo Genes (multiple problems)  :: 10 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2966367
                     /organism="Lacticaseibacillus rhamnosus"
                     /mol_type="genomic DNA"
                     /strain="906_LRHA"
                     /host="Homo sapiens"
                     /db_xref="taxon:47715"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JUON01000001-JUON01000192
WGS_SCAFLD  NZ_JUON01000001-NZ_JUON01000192
//
LOCUS       NZ_RBGP01000000      3518713 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Legionella pneumophila strain NMB002520, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RBGP00000000
VERSION     NZ_RBGP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10142102
            Assembly: GCF_004169335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella pneumophila
  ORGANISM  Legionella pneumophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3518713)
  AUTHORS   Wuthrich,D., Gautsch,S., Spieler-Denz,R., Dubuis,O., Gaia,V.,
            Moran-Gilad,J., Hinic,V., Seth-Smith,H.M., Nickel,C.H.,
            Tschudin-Sutter,S., Bassetti,S., Haenggi,M., Brodmann,P., Fuchs,S.
            and Egli,A.
  TITLE     Air-conditioner cooling towers as complex reservoirs and continuous
            source of Legionella pneumophila infection evidenced by a genomic
            analysis study in 2017, Switzerland
  JOURNAL   Euro Surveill 24 (4) (2019)
   PUBMED   30696527
REFERENCE   2  (bases 1 to 3518713)
  AUTHORS   Wuthrich,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2018) Clinical Microbiology, University Hospital
            Basel, Petersgraben 4, Basel 4031, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RBGP00000000.1.
            The Legionella pneumophila whole genome shotgun (WGS) project has
            the project accession NZ_RBGP00000000.  This version of the project
            (01) has the accession number NZ_RBGP01000000, and consists of
            sequences RBGP01000001-RBGP01000047.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 165x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004169335.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:38:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,192
            CDSs (total)                      :: 3,144
            Genes (coding)                    :: 3,122
            CDSs (with protein)               :: 3,122
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 6 of 22
            Pseudo Genes (incomplete)         :: 17 of 22
            Pseudo Genes (internal stop)      :: 2 of 22
            Pseudo Genes (multiple problems)  :: 2 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3518713
                     /organism="Legionella pneumophila"
                     /mol_type="genomic DNA"
                     /strain="NMB002520"
                     /isolation_source="Tap water/sink"
                     /db_xref="taxon:446"
                     /geo_loc_name="Switzerland: Basel"
                     /lat_lon="47.55839 N 7.57327 E"
                     /collection_date="2017"
                     /collected_by="Cantonal laboratory City of Basel"
WGS         RBGP01000001-RBGP01000047
WGS_SCAFLD  NZ_RBGP01000001-NZ_RBGP01000047
//
LOCUS       NZ_JACJLI010000000   1854333 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Ligilactobacillus salivarius strain An453, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JACJLI000000000
VERSION     NZ_JACJLI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14913565
            Assembly: GCF_016902115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ligilactobacillus salivarius
  ORGANISM  Ligilactobacillus salivarius
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 1854333)
  AUTHORS   Juricova,H., Matiasovicova,J., Kubasova,T., Cejkova,D. and
            Rychlik,I.
  TITLE     The distribution of antibiotic resistance genes in chicken gut
            microbiota commensals
  JOURNAL   Sci Rep 11 (1), 3290 (2021)
   PUBMED   33558560
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1854333)
  AUTHORS   Cejkova,D., Kubasova,T., Jahodarova,E. and Rychlik,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-AUG-2020) Department of Microbiology, Veterinary
            Research Institute, Hudcova 70, Brno 62100, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JACJLI000000000.1.
            The Ligilactobacillus salivarius whole genome shotgun (WGS) project
            has the project accession NZ_JACJLI000000000.  This version of the
            project (01) has the accession number NZ_JACJLI010000000, and
            consists of sequences JACJLI010000001-JACJLI010000207.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: IDBA_UD v. idba-v1.1.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_016902115.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:57:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,896
            CDSs (total)                      :: 1,817
            Genes (coding)                    :: 1,746
            CDSs (with protein)               :: 1,746
            Genes (RNA)                       :: 79
            rRNAs                             :: 4, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 4, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 7 of 71
            Pseudo Genes (incomplete)         :: 61 of 71
            Pseudo Genes (internal stop)      :: 7 of 71
            Pseudo Genes (multiple problems)  :: 4 of 71
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1854333
                     /organism="Ligilactobacillus salivarius"
                     /mol_type="genomic DNA"
                     /strain="An453"
                     /host="Gallus gallus"
                     /db_xref="taxon:1624"
                     /collection_date="2017"
WGS         JACJLI010000001-JACJLI010000207
WGS_SCAFLD  NZ_JACJLI010000001-NZ_JACJLI010000207
//
LOCUS       NZ_JUMO01000000      2822092 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus rhamnosus strain 944_LRHA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JUMO00000000
VERSION     NZ_JUMO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03198164
            Assembly: GCF_001068215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 2822092)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2822092)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JUMO00000000.1.
            The Lacticaseibacillus rhamnosus whole genome shotgun (WGS) project
            has the project accession NZ_JUMO00000000.  This version of the
            project (01) has the accession number NZ_JUMO01000000, and consists
            of sequences JUMO01000001-JUMO01000145.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 25x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001068215.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:41:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,659
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,573
            CDSs (with protein)               :: 2,573
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 40
            CDSs (without protein)            :: 40
            Pseudo Genes (ambiguous residues) :: 0 of 40
            Pseudo Genes (frameshifted)       :: 14 of 40
            Pseudo Genes (incomplete)         :: 21 of 40
            Pseudo Genes (internal stop)      :: 12 of 40
            Pseudo Genes (multiple problems)  :: 6 of 40
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2822092
                     /organism="Lacticaseibacillus rhamnosus"
                     /mol_type="genomic DNA"
                     /strain="944_LRHA"
                     /host="Homo sapiens"
                     /db_xref="taxon:47715"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JUMO01000001-JUMO01000145
WGS_SCAFLD  NZ_JUMO01000001-NZ_JUMO01000145
//
LOCUS       NZ_JUMP01000000      3048598 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus rhamnosus strain 943_LRHA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JUMP00000000
VERSION     NZ_JUMP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03198163
            Assembly: GCF_001068195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 3048598)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3048598)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JUMP00000000.1.
            The Lacticaseibacillus rhamnosus whole genome shotgun (WGS) project
            has the project accession NZ_JUMP00000000.  This version of the
            project (01) has the accession number NZ_JUMP01000000, and consists
            of sequences JUMP01000001-JUMP01000212.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 22x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001068195.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:38:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,892
            CDSs (total)                      :: 2,846
            Genes (coding)                    :: 2,760
            CDSs (with protein)               :: 2,760
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 86
            CDSs (without protein)            :: 86
            Pseudo Genes (ambiguous residues) :: 0 of 86
            Pseudo Genes (frameshifted)       :: 32 of 86
            Pseudo Genes (incomplete)         :: 53 of 86
            Pseudo Genes (internal stop)      :: 15 of 86
            Pseudo Genes (multiple problems)  :: 14 of 86
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3048598
                     /organism="Lacticaseibacillus rhamnosus"
                     /mol_type="genomic DNA"
                     /strain="943_LRHA"
                     /host="Homo sapiens"
                     /db_xref="taxon:47715"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JUMP01000001-JUMP01000212
WGS_SCAFLD  NZ_JUMP01000001-NZ_JUMP01000212
//
LOCUS       NZ_CAKOCU010000000   2203459 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lactococcus petauri isolate Lactococcus_petauri_DSM109777, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CAKOCU000000000
VERSION     NZ_CAKOCU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA13256550
            Assembly: GCF_932750875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactococcus petauri
  ORGANISM  Lactococcus petauri
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Lactococcus.
REFERENCE   1  (bases 1 to 2203459)
  AUTHORS   Treichel,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-MAR-2022) RWTH Aachen University Hospital, Functional
            Microbiome Research Group, Pauwelsstrasse 30, 52074 Aachen, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAKOCU000000000.1.
            The Lactococcus petauri whole genome shotgun (WGS) project has the
            project accession NZ_CAKOCU000000000.  This version of the project
            (01) has the accession number NZ_CAKOCU010000000, and consists of
            sequences CAKOCU010000001-CAKOCU010000089.
            Genome of pure isolate Lactococcus_petauri_DSM109777 cultured from
            mouse cecal content.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_932750875.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:20:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,206
            CDSs (total)                      :: 2,151
            Genes (coding)                    :: 2,108
            CDSs (with protein)               :: 2,108
            Genes (RNA)                       :: 55
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 14 of 43
            Pseudo Genes (incomplete)         :: 27 of 43
            Pseudo Genes (internal stop)      :: 7 of 43
            Pseudo Genes (multiple problems)  :: 5 of 43
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2203459
                     /organism="Lactococcus petauri"
                     /mol_type="genomic DNA"
                     /isolate="Lactococcus_petauri_DSM109777"
                     /isolation_source="gut content"
                     /db_xref="taxon:1940789"
WGS         CAKOCU010000001-CAKOCU010000089
WGS_SCAFLD  NZ_CAKOCU010000001-NZ_CAKOCU010000089
//
LOCUS       NZ_JUWG01000000      2960739 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus rhamnosus strain 708_LRHA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JUWG00000000
VERSION     NZ_JUWG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03197912
            Assembly: GCF_001067025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 2960739)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2960739)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JUWG00000000.1.
            The Lacticaseibacillus rhamnosus whole genome shotgun (WGS) project
            has the project accession NZ_JUWG00000000.  This version of the
            project (01) has the accession number NZ_JUWG01000000, and consists
            of sequences JUWG01000001-JUWG01000166.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 26x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001067025.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:38:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,831
            CDSs (total)                      :: 2,787
            Genes (coding)                    :: 2,721
            CDSs (with protein)               :: 2,721
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 23 of 66
            Pseudo Genes (incomplete)         :: 32 of 66
            Pseudo Genes (internal stop)      :: 17 of 66
            Pseudo Genes (multiple problems)  :: 6 of 66
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2960739
                     /organism="Lacticaseibacillus rhamnosus"
                     /mol_type="genomic DNA"
                     /strain="708_LRHA"
                     /host="Homo sapiens"
                     /db_xref="taxon:47715"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JUWG01000001-JUWG01000166
WGS_SCAFLD  NZ_JUWG01000001-NZ_JUWG01000166
//
LOCUS       NZ_JALGPG010000000   2804628 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mammaliicoccus sciuri strain GDQ20D70P_3, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JALGPG000000000
VERSION     NZ_JALGPG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27022987
            Assembly: GCF_022810235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (bases 1 to 2804628)
  AUTHORS   Egyir,B., Owusu-Nyantakyi,C., Amuasi,G.R., Amoa,F.A. and Dsani,E.
  TITLE     Genomic Analysis and Antimicrobial Resistance in Staphylococci
            Isolated from Livestock and Farm Attendants in Northern Ghana
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2804628)
  AUTHORS   Egyir,B., Owusu-Nyantakyi,C., Amuasi,G.R., Amoa,F.A. and Dsani,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-MAR-2022) Bacteriology, Noguchi Memorial Institute
            fir Medical Research, S Legon drive, Accra 00233, Ghana
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALGPG000000000.1.
            The Mammaliicoccus sciuri whole genome shotgun (WGS) project has
            the project accession NZ_JALGPG000000000.  This version of the
            project (01) has the accession number NZ_JALGPG010000000, and
            consists of sequences JALGPG010000001-JALGPG010000064.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 56x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022810235.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:26:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,832
            CDSs (total)                      :: 2,773
            Genes (coding)                    :: 2,736
            CDSs (with protein)               :: 2,736
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 8 of 37
            Pseudo Genes (incomplete)         :: 23 of 37
            Pseudo Genes (internal stop)      :: 8 of 37
            Pseudo Genes (multiple problems)  :: 2 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2804628
                     /organism="Mammaliicoccus sciuri"
                     /mol_type="genomic DNA"
                     /strain="GDQ20D70P_3"
                     /isolation_source="nasal swab"
                     /host="Ovis aries"
                     /db_xref="taxon:1296"
                     /geo_loc_name="Ghana: Northern region"
                     /collection_date="2018"
WGS         JALGPG010000001-JALGPG010000064
WGS_SCAFLD  NZ_JALGPG010000001-NZ_JALGPG010000064
//
LOCUS       NZ_JUTB01000000      2977731 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus rhamnosus strain 784_LRHA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JUTB00000000
VERSION     NZ_JUTB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03197995
            Assembly: GCF_001067335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 2977731)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2977731)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JUTB00000000.1.
            The Lacticaseibacillus rhamnosus whole genome shotgun (WGS) project
            has the project accession NZ_JUTB00000000.  This version of the
            project (01) has the accession number NZ_JUTB01000000, and consists
            of sequences JUTB01000001-JUTB01000143.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 11x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001067335.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:43:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,831
            CDSs (total)                      :: 2,785
            Genes (coding)                    :: 2,723
            CDSs (with protein)               :: 2,723
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 23 of 62
            Pseudo Genes (incomplete)         :: 36 of 62
            Pseudo Genes (internal stop)      :: 11 of 62
            Pseudo Genes (multiple problems)  :: 7 of 62
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2977731
                     /organism="Lacticaseibacillus rhamnosus"
                     /mol_type="genomic DNA"
                     /strain="784_LRHA"
                     /host="Homo sapiens"
                     /db_xref="taxon:47715"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JUTB01000001-JUTB01000143
WGS_SCAFLD  NZ_JUTB01000001-NZ_JUTB01000143
//
LOCUS       NZ_RIVD01000000      2030874 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Limosilactobacillus fermentum strain 447, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RIVD00000000
VERSION     NZ_RIVD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10365681
            Assembly: GCF_025211175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Limosilactobacillus fermentum
  ORGANISM  Limosilactobacillus fermentum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Limosilactobacillus.
REFERENCE   1  (bases 1 to 2030874)
  AUTHORS   Lemmon,S.G., Walters,A.M., Schneider,K., Cocaign-Bousquet,M.,
            Lacroix,C., Lagler,S., Mondeil,S., Valence,F., Le Bourgeois,P.,
            Chuat,V., Jans,C., Fraud,S. and Chaston,J.M.
  TITLE     Genome sequences of lactic acid bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2030874)
  AUTHORS   Lemmon,S.G., Walters,A.M., Schneider,K., Cocaign-Bousquet,M.,
            Lacroix,C., Lagler,S., Mondeil,S., Valence,F., Le Bourgeois,P.,
            Chuat,V., Jans,C., Fraud,S. and Chaston,J.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-NOV-2018) Plant & Wildlife Sciences, Brigham Young
            University, 701 E University Pkwy, 4105 LSB, Provo, UT 84602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RIVD00000000.1.
            The Limosilactobacillus fermentum whole genome shotgun (WGS)
            project has the project accession NZ_RIVD00000000.  This version of
            the project (01) has the accession number NZ_RIVD01000000, and
            consists of sequences RIVD01000001-RIVD01000238.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method           :: Velvet v. 1.2.10
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: None
            Genome Coverage           :: 158x
            Sequencing Technology     :: Illumina 2x125
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_025211175.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:25:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,138
            CDSs (total)                      :: 2,069
            Genes (coding)                    :: 1,935
            CDSs (with protein)               :: 1,935
            Genes (RNA)                       :: 69
            rRNAs                             :: 6, 1, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 6, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 134
            CDSs (without protein)            :: 134
            Pseudo Genes (ambiguous residues) :: 0 of 134
            Pseudo Genes (frameshifted)       :: 30 of 134
            Pseudo Genes (incomplete)         :: 96 of 134
            Pseudo Genes (internal stop)      :: 27 of 134
            Pseudo Genes (multiple problems)  :: 17 of 134
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030874
                     /organism="Limosilactobacillus fermentum"
                     /mol_type="genomic DNA"
                     /strain="447"
                     /isolation_source="milk products"
                     /db_xref="taxon:1613"
                     /collection_date="2003"
WGS         RIVD01000001-RIVD01000238
WGS_SCAFLD  NZ_RIVD01000001-NZ_RIVD01000238
//
LOCUS       NZ_JVPR01000000      2960839 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus rhamnosus strain 214_LRHA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JVPR00000000
VERSION     NZ_JVPR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03197407
            Assembly: GCF_001062955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 2960839)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2960839)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JVPR00000000.1.
            The Lacticaseibacillus rhamnosus whole genome shotgun (WGS) project
            has the project accession NZ_JVPR00000000.  This version of the
            project (01) has the accession number NZ_JVPR01000000, and consists
            of sequences JVPR01000001-JVPR01000268.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 43x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001062955.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:44:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,823
            CDSs (total)                      :: 2,777
            Genes (coding)                    :: 2,711
            CDSs (with protein)               :: 2,711
            Genes (RNA)                       :: 46
            rRNAs                             :: 2, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 35
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 20 of 66
            Pseudo Genes (incomplete)         :: 42 of 66
            Pseudo Genes (internal stop)      :: 9 of 66
            Pseudo Genes (multiple problems)  :: 3 of 66
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2960839
                     /organism="Lacticaseibacillus rhamnosus"
                     /mol_type="genomic DNA"
                     /strain="214_LRHA"
                     /host="Homo sapiens"
                     /db_xref="taxon:47715"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JVPR01000001-JVPR01000268
WGS_SCAFLD  NZ_JVPR01000001-NZ_JVPR01000268
//
LOCUS       NZ_JVCX01000000      3015922 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus rhamnosus strain 541_LRHA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JVCX00000000
VERSION     NZ_JVCX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03197739
            Assembly: GCF_001065365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 3015922)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3015922)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JVCX00000000.1.
            The Lacticaseibacillus rhamnosus whole genome shotgun (WGS) project
            has the project accession NZ_JVCX00000000.  This version of the
            project (01) has the accession number NZ_JVCX01000000, and consists
            of sequences JVCX01000001-JVCX01000077.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 40x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001065365.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:43:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,816
            CDSs (total)                      :: 2,747
            Genes (coding)                    :: 2,679
            CDSs (with protein)               :: 2,679
            Genes (RNA)                       :: 69
            rRNAs                             :: 4, 6, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 6, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 55
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 34 of 68
            Pseudo Genes (incomplete)         :: 33 of 68
            Pseudo Genes (internal stop)      :: 13 of 68
            Pseudo Genes (multiple problems)  :: 12 of 68
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3015922
                     /organism="Lacticaseibacillus rhamnosus"
                     /mol_type="genomic DNA"
                     /strain="541_LRHA"
                     /host="Homo sapiens"
                     /db_xref="taxon:47715"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JVCX01000001-JVCX01000077
WGS_SCAFLD  NZ_JVCX01000001-NZ_JVCX01000077
//
LOCUS       NZ_JALGPM010000000   2752991 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mammaliicoccus sciuri strain GDQ20D70P_9, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JALGPM000000000
VERSION     NZ_JALGPM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27022993
            Assembly: GCF_022810145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (bases 1 to 2752991)
  AUTHORS   Egyir,B., Owusu-Nyantakyi,C., Amuasi,G.R., Amoa,F.A. and Dsani,E.
  TITLE     Genomic Analysis and Antimicrobial Resistance in Staphylococci
            Isolated from Livestock and Farm Attendants in Northern Ghana
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2752991)
  AUTHORS   Egyir,B., Owusu-Nyantakyi,C., Amuasi,G.R., Amoa,F.A. and Dsani,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-MAR-2022) Bacteriology, Noguchi Memorial Institute
            fir Medical Research, S Legon drive, Accra 00233, Ghana
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALGPM000000000.1.
            The Mammaliicoccus sciuri whole genome shotgun (WGS) project has
            the project accession NZ_JALGPM000000000.  This version of the
            project (01) has the accession number NZ_JALGPM010000000, and
            consists of sequences JALGPM010000001-JALGPM010000065.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 80x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022810145.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:24:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,739
            CDSs (total)                      :: 2,680
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 10 of 39
            Pseudo Genes (incomplete)         :: 26 of 39
            Pseudo Genes (internal stop)      :: 5 of 39
            Pseudo Genes (multiple problems)  :: 2 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2752991
                     /organism="Mammaliicoccus sciuri"
                     /mol_type="genomic DNA"
                     /strain="GDQ20D70P_9"
                     /isolation_source="nasal swab"
                     /host="Ovis aries"
                     /db_xref="taxon:1296"
                     /geo_loc_name="Ghana: Northern region"
                     /collection_date="2018"
WGS         JALGPM010000001-JALGPM010000065
WGS_SCAFLD  NZ_JALGPM010000001-NZ_JALGPM010000065
//
LOCUS       NZ_JUTS01000000      3004688 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus rhamnosus strain 769_LRHA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JUTS00000000
VERSION     NZ_JUTS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03197978
            Assembly: GCF_001067215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 3004688)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3004688)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JUTS00000000.1.
            The Lacticaseibacillus rhamnosus whole genome shotgun (WGS) project
            has the project accession NZ_JUTS00000000.  This version of the
            project (01) has the accession number NZ_JUTS01000000, and consists
            of sequences JUTS01000001-JUTS01000167.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 49x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001067215.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:45:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,823
            CDSs (total)                      :: 2,775
            Genes (coding)                    :: 2,709
            CDSs (with protein)               :: 2,709
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 42
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 29 of 66
            Pseudo Genes (incomplete)         :: 35 of 66
            Pseudo Genes (internal stop)      :: 13 of 66
            Pseudo Genes (multiple problems)  :: 11 of 66
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3004688
                     /organism="Lacticaseibacillus rhamnosus"
                     /mol_type="genomic DNA"
                     /strain="769_LRHA"
                     /host="Homo sapiens"
                     /db_xref="taxon:47715"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JUTS01000001-JUTS01000167
WGS_SCAFLD  NZ_JUTS01000001-NZ_JUTS01000167
//
LOCUS       NZ_JALHKG010000000   2129369 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leuconostoc mesenteroides strain SCB2313, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JALHKG000000000
VERSION     NZ_JALHKG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27008368
            Assembly: GCF_022832495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leuconostoc mesenteroides
  ORGANISM  Leuconostoc mesenteroides
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Leuconostoc.
REFERENCE   1  (bases 1 to 2129369)
  AUTHORS   Fang,X. and Fang,Z.
  TITLE     Astrain of Leuconostoc mesenteroides can ferment yogurt and has
            good antibacterial activity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2129369)
  AUTHORS   Fang,X. and Fang,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2022) South China Agricultural University, South
            China Agricultural University, Wushan Street, Guangzhou, Guangdong
            510642, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALHKG000000000.1.
            The Leuconostoc mesenteroides whole genome shotgun (WGS) project
            has the project accession NZ_JALHKG000000000.  This version of the
            project (01) has the accession number NZ_JALHKG010000000, and
            consists of sequences JALHKG010000001-JALHKG010000034.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: FEB-2022
            Assembly Method        :: ABySS v. 2.2.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 350.0x
            Sequencing Technology  :: Illumina novaseq6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022832495.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:21:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,207
            CDSs (total)                      :: 2,149
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 45
            CDSs (without protein)            :: 45
            Pseudo Genes (ambiguous residues) :: 0 of 45
            Pseudo Genes (frameshifted)       :: 17 of 45
            Pseudo Genes (incomplete)         :: 23 of 45
            Pseudo Genes (internal stop)      :: 8 of 45
            Pseudo Genes (multiple problems)  :: 3 of 45
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2129369
                     /organism="Leuconostoc mesenteroides"
                     /mol_type="genomic DNA"
                     /strain="SCB2313"
                     /isolation_source="kefir grains"
                     /db_xref="taxon:1245"
                     /geo_loc_name="China: Guangdong"
                     /collection_date="2013-09-10"
WGS         JALHKG010000001-JALHKG010000034
WGS_SCAFLD  NZ_JALHKG010000001-NZ_JALHKG010000034
//
LOCUS       NZ_JALGPF010000000   2803635 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mammaliicoccus sciuri strain GDQ20D70P_2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JALGPF000000000
VERSION     NZ_JALGPF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27022986
            Assembly: GCF_022810225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (bases 1 to 2803635)
  AUTHORS   Egyir,B., Owusu-Nyantakyi,C., Amuasi,G.R., Amoa,F.A. and Dsani,E.
  TITLE     Genomic Analysis and Antimicrobial Resistance in Staphylococci
            Isolated from Livestock and Farm Attendants in Northern Ghana
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2803635)
  AUTHORS   Egyir,B., Owusu-Nyantakyi,C., Amuasi,G.R., Amoa,F.A. and Dsani,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-MAR-2022) Bacteriology, Noguchi Memorial Institute
            fir Medical Research, S Legon drive, Accra 00233, Ghana
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALGPF000000000.1.
            The Mammaliicoccus sciuri whole genome shotgun (WGS) project has
            the project accession NZ_JALGPF000000000.  This version of the
            project (01) has the accession number NZ_JALGPF010000000, and
            consists of sequences JALGPF010000001-JALGPF010000061.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 38x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022810225.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:32:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,828
            CDSs (total)                      :: 2,769
            Genes (coding)                    :: 2,729
            CDSs (with protein)               :: 2,729
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 40
            CDSs (without protein)            :: 40
            Pseudo Genes (ambiguous residues) :: 0 of 40
            Pseudo Genes (frameshifted)       :: 8 of 40
            Pseudo Genes (incomplete)         :: 26 of 40
            Pseudo Genes (internal stop)      :: 8 of 40
            Pseudo Genes (multiple problems)  :: 2 of 40
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2803635
                     /organism="Mammaliicoccus sciuri"
                     /mol_type="genomic DNA"
                     /strain="GDQ20D70P_2"
                     /isolation_source="nasal swab"
                     /host="Ovis aries"
                     /db_xref="taxon:1296"
                     /geo_loc_name="Ghana: Northern region"
                     /collection_date="2018"
WGS         JALGPF010000001-JALGPF010000061
WGS_SCAFLD  NZ_JALGPF010000001-NZ_JALGPF010000061
//
LOCUS       NZ_FMUI01000000      4858922 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Kosakonia sacchari strain CGMCC 1.12102, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FMUI00000000
VERSION     NZ_FMUI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02927897
            Assembly: GCF_900100995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kosakonia sacchari
  ORGANISM  Kosakonia sacchari
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Kosakonia.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FMUI00000000.1.
            The Kosakonia sacchari whole genome shotgun (WGS) project has the
            project accession NZ_FMUI00000000.  This version of the project
            (01) has the accession number NZ_FMUI01000000, and consists of
            sequences FMUI01000001-FMUI01000031.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900100995.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:01:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,672
            CDSs (total)                      :: 4,589
            Genes (coding)                    :: 4,545
            CDSs (with protein)               :: 4,545
            Genes (RNA)                       :: 83
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 18 of 44
            Pseudo Genes (incomplete)         :: 33 of 44
            Pseudo Genes (internal stop)      :: 6 of 44
            Pseudo Genes (multiple problems)  :: 12 of 44
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4858922
                     /organism="Kosakonia sacchari"
                     /mol_type="genomic DNA"
                     /strain="CGMCC 1.12102"
                     /type_material="type strain of Enterobacter sacchari"
                     /db_xref="taxon:1158459"
WGS         FMUI01000001-FMUI01000031
WGS_SCAFLD  NZ_FMUI01000001-NZ_FMUI01000031
//
LOCUS       NZ_JUKV01000000      3046339 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus rhamnosus strain 988_LRHA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JUKV00000000
VERSION     NZ_JUKV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03198209
            Assembly: GCF_001068045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 3046339)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3046339)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JUKV00000000.1.
            The Lacticaseibacillus rhamnosus whole genome shotgun (WGS) project
            has the project accession NZ_JUKV00000000.  This version of the
            project (01) has the accession number NZ_JUKV01000000, and consists
            of sequences JUKV01000001-JUKV01000167.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 42x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001068045.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:00:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,818
            Genes (coding)                    :: 2,746
            CDSs (with protein)               :: 2,746
            Genes (RNA)                       :: 47
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 2, 1 (16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 72
            CDSs (without protein)            :: 72
            Pseudo Genes (ambiguous residues) :: 0 of 72
            Pseudo Genes (frameshifted)       :: 33 of 72
            Pseudo Genes (incomplete)         :: 38 of 72
            Pseudo Genes (internal stop)      :: 12 of 72
            Pseudo Genes (multiple problems)  :: 11 of 72
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3046339
                     /organism="Lacticaseibacillus rhamnosus"
                     /mol_type="genomic DNA"
                     /strain="988_LRHA"
                     /host="Homo sapiens"
                     /db_xref="taxon:47715"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JUKV01000001-JUKV01000167
WGS_SCAFLD  NZ_JUKV01000001-NZ_JUKV01000167
//
LOCUS       NZ_JBCAUN010000000   3581969 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Leifsonia stereocauli strain YIM 134122, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBCAUN000000000
VERSION     NZ_JBCAUN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40909092
            Assembly: GCF_038432415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leifsonia stereocauli
  ORGANISM  Leifsonia stereocauli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Leifsonia.
REFERENCE   1  (bases 1 to 3581969)
  AUTHORS   Zuo,S. and Xiong,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-APR-2024) Yunnan Institute of Microbiology, Yunnan
            universirty, East outer ring Road South, Kunming 650500, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCAUN000000000.1.
            The Leifsonia stereocauli whole genome shotgun (WGS) project has
            the project accession NZ_JBCAUN000000000.  This version of the
            project (01) has the accession number NZ_JBCAUN010000000, and
            consists of sequences JBCAUN010000001-JBCAUN010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038432415.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:31:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,379
            CDSs (total)                      :: 3,326
            Genes (coding)                    :: 3,316
            CDSs (with protein)               :: 3,316
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 1 of 10
            Pseudo Genes (incomplete)         :: 8 of 10
            Pseudo Genes (internal stop)      :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3581969
                     /organism="Leifsonia stereocauli"
                     /mol_type="genomic DNA"
                     /strain="YIM 134122"
                     /host="lichen"
                     /type_material="type strain of Leifsonia stereocauli"
                     /db_xref="taxon:3134136"
                     /geo_loc_name="China"
                     /collection_date="2023"
WGS         JBCAUN010000001-JBCAUN010000004
WGS_SCAFLD  NZ_JBCAUN010000001-NZ_JBCAUN010000004
//
LOCUS       NZ_FOMN01000000      1675053 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lactobacillus bombicola strain R-53102, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOMN00000000
VERSION     NZ_FOMN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04487792
            Assembly: GCF_900112665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactobacillus bombicola
  ORGANISM  Lactobacillus bombicola
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOMN00000000.1.
            The Lactobacillus bombicola whole genome shotgun (WGS) project has
            the project accession NZ_FOMN00000000.  This version of the project
            (01) has the accession number NZ_FOMN01000000, and consists of
            sequences FOMN01000001-FOMN01000020.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900112665.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:12:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,684
            CDSs (total)                      :: 1,619
            Genes (coding)                    :: 1,589
            CDSs (with protein)               :: 1,589
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 30
            CDSs (without protein)            :: 30
            Pseudo Genes (ambiguous residues) :: 0 of 30
            Pseudo Genes (frameshifted)       :: 14 of 30
            Pseudo Genes (incomplete)         :: 17 of 30
            Pseudo Genes (internal stop)      :: 9 of 30
            Pseudo Genes (multiple problems)  :: 8 of 30
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1675053
                     /organism="Lactobacillus bombicola"
                     /mol_type="genomic DNA"
                     /strain="R-53102"
                     /type_material="type strain of Lactobacillus bombicola"
                     /db_xref="taxon:1505723"
WGS         FOMN01000001-FOMN01000020
WGS_SCAFLD  NZ_FOMN01000001-NZ_FOMN01000020
//
LOCUS       NZ_JUPA01000000      2960633 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus rhamnosus strain 893_LRHA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JUPA00000000
VERSION     NZ_JUPA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03198100
            Assembly: GCF_001067625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 2960633)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2960633)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JUPA00000000.1.
            The Lacticaseibacillus rhamnosus whole genome shotgun (WGS) project
            has the project accession NZ_JUPA00000000.  This version of the
            project (01) has the accession number NZ_JUPA01000000, and consists
            of sequences JUPA01000001-JUPA01000191.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 48x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001067625.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:05:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,818
            CDSs (total)                      :: 2,774
            Genes (coding)                    :: 2,703
            CDSs (with protein)               :: 2,703
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 23 of 71
            Pseudo Genes (incomplete)         :: 45 of 71
            Pseudo Genes (internal stop)      :: 11 of 71
            Pseudo Genes (multiple problems)  :: 7 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2960633
                     /organism="Lacticaseibacillus rhamnosus"
                     /mol_type="genomic DNA"
                     /strain="893_LRHA"
                     /host="Homo sapiens"
                     /db_xref="taxon:47715"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JUPA01000001-JUPA01000191
WGS_SCAFLD  NZ_JUPA01000001-NZ_JUPA01000191
//
LOCUS       NZ_JBCDNA010000000   3631197 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lutimonas vermicola strain IMCC1616, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBCDNA000000000
VERSION     NZ_JBCDNA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40732650
            Assembly: GCF_038433205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lutimonas vermicola
  ORGANISM  Lutimonas vermicola
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Lutimonas.
REFERENCE   1  (bases 1 to 3631197)
  AUTHORS   Bae,S.S.
  TITLE     whole genome sequencing of Lutimonas vermicola strain IMCC1616
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3631197)
  AUTHORS   Bae,S.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2024) Marine Microorganisms Team, National Marine
            Biodiversity Institute of Korea, 101-75, Jangsan-ro, Janghang-eup,
            Seocheon-gun, Chungacheongnam-do 33662, South Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCDNA000000000.1.
            The Lutimonas vermicola whole genome shotgun (WGS) project has the
            project accession NZ_JBCDNA000000000.  This version of the project
            (01) has the accession number NZ_JBCDNA010000000, and consists of
            sequences JBCDNA010000001-JBCDNA010000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 149.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038433205.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:38:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,214
            CDSs (total)                      :: 3,171
            Genes (coding)                    :: 3,159
            CDSs (with protein)               :: 3,159
            Genes (RNA)                       :: 43
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 4 of 12
            Pseudo Genes (incomplete)         :: 7 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 1 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3631197
                     /organism="Lutimonas vermicola"
                     /mol_type="genomic DNA"
                     /strain="IMCC1616"
                     /isolation_source="marine polychaete"
                     /type_material="type strain of Lutimonas vermicola"
                     /db_xref="taxon:414288"
                     /geo_loc_name="South Korea"
                     /collection_date="2005-07"
WGS         JBCDNA010000001-JBCDNA010000005
WGS_SCAFLD  NZ_JBCDNA010000001-NZ_JBCDNA010000005
//
LOCUS       NZ_JVQV01000000      3045043 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus rhamnosus strain 186_LRHA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JVQV00000000
VERSION     NZ_JVQV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03197377
            Assembly: GCF_001062885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 3045043)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3045043)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JVQV00000000.1.
            The Lacticaseibacillus rhamnosus whole genome shotgun (WGS) project
            has the project accession NZ_JVQV00000000.  This version of the
            project (01) has the accession number NZ_JVQV01000000, and consists
            of sequences JVQV01000001-JVQV01000096.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 39x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001062885.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:38:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,893
            CDSs (total)                      :: 2,828
            Genes (coding)                    :: 2,755
            CDSs (with protein)               :: 2,755
            Genes (RNA)                       :: 65
            rRNAs                             :: 2, 5, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 5 (16S)
            tRNAs                             :: 54
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 73
            CDSs (without protein)            :: 73
            Pseudo Genes (ambiguous residues) :: 0 of 73
            Pseudo Genes (frameshifted)       :: 21 of 73
            Pseudo Genes (incomplete)         :: 51 of 73
            Pseudo Genes (internal stop)      :: 11 of 73
            Pseudo Genes (multiple problems)  :: 8 of 73
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3045043
                     /organism="Lacticaseibacillus rhamnosus"
                     /mol_type="genomic DNA"
                     /strain="186_LRHA"
                     /host="Homo sapiens"
                     /db_xref="taxon:47715"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JVQV01000001-JVQV01000096
WGS_SCAFLD  NZ_JVQV01000001-NZ_JVQV01000096
//
LOCUS       NZ_LGHR01000000      1945263 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lactobacillus delbrueckii subsp. allosunkii strain JCM 17838, whole
            genome shotgun sequencing project.
ACCESSION   NZ_LGHR00000000
VERSION     NZ_LGHR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03852102
            Assembly: GCF_001190005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactobacillus delbrueckii subsp. allosunkii
  ORGANISM  Lactobacillus delbrueckii subsp. allosunkii
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (bases 1 to 1945263)
  AUTHORS   Yi,H.
  TITLE     Genome sequencing of Lactobacillus delbrueckii subsp. sunkii JCM
            17838
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1945263)
  AUTHORS   Yi,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JUL-2015) Research Team, ChunLab, Inc, Bldg 105-1,
            Suite 307, SNU, 1 Gwanak-ro, Gwanak-gu, Seoul 151-742, South Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LGHR00000000.1.
            The Lactobacillus delbrueckii subsp. allosunkii whole genome
            shotgun (WGS) project has the project accession NZ_LGHR00000000.
            This version of the project (01) has the accession number
            NZ_LGHR01000000, and consists of sequences
            LGHR01000001-LGHR01000032.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC Genomics Workbench v. 6.5.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 565.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001190005.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:48:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,955
            CDSs (total)                      :: 1,866
            Genes (coding)                    :: 1,804
            CDSs (with protein)               :: 1,804
            Genes (RNA)                       :: 89
            rRNAs                             :: 7, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 20 of 62
            Pseudo Genes (incomplete)         :: 39 of 62
            Pseudo Genes (internal stop)      :: 14 of 62
            Pseudo Genes (multiple problems)  :: 10 of 62
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1945263
                     /organism="Lactobacillus delbrueckii subsp. allosunkii"
                     /mol_type="genomic DNA"
                     /strain="JCM 17838"
                     /isolation_source="sunki, Japanese traditional fermented
                     vegetable"
                     /sub_species="allosunkii"
                     /culture_collection="JCM:17838"
                     /type_material="type strain of Lactobacillus delbrueckii
                     subsp. allosunkii"
                     /db_xref="taxon:1050107"
                     /geo_loc_name="Korea: Seoul"
                     /collection_date="2014"
WGS         LGHR01000001-LGHR01000032
WGS_SCAFLD  NZ_LGHR01000001-NZ_LGHR01000032
//
LOCUS       NZ_RAGF01000000      2415011 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lactococcus lactis strain 1064-C11, whole genome shotgun sequencing
            project.
ACCESSION   NZ_RAGF00000000
VERSION     NZ_RAGF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10095200
            Assembly: GCF_003838305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactococcus lactis
  ORGANISM  Lactococcus lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Lactococcus.
REFERENCE   1  (bases 1 to 2415011)
  AUTHORS   Lopez-Gonzalez,M.J., Escobedo,S., Rodriguez,A., Neves,A.R.,
            Janzen,T. and Martinez,B.
  TITLE     Adaptive Evolution of Industrial Lactococcus lactis Under Cell
            Envelope Stress Provides Phenotypic Diversity
  JOURNAL   Front Microbiol 9, 2654 (2018)
   PUBMED   30455679
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2415011)
  AUTHORS   Lopez-Gonzales,M.J., Escobedo,S., Rodriguez,A., Neves,A.R.,
            Janzen,T. and Martinez,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-SEP-2018) Strain Development, Chr. Hansen, Boege Alle
            10-12, Hoersholm 2970, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RAGF00000000.1.
            The Lactococcus lactis whole genome shotgun (WGS) project has the
            project accession NZ_RAGF00000000.  This version of the project
            (01) has the accession number NZ_RAGF01000000, and consists of
            sequences RAGF01000001-RAGF01000046.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC workbench v. 10.1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 60x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003838305.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:05:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,417
            CDSs (total)                      :: 2,362
            Genes (coding)                    :: 2,295
            CDSs (with protein)               :: 2,295
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 20 of 67
            Pseudo Genes (incomplete)         :: 37 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 3 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2415011
                     /organism="Lactococcus lactis"
                     /mol_type="genomic DNA"
                     /strain="1064-C11"
                     /isolation_source="laboratory"
                     /db_xref="taxon:1358"
                     /geo_loc_name="Spain"
                     /collection_date="2016-01-01"
WGS         RAGF01000001-RAGF01000046
WGS_SCAFLD  NZ_RAGF01000001-NZ_RAGF01000046
//
LOCUS       NZ_CDSWYF010000000   3911915 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Leeuwenhoekiella palythoae isolate MarMAG_100329, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDSWYF000000000
VERSION     NZ_CDSWYF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120697424
            Assembly: GCF_977261215.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Leeuwenhoekiella palythoae (marine metagenome)
  ORGANISM  Leeuwenhoekiella palythoae
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Leeuwenhoekiella.
REFERENCE   1  (bases 1 to 3911915)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDSWYF000000000.1.
            The Leeuwenhoekiella palythoae whole genome shotgun (WGS) project
            has the project accession NZ_CDSWYF000000000.  This version of the
            project (01) has the accession number NZ_CDSWYF010000000, and
            consists of sequences CDSWYF010000001-CDSWYF010000038.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977261215.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:21:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,438
            CDSs (total)                      :: 3,402
            Genes (coding)                    :: 3,390
            CDSs (with protein)               :: 3,390
            Genes (RNA)                       :: 36
            tRNAs                             :: 32
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 1 of 12
            Pseudo Genes (incomplete)         :: 8 of 12
            Pseudo Genes (internal stop)      :: 3 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3911915
                     /organism="Leeuwenhoekiella palythoae"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_100329"
                     /db_xref="taxon:573501"
                     /environmental_sample
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDSWYF010000001-CDSWYF010000038
WGS_SCAFLD  NZ_CDSWYF010000001-NZ_CDSWYF010000038
//
LOCUS       NZ_RAGE01000000      2418502 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lactococcus lactis strain 1064-E11, whole genome shotgun sequencing
            project.
ACCESSION   NZ_RAGE00000000
VERSION     NZ_RAGE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10095201
            Assembly: GCF_003838385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactococcus lactis
  ORGANISM  Lactococcus lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Lactococcus.
REFERENCE   1  (bases 1 to 2418502)
  AUTHORS   Lopez-Gonzalez,M.J., Escobedo,S., Rodriguez,A., Neves,A.R.,
            Janzen,T. and Martinez,B.
  TITLE     Adaptive Evolution of Industrial Lactococcus lactis Under Cell
            Envelope Stress Provides Phenotypic Diversity
  JOURNAL   Front Microbiol 9, 2654 (2018)
   PUBMED   30455679
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2418502)
  AUTHORS   Lopez-Gonzales,M.J., Escobedo,S., Rodriguez,A., Neves,A.R.,
            Janzen,T. and Martinez,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-SEP-2018) Strain Development, Chr. Hansen, Boege Alle
            10-12, Hoersholm 2970, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RAGE00000000.1.
            The Lactococcus lactis whole genome shotgun (WGS) project has the
            project accession NZ_RAGE00000000.  This version of the project
            (01) has the accession number NZ_RAGE01000000, and consists of
            sequences RAGE01000001-RAGE01000045.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC workbench v. 10.1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 72x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003838385.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:18:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,425
            CDSs (total)                      :: 2,371
            Genes (coding)                    :: 2,305
            CDSs (with protein)               :: 2,305
            Genes (RNA)                       :: 54
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 20 of 66
            Pseudo Genes (incomplete)         :: 36 of 66
            Pseudo Genes (internal stop)      :: 14 of 66
            Pseudo Genes (multiple problems)  :: 3 of 66
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2418502
                     /organism="Lactococcus lactis"
                     /mol_type="genomic DNA"
                     /strain="1064-E11"
                     /isolation_source="laboratory"
                     /db_xref="taxon:1358"
                     /geo_loc_name="Spain"
                     /collection_date="2016-01-01"
WGS         RAGE01000001-RAGE01000045
WGS_SCAFLD  NZ_RAGE01000001-NZ_RAGE01000045
//
LOCUS       NZ_SETJ01000000      2011423 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lactobacillus delbrueckii strain LDELB18P1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SETJ00000000
VERSION     NZ_SETJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10799027
            Assembly: GCF_004211505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactobacillus delbrueckii
  ORGANISM  Lactobacillus delbrueckii
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (bases 1 to 2011423)
  AUTHORS   Lugli,G.A. and Milani,C.
  TITLE     Colonization of the human gut by bovine bacteria present in
            Parmesan cheese
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2011423)
  AUTHORS   Lugli,G.A. and Milani,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JAN-2019) Department of Chemistry, Life Sciences and
            Environmental Sustainability, University of Parma, Via Parco Area
            delle Scienze 11/A, Parma, Parma 43124, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SETJ00000000.1.
            The Lactobacillus delbrueckii whole genome shotgun (WGS) project
            has the project accession NZ_SETJ00000000.  This version of the
            project (01) has the accession number NZ_SETJ01000000, and consists
            of sequences SETJ01000001-SETJ01000108.
            Bacteria available from Probiogenomics Lab (Parma) bacteria
            collection.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SPAdes v. 3.12.0
            Genome Coverage       :: 148x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004211505.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:21:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,065
            CDSs (total)                      :: 1,974
            Genes (coding)                    :: 1,850
            CDSs (with protein)               :: 1,850
            Genes (RNA)                       :: 91
            rRNAs                             :: 2, 5, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 2 (16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 124
            CDSs (without protein)            :: 124
            Pseudo Genes (ambiguous residues) :: 0 of 124
            Pseudo Genes (frameshifted)       :: 41 of 124
            Pseudo Genes (incomplete)         :: 84 of 124
            Pseudo Genes (internal stop)      :: 23 of 124
            Pseudo Genes (multiple problems)  :: 20 of 124
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2011423
                     /organism="Lactobacillus delbrueckii"
                     /mol_type="genomic DNA"
                     /strain="LDELB18P1"
                     /isolation_source="fresh parmesan cheese"
                     /db_xref="taxon:1584"
                     /geo_loc_name="Italy"
WGS         SETJ01000001-SETJ01000108
WGS_SCAFLD  NZ_SETJ01000001-NZ_SETJ01000108
//
LOCUS       NZ_JBXGGD010000000   3613880 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Lentibacillus daqui isolate OUG33, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGGD000000000
VERSION     NZ_JBXGGD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44800807
            Assembly: GCF_056854655.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Lentibacillus daqui (eye metagenome)
  ORGANISM  Lentibacillus daqui
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Lentibacillus.
REFERENCE   1  (bases 1 to 3613880)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Metagenome-assembled genomes from the bovine ocular surface
            microbiome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3613880)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGGD000000000.1.
            The Lentibacillus daqui whole genome shotgun (WGS) project has the
            project accession NZ_JBXGGD000000000.  This version of the project
            (01) has the accession number NZ_JBXGGD010000000, and consists of
            sequences JBXGGD010000001-JBXGGD010000096.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-FEB-2024
            Assembly Method        :: Megahit v. 1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 36.50123x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854655.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:28:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,606
            CDSs (total)                      :: 3,546
            Genes (coding)                    :: 3,439
            CDSs (with protein)               :: 3,439
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 1 (5S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 107
            CDSs (without protein)            :: 107
            Pseudo Genes (ambiguous residues) :: 0 of 107
            Pseudo Genes (frameshifted)       :: 49 of 107
            Pseudo Genes (incomplete)         :: 63 of 107
            Pseudo Genes (internal stop)      :: 17 of 107
            Pseudo Genes (multiple problems)  :: 20 of 107
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3613880
                     /organism="Lentibacillus daqui"
                     /mol_type="genomic DNA"
                     /isolate="OUG33"
                     /isolation_source="ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:2911514"
                     /environmental_sample
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.85 W"
                     /collection_date="2022"
                     /metagenome_source="eye metagenome"
                     /metagenomic
WGS         JBXGGD010000001-JBXGGD010000096
WGS_SCAFLD  NZ_JBXGGD010000001-NZ_JBXGGD010000096
//
LOCUS       NZ_LKGM01000000      3062121 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus paracasei strain FAM7821, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LKGM00000000
VERSION     NZ_LKGM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04088894
            Assembly: GCF_003713005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 3062121)
  AUTHORS   Wuthrich,D., Irmler,S., Berthoud,H., Guggenbuhl,B., Eugster,E. and
            Bruggmann,R.
  TITLE     Conversion of Methionine to Cysteine in Lactobacillus paracasei
            Depends on the Highly Mobile cysK-ctl-cysE Gene Cluster
  JOURNAL   Front Microbiol 9, 2415 (2018)
   PUBMED   30386310
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3062121)
  AUTHORS   Wuthrich,D., Irmler,S., Berthoud,H., Guggenbuhl,B., Eugster,E. and
            Bruggmann,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2015) University of Bern, Baltzerstrasse 6, Bern,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LKGM00000000.1.
            The Lacticaseibacillus paracasei whole genome shotgun (WGS) project
            has the project accession NZ_LKGM00000000.  This version of the
            project (01) has the accession number NZ_LKGM01000000, and consists
            of sequences LKGM01000001-LKGM01000062.
            Annotated using prokka 1.11 from http://www.vicbioinformatics.com.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SPAdes v. 3.0.0
            Genome Coverage       :: 1078x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003713005.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:17:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,023
            CDSs (total)                      :: 2,958
            Genes (coding)                    :: 2,846
            CDSs (with protein)               :: 2,846
            Genes (RNA)                       :: 65
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 1 (5S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 30 of 112
            Pseudo Genes (incomplete)         :: 74 of 112
            Pseudo Genes (internal stop)      :: 15 of 112
            Pseudo Genes (multiple problems)  :: 6 of 112
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3062121
                     /organism="Lacticaseibacillus paracasei"
                     /mol_type="genomic DNA"
                     /strain="FAM7821"
                     /isolation_source="semi-hard cheese"
                     /db_xref="taxon:1597"
                     /geo_loc_name="Switzerland"
WGS         LKGM01000001-LKGM01000062
WGS_SCAFLD  NZ_LKGM01000001-NZ_LKGM01000062
//
LOCUS       NZ_QWIW01000000      6208448 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella ornithinolytica strain QDRO2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QWIW00000000
VERSION     NZ_QWIW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09869688
            Assembly: GCF_003499235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella ornithinolytica (Raoultella ornithinolytica)
  ORGANISM  Klebsiella ornithinolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 6208448)
  AUTHORS   Wang,X., Wang,Y., Zhou,Y., Wang,Z., Zhang,S. and Shen,Z.
  TITLE     Emergence of colistin resistance gene mcr-8 in Raoultella
            ornithinolytica
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6208448)
  AUTHORS   Wang,X., Wang,Y., Zhou,Y., Wang,Z., Zhang,S. and Shen,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-AUG-2018) China Agricultural University, College of
            Veterinary Medicine, 2 Yuan Ming Yuan West Road, Beijing, Beijing
            100193, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QWIW00000000.1.
            The Klebsiella ornithinolytica whole genome shotgun (WGS) project
            has the project accession NZ_QWIW00000000.  This version of the
            project (01) has the accession number NZ_QWIW01000000, and consists
            of sequences QWIW01000001-QWIW01000060.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003499235.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:32:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,978
            CDSs (total)                      :: 5,907
            Genes (coding)                    :: 5,795
            CDSs (with protein)               :: 5,795
            Genes (RNA)                       :: 71
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 39 of 112
            Pseudo Genes (incomplete)         :: 78 of 112
            Pseudo Genes (internal stop)      :: 20 of 112
            Pseudo Genes (multiple problems)  :: 23 of 112
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6208448
                     /organism="Klebsiella ornithinolytica"
                     /mol_type="genomic DNA"
                     /strain="QDRO2"
                     /isolation_source="chicken cloaca"
                     /host="Gallus gallus"
                     /db_xref="taxon:54291"
                     /geo_loc_name="China"
                     /collection_date="2016-06-30"
                     /collected_by="China Agricultural University"
WGS         QWIW01000001-QWIW01000060
WGS_SCAFLD  NZ_QWIW01000001-NZ_QWIW01000060
//
LOCUS       NZ_WKOY01000000      3045693 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus rhamnosus strain BIOML-A6, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WKOY00000000
VERSION     NZ_WKOY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11946123
            Assembly: GCF_009679355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 3045693)
  AUTHORS   Poyet,M., Groussin,M., Gibbons,S.M., Avila-Pacheco,J., Jiang,X.,
            Kearney,S.M., Perrotta,A.R., Berdy,B., Zhao,S., Lieberman,T.D.,
            Swanson,P.K., Smith,M., Roesemann,S., Alexander,J.E., Rich,S.A.,
            Livny,J., Vlamakis,H., Clish,C., Bullock,K., Deik,A., Scott,J.,
            Pierce,K.A., Xavier,R.J. and Alm,E.J.
  TITLE     A library of human gut bacterial isolates paired with longitudinal
            multiomics data enables mechanistic microbiome research
  JOURNAL   Nat Med 25 (9), 1442-1452 (2019)
   PUBMED   31477907
REFERENCE   2  (bases 1 to 3045693)
  AUTHORS   Poyet,M., Groussin,M., Gibbons,S., Xavier,R. and Alm,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-NOV-2019) Biological Engineering, Massachusetts
            Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA
            02139, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WKOY00000000.1.
            The Lacticaseibacillus rhamnosus whole genome shotgun (WGS) project
            has the project accession NZ_WKOY00000000.  This version of the
            project (01) has the accession number NZ_WKOY01000000, and consists
            of sequences WKOY01000001-WKOY01000088.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 107.335x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009679355.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:34:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,870
            CDSs (total)                      :: 2,790
            Genes (coding)                    :: 2,730
            CDSs (with protein)               :: 2,730
            Genes (RNA)                       :: 80
            rRNAs                             :: 4, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 16 of 60
            Pseudo Genes (incomplete)         :: 37 of 60
            Pseudo Genes (internal stop)      :: 12 of 60
            Pseudo Genes (multiple problems)  :: 5 of 60
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3045693
                     /organism="Lacticaseibacillus rhamnosus"
                     /mol_type="genomic DNA"
                     /strain="BIOML-A6"
                     /isolation_source="fecal material [ENVO:00002003]"
                     /host="Homo sapiens"
                     /db_xref="taxon:47715"
                     /geo_loc_name="USA: Boston"
                     /lat_lon="42.36 N 71.06 W"
                     /collection_date="2015-12-09"
WGS         WKOY01000001-WKOY01000088
WGS_SCAFLD  NZ_WKOY01000001-NZ_WKOY01000088
//
LOCUS       NZ_JABAFK010000000   1929316 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lactobacillus crispatus strain WCA-383-APC-5E, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABAFK000000000
VERSION     NZ_JABAFK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14558270
            Assembly: GCF_012843585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactobacillus crispatus
  ORGANISM  Lactobacillus crispatus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (bases 1 to 1929316)
  AUTHORS   Hitch,T.C.A., Wylensek,D. and Clavel,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-APR-2020) Institute of Medical Microbiology,
            UniKlinik RWTH Aachen, Pauwelsstrasse, Aachen 52074, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABAFK000000000.1.
            The Lactobacillus crispatus whole genome shotgun (WGS) project has
            the project accession NZ_JABAFK000000000.  This version of the
            project (01) has the accession number NZ_JABAFK010000000, and
            consists of sequences JABAFK010000001-JABAFK010000054.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 680x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_012843585.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:39:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,941
            CDSs (total)                      :: 1,876
            Genes (coding)                    :: 1,811
            CDSs (with protein)               :: 1,811
            Genes (RNA)                       :: 65
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 30 of 65
            Pseudo Genes (incomplete)         :: 32 of 65
            Pseudo Genes (internal stop)      :: 21 of 65
            Pseudo Genes (multiple problems)  :: 16 of 65
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1929316
                     /organism="Lactobacillus crispatus"
                     /mol_type="genomic DNA"
                     /strain="WCA-383-APC-5E"
                     /isolation_source="feces"
                     /host="Sus scrofa domesticus"
                     /db_xref="taxon:47770"
                     /geo_loc_name="Germany"
                     /collection_date="2018-03-03"
WGS         JABAFK010000001-JABAFK010000054
WGS_SCAFLD  NZ_JABAFK010000001-NZ_JABAFK010000054
//
LOCUS       NZ_BNHN01000000      1980168 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lactobacillus delbrueckii subsp. allosunkii strain NRIC 0766, whole
            genome shotgun sequencing project.
ACCESSION   NZ_BNHN00000000
VERSION     NZ_BNHN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMD00244770
            Assembly: GCF_021601025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactobacillus delbrueckii subsp. allosunkii
  ORGANISM  Lactobacillus delbrueckii subsp. allosunkii
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1
  AUTHORS   Tsuchihashi,H., Ichikawa,A., Takeda,M., Koizumi,A., Mizoguchi,C.,
            Ishida,T. and Kimura,K.
  TITLE     Genetic diversity of Lactobacillus delbrueckii isolated from raw
            milk in Hokkaido, Japan
  JOURNAL   J Dairy Sci 105 (3), 2082-2093 (2022)
   PUBMED   34955279
  REMARK    DOI:10.3168/jds.2021-21135
REFERENCE   2  (bases 1 to 1980168)
  AUTHORS   Tsuchihashi,H., Ishida,T. and Kimura,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-OCT-2020) Contact:Hanae Tsuchihashi Meiji Co., Ltd.,
            Basic Microbiology Research Department, Food Microbiology Research
            Laboratories; 1-29-1 Nanakuni, Hachiouji, Tokyo 192-0919, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            BNHN00000000.1.
            The Lactobacillus delbrueckii subsp. allosunkii whole genome
            shotgun (WGS) project has the project accession NZ_BNHN00000000.
            This version of the project (01) has the accession number
            NZ_BNHN01000000, and consists of sequences
            BNHN01000001-BNHN01000094.
            Annotated at DFAST https://dfast.nig.ac.jp/
            
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.10
            Genome Coverage       :: 227x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021601025.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:06:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,047
            CDSs (total)                      :: 1,912
            Genes (coding)                    :: 1,831
            CDSs (with protein)               :: 1,831
            Genes (RNA)                       :: 135
            rRNAs                             :: 9, 14, 16 (5S, 16S, 23S)
            complete rRNAs                    :: 9 (5S)
            partial rRNAs                     :: 14, 16 (16S, 23S)
            tRNAs                             :: 93
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 21 of 81
            Pseudo Genes (incomplete)         :: 56 of 81
            Pseudo Genes (internal stop)      :: 15 of 81
            Pseudo Genes (multiple problems)  :: 10 of 81
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1980168
                     /organism="Lactobacillus delbrueckii subsp. allosunkii"
                     /mol_type="genomic DNA"
                     /strain="NRIC 0766"
                     /isolation_source="Japanese traditional pickle sunki"
                     /sub_species="allosunkii"
                     /culture_collection="NRIC:0766"
                     /db_xref="taxon:1050107"
                     /geo_loc_name="Japan"
WGS         BNHN01000001-BNHN01000094
WGS_SCAFLD  NZ_BNHN01000001-NZ_BNHN01000094
//
LOCUS       NZ_BNHO01000000      1986912 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lactobacillus delbrueckii subsp. allosunkii strain NRIC 0767, whole
            genome shotgun sequencing project.
ACCESSION   NZ_BNHO00000000
VERSION     NZ_BNHO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMD00244771
            Assembly: GCF_021600925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactobacillus delbrueckii subsp. allosunkii
  ORGANISM  Lactobacillus delbrueckii subsp. allosunkii
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1
  AUTHORS   Tsuchihashi,H., Ichikawa,A., Takeda,M., Koizumi,A., Mizoguchi,C.,
            Ishida,T. and Kimura,K.
  TITLE     Genetic diversity of Lactobacillus delbrueckii isolated from raw
            milk in Hokkaido, Japan
  JOURNAL   J Dairy Sci 105 (3), 2082-2093 (2022)
   PUBMED   34955279
  REMARK    DOI:10.3168/jds.2021-21135
REFERENCE   2  (bases 1 to 1986912)
  AUTHORS   Tsuchihashi,H., Ishida,T. and Kimura,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-OCT-2020) Contact:Hanae Tsuchihashi Meiji Co., Ltd.,
            Basic Microbiology Research Department, Food Microbiology Research
            Laboratories; 1-29-1 Nanakuni, Hachiouji, Tokyo 192-0919, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            BNHO00000000.1.
            The Lactobacillus delbrueckii subsp. allosunkii whole genome
            shotgun (WGS) project has the project accession NZ_BNHO00000000.
            This version of the project (01) has the accession number
            NZ_BNHO01000000, and consists of sequences
            BNHO01000001-BNHO01000183.
            Annotated at DFAST https://dfast.nig.ac.jp/
            
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.10
            Genome Coverage       :: 241x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021600925.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:09:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,115
            CDSs (total)                      :: 1,995
            Genes (coding)                    :: 1,875
            CDSs (with protein)               :: 1,875
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 14, 17 (5S, 16S, 23S)
            complete rRNAs                    :: 8 (5S)
            partial rRNAs                     :: 14, 17 (16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 120
            CDSs (without protein)            :: 120
            Pseudo Genes (ambiguous residues) :: 0 of 120
            Pseudo Genes (frameshifted)       :: 23 of 120
            Pseudo Genes (incomplete)         :: 94 of 120
            Pseudo Genes (internal stop)      :: 18 of 120
            Pseudo Genes (multiple problems)  :: 14 of 120
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1986912
                     /organism="Lactobacillus delbrueckii subsp. allosunkii"
                     /mol_type="genomic DNA"
                     /strain="NRIC 0767"
                     /isolation_source="Japanese traditional pickle sunki"
                     /sub_species="allosunkii"
                     /culture_collection="NRIC:0767"
                     /db_xref="taxon:1050107"
                     /geo_loc_name="Japan"
WGS         BNHO01000001-BNHO01000183
WGS_SCAFLD  NZ_BNHO01000001-NZ_BNHO01000183
//
LOCUS       NZ_JAJBZL020000000   2880392 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus rhamnosus strain IMI 507023, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JAJBZL000000000
VERSION     NZ_JAJBZL000000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN22314508
            Assembly: GCF_020844065.2
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 2880392)
  AUTHORS   Moran,C. and Nikodinoska,I.
  TITLE     Lacticaseibacillus rhamnosus IMI 507023
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2880392)
  AUTHORS   Moran,C. and Nikodinoska,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-FEB-2022) Regulatory Affairs, ALLTECH SARL, ZA La
            Papillonniere, Rue Charles Amand, Vire 14500, France
REFERENCE   3  (bases 1 to 2880392)
  AUTHORS   Moran,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-OCT-2021) Regulatory Affairs, Alltech SARL, ZA La
            Papillonniere, Rue Charles Amand, Vire 14500, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJBZL000000000.2.
            
            On Feb 17, 2022 this sequence version replaced
            NZ_JAJBZL000000000.1.
            The Lacticaseibacillus rhamnosus whole genome shotgun (WGS) project
            has the project accession NZ_JAJBZL000000000.  This version of the
            project (02) has the accession number NZ_JAJBZL020000000, and
            consists of sequences JAJBZL020000001-JAJBZL020000039.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v 0.4.8.
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 608.0x
            Sequencing Technology  :: Illumina NovaSeq 6000 technology
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_020844065.2-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:20:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,652
            CDSs (total)                      :: 2,599
            Genes (coding)                    :: 2,560
            CDSs (with protein)               :: 2,560
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 16 of 39
            Pseudo Genes (incomplete)         :: 16 of 39
            Pseudo Genes (internal stop)      :: 12 of 39
            Pseudo Genes (multiple problems)  :: 5 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2880392
                     /organism="Lacticaseibacillus rhamnosus"
                     /mol_type="genomic DNA"
                     /strain="IMI 507023"
                     /isolation_source="Corn silage"
                     /db_xref="taxon:47715"
                     /geo_loc_name="USA: Kentucky"
                     /collection_date="2013-03-31"
WGS         JAJBZL020000001-JAJBZL020000039
WGS_SCAFLD  NZ_JAJBZL020000001-NZ_JAJBZL020000039
//
LOCUS       NZ_VNTQ01000000      5891586 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella oxytoca strain 700765-17, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VNTQ00000000
VERSION     NZ_VNTQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12212256
            Assembly: GCF_020117275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella oxytoca
  ORGANISM  Klebsiella oxytoca
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 5891586)
  AUTHORS   Cuenod,A., Wuthrich,D., Seth-Smith,H.M.B., Ott,C., Gehringer,C.,
            Foucault,F., Mouchet,R., Kassim,A., Revathi,G., Vogt,D.R., von
            Felten,S., Bassetti,S., Tschudin-Sutter,S., Hettich,T.,
            Schlotterbeck,G., Homberger,C., Casanova,C., Moran-Gilad,J.,
            Sagi,O., Rodriguez-Sanchez,B., Muller,F., Aerni,M., Gaia,V., van
            Dessel,H., Kampinga,G.A., Muller,C., Daubenberger,C., Pfluger,V.
            and Egli,A.
  TITLE     Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal
            importance of Klebsiella oxytoca group in invasive infections: a
            retrospective clinical study
  JOURNAL   Genome Med 13 (1), 150 (2021)
   PUBMED   34517886
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5891586)
  AUTHORS   Cuenod,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2019) Department of Biomedicine, University of
            Basel, Hebelstrasse 20, Basel, BS 4051, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VNTQ00000000.1.
            The Klebsiella oxytoca whole genome shotgun (WGS) project has the
            project accession NZ_VNTQ00000000.  This version of the project
            (01) has the accession number NZ_VNTQ01000000, and consists of
            sequences VNTQ01000001-VNTQ01000118.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 60x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_020117275.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:25:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,617
            CDSs (total)                      :: 5,529
            Genes (coding)                    :: 5,417
            CDSs (with protein)               :: 5,417
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 48 of 112
            Pseudo Genes (incomplete)         :: 71 of 112
            Pseudo Genes (internal stop)      :: 15 of 112
            Pseudo Genes (multiple problems)  :: 20 of 112
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5891586
                     /organism="Klebsiella oxytoca"
                     /mol_type="genomic DNA"
                     /strain="700765-17"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:571"
                     /geo_loc_name="Switzerland"
                     /lat_lon="47.562446 N 7.583217 E"
                     /collection_date="2017"
WGS         VNTQ01000001-VNTQ01000118
WGS_SCAFLD  NZ_VNTQ01000001-NZ_VNTQ01000118
//
LOCUS       NZ_JARJMN010000000   1925484 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lactobacillus delbrueckii strain Mehedi L4, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JARJMN000000000
VERSION     NZ_JARJMN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN33771130
            Assembly: GCF_029334925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactobacillus delbrueckii
  ORGANISM  Lactobacillus delbrueckii
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (bases 1 to 1925484)
  AUTHORS   Fazal,M.A., Rana,E.A., Mazumder,R., Islam,M.Z. and Ahad,A.
  TITLE     Genome Sequence of Lactobacillus delbrueckii Strain MehediL4, a
            Probiotic Bacterium Isolated from Yogurt
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1925484)
  AUTHORS   Fazal,M.A., Rana,E.A., Mazumder,R., Islam,M.Z. and Ahad,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-MAR-2023) Department of Microbiology and veterinary
            Public Health, Chattogram Veterinary and Animal Sciences
            University, Zakir Hossain Road, Khulshi-4225, Bangladesh,
            Chattogram 4225, Bangladesh
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARJMN000000000.1.
            The Lactobacillus delbrueckii whole genome shotgun (WGS) project
            has the project accession NZ_JARJMN000000000.  This version of the
            project (01) has the accession number NZ_JARJMN010000000, and
            consists of sequences JARJMN010000001-JARJMN010000094.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Eaftekhar Ahmed Rana.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2022
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 145.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029334925.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:36:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,038
            CDSs (total)                      :: 1,952
            Genes (coding)                    :: 1,818
            CDSs (with protein)               :: 1,818
            Genes (RNA)                       :: 86
            rRNAs                             :: 7, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 73
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 134
            CDSs (without protein)            :: 134
            Pseudo Genes (ambiguous residues) :: 0 of 134
            Pseudo Genes (frameshifted)       :: 50 of 134
            Pseudo Genes (incomplete)         :: 86 of 134
            Pseudo Genes (internal stop)      :: 29 of 134
            Pseudo Genes (multiple problems)  :: 29 of 134
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1925484
                     /organism="Lactobacillus delbrueckii"
                     /mol_type="genomic DNA"
                     /strain="Mehedi L4"
                     /isolation_source="yogurt"
                     /db_xref="taxon:1584"
                     /geo_loc_name="Bangladesh"
                     /collection_date="2021-10-12"
                     /collected_by="Eaftekhar Ahmed Rana"
                     /identified_by="Eaftekhar Ahmed Rana"
WGS         JARJMN010000001-JARJMN010000094
WGS_SCAFLD  NZ_JARJMN010000001-NZ_JARJMN010000094
//
LOCUS       NZ_VNUS01000000      6018371 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella oxytoca strain 711080-17, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VNUS00000000
VERSION     NZ_VNUS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12212284
            Assembly: GCF_020116675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella oxytoca
  ORGANISM  Klebsiella oxytoca
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 6018371)
  AUTHORS   Cuenod,A., Wuthrich,D., Seth-Smith,H.M.B., Ott,C., Gehringer,C.,
            Foucault,F., Mouchet,R., Kassim,A., Revathi,G., Vogt,D.R., von
            Felten,S., Bassetti,S., Tschudin-Sutter,S., Hettich,T.,
            Schlotterbeck,G., Homberger,C., Casanova,C., Moran-Gilad,J.,
            Sagi,O., Rodriguez-Sanchez,B., Muller,F., Aerni,M., Gaia,V., van
            Dessel,H., Kampinga,G.A., Muller,C., Daubenberger,C., Pfluger,V.
            and Egli,A.
  TITLE     Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal
            importance of Klebsiella oxytoca group in invasive infections: a
            retrospective clinical study
  JOURNAL   Genome Med 13 (1), 150 (2021)
   PUBMED   34517886
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6018371)
  AUTHORS   Cuenod,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2019) Department of Biomedicine, University of
            Basel, Hebelstrasse 20, Basel, BS 4051, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VNUS00000000.1.
            The Klebsiella oxytoca whole genome shotgun (WGS) project has the
            project accession NZ_VNUS00000000.  This version of the project
            (01) has the accession number NZ_VNUS01000000, and consists of
            sequences VNUS01000001-VNUS01000125.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 60x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_020116675.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:33:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,768
            CDSs (total)                      :: 5,677
            Genes (coding)                    :: 5,567
            CDSs (with protein)               :: 5,567
            Genes (RNA)                       :: 91
            rRNAs                             :: 1, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 110
            CDSs (without protein)            :: 110
            Pseudo Genes (ambiguous residues) :: 0 of 110
            Pseudo Genes (frameshifted)       :: 52 of 110
            Pseudo Genes (incomplete)         :: 79 of 110
            Pseudo Genes (internal stop)      :: 12 of 110
            Pseudo Genes (multiple problems)  :: 30 of 110
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6018371
                     /organism="Klebsiella oxytoca"
                     /mol_type="genomic DNA"
                     /strain="711080-17"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:571"
                     /geo_loc_name="Switzerland"
                     /lat_lon="47.562446 N 7.583217 E"
                     /collection_date="2017"
WGS         VNUS01000001-VNUS01000125
WGS_SCAFLD  NZ_VNUS01000001-NZ_VNUS01000125
//
LOCUS       NZ_VNQQ01000000      5853413 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella oxytoca strain 404821-16, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VNQQ00000000
VERSION     NZ_VNQQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12212202
            Assembly: GCF_020119115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella oxytoca
  ORGANISM  Klebsiella oxytoca
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 5853413)
  AUTHORS   Cuenod,A., Wuthrich,D., Seth-Smith,H.M.B., Ott,C., Gehringer,C.,
            Foucault,F., Mouchet,R., Kassim,A., Revathi,G., Vogt,D.R., von
            Felten,S., Bassetti,S., Tschudin-Sutter,S., Hettich,T.,
            Schlotterbeck,G., Homberger,C., Casanova,C., Moran-Gilad,J.,
            Sagi,O., Rodriguez-Sanchez,B., Muller,F., Aerni,M., Gaia,V., van
            Dessel,H., Kampinga,G.A., Muller,C., Daubenberger,C., Pfluger,V.
            and Egli,A.
  TITLE     Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal
            importance of Klebsiella oxytoca group in invasive infections: a
            retrospective clinical study
  JOURNAL   Genome Med 13 (1), 150 (2021)
   PUBMED   34517886
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5853413)
  AUTHORS   Cuenod,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-JUL-2019) Department of Biomedicine, University of
            Basel, Hebelstrasse 20, Basel, BS 4051, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VNQQ00000000.1.
            The Klebsiella oxytoca whole genome shotgun (WGS) project has the
            project accession NZ_VNQQ00000000.  This version of the project
            (01) has the accession number NZ_VNQQ01000000, and consists of
            sequences VNQQ01000001-VNQQ01000172.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 60x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_020119115.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:43:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,550
            CDSs (total)                      :: 5,464
            Genes (coding)                    :: 5,355
            CDSs (with protein)               :: 5,355
            Genes (RNA)                       :: 86
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 77
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 80 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 28 of 109
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5853413
                     /organism="Klebsiella oxytoca"
                     /mol_type="genomic DNA"
                     /strain="404821-16"
                     /isolation_source="Superficial Swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:571"
                     /geo_loc_name="Switzerland"
                     /lat_lon="47.562446 N 7.583217 E"
                     /collection_date="2016"
WGS         VNQQ01000001-VNQQ01000172
WGS_SCAFLD  NZ_VNQQ01000001-NZ_VNQQ01000172
//
LOCUS       NZ_JAPXHM010000000   3076156 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus paracasei strain J3703, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAPXHM000000000
VERSION     NZ_JAPXHM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32299550
            Assembly: GCF_029813065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 3076156)
  AUTHORS   Li,H.
  TITLE     Lactic acid bacteria metabolizing allure red and their comparative
            genomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3076156)
  AUTHORS   Li,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-DEC-2022) Faculty of Food Science and Engineering,
            Kunming University of Science and Technology, No. 727, Jingming
            South Road, Kunming 650500, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAPXHM000000000.1.
            The Lacticaseibacillus paracasei whole genome shotgun (WGS) project
            has the project accession NZ_JAPXHM000000000.  This version of the
            project (01) has the accession number NZ_JAPXHM010000000, and
            consists of sequences JAPXHM010000001-JAPXHM010000129.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12.0x
            Sequencing Technology  :: Illumina HiSeq2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029813065.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:55:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,025
            CDSs (total)                      :: 2,972
            Genes (coding)                    :: 2,860
            CDSs (with protein)               :: 2,860
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 40 of 112
            Pseudo Genes (incomplete)         :: 66 of 112
            Pseudo Genes (internal stop)      :: 17 of 112
            Pseudo Genes (multiple problems)  :: 10 of 112
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3076156
                     /organism="Lacticaseibacillus paracasei"
                     /mol_type="genomic DNA"
                     /strain="J3703"
                     /isolation_source="paojiao"
                     /db_xref="taxon:1597"
                     /geo_loc_name="China: yunnan"
                     /collection_date="2021-09-01"
WGS         JAPXHM010000001-JAPXHM010000129
WGS_SCAFLD  NZ_JAPXHM010000001-NZ_JAPXHM010000129
//
LOCUS       NZ_JBBMOO010000000   1895177 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lactobacillus delbrueckii strain ATA-LTC-Ld090812, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBBMOO000000000
VERSION     NZ_JBBMOO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40643423
            Assembly: GCF_038024995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactobacillus delbrueckii
  ORGANISM  Lactobacillus delbrueckii
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (bases 1 to 1895177)
  AUTHORS   Tarhan Celebi,L.
  TITLE     Whole genome sequencing of microorganisms collected by LTC
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1895177)
  AUTHORS   Tarhan Celebi,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-MAR-2024) Medical Microbiology, ATA BIO TEKNOLOJI
            ILAC SANAYI VE TICARET LTD. STI, Ahmet Yesevi, Kerem Sk. No:9,
            Istanbul 34903, Turkey
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBMOO000000000.1.
            The Lactobacillus delbrueckii whole genome shotgun (WGS) project
            has the project accession NZ_JBBMOO000000000.  This version of the
            project (01) has the accession number NZ_JBBMOO010000000, and
            consists of sequences JBBMOO010000001-JBBMOO010000694.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 158,17x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038024995.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:06:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,331
            CDSs (total)                      :: 2,243
            Genes (coding)                    :: 1,939
            CDSs (with protein)               :: 1,939
            Genes (RNA)                       :: 88
            rRNAs                             :: 2, 3, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 6 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 304
            CDSs (without protein)            :: 304
            Pseudo Genes (ambiguous residues) :: 0 of 304
            Pseudo Genes (frameshifted)       :: 78 of 304
            Pseudo Genes (incomplete)         :: 239 of 304
            Pseudo Genes (internal stop)      :: 37 of 304
            Pseudo Genes (multiple problems)  :: 45 of 304
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1895177
                     /organism="Lactobacillus delbrueckii"
                     /mol_type="genomic DNA"
                     /strain="ATA-LTC-Ld090812"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:1584"
                     /geo_loc_name="Turkey: Istanbul"
                     /collection_date="2012-08-09"
                     /collected_by="Leyla Tarhan Celebi"
WGS         JBBMOO010000001-JBBMOO010000694
WGS_SCAFLD  NZ_JBBMOO010000001-NZ_JBBMOO010000694
//
LOCUS       NZ_JALKYL010000000   5373199 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella quasipneumoniae strain JS-75, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JALKYL000000000
VERSION     NZ_JALKYL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN26241673
            Assembly: GCF_029525915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5373199)
  AUTHORS   Zhou,J.
  TITLE     Molecular characteristic of Klebsiella spp. causing invasive
            infection in hospital patients in China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5373199)
  AUTHORS   Li,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-FEB-2022) State Key Laboratory of Infectious Disease
            Prevention and Control, Institute for Communicable Disease Control
            and Prevention, Chinese Center for Disease Control and Pr, Changbai
            road 155, Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALKYL000000000.1.
            The Klebsiella quasipneumoniae whole genome shotgun (WGS) project
            has the project accession NZ_JALKYL000000000.  This version of the
            project (01) has the accession number NZ_JALKYL010000000, and
            consists of sequences JALKYL010000001-JALKYL010000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029525915.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:02:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,253
            CDSs (total)                      :: 5,151
            Genes (coding)                    :: 5,037
            CDSs (with protein)               :: 5,037
            Genes (RNA)                       :: 102
            rRNAs                             :: 9, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 76
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 114
            CDSs (without protein)            :: 114
            Pseudo Genes (ambiguous residues) :: 0 of 114
            Pseudo Genes (frameshifted)       :: 50 of 114
            Pseudo Genes (incomplete)         :: 66 of 114
            Pseudo Genes (internal stop)      :: 28 of 114
            Pseudo Genes (multiple problems)  :: 26 of 114
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5373199
                     /organism="Klebsiella quasipneumoniae"
                     /mol_type="genomic DNA"
                     /strain="JS-75"
                     /isolation_source="bile"
                     /host="Homo sapiens"
                     /db_xref="taxon:1463165"
                     /geo_loc_name="China: JiangSu"
                     /collection_date="2019"
                     /collected_by="Institute for Communicable Disease Control
                     and Prevention, Chinese Center for Disease Control and
                     Prevention"
WGS         JALKYL010000001-JALKYL010000026
WGS_SCAFLD  NZ_JALKYL010000001-NZ_JALKYL010000026
//
LOCUS       NZ_JAPUBZ010000000   5343127 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella ornithinolytica strain nibro01, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAPUBZ000000000
VERSION     NZ_JAPUBZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32147468
            Assembly: GCF_029043495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella ornithinolytica (Raoultella ornithinolytica)
  ORGANISM  Klebsiella ornithinolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 5343127)
  AUTHORS   Alam,J., Hossain,M.M.K., Hossain,M.S., Ahmed,S., Ehsan,M.A.,
            Rubaya,R. and Bhuyan,A.A.
  TITLE     Isolation from Pet Cat and Genome Sequence of a Bangladeshi Strain
            of Raoultella ornithinolytica with Metal and Antimicrobial
            Resistance Genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5343127)
  AUTHORS   Alam,J., Hossain,M.M.K., Hossain,M.S., Ahmed,S., Ehsan,M.A.,
            Rubaya,R. and Bhuyan,A.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2022) Animal Biotechnology Division, National
            Institute of Biotechnology, Ganakbari, Savar Dhaka-1349, Bangladesh
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAPUBZ000000000.1.
            The Klebsiella ornithinolytica whole genome shotgun (WGS) project
            has the project accession NZ_JAPUBZ000000000.  This version of the
            project (01) has the accession number NZ_JAPUBZ010000000, and
            consists of sequences JAPUBZ010000001-JAPUBZ010000214.
            Bacteria and source DNA available from National Institute of
            Biotechnology, Dhaka, Bangladesh.
            The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: GS De Novo Assembler v. 2.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30.0x
            Sequencing Technology  :: Illumina MiniSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029043495.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:58:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,103
            CDSs (total)                      :: 5,037
            Genes (coding)                    :: 4,948
            CDSs (with protein)               :: 4,948
            Genes (RNA)                       :: 66
            rRNAs                             :: 3, 4 (16S, 23S)
            partial rRNAs                     :: 3, 4 (16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 89
            CDSs (without protein)            :: 89
            Pseudo Genes (ambiguous residues) :: 0 of 89
            Pseudo Genes (frameshifted)       :: 22 of 89
            Pseudo Genes (incomplete)         :: 77 of 89
            Pseudo Genes (internal stop)      :: 6 of 89
            Pseudo Genes (multiple problems)  :: 15 of 89
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5343127
                     /organism="Klebsiella ornithinolytica"
                     /mol_type="genomic DNA"
                     /strain="nibro01"
                     /isolation_source="Oral swab"
                     /host="Cat"
                     /db_xref="taxon:54291"
                     /geo_loc_name="Bangladesh:Dhaka"
                     /collection_date="2021-01-30"
WGS         JAPUBZ010000001-JAPUBZ010000214
WGS_SCAFLD  NZ_JAPUBZ010000001-NZ_JAPUBZ010000214
//
LOCUS       NZ_JBBOJN010000000   2004684 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lactobacillus crispatus strain LMG 12003, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBOJN000000000
VERSION     NZ_JBBOJN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN33861689
            Assembly: GCF_038001405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactobacillus crispatus
  ORGANISM  Lactobacillus crispatus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (bases 1 to 2004684)
  AUTHORS   Tarracchini,C., Argentini,C., Alessandri,G., Lugli,G.A.,
            Mancabelli,L., Fontana,F., Anzalone,R., Viappiani,A., Turroni,F.,
            Ventura,M. and Milani,C.
  TITLE     The core genome evolution of Lactobacillus crispatus as a driving
            force for niche competition in the human vaginal tract
  JOURNAL   Microb Biotechnol 16 (9), 1774-1789 (2023)
   PUBMED   37491806
REFERENCE   2  (bases 1 to 2004684)
  AUTHORS   Tarracchini,C., Argentini,C., Alessandri,G., Lugli,G.A.,
            Mancabelli,L., Fontana,F., Anzalone,R., Viappiani,A., Turroni,F.,
            Ventura,M. and Milani,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAR-2023) Department of Chemistry, Life Sciences and
            Environmental Sustainability, University of Parma, Via Parco Area
            delle Scienze 11/A, Parma, Parma 43124, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBOJN000000000.1.
            The Lactobacillus crispatus whole genome shotgun (WGS) project has
            the project accession NZ_JBBOJN000000000.  This version of the
            project (01) has the accession number NZ_JBBOJN010000000, and
            consists of sequences JBBOJN010000001-JBBOJN010000101.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 238x
            Sequencing Technology  :: Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038001405.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:04:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 1,974
            Genes (coding)                    :: 1,853
            CDSs (with protein)               :: 1,853
            Genes (RNA)                       :: 67
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 59
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 121
            Pseudo Genes (ambiguous residues) :: 0 of 121
            Pseudo Genes (frameshifted)       :: 41 of 121
            Pseudo Genes (incomplete)         :: 72 of 121
            Pseudo Genes (internal stop)      :: 24 of 121
            Pseudo Genes (multiple problems)  :: 15 of 121
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2004684
                     /organism="Lactobacillus crispatus"
                     /mol_type="genomic DNA"
                     /strain="LMG 12003"
                     /isolation_source="infant fecal"
                     /host="Homo sapiens"
                     /culture_collection="LMG:12003"
                     /db_xref="taxon:47770"
                     /geo_loc_name="Italy"
WGS         JBBOJN010000001-JBBOJN010000101
WGS_SCAFLD  NZ_JBBOJN010000001-NZ_JBBOJN010000101
//
LOCUS       NZ_JBBMOP010000000   2880493 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus rhamnosus strain ATA-LTC-Lrs010902, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBBMOP000000000
VERSION     NZ_JBBMOP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40643422
            Assembly: GCF_037966675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 2880493)
  AUTHORS   Tarhan Celebi,L.
  TITLE     Whole genome sequencing of microorganisms collected by LTC
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2880493)
  AUTHORS   Tarhan Celebi,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-MAR-2024) Medical Microbiology, ATA BIO TEKNOLOJI
            ILAC SANAYI VE TICARET LTD. STI, Ahmet Yesevi, Kerem Sk. No:9,
            Istanbul 34903, Turkey
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBMOP000000000.1.
            The Lacticaseibacillus rhamnosus whole genome shotgun (WGS) project
            has the project accession NZ_JBBMOP000000000.  This version of the
            project (01) has the accession number NZ_JBBMOP010000000, and
            consists of sequences JBBMOP010000001-JBBMOP010000098.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 122,73x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037966675.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:05:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,661
            Genes (coding)                    :: 2,596
            CDSs (with protein)               :: 2,596
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 3 (16S)
            tRNAs                             :: 56
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 21 of 65
            Pseudo Genes (incomplete)         :: 41 of 65
            Pseudo Genes (internal stop)      :: 7 of 65
            Pseudo Genes (multiple problems)  :: 2 of 65
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2880493
                     /organism="Lacticaseibacillus rhamnosus"
                     /mol_type="genomic DNA"
                     /strain="ATA-LTC-Lrs010902"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:47715"
                     /geo_loc_name="Turkey: Izmir"
                     /collection_date="2002-09-01"
                     /collected_by="Leyla Tarhan Celebi"
WGS         JBBMOP010000001-JBBMOP010000098
WGS_SCAFLD  NZ_JBBMOP010000001-NZ_JBBMOP010000098
//
LOCUS       NZ_JASOLX010000000   3029986 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Lacticaseibacillus paracasei strain UMB7433B, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JASOLX000000000
VERSION     NZ_JASOLX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34998777
            Assembly: GCF_030215365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 3029986)
  AUTHORS   Du,J.
  TITLE     Cataloging the Phylogenetic Diversity of Human Bladder Bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3029986)
  AUTHORS   Du,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAY-2023) LUMC, Loyola University Chicago, S 1st
            avenue, Chicago, IL 60153, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JASOLX000000000.1.
            The Lacticaseibacillus paracasei whole genome shotgun (WGS) project
            has the project accession NZ_JASOLX000000000.  This version of the
            project (01) has the accession number NZ_JASOLX010000000, and
            consists of sequences JASOLX010000001-JASOLX010000111.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 229.969x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_030215365.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:04:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,991
            CDSs (total)                      :: 2,926
            Genes (coding)                    :: 2,816
            CDSs (with protein)               :: 2,816
            Genes (RNA)                       :: 65
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 110
            CDSs (without protein)            :: 110
            Pseudo Genes (ambiguous residues) :: 0 of 110
            Pseudo Genes (frameshifted)       :: 39 of 110
            Pseudo Genes (incomplete)         :: 62 of 110
            Pseudo Genes (internal stop)      :: 19 of 110
            Pseudo Genes (multiple problems)  :: 9 of 110
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3029986
                     /organism="Lacticaseibacillus paracasei"
                     /mol_type="genomic DNA"
                     /strain="UMB7433B"
                     /isolation_source="Urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:1597"
                     /geo_loc_name="USA: Maywood, IL"
                     /lat_lon="41.85911095 N 87.83527146 W"
WGS         JASOLX010000001-JASOLX010000111
WGS_SCAFLD  NZ_JASOLX010000001-NZ_JASOLX010000111
//
LOCUS       NZ_JALKWX010000000   5667344 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella variicola strain SC-SY11, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JALKWX000000000
VERSION     NZ_JALKWX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN26241713
            Assembly: GCF_029523535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella variicola
  ORGANISM  Klebsiella variicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5667344)
  AUTHORS   Zhou,J.
  TITLE     Molecular characteristic of Klebsiella spp. causing invasive
            infection in hospital patients in China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5667344)
  AUTHORS   Li,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-FEB-2022) State Key Laboratory of Infectious Disease
            Prevention and Control, Institute for Communicable Disease Control
            and Prevention, Chinese Center for Disease Control and Pr, Changbai
            road 155, Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALKWX000000000.1.
            The Klebsiella variicola whole genome shotgun (WGS) project has the
            project accession NZ_JALKWX000000000.  This version of the project
            (01) has the accession number NZ_JALKWX010000000, and consists of
            sequences JALKWX010000001-JALKWX010000028.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029523535.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:07:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,548
            CDSs (total)                      :: 5,445
            Genes (coding)                    :: 5,324
            CDSs (with protein)               :: 5,324
            Genes (RNA)                       :: 103
            rRNAs                             :: 7, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 77
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 121
            Pseudo Genes (ambiguous residues) :: 0 of 121
            Pseudo Genes (frameshifted)       :: 50 of 121
            Pseudo Genes (incomplete)         :: 65 of 121
            Pseudo Genes (internal stop)      :: 25 of 121
            Pseudo Genes (multiple problems)  :: 16 of 121
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5667344
                     /organism="Klebsiella variicola"
                     /mol_type="genomic DNA"
                     /strain="SC-SY11"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:244366"
                     /geo_loc_name="China: SiChuan"
                     /collection_date="2018"
                     /collected_by="Institute for Communicable Disease Control
                     and Prevention, Chinese Center for Disease Control and
                     Prevention"
WGS         JALKWX010000001-JALKWX010000028
WGS_SCAFLD  NZ_JALKWX010000001-NZ_JALKWX010000028
//
LOCUS       NZ_JBBNTV010000000   5439676 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Klebsiella quasipneumoniae strain S2023221, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBNTV000000000
VERSION     NZ_JBBNTV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40181864
            Assembly: GCF_038375065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5439676)
  AUTHORS   Yan,W.
  TITLE     Etiologic characteristic of hypervirulent Klebsiella pneumoniae
            based on whole genome sequencing analysis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5439676)
  AUTHORS   Yan,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-FEB-2024) Microbiological laboratory, Huzhou CDC, 999
            Changxing Road, Huzhou, Zhejiang 313000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBNTV000000000.1.
            The Klebsiella quasipneumoniae whole genome shotgun (WGS) project
            has the project accession NZ_JBBNTV000000000.  This version of the
            project (01) has the accession number NZ_JBBNTV010000000, and
            consists of sequences JBBNTV010000001-JBBNTV010000024.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038375065.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,303
            CDSs (total)                      :: 5,204
            Genes (coding)                    :: 5,080
            CDSs (with protein)               :: 5,080
            Genes (RNA)                       :: 99
            rRNAs                             :: 6, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 124
            CDSs (without protein)            :: 124
            Pseudo Genes (ambiguous residues) :: 0 of 124
            Pseudo Genes (frameshifted)       :: 50 of 124
            Pseudo Genes (incomplete)         :: 76 of 124
            Pseudo Genes (internal stop)      :: 26 of 124
            Pseudo Genes (multiple problems)  :: 26 of 124
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5439676
                     /organism="Klebsiella quasipneumoniae"
                     /mol_type="genomic DNA"
                     /strain="S2023221"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:1463165"
                     /geo_loc_name="China: Huzhou"
                     /lat_lon="30.58 N 119.63 E"
                     /collection_date="2023"
                     /collected_by="Huzhou CDC"
WGS         JBBNTV010000001-JBBNTV010000024
WGS_SCAFLD  NZ_JBBNTV010000001-NZ_JBBNTV010000024
//
LOCUS       NZ_CBBCIG010000000   3317974 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Mycobacterium sp. isolate
            PELAGICS-MAG-m2-bin114782-NMUSM-SM-24may22., whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBBCIG000000000
VERSION     NZ_CBBCIG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117455210
            Assembly: GCF_964852295.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Mycobacterium sp. (freshwater metagenome)
  ORGANISM  Mycobacterium sp.
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (bases 1 to 3317974)
  AUTHORS   Wong,H., Bulzu,P., Layoun,P., Shabarova,T., Chiriac,C., Salcher,M.,
            Ghai,R. and Kavagutti S,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-JAN-2025) BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF
            HYDROBIO, Laboratory of Microbial Ecology and Evolution, Na Sadkach
            7, Ceske Budejovice, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBBCIG000000000.1.
            The Mycobacterium sp. whole genome shotgun (WGS) project has the
            project accession NZ_CBBCIG000000000.  This version of the project
            (01) has the accession number NZ_CBBCIG010000000, and consists of
            sequences CBBCIG010000001-CBBCIG010000154.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964852295.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 01:27:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,314
            CDSs (total)                      :: 3,265
            Genes (coding)                    :: 3,158
            CDSs (with protein)               :: 3,158
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 42
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 107
            CDSs (without protein)            :: 107
            Pseudo Genes (ambiguous residues) :: 0 of 107
            Pseudo Genes (frameshifted)       :: 11 of 107
            Pseudo Genes (incomplete)         :: 97 of 107
            Pseudo Genes (internal stop)      :: 2 of 107
            Pseudo Genes (multiple problems)  :: 3 of 107
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3317974
                     /organism="Mycobacterium sp."
                     /mol_type="genomic DNA"
                     /isolate="PELAGICS-MAG-m2-bin114782-NMUSM-SM-24may22."
                     /isolation_source="Nohipalu Mustjarv lake"
                     /db_xref="taxon:1785"
                     /environmental_sample
                     /geo_loc_name="Estonia"
                     /collection_date="2022-05-24"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CBBCIG010000001-CBBCIG010000154
WGS_SCAFLD  NZ_CBBCIG010000001-NZ_CBBCIG010000154
//
LOCUS       NZ_CDTDPM010000000   3430717 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Microbacterium luteum isolate MarMAG_032006, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDTDPM000000000
VERSION     NZ_CDTDPM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120696227
            Assembly: GCF_977306245.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Microbacterium luteum (marine metagenome)
  ORGANISM  Microbacterium luteum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (bases 1 to 3430717)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDTDPM000000000.1.
            The Microbacterium luteum whole genome shotgun (WGS) project has
            the project accession NZ_CDTDPM000000000.  This version of the
            project (01) has the accession number NZ_CDTDPM010000000, and
            consists of sequences CDTDPM010000001-CDTDPM010000330.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977306245.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 01:33:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,484
            CDSs (total)                      :: 3,438
            Genes (coding)                    :: 3,319
            CDSs (with protein)               :: 3,319
            Genes (RNA)                       :: 46
            tRNAs                             :: 43
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 7 of 119
            Pseudo Genes (incomplete)         :: 110 of 119
            Pseudo Genes (internal stop)      :: 4 of 119
            Pseudo Genes (multiple problems)  :: 2 of 119
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3430717
                     /organism="Microbacterium luteum"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_032006"
                     /db_xref="taxon:2782167"
                     /environmental_sample
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDTDPM010000001-CDTDPM010000330
WGS_SCAFLD  NZ_CDTDPM010000001-NZ_CDTDPM010000330
//
LOCUS       NZ_CDTHNC010000000   3945972 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Marinobacter nauticus isolate MarMAG_072651, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDTHNC000000000
VERSION     NZ_CDTHNC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120696915
            Assembly: GCF_977332655.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Marinobacter nauticus (marine metagenome)
  ORGANISM  Marinobacter nauticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 3945972)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDTHNC000000000.1.
            The Marinobacter nauticus whole genome shotgun (WGS) project has
            the project accession NZ_CDTHNC000000000.  This version of the
            project (01) has the accession number NZ_CDTHNC010000000, and
            consists of sequences CDTHNC010000001-CDTHNC010000073.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977332655.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 01:27:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,635
            CDSs (total)                      :: 3,591
            Genes (coding)                    :: 3,551
            CDSs (with protein)               :: 3,551
            Genes (RNA)                       :: 44
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 40
            CDSs (without protein)            :: 40
            Pseudo Genes (ambiguous residues) :: 0 of 40
            Pseudo Genes (frameshifted)       :: 5 of 40
            Pseudo Genes (incomplete)         :: 35 of 40
            Pseudo Genes (internal stop)      :: 4 of 40
            Pseudo Genes (multiple problems)  :: 3 of 40
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3945972
                     /organism="Marinobacter nauticus"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_072651"
                     /db_xref="taxon:2743"
                     /environmental_sample
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDTHNC010000001-CDTHNC010000073
WGS_SCAFLD  NZ_CDTHNC010000001-NZ_CDTHNC010000073
//
LOCUS       NZ_CDTDBO010000000   4147454 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Marinobacter flavimaris isolate MarMAG_116149, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDTDBO000000000
VERSION     NZ_CDTDBO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120696913
            Assembly: GCF_977302635.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Marinobacter flavimaris (marine metagenome)
  ORGANISM  Marinobacter flavimaris
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 4147454)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDTDBO000000000.1.
            The Marinobacter flavimaris whole genome shotgun (WGS) project has
            the project accession NZ_CDTDBO000000000.  This version of the
            project (01) has the accession number NZ_CDTDBO010000000, and
            consists of sequences CDTDBO010000001-CDTDBO010000078.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977302635.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 01:29:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,857
            CDSs (total)                      :: 3,825
            Genes (coding)                    :: 3,796
            CDSs (with protein)               :: 3,796
            Genes (RNA)                       :: 32
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 7 of 29
            Pseudo Genes (incomplete)         :: 21 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 5 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4147454
                     /organism="Marinobacter flavimaris"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_116149"
                     /db_xref="taxon:262076"
                     /environmental_sample
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDTDBO010000001-CDTDBO010000078
WGS_SCAFLD  NZ_CDTDBO010000001-NZ_CDTDBO010000078
//
LOCUS       NZ_JUTN01000000      2642715 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micrococcus luteus strain 773_MLUT, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JUTN00000000
VERSION     NZ_JUTN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03197983
            Assembly: GCF_001066245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micrococcus luteus
  ORGANISM  Micrococcus luteus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
REFERENCE   1  (bases 1 to 2642715)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2642715)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JUTN00000000.1.
            The Micrococcus luteus whole genome shotgun (WGS) project has the
            project accession NZ_JUTN00000000.  This version of the project
            (01) has the accession number NZ_JUTN01000000, and consists of
            sequences JUTN01000001-JUTN01000240.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 18x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001066245.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:34:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,608
            CDSs (total)                      :: 2,559
            Genes (coding)                    :: 2,482
            CDSs (with protein)               :: 2,482
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 16 of 77
            Pseudo Genes (incomplete)         :: 64 of 77
            Pseudo Genes (internal stop)      :: 2 of 77
            Pseudo Genes (multiple problems)  :: 5 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2642715
                     /organism="Micrococcus luteus"
                     /mol_type="genomic DNA"
                     /strain="773_MLUT"
                     /host="Homo sapiens"
                     /db_xref="taxon:1270"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JUTN01000001-JUTN01000240
WGS_SCAFLD  NZ_JUTN01000001-NZ_JUTN01000240
//
LOCUS       NZ_CMXV01000000      2074882 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria meningitidis strain NM1797, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CMXV00000000
VERSION     NZ_CMXV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA1031664
            Assembly: GCF_001148685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1
  AUTHORS   Informatics,Pathogen.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-MAR-2015) SC, Wellcome Trust Sanger Institute, CB10
            1SA, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CMXV00000000.1.
            The Neisseria meningitidis whole genome shotgun (WGS) project has
            the project accession NZ_CMXV00000000.  This version of the project
            (01) has the accession number NZ_CMXV01000000, and consists of
            sequences CMXV01000001-CMXV01000141.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001148685.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:35:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,149
            CDSs (total)                      :: 2,089
            Genes (coding)                    :: 1,914
            CDSs (with protein)               :: 1,914
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 175
            CDSs (without protein)            :: 175
            Pseudo Genes (ambiguous residues) :: 0 of 175
            Pseudo Genes (frameshifted)       :: 72 of 175
            Pseudo Genes (incomplete)         :: 112 of 175
            Pseudo Genes (internal stop)      :: 24 of 175
            Pseudo Genes (multiple problems)  :: 31 of 175
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2074882
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /strain="NM1797"
                     /serovar="Serogroup A"
                     /isolation_source="CSF"
                     /db_xref="taxon:487"
                     /geo_loc_name="Ghana:Kassena Nankana District"
                     /collection_date="2004"
WGS         CMXV01000001-CMXV01000141
WGS_SCAFLD  NZ_CMXV01000001-NZ_CMXV01000141
//
LOCUS       NZ_JUVX01000000      3838129 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Morganella morganii strain 716_MMOR, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JUVX00000000
VERSION     NZ_JUVX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03197921
            Assembly: GCF_001066005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Morganella morganii (Proteus morganii)
  ORGANISM  Morganella morganii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Morganella.
REFERENCE   1  (bases 1 to 3838129)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3838129)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JUVX00000000.1.
            The Morganella morganii whole genome shotgun (WGS) project has the
            project accession NZ_JUVX00000000.  This version of the project
            (01) has the accession number NZ_JUVX01000000, and consists of
            sequences JUVX01000001-JUVX01000166.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 12x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001066005.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:44:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,612
            Genes (coding)                    :: 3,546
            CDSs (with protein)               :: 3,546
            Genes (RNA)                       :: 33
            rRNAs                             :: 1, 2 (16S, 23S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 26
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 15 of 66
            Pseudo Genes (incomplete)         :: 52 of 66
            Pseudo Genes (internal stop)      :: 9 of 66
            Pseudo Genes (multiple problems)  :: 9 of 66
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3838129
                     /organism="Morganella morganii"
                     /mol_type="genomic DNA"
                     /strain="716_MMOR"
                     /host="Homo sapiens"
                     /db_xref="taxon:582"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JUVX01000001-JUVX01000166
WGS_SCAFLD  NZ_JUVX01000001-NZ_JUVX01000166
//
LOCUS       NZ_FNQO01000000      3982200 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Microbulbifer marinus strain CGMCC 1.10657, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNQO00000000
VERSION     NZ_FNQO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05216562
            Assembly: GCF_900107725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Microbulbifer marinus
  ORGANISM  Microbulbifer marinus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Microbulbiferaceae; Microbulbifer.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNQO00000000.1.
            The Microbulbifer marinus whole genome shotgun (WGS) project has
            the project accession NZ_FNQO00000000.  This version of the project
            (01) has the accession number NZ_FNQO01000000, and consists of
            sequences FNQO01000001-FNQO01000011.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900107725.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:56:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,450
            CDSs (total)                      :: 3,394
            Genes (coding)                    :: 3,384
            CDSs (with protein)               :: 3,384
            Genes (RNA)                       :: 56
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 46
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 0 of 10
            Pseudo Genes (incomplete)         :: 10 of 10
            Pseudo Genes (internal stop)      :: 0 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3982200
                     /organism="Microbulbifer marinus"
                     /mol_type="genomic DNA"
                     /strain="CGMCC 1.10657"
                     /type_material="type strain of Microbulbifer marinus"
                     /db_xref="taxon:658218"
WGS         FNQO01000001-FNQO01000011
WGS_SCAFLD  NZ_FNQO01000001-NZ_FNQO01000011
//
LOCUS       NZ_LDTN01000000      2881302 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mammaliicoccus sciuri strain NS36, whole genome shotgun sequencing
            project.
ACCESSION   NZ_LDTN00000000
VERSION     NZ_LDTN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03401357
            Assembly: GCF_001477335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (bases 1 to 2881302)
  AUTHORS   Midha,S., Bansal,K., Sharma,S., Kumar,N., Patil,P.P., Chaudhry,V.
            and Patil,P.B.
  TITLE     Genomic Resource of Rice Seed Associated Bacteria
  JOURNAL   Front Microbiol 6, 1551 (2016)
   PUBMED   26793183
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2881302)
  AUTHORS   Midha,S., Bansal,K., Chaudhry,V., Sharma,S., Kumar,N., Patil,P.P.
            and Patil,P.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2015) Bacterial Genomics and Evolution
            Laboratory, CSIR-Institute of Microbial Technology, Sector 39A,
            Chandigarh, Chandigarh 160036, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LDTN00000000.1.
            The Mammaliicoccus sciuri whole genome shotgun (WGS) project has
            the project accession NZ_LDTN00000000.  This version of the project
            (01) has the accession number NZ_LDTN01000000, and consists of
            sequences LDTN01000001-LDTN01000117.
            Source DNA available from Bacterial Genomics and Evolutionary
            Laboratory, CSIR-Institute of Microbial Technology, Chandigarh,
            India.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 7.5
            Genome Coverage       :: 90x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001477335.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:43:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,979
            CDSs (total)                      :: 2,917
            Genes (coding)                    :: 2,879
            CDSs (with protein)               :: 2,879
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 38
            CDSs (without protein)            :: 38
            Pseudo Genes (ambiguous residues) :: 0 of 38
            Pseudo Genes (frameshifted)       :: 13 of 38
            Pseudo Genes (incomplete)         :: 25 of 38
            Pseudo Genes (internal stop)      :: 10 of 38
            Pseudo Genes (multiple problems)  :: 8 of 38
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2881302
                     /organism="Mammaliicoccus sciuri"
                     /mol_type="genomic DNA"
                     /strain="NS36"
                     /host="Oryza sativa"
                     /db_xref="taxon:1296"
                     /geo_loc_name="India"
                     /collection_date="2013"
WGS         LDTN01000001-LDTN01000117
WGS_SCAFLD  NZ_LDTN01000001-NZ_LDTN01000117
//
LOCUS       NZ_AKUL01000000      4895947 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mycobacteroides abscessus subsp. bolletii 1S-154-0310, whole genome
            shotgun sequencing project.
ACCESSION   NZ_AKUL00000000
VERSION     NZ_AKUL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00672618
            Assembly: GCF_000308015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycobacteroides abscessus subsp. bolletii 1S-154-0310
  ORGANISM  Mycobacteroides abscessus subsp. bolletii 1S-154-0310
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacteroides; Mycobacteroides
            abscessus.
REFERENCE   1  (bases 1 to 4895947)
  AUTHORS   Tettelin,H., Chandrasekaran,P., Shallom,S.J., Park,I.K.,
            Agrawal,S., Ding,L., Myers,T.G., Gardina,P.J., Daugherty,S.C.,
            Conville,P., Arora,K., Drake,S.K., Yoon,Y.S., Sebastian,Y.,
            Hanks,M.E., Riley,D.R., Wong,S., Shamputa,I.C., Crabtree,J.,
            Angiuoli,S.V., Wallace,J.R., Brown-Elliott,B.A., Galens,K.,
            Niederweis,M., Hine,E., Sadzewicz,L., Sengamalay,N., Claypool,R.J.,
            Frein,C., Shefchek,K., Su,Q., Tallon,L.J., Boshoff,H.I., Barry,C.E.
            III, Milstone,A.M., Aitken,M.L., Oliver,K.N., Fraser,C.M.,
            Holland,S.M., Zelazny,A.M. and Sampaio,E.P.
  TITLE     Evolution of Mycobacterium abscessus subspecies massiliense in the
            human lung: cumulative mutations and deletion of porin genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4895947)
  AUTHORS   Tettelin,H., Chandrasekaran,P., Shallom,S.J., Park,I.K.,
            Agrawal,S., Ding,L., Myers,T.G., Gardina,P.J., Daugherty,S.C.,
            Conville,P., Arora,K., Drake,S.K., Yoon,Y.S., Sebastian,Y.,
            Hanks,M.E., Riley,D.R., Wong,S., Shamputa,I.C., Crabtree,J.,
            Angiuoli,S.V., Wallace,J.R., Brown-Elliott,B.A., Galens,K.,
            Niederweis,M., Hine,E., Sadzewicz,L., Sengamalay,N., Claypool,R.J.,
            Frein,C., Shefchek,K., Su,Q., Tallon,L.J., Boshoff,H.I., Barry,C.E.
            III, Milstone,A.M., Aitken,M.L., Oliver,K.N., Fraser,C.M.,
            Holland,S.M., Zelazny,A.M. and Sampaio,E.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-DEC-2014) Institute for Genome Sciences, University
            of Maryland School of Medicine, 801 W. Baltimore St., Baltimore, MD
            21201, USA
  REMARK    Annotation update by submitter
REFERENCE   3  (bases 1 to 4895947)
  AUTHORS   Holland,S., Zelazny,A., Sampaio,E., Olivier,K., Conville,P.,
            Hine,E., Su,Q., Daugherty,S., Shefchek,K., Sengamalay,N.,
            Watkins,K., Tallon,L., Sadzewicz,L., Fraser-Liggett,C. and
            Tettelin,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAR-2012) Institute for Genome Sciences, University
            of Maryland School of Medicine, 801 W. Baltimore St., Baltimore, MD
            21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AKUL00000000.1.
            The Mycobacteroides abscessus subsp. bolletii 1S-154-0310 whole
            genome shotgun (WGS) project has the project accession
            NZ_AKUL00000000.  This version of the project (01) has the
            accession number NZ_AKUL01000000, and consists of sequences
            AKUL01000001-AKUL01000005.
            Bacterial source available from the Biodefense and Emerging
            Infections Research Resources Repository.
            Annotation was updated on the contigs in December 2014.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Celera Assembler v. 7.0
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina; 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000308015.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:53:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,876
            CDSs (total)                      :: 4,823
            Genes (coding)                    :: 4,771
            CDSs (with protein)               :: 4,771
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 25 of 52
            Pseudo Genes (incomplete)         :: 36 of 52
            Pseudo Genes (internal stop)      :: 5 of 52
            Pseudo Genes (multiple problems)  :: 13 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4895947
                     /organism="Mycobacteroides abscessus subsp. bolletii
                     1S-154-0310"
                     /mol_type="genomic DNA"
                     /strain="1S-154-0310"
                     /isolation_source="bronchial alveolar lavage"
                     /host="Homo sapiens"
                     /sub_species="bolletii"
                     /db_xref="taxon:1001707"
                     /collection_date="10-Mar-2004"
WGS         AKUL01000001-AKUL01000005
WGS_SCAFLD  NZ_AKUL01000001-NZ_AKUL01000005
//
LOCUS       NZ_LPWF01000000      3100099 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methyloceanibacter superfactus strain R-67175, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LPWF00000000
VERSION     NZ_LPWF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04328994
            Assembly: GCF_001723305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Methyloceanibacter superfactus
  ORGANISM  Methyloceanibacter superfactus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Hyphomicrobiaceae; Methyloceanibacter.
REFERENCE   1  (bases 1 to 3100099)
  AUTHORS   Vekeman,B., Kerckhof,F.M., Cremers,G., de Vos,P., Vandamme,P.,
            Boon,N., Op den Camp,H.J. and Heylen,K.
  TITLE     New Methyloceanibacter diversity from North Sea sediments includes
            methanotroph containing solely the soluble methane monooxygenase
  JOURNAL   Environ Microbiol 18 (12), 4523-4536 (2016)
   PUBMED   27501305
REFERENCE   2  (bases 1 to 3100099)
  AUTHORS   Vekeman,B. and Heylen,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-JAN-2016) Biochemistry and Microbiology, Ghent
            University, K.L. Ledeganckstraat 35, Gent 9000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LPWF00000000.1.
            The Methyloceanibacter superfactus whole genome shotgun (WGS)
            project has the project accession NZ_LPWF00000000.  This version of
            the project (01) has the accession number NZ_LPWF01000000, and
            consists of sequences LPWF01000001-LPWF01000038.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 27.6x
            Sequencing Technology  :: IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001723305.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:52:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,321
            CDSs (total)                      :: 3,268
            Genes (coding)                    :: 2,946
            CDSs (with protein)               :: 2,946
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 322
            CDSs (without protein)            :: 322
            Pseudo Genes (ambiguous residues) :: 0 of 322
            Pseudo Genes (frameshifted)       :: 231 of 322
            Pseudo Genes (incomplete)         :: 119 of 322
            Pseudo Genes (internal stop)      :: 6 of 322
            Pseudo Genes (multiple problems)  :: 33 of 322
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3100099
                     /organism="Methyloceanibacter superfactus"
                     /mol_type="genomic DNA"
                     /strain="R-67175"
                     /isolation_source="marine sediment"
                     /type_material="type strain of Methyloceanibacter
                     superfactus"
                     /db_xref="taxon:1774969"
                     /geo_loc_name="Belgium:North Sea"
                     /collection_date="2012-09"
WGS         LPWF01000001-LPWF01000038
WGS_SCAFLD  NZ_LPWF01000001-NZ_LPWF01000038
//
LOCUS       NZ_FMVJ01000000      4720450 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Microvirga guangxiensis strain CGMCC 1.7666, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FMVJ00000000
VERSION     NZ_FMVJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02927923
            Assembly: GCF_900102135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Microvirga guangxiensis
  ORGANISM  Microvirga guangxiensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Microvirga.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FMVJ00000000.1.
            The Microvirga guangxiensis whole genome shotgun (WGS) project has
            the project accession NZ_FMVJ00000000.  This version of the project
            (01) has the accession number NZ_FMVJ01000000, and consists of
            sequences FMVJ01000001-FMVJ01000034.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900102135.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:06:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,521
            CDSs (total)                      :: 4,455
            Genes (coding)                    :: 4,379
            CDSs (with protein)               :: 4,379
            Genes (RNA)                       :: 66
            rRNAs                             :: 2, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 30 of 76
            Pseudo Genes (incomplete)         :: 55 of 76
            Pseudo Genes (internal stop)      :: 17 of 76
            Pseudo Genes (multiple problems)  :: 21 of 76
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4720450
                     /organism="Microvirga guangxiensis"
                     /mol_type="genomic DNA"
                     /strain="CGMCC 1.7666"
                     /type_material="type strain of Microvirga guangxiensis"
                     /db_xref="taxon:549386"
WGS         FMVJ01000001-FMVJ01000034
WGS_SCAFLD  NZ_FMVJ01000001-NZ_FMVJ01000034
//
LOCUS       NZ_LPWE01000000      3216104 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methyloceanibacter stevinii strain R-67176, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LPWE00000000
VERSION     NZ_LPWE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04328995
            Assembly: GCF_001723355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Methyloceanibacter stevinii
  ORGANISM  Methyloceanibacter stevinii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Hyphomicrobiaceae; Methyloceanibacter.
REFERENCE   1  (bases 1 to 3216104)
  AUTHORS   Vekeman,B., Kerckhof,F.M., Cremers,G., de Vos,P., Vandamme,P.,
            Boon,N., Op den Camp,H.J. and Heylen,K.
  TITLE     New Methyloceanibacter diversity from North Sea sediments includes
            methanotroph containing solely the soluble methane monooxygenase
  JOURNAL   Environ Microbiol 18 (12), 4523-4536 (2016)
   PUBMED   27501305
REFERENCE   2  (bases 1 to 3216104)
  AUTHORS   Vekeman,B. and Heylen,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-JAN-2016) Biochemistry and Microbiology, Ghent
            University, K.L. Ledeganckstraat 35, Gent 9000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LPWE00000000.1.
            The Methyloceanibacter stevinii whole genome shotgun (WGS) project
            has the project accession NZ_LPWE00000000.  This version of the
            project (01) has the accession number NZ_LPWE01000000, and consists
            of sequences LPWE01000001-LPWE01000014.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 26.6x
            Sequencing Technology  :: IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001723355.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:46:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,314
            CDSs (total)                      :: 3,261
            Genes (coding)                    :: 3,040
            CDSs (with protein)               :: 3,040
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 221
            CDSs (without protein)            :: 221
            Pseudo Genes (ambiguous residues) :: 0 of 221
            Pseudo Genes (frameshifted)       :: 156 of 221
            Pseudo Genes (incomplete)         :: 80 of 221
            Pseudo Genes (internal stop)      :: 2 of 221
            Pseudo Genes (multiple problems)  :: 16 of 221
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3216104
                     /organism="Methyloceanibacter stevinii"
                     /mol_type="genomic DNA"
                     /strain="R-67176"
                     /isolation_source="marine sediment"
                     /type_material="type strain of Methyloceanibacter
                     stevinii"
                     /db_xref="taxon:1774970"
                     /geo_loc_name="Belgium:North Sea"
                     /collection_date="2012-09"
WGS         LPWE01000001-LPWE01000014
WGS_SCAFLD  NZ_LPWE01000001-NZ_LPWE01000014
//
LOCUS       NZ_MDVU01000000      2761021 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mammaliicoccus sciuri strain P575, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MDVU00000000
VERSION     NZ_MDVU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05590270
            Assembly: GCF_001766775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (bases 1 to 2761021)
  AUTHORS   Zeman,M., Maslanova,I., Indrakova,A., Siborova,M., Mikulasek,K.,
            Bendickova,K., Plevka,P., Vrbovska,V., Zdrahal,Z., Doskar,J. and
            Pantucek,R.
  TITLE     Staphylococcus sciuri bacteriophages double-convert for
            staphylokinase and phospholipase, mediate interspecies plasmid
            transduction, and package mecA gene
  JOURNAL   Sci Rep 7, 46319 (2017)
   PUBMED   28406168
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2761021)
  AUTHORS   Vrbovska,V. and Bendickova,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-AUG-2016) Experimental Biology, Masaryk University,
            Kamenice 5, Brno 62500, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MDVU00000000.1.
            The Mammaliicoccus sciuri whole genome shotgun (WGS) project has
            the project accession NZ_MDVU00000000.  This version of the project
            (01) has the accession number NZ_MDVU01000000, and consists of
            sequences MDVU01000001-MDVU01000046.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 18-AUG-2016
            Assembly Method        :: SPAdes v. 5.0.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 202.0x
            Sequencing Technology  :: IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001766775.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:51:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,825
            CDSs (total)                      :: 2,764
            Genes (coding)                    :: 2,718
            CDSs (with protein)               :: 2,718
            Genes (RNA)                       :: 61
            rRNAs                             :: 6, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            partial rRNAs                     :: 1, 3 (5S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 21 of 46
            Pseudo Genes (incomplete)         :: 23 of 46
            Pseudo Genes (internal stop)      :: 4 of 46
            Pseudo Genes (multiple problems)  :: 2 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2761021
                     /organism="Mammaliicoccus sciuri"
                     /mol_type="genomic DNA"
                     /strain="P575"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:1296"
                     /geo_loc_name="Czech Republic"
                     /collection_date="2000"
                     /collected_by="Petr Petras"
                     /identified_by="Ivo Sedlacek"
WGS         MDVU01000001-MDVU01000046
WGS_SCAFLD  NZ_MDVU01000001-NZ_MDVU01000046
//
LOCUS       NZ_LCYG01000000      6470902 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Microvirga vignae strain BR3299, whole genome shotgun sequencing
            project.
ACCESSION   NZ_LCYG00000000
VERSION     NZ_LCYG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03652542
            Assembly: GCF_001017175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Microvirga vignae
  ORGANISM  Microvirga vignae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Microvirga.
REFERENCE   1  (bases 1 to 6470902)
  AUTHORS   Zilli,J.E., Passos,S.R., Leite,J., Xavier,G.R., Rumjaneck,N.G. and
            Simoes-Araujo,J.L.
  TITLE     Draft Genome Sequence of Microvirga vignae Strain BR 3299T, a Novel
            Symbiotic Nitrogen-Fixing Alphaproteobacterium Isolated from a
            Brazilian Semiarid Region
  JOURNAL   Genome Announc 3 (4), e00700-15 (2015)
   PUBMED   26159523
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6470902)
  AUTHORS   Zilli,J.E., Passos,S.R., Leite,J., Baldani,J.I., Xavier,G.R.,
            Rumjaneck,N.G. and Simoes-Araujo,J.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAY-2015) Genetic, Embrapa Agrobiologia, Antiga
            Rio-Sao Paulo, Km. 47, Seropedica, RJ 23891000, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LCYG00000000.1.
            The Microvirga vignae whole genome shotgun (WGS) project has the
            project accession NZ_LCYG00000000.  This version of the project
            (01) has the accession number NZ_LCYG01000000, and consists of
            sequences LCYG01000001-LCYG01000165.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 150.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001017175.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:10:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,390
            CDSs (total)                      :: 6,328
            Genes (coding)                    :: 6,032
            CDSs (with protein)               :: 6,032
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 296
            CDSs (without protein)            :: 296
            Pseudo Genes (ambiguous residues) :: 0 of 296
            Pseudo Genes (frameshifted)       :: 117 of 296
            Pseudo Genes (incomplete)         :: 234 of 296
            Pseudo Genes (internal stop)      :: 52 of 296
            Pseudo Genes (multiple problems)  :: 90 of 296
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6470902
                     /organism="Microvirga vignae"
                     /mol_type="genomic DNA"
                     /strain="BR3299"
                     /isolation_source="nodules of cowpea collected from a
                     semi-arid region"
                     /host="Vigna unguiculata"
                     /type_material="type strain of Microvirga vignae"
                     /db_xref="taxon:1225564"
                     /geo_loc_name="Brazil"
                     /lat_lon="9.22 S 40.30 W"
                     /altitude="400 m"
                     /collection_date="1997-10-02"
                     /collected_by="Embrapa Agrobiologia"
WGS         LCYG01000001-LCYG01000165
WGS_SCAFLD  NZ_LCYG01000001-NZ_LCYG01000165
//
LOCUS       NZ_LPWG01000000      3139022 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methyloceanibacter methanicus strain R-67174, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LPWG00000000
VERSION     NZ_LPWG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04328993
            Assembly: GCF_001723285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Methyloceanibacter methanicus
  ORGANISM  Methyloceanibacter methanicus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Hyphomicrobiaceae; Methyloceanibacter.
REFERENCE   1  (bases 1 to 3139022)
  AUTHORS   Vekeman,B., Kerckhof,F.M., Cremers,G., de Vos,P., Vandamme,P.,
            Boon,N., Op den Camp,H.J. and Heylen,K.
  TITLE     New Methyloceanibacter diversity from North Sea sediments includes
            methanotroph containing solely the soluble methane monooxygenase
  JOURNAL   Environ Microbiol 18 (12), 4523-4536 (2016)
   PUBMED   27501305
REFERENCE   2  (bases 1 to 3139022)
  AUTHORS   Vekeman,B. and Heylen,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-JAN-2016) Biochemistry and Microbiology, Ghent
            University, K.L. Ledeganckstraat 35, Gent 9000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LPWG00000000.1.
            The Methyloceanibacter methanicus whole genome shotgun (WGS)
            project has the project accession NZ_LPWG00000000.  This version of
            the project (01) has the accession number NZ_LPWG01000000, and
            consists of sequences LPWG01000001-LPWG01000014.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 15.5x
            Sequencing Technology  :: IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001723285.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:54:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,235
            CDSs (total)                      :: 3,181
            Genes (coding)                    :: 2,971
            CDSs (with protein)               :: 2,971
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 210
            CDSs (without protein)            :: 210
            Pseudo Genes (ambiguous residues) :: 0 of 210
            Pseudo Genes (frameshifted)       :: 131 of 210
            Pseudo Genes (incomplete)         :: 100 of 210
            Pseudo Genes (internal stop)      :: 3 of 210
            Pseudo Genes (multiple problems)  :: 23 of 210
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3139022
                     /organism="Methyloceanibacter methanicus"
                     /mol_type="genomic DNA"
                     /strain="R-67174"
                     /isolation_source="marine sediment"
                     /type_material="type strain of Methyloceanibacter
                     methanicus"
                     /db_xref="taxon:1774968"
                     /geo_loc_name="Belgium:North sea"
                     /collection_date="2012-09"
WGS         LPWG01000001-LPWG01000014
WGS_SCAFLD  NZ_LPWG01000001-NZ_LPWG01000014
//
LOCUS       NZ_LKUS01000000      4750225 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mycobacterium avium subsp. paratuberculosis strain 2015WD-1, whole
            genome shotgun sequencing project.
ACCESSION   NZ_LKUS00000000
VERSION     NZ_LKUS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04121034
            Assembly: GCF_001904575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycobacterium avium subsp. paratuberculosis
  ORGANISM  Mycobacterium avium subsp. paratuberculosis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            avium complex (MAC).
REFERENCE   1  (bases 1 to 4750225)
  AUTHORS   Yue,R., Liu,C., Barrow,P., Liu,F., Cui,Y., Yang,L., Zhao,D. and
            Zhou,X.
  TITLE     The isolation and molecular characterization of Mycobacterium avium
            subsp. paratuberculosis in Shandong province, China
  JOURNAL   Gut Pathog 8, 9 (2016)
   PUBMED   27006704
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4750225)
  AUTHORS   Zhou,X. and Liu,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-OCT-2015) College of Veternary Medicine, China
            Agricultural University, 2 W. Yuanmingyuan Rd., Beijing 100193,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LKUS00000000.1.
            The Mycobacterium avium subsp. paratuberculosis whole genome
            shotgun (WGS) project has the project accession NZ_LKUS00000000.
            This version of the project (01) has the accession number
            NZ_LKUS01000000, and consists of sequences
            LKUS01000001-LKUS01000307.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 2.04
            Genome Coverage       :: 200.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001904575.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:39:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,675
            CDSs (total)                      :: 4,623
            Genes (coding)                    :: 4,292
            CDSs (with protein)               :: 4,292
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 135 of 331
            Pseudo Genes (incomplete)         :: 188 of 331
            Pseudo Genes (internal stop)      :: 19 of 331
            Pseudo Genes (multiple problems)  :: 11 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4750225
                     /organism="Mycobacterium avium subsp. paratuberculosis"
                     /mol_type="genomic DNA"
                     /strain="2015WD-1"
                     /isolation_source="rectal feces"
                     /host="cattle"
                     /sub_species="paratuberculosis"
                     /db_xref="taxon:1770"
                     /geo_loc_name="China: Shandong Province, dairy farm"
                     /collection_date="2014-12-20"
                     /collected_by="Ruichao Yue"
                     /genotype="type C"
WGS         LKUS01000001-LKUS01000307
WGS_SCAFLD  NZ_KV880546-NZ_KV880592
WGS_SCAFLD  NZ_LKUS01000001-NZ_LKUS01000003
WGS_SCAFLD  NZ_LKUS01000007-NZ_LKUS01000009
WGS_SCAFLD  NZ_LKUS01000012
WGS_SCAFLD  NZ_LKUS01000015-NZ_LKUS01000025
WGS_SCAFLD  NZ_LKUS01000028-NZ_LKUS01000029
WGS_SCAFLD  NZ_LKUS01000034
WGS_SCAFLD  NZ_LKUS01000037-NZ_LKUS01000041
WGS_SCAFLD  NZ_LKUS01000044-NZ_LKUS01000047
WGS_SCAFLD  NZ_LKUS01000050-NZ_LKUS01000077
WGS_SCAFLD  NZ_LKUS01000080-NZ_LKUS01000081
WGS_SCAFLD  NZ_LKUS01000084-NZ_LKUS01000093
WGS_SCAFLD  NZ_LKUS01000096-NZ_LKUS01000100
WGS_SCAFLD  NZ_LKUS01000103-NZ_LKUS01000108
WGS_SCAFLD  NZ_LKUS01000111-NZ_LKUS01000116
WGS_SCAFLD  NZ_LKUS01000121-NZ_LKUS01000130
WGS_SCAFLD  NZ_LKUS01000133-NZ_LKUS01000134
WGS_SCAFLD  NZ_LKUS01000137-NZ_LKUS01000139
WGS_SCAFLD  NZ_LKUS01000142-NZ_LKUS01000151
WGS_SCAFLD  NZ_LKUS01000154-NZ_LKUS01000157
WGS_SCAFLD  NZ_LKUS01000160-NZ_LKUS01000183
WGS_SCAFLD  NZ_LKUS01000186-NZ_LKUS01000190
WGS_SCAFLD  NZ_LKUS01000193-NZ_LKUS01000196
WGS_SCAFLD  NZ_LKUS01000199
WGS_SCAFLD  NZ_LKUS01000204-NZ_LKUS01000209
WGS_SCAFLD  NZ_LKUS01000212-NZ_LKUS01000230
WGS_SCAFLD  NZ_LKUS01000233-NZ_LKUS01000234
WGS_SCAFLD  NZ_LKUS01000239-NZ_LKUS01000241
WGS_SCAFLD  NZ_LKUS01000244-NZ_LKUS01000245
WGS_SCAFLD  NZ_LKUS01000248-NZ_LKUS01000249
WGS_SCAFLD  NZ_LKUS01000252-NZ_LKUS01000253
WGS_SCAFLD  NZ_LKUS01000256-NZ_LKUS01000257
WGS_SCAFLD  NZ_LKUS01000260-NZ_LKUS01000262
WGS_SCAFLD  NZ_LKUS01000265-NZ_LKUS01000270
WGS_SCAFLD  NZ_LKUS01000273
WGS_SCAFLD  NZ_LKUS01000282-NZ_LKUS01000284
WGS_SCAFLD  NZ_LKUS01000287
WGS_SCAFLD  NZ_LKUS01000290-NZ_LKUS01000293
WGS_SCAFLD  NZ_LKUS01000296-NZ_LKUS01000298
WGS_SCAFLD  NZ_LKUS01000301-NZ_LKUS01000302
WGS_SCAFLD  NZ_LKUS01000305
//
LOCUS       NZ_LPWD01000000      2997425 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methyloceanibacter marginalis strain R-67177, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LPWD00000000
VERSION     NZ_LPWD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04328996
            Assembly: GCF_001723295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Methyloceanibacter marginalis
  ORGANISM  Methyloceanibacter marginalis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Hyphomicrobiaceae; Methyloceanibacter.
REFERENCE   1  (bases 1 to 2997425)
  AUTHORS   Vekeman,B., Kerckhof,F.M., Cremers,G., de Vos,P., Vandamme,P.,
            Boon,N., Op den Camp,H.J. and Heylen,K.
  TITLE     New Methyloceanibacter diversity from North Sea sediments includes
            methanotroph containing solely the soluble methane monooxygenase
  JOURNAL   Environ Microbiol 18 (12), 4523-4536 (2016)
   PUBMED   27501305
REFERENCE   2  (bases 1 to 2997425)
  AUTHORS   Vekeman,B. and Heylen,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-JAN-2016) Biochemistry and Microbiology, Ghent
            University, K.L. Ledeganckstraat 35, Gent 9000, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LPWD00000000.1.
            The Methyloceanibacter marginalis whole genome shotgun (WGS)
            project has the project accession NZ_LPWD00000000.  This version of
            the project (01) has the accession number NZ_LPWD01000000, and
            consists of sequences LPWD01000001-LPWD01000470.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 5.3x
            Sequencing Technology  :: IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001723295.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:54:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,623
            CDSs (total)                      :: 3,574
            Genes (coding)                    :: 3,097
            CDSs (with protein)               :: 3,097
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 477
            CDSs (without protein)            :: 477
            Pseudo Genes (ambiguous residues) :: 0 of 477
            Pseudo Genes (frameshifted)       :: 294 of 477
            Pseudo Genes (incomplete)         :: 218 of 477
            Pseudo Genes (internal stop)      :: 0 of 477
            Pseudo Genes (multiple problems)  :: 35 of 477
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2997425
                     /organism="Methyloceanibacter marginalis"
                     /mol_type="genomic DNA"
                     /strain="R-67177"
                     /isolation_source="marine sediment"
                     /type_material="type strain of Methyloceanibacter
                     marginalis"
                     /db_xref="taxon:1774971"
                     /geo_loc_name="Belgium:North Sea"
                     /collection_date="2012-09"
WGS         LPWD01000001-LPWD01000470
WGS_SCAFLD  NZ_LPWD01000001-NZ_LPWD01000470
//
LOCUS       NZ_LDTL01000000      2878573 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mammaliicoccus sciuri strain NS112, whole genome shotgun sequencing
            project.
ACCESSION   NZ_LDTL00000000
VERSION     NZ_LDTL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03401360
            Assembly: GCF_001477395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (bases 1 to 2878573)
  AUTHORS   Midha,S., Bansal,K., Sharma,S., Kumar,N., Patil,P.P., Chaudhry,V.
            and Patil,P.B.
  TITLE     Genomic Resource of Rice Seed Associated Bacteria
  JOURNAL   Front Microbiol 6, 1551 (2016)
   PUBMED   26793183
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2878573)
  AUTHORS   Midha,S., Bansal,K., Chaudhry,V., Sharma,S., Kumar,N., Patil,P.P.
            and Patil,P.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2015) Bacterial Genomics and Evolution
            Laboratory, CSIR-Institute of Microbial Technology, Sector 39A,
            Chandigarh, Chandigarh 160036, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LDTL00000000.1.
            The Mammaliicoccus sciuri whole genome shotgun (WGS) project has
            the project accession NZ_LDTL00000000.  This version of the project
            (01) has the accession number NZ_LDTL01000000, and consists of
            sequences LDTL01000001-LDTL01000136.
            Source DNA available from Bacterial Genomics and Evolutionary
            Laboratory, CSIR-Institute of Microbial Technology, Chandigarh,
            India.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 7.5
            Genome Coverage       :: 73x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001477395.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:05:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,993
            CDSs (total)                      :: 2,932
            Genes (coding)                    :: 2,890
            CDSs (with protein)               :: 2,890
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 12 of 42
            Pseudo Genes (incomplete)         :: 30 of 42
            Pseudo Genes (internal stop)      :: 10 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2878573
                     /organism="Mammaliicoccus sciuri"
                     /mol_type="genomic DNA"
                     /strain="NS112"
                     /host="Oryza sativa"
                     /db_xref="taxon:1296"
                     /geo_loc_name="India"
                     /collection_date="2013"
WGS         LDTL01000001-LDTL01000136
WGS_SCAFLD  NZ_LDTL01000001-NZ_LDTL01000136
//
LOCUS       NZ_QQDN01000000      2140748 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria meningitidis strain M40036, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QQDN00000000
VERSION     NZ_QQDN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09704819
            Assembly: GCF_003495985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2140748)
  AUTHORS   Topaz,N., Boxrud,D., Retchless,A.C., Nichols,M., Chang,H.Y., Hu,F.
            and Wang,X.
  TITLE     BMScan: using whole genome similarity to rapidly and accurately
            identify bacterial meningitis causing species
  JOURNAL   BMC Infect Dis 18 (1), 405 (2018)
   PUBMED   30111301
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2140748)
  AUTHORS   Topaz,N., Retchless,A.C., Chang,H.-Y., Hu,F. and Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUL-2018) Bacterial Meningitis Lab, Centers for
            Disease Control and Prevention, 1600 Clifton Rd, Atlanta, GA 30333,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QQDN00000000.1.
            The Neisseria meningitidis whole genome shotgun (WGS) project has
            the project accession NZ_QQDN00000000.  This version of the project
            (01) has the accession number NZ_QQDN01000000, and consists of
            sequences QQDN01000001-QQDN01000112.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 44.80646428356108x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003495985.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:52:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,220
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 1,985
            CDSs (with protein)               :: 1,985
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 173
            CDSs (without protein)            :: 173
            Pseudo Genes (ambiguous residues) :: 0 of 173
            Pseudo Genes (frameshifted)       :: 44 of 173
            Pseudo Genes (incomplete)         :: 135 of 173
            Pseudo Genes (internal stop)      :: 18 of 173
            Pseudo Genes (multiple problems)  :: 22 of 173
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2140748
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /strain="M40036"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collected_by="Centers for Disease Control and Prevention"
WGS         QQDN01000001-QQDN01000112
WGS_SCAFLD  NZ_QQDN01000001-NZ_QQDN01000112
//
LOCUS       NZ_LKUT01000000      4726962 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mycobacterium avium subsp. paratuberculosis strain 2015WD-2, whole
            genome shotgun sequencing project.
ACCESSION   NZ_LKUT00000000
VERSION     NZ_LKUT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04121035
            Assembly: GCF_001904595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycobacterium avium subsp. paratuberculosis
  ORGANISM  Mycobacterium avium subsp. paratuberculosis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            avium complex (MAC).
REFERENCE   1  (bases 1 to 4726962)
  AUTHORS   Yue,R., Liu,C., Barrow,P., Liu,F., Cui,Y., Yang,L., Zhao,D. and
            Zhou,X.
  TITLE     The isolation and molecular characterization of Mycobacterium avium
            subsp. paratuberculosis in Shandong province, China
  JOURNAL   Gut Pathog 8, 9 (2016)
   PUBMED   27006704
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4726962)
  AUTHORS   Zhou,X. and Liu,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-OCT-2015) College of Veternary Medicine, China
            Agricultural University, 2 W. Yuanmingyuan Rd., Beijing 100193,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LKUT00000000.1.
            The Mycobacterium avium subsp. paratuberculosis whole genome
            shotgun (WGS) project has the project accession NZ_LKUT00000000.
            This version of the project (01) has the accession number
            NZ_LKUT01000000, and consists of sequences
            LKUT01000001-LKUT01000284.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 2.04
            Genome Coverage       :: 150.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001904595.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:51:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,666
            CDSs (total)                      :: 4,613
            Genes (coding)                    :: 4,288
            CDSs (with protein)               :: 4,288
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 325
            CDSs (without protein)            :: 325
            Pseudo Genes (ambiguous residues) :: 0 of 325
            Pseudo Genes (frameshifted)       :: 139 of 325
            Pseudo Genes (incomplete)         :: 187 of 325
            Pseudo Genes (internal stop)      :: 19 of 325
            Pseudo Genes (multiple problems)  :: 20 of 325
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4726962
                     /organism="Mycobacterium avium subsp. paratuberculosis"
                     /mol_type="genomic DNA"
                     /strain="2015WD-2"
                     /isolation_source="rectal feces"
                     /host="cattle"
                     /sub_species="paratuberculosis"
                     /db_xref="taxon:1770"
                     /geo_loc_name="China: Shandong Province, dairy farm"
                     /collection_date="2014-12-20"
                     /collected_by="Ruichao Yue"
                     /genotype="type C"
WGS         LKUT01000001-LKUT01000284
WGS_SCAFLD  NZ_KV880593-NZ_KV880636
WGS_SCAFLD  NZ_LKUT01000001-NZ_LKUT01000004
WGS_SCAFLD  NZ_LKUT01000007-NZ_LKUT01000021
WGS_SCAFLD  NZ_LKUT01000024-NZ_LKUT01000030
WGS_SCAFLD  NZ_LKUT01000033-NZ_LKUT01000046
WGS_SCAFLD  NZ_LKUT01000049-NZ_LKUT01000067
WGS_SCAFLD  NZ_LKUT01000070
WGS_SCAFLD  NZ_LKUT01000075-NZ_LKUT01000079
WGS_SCAFLD  NZ_LKUT01000082-NZ_LKUT01000083
WGS_SCAFLD  NZ_LKUT01000086-NZ_LKUT01000087
WGS_SCAFLD  NZ_LKUT01000090-NZ_LKUT01000092
WGS_SCAFLD  NZ_LKUT01000095-NZ_LKUT01000099
WGS_SCAFLD  NZ_LKUT01000102-NZ_LKUT01000118
WGS_SCAFLD  NZ_LKUT01000121-NZ_LKUT01000124
WGS_SCAFLD  NZ_LKUT01000127
WGS_SCAFLD  NZ_LKUT01000130
WGS_SCAFLD  NZ_LKUT01000135
WGS_SCAFLD  NZ_LKUT01000138-NZ_LKUT01000148
WGS_SCAFLD  NZ_LKUT01000155
WGS_SCAFLD  NZ_LKUT01000158-NZ_LKUT01000162
WGS_SCAFLD  NZ_LKUT01000165-NZ_LKUT01000176
WGS_SCAFLD  NZ_LKUT01000179-NZ_LKUT01000183
WGS_SCAFLD  NZ_LKUT01000186-NZ_LKUT01000194
WGS_SCAFLD  NZ_LKUT01000197-NZ_LKUT01000201
WGS_SCAFLD  NZ_LKUT01000206-NZ_LKUT01000217
WGS_SCAFLD  NZ_LKUT01000220-NZ_LKUT01000222
WGS_SCAFLD  NZ_LKUT01000225-NZ_LKUT01000228
WGS_SCAFLD  NZ_LKUT01000233-NZ_LKUT01000235
WGS_SCAFLD  NZ_LKUT01000238-NZ_LKUT01000241
WGS_SCAFLD  NZ_LKUT01000244-NZ_LKUT01000250
WGS_SCAFLD  NZ_LKUT01000253-NZ_LKUT01000254
WGS_SCAFLD  NZ_LKUT01000257
WGS_SCAFLD  NZ_LKUT01000264
WGS_SCAFLD  NZ_LKUT01000267
WGS_SCAFLD  NZ_LKUT01000272-NZ_LKUT01000273
WGS_SCAFLD  NZ_LKUT01000276-NZ_LKUT01000278
WGS_SCAFLD  NZ_LKUT01000281-NZ_LKUT01000284
//
LOCUS       NZ_JWNY01000000      2071218 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria meningitidis strain Nm441005, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JWNY00000000
VERSION     NZ_JWNY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03267222
            Assembly: GCF_003995675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2071218)
  AUTHORS   Zhu,B.
  TITLE     Subtyping of N. meningitidis based on genome sequence
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2071218)
  AUTHORS   Zhu,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-DEC-2014) Department of Respiratory Infectious
            Diseases, National Institute for Communicable Disease Control and
            Prevention, Chinese Center for Disease Control and Prevention, 155,
            Changbai Road, Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWNY00000000.1.
            The Neisseria meningitidis whole genome shotgun (WGS) project has
            the project accession NZ_JWNY00000000.  This version of the project
            (01) has the accession number NZ_JWNY01000000, and consists of
            sequences JWNY01000001-JWNY01000118.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003995675.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:11:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,075
            Genes (coding)                    :: 1,906
            CDSs (with protein)               :: 1,906
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 169
            CDSs (without protein)            :: 169
            Pseudo Genes (ambiguous residues) :: 0 of 169
            Pseudo Genes (frameshifted)       :: 57 of 169
            Pseudo Genes (incomplete)         :: 125 of 169
            Pseudo Genes (internal stop)      :: 19 of 169
            Pseudo Genes (multiple problems)  :: 29 of 169
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2071218
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /strain="Nm441005"
                     /isolation_source="Cerebro-Spinal Fluid"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="China: Guangdong province"
                     /lat_lon="23.1 N 113.3 E"
                     /collection_date="2010-01-01"
                     /collected_by="Guangdong CDC"
WGS         JWNY01000001-JWNY01000118
WGS_SCAFLD  NZ_JWNY01000001-NZ_JWNY01000118
//
LOCUS       NZ_JSUK01000000      2116476 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria meningitidis strain 520814, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JSUK00000000
VERSION     NZ_JSUK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03145749
            Assembly: GCF_003702685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2116476)
  AUTHORS   Xu,Z., Du,P., Zhu,B., Xu,L., Wang,H., Gao,Y., Zhou,H., Zhang,W.,
            Chen,C. and Shao,Z.
  TITLE     Phylogenetic study of clonal complex (CC)198 capsule null locus
            (cnl) genomes: A distinctive group within the species Neisseria
            meningitidis
  JOURNAL   Infect Genet Evol 34, 372-377 (2015)
   PUBMED   26171575
REFERENCE   2  (bases 1 to 2116476)
  AUTHORS   Xu,Z., Du,P., Zhu,B., Xu,L., Wang,H., Gao,Y., Wang,Z., Zhang,W.,
            Zhou,H. and Shao,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2014) National Institute for Communicable Disease
            Control and Prevention, Chinese Center for Disease Control and
            Prevention, P.O. Box 5, Changping, Beijing, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JSUK00000000.1.
            The Neisseria meningitidis whole genome shotgun (WGS) project has
            the project accession NZ_JSUK00000000.  This version of the project
            (01) has the accession number NZ_JSUK01000000, and consists of
            sequences JSUK01000001-JSUK01000093.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.01
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 157.0x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003702685.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:06:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,174
            CDSs (total)                      :: 2,116
            Genes (coding)                    :: 1,950
            CDSs (with protein)               :: 1,950
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 55 of 166
            Pseudo Genes (incomplete)         :: 123 of 166
            Pseudo Genes (internal stop)      :: 14 of 166
            Pseudo Genes (multiple problems)  :: 24 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2116476
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /strain="520814"
                     /isolation_source="retropharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="China: Guizhou province"
                     /lat_lon="27.20 N 105.04 E"
                     /collection_date="2007-10-09"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, Chinese Center for Disease Control
                     and Prevention"
WGS         JSUK01000001-JSUK01000093
WGS_SCAFLD  NZ_JSUK01000001-NZ_JSUK01000093
//
LOCUS       NZ_JTHG01000000      6930824 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methylobacterium indicum strain SE3.6, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JTHG00000000
VERSION     NZ_JTHG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03217761
            Assembly: GCF_001043875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Methylobacterium indicum
  ORGANISM  Methylobacterium indicum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1  (bases 1 to 6930824)
  AUTHORS   Chaudhry,V., Baindara,P., Pal,V.K., Chawla,N., Patil,P.B. and
            Korpole,S.
  TITLE     Methylobacterium indicum sp. nov., a facultative methylotrophic
            bacterium isolated from rice seed
  JOURNAL   Syst Appl Microbiol 39 (1), 25-32 (2016)
   PUBMED   26776106
REFERENCE   2  (bases 1 to 6930824)
  AUTHORS   Chaudhry,V. and Patil,P.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2014) Bacterial Genomics & Evolution Lab,
            CSIR-Institute of Microbial Technology, Sector 39A, Chandigarh,
            Chandigarh 160036, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JTHG00000000.1.
            The Methylobacterium indicum whole genome shotgun (WGS) project has
            the project accession NZ_JTHG00000000.  This version of the project
            (01) has the accession number NZ_JTHG01000000, and consists of
            sequences JTHG01000001-JTHG01000560.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Originally submitted as Methylobacterium platani.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-NOV-2014
            Assembly Method        :: CLC NGS Cell v. 7.0.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 67.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001043875.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:07:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,684
            CDSs (total)                      :: 6,609
            Genes (coding)                    :: 6,361
            CDSs (with protein)               :: 6,361
            Genes (RNA)                       :: 75
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 248
            CDSs (without protein)            :: 248
            Pseudo Genes (ambiguous residues) :: 0 of 248
            Pseudo Genes (frameshifted)       :: 46 of 248
            Pseudo Genes (incomplete)         :: 220 of 248
            Pseudo Genes (internal stop)      :: 23 of 248
            Pseudo Genes (multiple problems)  :: 39 of 248
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6930824
                     /organism="Methylobacterium indicum"
                     /mol_type="genomic DNA"
                     /strain="SE3.6"
                     /isolation_source="rice"
                     /db_xref="taxon:1775910"
                     /geo_loc_name="India"
                     /collection_date="2013"
WGS         JTHG01000001-JTHG01000560
WGS_SCAFLD  NZ_JTHG01000001-NZ_JTHG01000560
//
LOCUS       NZ_JWNE01000000      2063914 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria meningitidis strain Nm350601, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JWNE00000000
VERSION     NZ_JWNE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03267135
            Assembly: GCF_003995505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2063914)
  AUTHORS   Zhu,B.
  TITLE     Subtyping of N. meningitidis based on genome sequence
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2063914)
  AUTHORS   Zhu,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2014) Department of Respiratory Infectious
            Diseases, National Institute for Communicable Disease Control and
            Prevention, Chinese Center for Disease Control and Prevention, 155,
            Changbai Road, Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWNE00000000.1.
            The Neisseria meningitidis whole genome shotgun (WGS) project has
            the project accession NZ_JWNE00000000.  This version of the project
            (01) has the accession number NZ_JWNE01000000, and consists of
            sequences JWNE01000001-JWNE01000111.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003995505.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:11:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,142
            CDSs (total)                      :: 2,082
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 170
            CDSs (without protein)            :: 170
            Pseudo Genes (ambiguous residues) :: 0 of 170
            Pseudo Genes (frameshifted)       :: 49 of 170
            Pseudo Genes (incomplete)         :: 133 of 170
            Pseudo Genes (internal stop)      :: 11 of 170
            Pseudo Genes (multiple problems)  :: 22 of 170
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063914
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /strain="Nm350601"
                     /isolation_source="Cerebro-Spinal Fluid"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="China: Fujian province"
                     /lat_lon="26.0 N 119.3 E"
                     /collection_date="2006-01-20"
                     /collected_by="Fujian CDC"
WGS         JWNE01000001-JWNE01000111
WGS_SCAFLD  NZ_JWNE01000001-NZ_JWNE01000111
//
LOCUS       NZ_JWMW01000000      2122773 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria meningitidis strain Nm310501, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JWMW00000000
VERSION     NZ_JWMW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03266515
            Assembly: GCF_003995055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2122773)
  AUTHORS   Zhu,B.
  TITLE     Subtyping of Neisseria meningitidis based on core genome sequence
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2122773)
  AUTHORS   Zhu,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2014) Department of Respiratory Infectious
            Diseases, National Institute for Communicable Disease Control and
            Prevention, Chinese Center for Disease Control and Prevention, 155,
            Changbai Road, Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWMW00000000.1.
            The Neisseria meningitidis whole genome shotgun (WGS) project has
            the project accession NZ_JWMW00000000.  This version of the project
            (01) has the accession number NZ_JWMW01000000, and consists of
            sequences JWMW01000001-JWMW01000075.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003995055.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:15:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,170
            CDSs (total)                      :: 2,110
            Genes (coding)                    :: 1,941
            CDSs (with protein)               :: 1,941
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 169
            CDSs (without protein)            :: 169
            Pseudo Genes (ambiguous residues) :: 0 of 169
            Pseudo Genes (frameshifted)       :: 58 of 169
            Pseudo Genes (incomplete)         :: 118 of 169
            Pseudo Genes (internal stop)      :: 18 of 169
            Pseudo Genes (multiple problems)  :: 24 of 169
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2122773
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /strain="Nm310501"
                     /isolation_source="Cerebro-Spinal Fluid"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="China: Shanghai City"
                     /lat_lon="31.2 N 121.5 E"
                     /collection_date="2005-02-20"
                     /collected_by="Shanghai CDC"
WGS         JWMW01000001-JWMW01000075
WGS_SCAFLD  NZ_JWMW01000001-NZ_JWMW01000075
//
LOCUS       NZ_JWMQ01000000      2115650 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria meningitidis strain Nm101108, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JWMQ00000000
VERSION     NZ_JWMQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03266126
            Assembly: GCF_003995045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2115650)
  AUTHORS   Zhu,B.
  TITLE     Subtyping of N. meningitidis based on genome sequence
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2115650)
  AUTHORS   Zhu,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2014) Department of Respiratory Infectious
            Diseases, National Institute for Communicable Disease Control and
            Prevention, Chinese Center for Disease Control and Prevention, 155,
            Changbai Road, Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWMQ00000000.1.
            The Neisseria meningitidis whole genome shotgun (WGS) project has
            the project accession NZ_JWMQ00000000.  This version of the project
            (01) has the accession number NZ_JWMQ01000000, and consists of
            sequences JWMQ01000001-JWMQ01000076.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003995045.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:16:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,170
            CDSs (total)                      :: 2,111
            Genes (coding)                    :: 1,949
            CDSs (with protein)               :: 1,949
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 162
            CDSs (without protein)            :: 162
            Pseudo Genes (ambiguous residues) :: 0 of 162
            Pseudo Genes (frameshifted)       :: 45 of 162
            Pseudo Genes (incomplete)         :: 120 of 162
            Pseudo Genes (internal stop)      :: 19 of 162
            Pseudo Genes (multiple problems)  :: 19 of 162
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115650
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /strain="Nm101108"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="China: Beijing City"
                     /lat_lon="39.9 N 116.4 E"
                     /collection_date="2011-06-24"
                     /collected_by="Beijing CDC"
WGS         JWMQ01000001-JWMQ01000076
WGS_SCAFLD  NZ_JWMQ01000001-NZ_JWMQ01000076
//
LOCUS       NZ_FNGA01000000      3871739 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Maridesulfovibrio ferrireducens strain DSM 16995, whole genome
            shotgun sequencing project.
ACCESSION   NZ_FNGA00000000
VERSION     NZ_FNGA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05660337
            Assembly: GCF_900101105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Maridesulfovibrio ferrireducens
  ORGANISM  Maridesulfovibrio ferrireducens
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Maridesulfovibrio.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNGA00000000.1.
            The Maridesulfovibrio ferrireducens whole genome shotgun (WGS)
            project has the project accession NZ_FNGA00000000.  This version of
            the project (01) has the accession number NZ_FNGA01000000, and
            consists of sequences FNGA01000001-FNGA01000012.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900101105.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:59:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,476
            CDSs (total)                      :: 3,406
            Genes (coding)                    :: 3,398
            CDSs (with protein)               :: 3,398
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 1, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3871739
                     /organism="Maridesulfovibrio ferrireducens"
                     /mol_type="genomic DNA"
                     /strain="DSM 16995"
                     /type_material="type strain of Desulfovibrio
                     ferrireducens"
                     /db_xref="taxon:246191"
                     /lat_lon="78.2527 N 17.0828 E"
WGS         FNGA01000001-FNGA01000012
WGS_SCAFLD  NZ_FNGA01000001-NZ_FNGA01000012
//
LOCUS       NZ_JWOP01000000      2187444 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria meningitidis strain NmGZ80003, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JWOP00000000
VERSION     NZ_JWOP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03267303
            Assembly: GCF_003996135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2187444)
  AUTHORS   Zhu,B.
  TITLE     Subtyping of Neisseria meningitidis based on genome sequence
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2187444)
  AUTHORS   Zhu,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-DEC-2014) Department of Respiratory Infectious
            Diseases, National Institute for Communicable Disease Control and
            Prevention, Chinese Center for Disease Control and Prevention, 155,
            Changbai Road, Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWOP00000000.1.
            The Neisseria meningitidis whole genome shotgun (WGS) project has
            the project accession NZ_JWOP00000000.  This version of the project
            (01) has the accession number NZ_JWOP01000000, and consists of
            sequences JWOP01000001-JWOP01000063.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003996135.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:16:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,186
            Genes (coding)                    :: 2,014
            CDSs (with protein)               :: 2,014
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 172
            CDSs (without protein)            :: 172
            Pseudo Genes (ambiguous residues) :: 0 of 172
            Pseudo Genes (frameshifted)       :: 63 of 172
            Pseudo Genes (incomplete)         :: 122 of 172
            Pseudo Genes (internal stop)      :: 18 of 172
            Pseudo Genes (multiple problems)  :: 28 of 172
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2187444
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /strain="NmGZ80003"
                     /isolation_source="Cerebro-Spinal Fluid"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="China: Guizhoui province"
                     /lat_lon="26.6 N 106.7 E"
                     /collection_date="1956-01-01"
                     /collected_by="Guizhou CDC"
WGS         JWOP01000001-JWOP01000063
WGS_SCAFLD  NZ_JWOP01000001-NZ_JWOP01000063
//
LOCUS       NZ_UGQH01000000      4067407 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Morganella morganii strain NCTC12286, whole genome shotgun
            sequencing project.
ACCESSION   NZ_UGQH00000000
VERSION     NZ_UGQH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA104200656
            Assembly: GCF_900453165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Morganella morganii (Proteus morganii)
  ORGANISM  Morganella morganii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Morganella.
REFERENCE   1
  AUTHORS   Doyle,S.
  CONSRTM   Pathogen Informatics
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JUN-2018) WTSI, Pathogen Informatics, Wellcome Trust
            Sanger Institute, CB10 1SA, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            UGQH00000000.1.
            The Morganella morganii whole genome shotgun (WGS) project has the
            project accession NZ_UGQH00000000.  This version of the project
            (01) has the accession number NZ_UGQH01000000, and consists of
            sequences UGQH01000001-UGQH01000002.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900453165.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:16:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,996
            CDSs (total)                      :: 3,890
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 106
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 121
            Pseudo Genes (ambiguous residues) :: 0 of 121
            Pseudo Genes (frameshifted)       :: 98 of 121
            Pseudo Genes (incomplete)         :: 27 of 121
            Pseudo Genes (internal stop)      :: 3 of 121
            Pseudo Genes (multiple problems)  :: 7 of 121
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4067407
                     /organism="Morganella morganii"
                     /mol_type="genomic DNA"
                     /strain="NCTC12286"
                     /serovar="not available: to be reported later"
                     /isolation_source="urine"
                     /culture_collection="NCTC:12286"
                     /db_xref="taxon:582"
                     /geo_loc_name="United Kingdom: Dublin"
                     /collection_date="1900/1989"
WGS         UGQH01000001-UGQH01000002
WGS_SCAFLD  NZ_UGQH01000001-NZ_UGQH01000002
//
LOCUS       NZ_JTHF01000000      6921653 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methylobacterium indicum strain SE2.11, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JTHF00000000
VERSION     NZ_JTHF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03217758
            Assembly: GCF_001043895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Methylobacterium indicum
  ORGANISM  Methylobacterium indicum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1  (bases 1 to 6921653)
  AUTHORS   Chaudhry,V., Baindara,P., Pal,V.K., Chawla,N., Patil,P.B. and
            Korpole,S.
  TITLE     Methylobacterium indicum sp. nov., a facultative methylotrophic
            bacterium isolated from rice seed
  JOURNAL   Syst Appl Microbiol 39 (1), 25-32 (2016)
   PUBMED   26776106
REFERENCE   2  (bases 1 to 6921653)
  AUTHORS   Chaudhry,V. and Patil,P.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2014) Bacterial Genomics & Evolution Lab,
            CSIR-Institute of Microbial Technology, Sector 39A, Chandigarh,
            Chandigarh 160036, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JTHF00000000.1.
            The Methylobacterium indicum whole genome shotgun (WGS) project has
            the project accession NZ_JTHF00000000.  This version of the project
            (01) has the accession number NZ_JTHF01000000, and consists of
            sequences JTHF01000001-JTHF01000506.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Originally submitted as Methylobacterium platani.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-NOV-2014
            Assembly Method        :: CLC NGS Cell v. 7.0.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001043895.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:13:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,644
            CDSs (total)                      :: 6,575
            Genes (coding)                    :: 6,358
            CDSs (with protein)               :: 6,358
            Genes (RNA)                       :: 69
            rRNAs                             :: 6, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 217
            CDSs (without protein)            :: 217
            Pseudo Genes (ambiguous residues) :: 0 of 217
            Pseudo Genes (frameshifted)       :: 40 of 217
            Pseudo Genes (incomplete)         :: 191 of 217
            Pseudo Genes (internal stop)      :: 24 of 217
            Pseudo Genes (multiple problems)  :: 37 of 217
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6921653
                     /organism="Methylobacterium indicum"
                     /mol_type="genomic DNA"
                     /strain="SE2.11"
                     /isolation_source="rice"
                     /type_material="type strain of Methylobacterium indicum"
                     /db_xref="taxon:1775910"
                     /geo_loc_name="India"
                     /collection_date="2013"
WGS         JTHF01000001-JTHF01000506
WGS_SCAFLD  NZ_JTHF01000001-NZ_JTHF01000506
//
LOCUS       NZ_JWNJ01000000      2087486 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria meningitidis strain Nm360601, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JWNJ00000000
VERSION     NZ_JWNJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03267140
            Assembly: GCF_003995515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2087486)
  AUTHORS   Zhu,B.
  TITLE     Subtyping of N. meningitidis based on genome sequence
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2087486)
  AUTHORS   Zhu,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2014) Department of Respiratory Infectious
            Diseases, National Institute for Communicable Disease Control and
            Prevention, Chinese Center for Disease Control and Prevention, 155,
            Changbai Road, Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWNJ00000000.1.
            The Neisseria meningitidis whole genome shotgun (WGS) project has
            the project accession NZ_JWNJ00000000.  This version of the project
            (01) has the accession number NZ_JWNJ01000000, and consists of
            sequences JWNJ01000001-JWNJ01000095.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003995515.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:19:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,133
            CDSs (total)                      :: 2,070
            Genes (coding)                    :: 1,901
            CDSs (with protein)               :: 1,901
            Genes (RNA)                       :: 63
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 169
            CDSs (without protein)            :: 169
            Pseudo Genes (ambiguous residues) :: 0 of 169
            Pseudo Genes (frameshifted)       :: 59 of 169
            Pseudo Genes (incomplete)         :: 124 of 169
            Pseudo Genes (internal stop)      :: 18 of 169
            Pseudo Genes (multiple problems)  :: 29 of 169
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087486
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /strain="Nm360601"
                     /isolation_source="Cerebro-Spinal Fluid"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="China: Jiangxi province"
                     /lat_lon="28.7 N 115.9 E"
                     /collection_date="2006-01-01"
                     /collected_by="Jiangxi CDC"
WGS         JWNJ01000001-JWNJ01000095
WGS_SCAFLD  NZ_JWNJ01000001-NZ_JWNJ01000095
//
LOCUS       NZ_VDHP01000000      4149829 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Morganella morganii strain SCsl4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VDHP00000000
VERSION     NZ_VDHP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11928022
            Assembly: GCF_009822545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Morganella morganii (Proteus morganii)
  ORGANISM  Morganella morganii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Morganella.
REFERENCE   1  (bases 1 to 4149829)
  AUTHORS   Yang,Y. and Zhang,A.
  TITLE     Genomic diversity of mcr-1-carrying bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4149829)
  AUTHORS   Yang,Y. and Zhang,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-JUN-2019) College of Life Science, Sichuan
            University, No. 24 South Section 1, Yihuan Road, Chengdu, Sichuan
            610065, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VDHP00000000.1.
            The Morganella morganii whole genome shotgun (WGS) project has the
            project accession NZ_VDHP00000000.  This version of the project
            (01) has the accession number NZ_VDHP01000000, and consists of
            sequences VDHP01000001-VDHP01000072.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: SPAdes v. 3.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009822545.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:39:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,013
            CDSs (total)                      :: 3,933
            Genes (coding)                    :: 3,854
            CDSs (with protein)               :: 3,854
            Genes (RNA)                       :: 80
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 1 (16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 18 of 79
            Pseudo Genes (incomplete)         :: 61 of 79
            Pseudo Genes (internal stop)      :: 11 of 79
            Pseudo Genes (multiple problems)  :: 11 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4149829
                     /organism="Morganella morganii"
                     /mol_type="genomic DNA"
                     /strain="SCsl4"
                     /isolation_source="liver"
                     /host="pig"
                     /db_xref="taxon:582"
WGS         VDHP01000001-VDHP01000072
WGS_SCAFLD  NZ_VDHP01000001-NZ_VDHP01000072
//
LOCUS       NZ_FNHS01000000      6013701 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methylobacterium phyllostachyos strain BL47, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNHS00000000
VERSION     NZ_FNHS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05216360
            Assembly: GCF_900103445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Methylobacterium phyllostachyos
  ORGANISM  Methylobacterium phyllostachyos
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNHS00000000.1.
            The Methylobacterium phyllostachyos whole genome shotgun (WGS)
            project has the project accession NZ_FNHS00000000.  This version of
            the project (01) has the accession number NZ_FNHS01000000, and
            consists of sequences FNHS01000001-FNHS01000047.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900103445.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:13:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,819
            CDSs (total)                      :: 5,758
            Genes (coding)                    :: 5,675
            CDSs (with protein)               :: 5,675
            Genes (RNA)                       :: 61
            rRNAs                             :: 4, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 83
            CDSs (without protein)            :: 83
            Pseudo Genes (ambiguous residues) :: 0 of 83
            Pseudo Genes (frameshifted)       :: 21 of 83
            Pseudo Genes (incomplete)         :: 67 of 83
            Pseudo Genes (internal stop)      :: 15 of 83
            Pseudo Genes (multiple problems)  :: 17 of 83
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6013701
                     /organism="Methylobacterium phyllostachyos"
                     /mol_type="genomic DNA"
                     /strain="BL47"
                     /type_material="type strain of Methylobacterium
                     phyllostachyos"
                     /db_xref="taxon:582672"
WGS         FNHS01000001-FNHS01000047
WGS_SCAFLD  NZ_FNHS01000001-NZ_FNHS01000047
//
LOCUS       NZ_JADIJO010000000   2372486 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micrococcus luteus strain SD226, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JADIJO000000000
VERSION     NZ_JADIJO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16555824
            Assembly: GCF_017355335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micrococcus luteus
  ORGANISM  Micrococcus luteus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
REFERENCE   1  (bases 1 to 2372486)
  AUTHORS   Wengert,P.C. and Savka,M.A.
  TITLE     Genomic characterization of underground lake bacteria from Wind
            Cave National Park: Insight into the archetypical LuxI/LuxR and
            identification of LuxR solos
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2372486)
  AUTHORS   Wengert,P.C. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-OCT-2020) Gosnell School of Life Sciences, Rochester
            Institute of Technology, 85 Lomb Memorial Dr., Rochester, NY 15623,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADIJO000000000.1.
            The Micrococcus luteus whole genome shotgun (WGS) project has the
            project accession NZ_JADIJO000000000.  This version of the project
            (01) has the accession number NZ_JADIJO010000000, and consists of
            sequences JADIJO010000001-JADIJO010000191.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from The Barton and/or Savka
            Laboratory.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 29-MAY-2019
            Assembly Method        :: Unicycler v. MAY-2019
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 113.46x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017355335.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:04:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,236
            CDSs (total)                      :: 2,183
            Genes (coding)                    :: 2,130
            CDSs (with protein)               :: 2,130
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 10 of 53
            Pseudo Genes (incomplete)         :: 43 of 53
            Pseudo Genes (internal stop)      :: 3 of 53
            Pseudo Genes (multiple problems)  :: 3 of 53
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2372486
                     /organism="Micrococcus luteus"
                     /mol_type="genomic DNA"
                     /strain="SD226"
                     /isolation_source="[ENVO:00005792]"
                     /db_xref="taxon:1270"
                     /geo_loc_name="USA: Wind Cave National Park, South Dakota"
                     /lat_lon="43.57 N 103.44 W"
                     /collection_date="2015"
WGS         JADIJO010000001-JADIJO010000191
WGS_SCAFLD  NZ_JADIJO010000001-NZ_JADIJO010000191
//
LOCUS       NZ_JAFDPH010000000   2662620 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Micrococcus luteus strain F5_7S_P1B, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAFDPH000000000
VERSION     NZ_JAFDPH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17570227
            Assembly: GCF_017167705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micrococcus luteus
  ORGANISM  Micrococcus luteus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
REFERENCE   1  (bases 1 to 2662620)
  AUTHORS   Venkateswaran,K.
  TITLE     Draft Genomes of Various Bacterial Phyla Isolated from the
            International Space Station
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2662620)
  AUTHORS   Venkateswaran,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-JAN-2021) Biotechnology and Planetary Protection
            Group, Jet Propulsion Laboratory, California Institute of
            Technology, 4800 Oak Grove Dr., Pasadena, CA 91109, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAFDPH000000000.1.
            The Micrococcus luteus whole genome shotgun (WGS) project has the
            project accession NZ_JAFDPH000000000.  This version of the project
            (01) has the accession number NZ_JAFDPH010000000, and consists of
            sequences JAFDPH010000001-JAFDPH010000163.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 717.058554706195x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017167705.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:09:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,615
            CDSs (total)                      :: 2,557
            Genes (coding)                    :: 2,484
            CDSs (with protein)               :: 2,484
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 4 (16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 73
            CDSs (without protein)            :: 73
            Pseudo Genes (ambiguous residues) :: 0 of 73
            Pseudo Genes (frameshifted)       :: 8 of 73
            Pseudo Genes (incomplete)         :: 70 of 73
            Pseudo Genes (internal stop)      :: 1 of 73
            Pseudo Genes (multiple problems)  :: 6 of 73
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2662620
                     /organism="Micrococcus luteus"
                     /mol_type="genomic DNA"
                     /strain="F5_7S_P1B"
                     /isolation_source="International Space Station during
                     MT-2"
                     /db_xref="taxon:1270"
                     /geo_loc_name="USA: International Space Station"
                     /collection_date="2018-01-05"
WGS         JAFDPH010000001-JAFDPH010000163
WGS_SCAFLD  NZ_JAFDPH010000001-NZ_JAFDPH010000163
//
LOCUS       NZ_FOBW01000000      4643093 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mesobacillus persicus strain B48,IBRC-M 10115,DSM 25386,CECT 8001,
            whole genome shotgun sequencing project.
ACCESSION   NZ_FOBW00000000
VERSION     NZ_FOBW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05192533
            Assembly: GCF_900109925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mesobacillus persicus
  ORGANISM  Mesobacillus persicus
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Mesobacillus.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOBW00000000.1.
            The Mesobacillus persicus whole genome shotgun (WGS) project has
            the project accession NZ_FOBW00000000.  This version of the project
            (01) has the accession number NZ_FOBW01000000, and consists of
            sequences FOBW01000001-FOBW01000040.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900109925.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:19:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,664
            CDSs (total)                      :: 4,512
            Genes (coding)                    :: 4,456
            CDSs (with protein)               :: 4,456
            Genes (RNA)                       :: 152
            rRNAs                             :: 15, 10, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 10 (5S)
            partial rRNAs                     :: 5, 10, 4 (5S, 16S, 23S)
            tRNAs                             :: 114
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 15 of 56
            Pseudo Genes (incomplete)         :: 41 of 56
            Pseudo Genes (internal stop)      :: 11 of 56
            Pseudo Genes (multiple problems)  :: 8 of 56
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4643093
                     /organism="Mesobacillus persicus"
                     /mol_type="genomic DNA"
                     /strain="B48,IBRC-M 10115,DSM 25386,CECT 8001"
                     /db_xref="taxon:930146"
WGS         FOBW01000001-FOBW01000040
WGS_SCAFLD  NZ_FOBW01000001-NZ_FOBW01000040
//
LOCUS       NZ_JADWUX010000000   2105918 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria gonorrhoeae strain 1582, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JADWUX000000000
VERSION     NZ_JADWUX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16967544
            Assembly: GCF_022575665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2105918)
  AUTHORS   Mitchev,N.
  TITLE     Neisseria gonorrhoeae genome sequencing and assembly
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2105918)
  AUTHORS   Mitchev,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-DEC-2020) Medical Microbiology, University of
            KwaZulu-Natal, 719 Umbilo Road, Durban, KwaZulu-Natal 4001, South
            Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADWUX000000000.1.
            The Neisseria gonorrhoeae whole genome shotgun (WGS) project has
            the project accession NZ_JADWUX000000000.  This version of the
            project (01) has the accession number NZ_JADWUX010000000, and
            consists of sequences JADWUX010000001-JADWUX010000148.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022575665.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:17:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,220
            CDSs (total)                      :: 2,169
            Genes (coding)                    :: 1,930
            CDSs (with protein)               :: 1,930
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 239
            CDSs (without protein)            :: 239
            Pseudo Genes (ambiguous residues) :: 0 of 239
            Pseudo Genes (frameshifted)       :: 117 of 239
            Pseudo Genes (incomplete)         :: 130 of 239
            Pseudo Genes (internal stop)      :: 39 of 239
            Pseudo Genes (multiple problems)  :: 45 of 239
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2105918
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /strain="1582"
                     /isolation_source="Vaginal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="South Africa: KwaZulu-Natal"
                     /lat_lon="29.8587 S 31.0218 E"
                     /collection_date="2016"
                     /collected_by="CAPRISA"
WGS         JADWUX010000001-JADWUX010000148
WGS_SCAFLD  NZ_JADWUX010000001-NZ_JADWUX010000148
//
LOCUS       NZ_JADWUL010000000   2173288 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria gonorrhoeae strain 1588, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JADWUL000000000
VERSION     NZ_JADWUL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16967556
            Assembly: GCF_022575435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2173288)
  AUTHORS   Mitchev,N.
  TITLE     Neisseria gonorrhoeae genome sequencing and assembly
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2173288)
  AUTHORS   Mitchev,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-DEC-2020) Medical Microbiology, University of
            KwaZulu-Natal, 719 Umbilo Road, Durban, KwaZulu-Natal 4001, South
            Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADWUL000000000.1.
            The Neisseria gonorrhoeae whole genome shotgun (WGS) project has
            the project accession NZ_JADWUL000000000.  This version of the
            project (01) has the accession number NZ_JADWUL010000000, and
            consists of sequences JADWUL010000001-JADWUL010000193.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022575435.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:15:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,304
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,015
            CDSs (with protein)               :: 2,015
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 238
            CDSs (without protein)            :: 238
            Pseudo Genes (ambiguous residues) :: 0 of 238
            Pseudo Genes (frameshifted)       :: 111 of 238
            Pseudo Genes (incomplete)         :: 135 of 238
            Pseudo Genes (internal stop)      :: 39 of 238
            Pseudo Genes (multiple problems)  :: 46 of 238
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2173288
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /strain="1588"
                     /isolation_source="Urethral"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="South Africa: KwaZulu-Natal"
                     /lat_lon="29.8587 S 31.0218 E"
                     /collection_date="2015"
                     /collected_by="NICD"
WGS         JADWUL010000001-JADWUL010000193
WGS_SCAFLD  NZ_JADWUL010000001-NZ_JADWUL010000193
//
LOCUS       NZ_JADWUD010000000   2111290 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria gonorrhoeae strain 1582, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JADWUD000000000
VERSION     NZ_JADWUD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16967589
            Assembly: GCF_022575235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2111290)
  AUTHORS   Mitchev,N.
  TITLE     Neisseria gonorrhoeae genome sequencing and assembly
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2111290)
  AUTHORS   Mitchev,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-DEC-2020) Medical Microbiology, University of
            KwaZulu-Natal, 719 Umbilo Road, Durban, KwaZulu-Natal 4001, South
            Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADWUD000000000.1.
            The Neisseria gonorrhoeae whole genome shotgun (WGS) project has
            the project accession NZ_JADWUD000000000.  This version of the
            project (01) has the accession number NZ_JADWUD010000000, and
            consists of sequences JADWUD010000001-JADWUD010000154.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022575235.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:17:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,223
            CDSs (total)                      :: 2,171
            Genes (coding)                    :: 1,933
            CDSs (with protein)               :: 1,933
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 238
            CDSs (without protein)            :: 238
            Pseudo Genes (ambiguous residues) :: 0 of 238
            Pseudo Genes (frameshifted)       :: 113 of 238
            Pseudo Genes (incomplete)         :: 130 of 238
            Pseudo Genes (internal stop)      :: 39 of 238
            Pseudo Genes (multiple problems)  :: 43 of 238
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2111290
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /strain="1582"
                     /isolation_source="Vaginal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="South Africa: KwaZulu-Natal"
                     /lat_lon="29.6006 S 30.3794 E"
                     /collection_date="2014"
                     /collected_by="UKZN"
WGS         JADWUD010000001-JADWUD010000154
WGS_SCAFLD  NZ_JADWUD010000001-NZ_JADWUD010000154
//
LOCUS       NZ_JADWUZ010000000   2160359 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria gonorrhoeae strain 1599, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JADWUZ000000000
VERSION     NZ_JADWUZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16967542
            Assembly: GCF_022575715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2160359)
  AUTHORS   Mitchev,N.
  TITLE     Neisseria gonorrhoeae genome sequencing and assembly
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2160359)
  AUTHORS   Mitchev,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-DEC-2020) Medical Microbiology, University of
            KwaZulu-Natal, 719 Umbilo Road, Durban, KwaZulu-Natal 4001, South
            Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADWUZ000000000.1.
            The Neisseria gonorrhoeae whole genome shotgun (WGS) project has
            the project accession NZ_JADWUZ000000000.  This version of the
            project (01) has the accession number NZ_JADWUZ010000000, and
            consists of sequences JADWUZ010000001-JADWUZ010000151.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022575715.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:18:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,279
            CDSs (total)                      :: 2,228
            Genes (coding)                    :: 1,991
            CDSs (with protein)               :: 1,991
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 237
            CDSs (without protein)            :: 237
            Pseudo Genes (ambiguous residues) :: 0 of 237
            Pseudo Genes (frameshifted)       :: 117 of 237
            Pseudo Genes (incomplete)         :: 129 of 237
            Pseudo Genes (internal stop)      :: 40 of 237
            Pseudo Genes (multiple problems)  :: 48 of 237
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2160359
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /strain="1599"
                     /isolation_source="Vaginal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="South Africa: KwaZulu-Natal"
                     /lat_lon="29.8587 S 31.0218 E"
                     /collection_date="2016"
                     /collected_by="CAPRISA"
WGS         JADWUZ010000001-JADWUZ010000151
WGS_SCAFLD  NZ_JADWUZ010000001-NZ_JADWUZ010000151
//
LOCUS       NZ_FMXM01000000      7061681 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mesorhizobium qingshengii strain CGMCC 1.12097, whole genome
            shotgun sequencing project.
ACCESSION   NZ_FMXM00000000
VERSION     NZ_FMXM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02927914
            Assembly: GCF_900103325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mesorhizobium qingshengii
  ORGANISM  Mesorhizobium qingshengii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FMXM00000000.1.
            The Mesorhizobium qingshengii whole genome shotgun (WGS) project
            has the project accession NZ_FMXM00000000.  This version of the
            project (01) has the accession number NZ_FMXM01000000, and consists
            of sequences FMXM01000001-FMXM01000121.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900103325.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:23:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,953
            CDSs (total)                      :: 6,893
            Genes (coding)                    :: 6,718
            CDSs (with protein)               :: 6,718
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 3 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 175
            CDSs (without protein)            :: 175
            Pseudo Genes (ambiguous residues) :: 0 of 175
            Pseudo Genes (frameshifted)       :: 59 of 175
            Pseudo Genes (incomplete)         :: 149 of 175
            Pseudo Genes (internal stop)      :: 14 of 175
            Pseudo Genes (multiple problems)  :: 41 of 175
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7061681
                     /organism="Mesorhizobium qingshengii"
                     /mol_type="genomic DNA"
                     /strain="CGMCC 1.12097"
                     /type_material="type strain of Mesorhizobium qingshengii"
                     /db_xref="taxon:1165689"
WGS         FMXM01000001-FMXM01000121
WGS_SCAFLD  NZ_FMXM01000001-NZ_FMXM01000121
//
LOCUS       NZ_JADWTK010000000   2165010 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria gonorrhoeae strain 12970, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JADWTK000000000
VERSION     NZ_JADWTK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16967599
            Assembly: GCF_022574895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2165010)
  AUTHORS   Mitchev,N.
  TITLE     Neisseria gonorrhoeae genome sequencing and assembly
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2165010)
  AUTHORS   Mitchev,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-DEC-2020) Medical Microbiology, University of
            KwaZulu-Natal, 719 Umbilo Road, Durban, KwaZulu-Natal 4001, South
            Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADWTK000000000.1.
            The Neisseria gonorrhoeae whole genome shotgun (WGS) project has
            the project accession NZ_JADWTK000000000.  This version of the
            project (01) has the accession number NZ_JADWTK010000000, and
            consists of sequences JADWTK010000001-JADWTK010000136.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022574895.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:16:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,280
            CDSs (total)                      :: 2,227
            Genes (coding)                    :: 1,987
            CDSs (with protein)               :: 1,987
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 240
            CDSs (without protein)            :: 240
            Pseudo Genes (ambiguous residues) :: 0 of 240
            Pseudo Genes (frameshifted)       :: 112 of 240
            Pseudo Genes (incomplete)         :: 131 of 240
            Pseudo Genes (internal stop)      :: 39 of 240
            Pseudo Genes (multiple problems)  :: 41 of 240
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2165010
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /strain="12970"
                     /isolation_source="Vaginal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="South Africa: KwaZulu-Natal"
                     /lat_lon="29.6006 S 30.3794 E"
                     /collection_date="2014"
                     /collected_by="UKZN"
WGS         JADWTK010000001-JADWTK010000136
WGS_SCAFLD  NZ_JADWTK010000001-NZ_JADWTK010000136
//
LOCUS       NZ_JADIAE010000000   3922960 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Morganella morganii subsp. morganii strain 1607-15304, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JADIAE000000000
VERSION     NZ_JADIAE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16534572
            Assembly: GCF_018475505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Morganella morganii subsp. morganii
  ORGANISM  Morganella morganii subsp. morganii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Morganella.
REFERENCE   1  (bases 1 to 3922960)
  AUTHORS   Zhou,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-OCT-2020) State Key Laboratory of Pathogen and
            Biosecurity, Beijing Institute of Microbiology and Epidemiology,
            No. 20, Dongdajie, Fengtai, Beijing 10071, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADIAE000000000.1.
            The Morganella morganii subsp. morganii whole genome shotgun (WGS)
            project has the project accession NZ_JADIAE000000000.  This version
            of the project (01) has the accession number NZ_JADIAE010000000,
            and consists of sequences JADIAE010000001-JADIAE010000053.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_018475505.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:19:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,780
            CDSs (total)                      :: 3,693
            Genes (coding)                    :: 3,619
            CDSs (with protein)               :: 3,619
            Genes (RNA)                       :: 87
            rRNAs                             :: 6, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 5, 4 (5S, 16S)
            tRNAs                             :: 72
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 29 of 74
            Pseudo Genes (incomplete)         :: 41 of 74
            Pseudo Genes (internal stop)      :: 12 of 74
            Pseudo Genes (multiple problems)  :: 8 of 74
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3922960
                     /organism="Morganella morganii subsp. morganii"
                     /mol_type="genomic DNA"
                     /strain="1607-15304"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /sub_species="morganii"
                     /db_xref="taxon:180434"
                     /geo_loc_name="China:Beijing"
                     /collection_date="2016"
WGS         JADIAE010000001-JADIAE010000053
WGS_SCAFLD  NZ_JADIAE010000001-NZ_JADIAE010000053
//
LOCUS       NZ_FOPM01000000      4523635 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methylobacterium gossipiicola strain Gh-105, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOPM00000000
VERSION     NZ_FOPM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05192565
            Assembly: GCF_900113485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Methylobacterium gossipiicola
  ORGANISM  Methylobacterium gossipiicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOPM00000000.1.
            The Methylobacterium gossipiicola whole genome shotgun (WGS)
            project has the project accession NZ_FOPM00000000.  This version of
            the project (01) has the accession number NZ_FOPM01000000, and
            consists of sequences FOPM01000001-FOPM01000077.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900113485.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:26:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,293
            CDSs (total)                      :: 4,232
            Genes (coding)                    :: 4,141
            CDSs (with protein)               :: 4,141
            Genes (RNA)                       :: 61
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 29 of 91
            Pseudo Genes (incomplete)         :: 73 of 91
            Pseudo Genes (internal stop)      :: 9 of 91
            Pseudo Genes (multiple problems)  :: 16 of 91
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4523635
                     /organism="Methylobacterium gossipiicola"
                     /mol_type="genomic DNA"
                     /strain="Gh-105"
                     /type_material="type strain of Methylobacterium
                     gossipiicola"
                     /db_xref="taxon:582675"
WGS         FOPM01000001-FOPM01000077
WGS_SCAFLD  NZ_FOPM01000001-NZ_FOPM01000077
//
LOCUS       NZ_JAGGIT010000000   4147699 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Morganella morganii strain MMM_59, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAGGIT000000000
VERSION     NZ_JAGGIT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14120147
            Assembly: GCF_017655285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Morganella morganii (Proteus morganii)
  ORGANISM  Morganella morganii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Morganella.
REFERENCE   1  (bases 1 to 4147699)
  AUTHORS   Tokajian,S., El Chaar,M. and El Khoury,M.
  TITLE     WGS of Carbapenem-Resistant Entrobacteriaceae
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4147699)
  AUTHORS   Tokajian,S., El Chaar,M. and El Khoury,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAR-2021) Natural Sciences, Lebanese American
            University, Blat, Byblos 36, Lebanon
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAGGIT000000000.1.
            The Morganella morganii whole genome shotgun (WGS) project has the
            project accession NZ_JAGGIT000000000.  This version of the project
            (01) has the accession number NZ_JAGGIT010000000, and consists of
            sequences JAGGIT010000001-JAGGIT010000072.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017655285.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:14:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,108
            CDSs (total)                      :: 4,008
            Genes (coding)                    :: 3,945
            CDSs (with protein)               :: 3,945
            Genes (RNA)                       :: 100
            rRNAs                             :: 9, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 1 (5S, 16S)
            partial rRNAs                     :: 5, 6 (16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 11 of 63
            Pseudo Genes (incomplete)         :: 56 of 63
            Pseudo Genes (internal stop)      :: 4 of 63
            Pseudo Genes (multiple problems)  :: 8 of 63
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4147699
                     /organism="Morganella morganii"
                     /mol_type="genomic DNA"
                     /strain="MMM_59"
                     /host="Homo sapiens"
                     /db_xref="taxon:582"
                     /geo_loc_name="Lebanon"
                     /collection_date="2018-11-06"
                     /collected_by="Mira El Chaar, Tamima El Jisr"
WGS         JAGGIT010000001-JAGGIT010000072
WGS_SCAFLD  NZ_JAGGIT010000001-NZ_JAGGIT010000072
//
LOCUS       NZ_JADIAN010000000   4079124 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Morganella morganii subsp. morganii strain HBZH72, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JADIAN000000000
VERSION     NZ_JADIAN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16534581
            Assembly: GCF_018475355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Morganella morganii subsp. morganii
  ORGANISM  Morganella morganii subsp. morganii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Morganella.
REFERENCE   1  (bases 1 to 4079124)
  AUTHORS   Zhou,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-OCT-2020) State Key Laboratory of Pathogen and
            Biosecurity, Beijing Institute of Microbiology and Epidemiology,
            No. 20, Dongdajie, Fengtai, Beijing 10071, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADIAN000000000.1.
            The Morganella morganii subsp. morganii whole genome shotgun (WGS)
            project has the project accession NZ_JADIAN000000000.  This version
            of the project (01) has the accession number NZ_JADIAN010000000,
            and consists of sequences JADIAN010000001-JADIAN010000087.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_018475355.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:19:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,994
            CDSs (total)                      :: 3,898
            Genes (coding)                    :: 3,825
            CDSs (with protein)               :: 3,825
            Genes (RNA)                       :: 96
            rRNAs                             :: 7, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 6, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 73
            CDSs (without protein)            :: 73
            Pseudo Genes (ambiguous residues) :: 0 of 73
            Pseudo Genes (frameshifted)       :: 20 of 73
            Pseudo Genes (incomplete)         :: 62 of 73
            Pseudo Genes (internal stop)      :: 12 of 73
            Pseudo Genes (multiple problems)  :: 17 of 73
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4079124
                     /organism="Morganella morganii subsp. morganii"
                     /mol_type="genomic DNA"
                     /strain="HBZH72"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /sub_species="morganii"
                     /db_xref="taxon:180434"
                     /geo_loc_name="China:Zunhua"
                     /collection_date="2017"
WGS         JADIAN010000001-JADIAN010000087
WGS_SCAFLD  NZ_JADIAN010000001-NZ_JADIAN010000087
//
LOCUS       NZ_FOSV01000000      5322408 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methylorubrum salsuginis strain CGMCC 1.6474, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOSV00000000
VERSION     NZ_FOSV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04488125
            Assembly: GCF_900114375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Methylorubrum salsuginis
  ORGANISM  Methylorubrum salsuginis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylorubrum.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOSV00000000.1.
            The Methylorubrum salsuginis whole genome shotgun (WGS) project has
            the project accession NZ_FOSV00000000.  This version of the project
            (01) has the accession number NZ_FOSV01000000, and consists of
            sequences FOSV01000001-FOSV01000064.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900114375.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:33:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,097
            CDSs (total)                      :: 5,036
            Genes (coding)                    :: 4,950
            CDSs (with protein)               :: 4,950
            Genes (RNA)                       :: 61
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 86
            CDSs (without protein)            :: 86
            Pseudo Genes (ambiguous residues) :: 0 of 86
            Pseudo Genes (frameshifted)       :: 41 of 86
            Pseudo Genes (incomplete)         :: 66 of 86
            Pseudo Genes (internal stop)      :: 18 of 86
            Pseudo Genes (multiple problems)  :: 32 of 86
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5322408
                     /organism="Methylorubrum salsuginis"
                     /mol_type="genomic DNA"
                     /strain="CGMCC 1.6474"
                     /type_material="type strain of Methylorubrum salsuginis"
                     /db_xref="taxon:414703"
WGS         FOSV01000001-FOSV01000064
WGS_SCAFLD  NZ_FOSV01000001-NZ_FOSV01000064
//
LOCUS       NZ_JADIAP010000000   3991062 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Morganella morganii subsp. morganii strain 1403-21150, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JADIAP000000000
VERSION     NZ_JADIAP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16534583
            Assembly: GCF_018475305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Morganella morganii subsp. morganii
  ORGANISM  Morganella morganii subsp. morganii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Morganella.
REFERENCE   1  (bases 1 to 3991062)
  AUTHORS   Zhou,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-OCT-2020) State Key Laboratory of Pathogen and
            Biosecurity, Beijing Institute of Microbiology and Epidemiology,
            No. 20, Dongdajie, Fengtai, Beijing 10071, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADIAP000000000.1.
            The Morganella morganii subsp. morganii whole genome shotgun (WGS)
            project has the project accession NZ_JADIAP000000000.  This version
            of the project (01) has the accession number NZ_JADIAP010000000,
            and consists of sequences JADIAP010000001-JADIAP010000066.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_018475305.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:24:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,865
            CDSs (total)                      :: 3,769
            Genes (coding)                    :: 3,702
            CDSs (with protein)               :: 3,702
            Genes (RNA)                       :: 96
            rRNAs                             :: 7, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 6, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 20 of 67
            Pseudo Genes (incomplete)         :: 55 of 67
            Pseudo Genes (internal stop)      :: 11 of 67
            Pseudo Genes (multiple problems)  :: 15 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3991062
                     /organism="Morganella morganii subsp. morganii"
                     /mol_type="genomic DNA"
                     /strain="1403-21150"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /sub_species="morganii"
                     /db_xref="taxon:180434"
                     /geo_loc_name="China:Beijing"
                     /collection_date="2014"
WGS         JADIAP010000001-JADIAP010000066
WGS_SCAFLD  NZ_JADIAP010000001-NZ_JADIAP010000066
//
LOCUS       NZ_JAKKEY010000000   4069999 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Morganella morganii strain 6-14, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAKKEY000000000
VERSION     NZ_JAKKEY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN24114869
            Assembly: GCF_026229025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Morganella morganii (Proteus morganii)
  ORGANISM  Morganella morganii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Morganella.
REFERENCE   1  (bases 1 to 4069999)
  AUTHORS   Hernandez-Garcia,M., Garcia-Castillo,M., Bou,G., Cercenado,E.,
            Delgado-Valverde,M., Oliver,A., Pitart,C., Rodriguez-Lozano,J.,
            Tormo,N., Melo-Cristino,J., Pinto,M.F., Goncalves,E., Alves,V.,
            Vieira,A.R., Ramalheira,E., Sancho,L., Diogo,J., Ferreira,R.,
            Cruz,H., Chaves,C., Duarte,J., Passaro,L., Diaz-Reganon,J. and
            Canton,R.
  TITLE     Imipenem-Relebactam Susceptibility in Enterobacterales Isolates
            Recovered from ICU Patients from Spain and Portugal (SUPERIOR and
            STEP Studies)
  JOURNAL   Microbiol Spectr 10 (5), e0292722 (2022)
   PUBMED   36043877
REFERENCE   2  (bases 1 to 4069999)
  AUTHORS   Hernandez-Garcia,M., Garcia-Castillo,M. and Canton,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2021) Microbiology, Hospital Universitario Ramon
            y Cajal (IRYCIS), Carretera de Colmenar Viejo Km 9.1, Madrid,
            Madrid 28034, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKKEY000000000.1.
            The Morganella morganii whole genome shotgun (WGS) project has the
            project accession NZ_JAKKEY000000000.  This version of the project
            (01) has the accession number NZ_JAKKEY010000000, and consists of
            sequences JAKKEY010000001-JAKKEY010000100.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. V3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 340x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_026229025.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:43:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,023
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,869
            CDSs (with protein)               :: 3,869
            Genes (RNA)                       :: 82
            rRNAs                             :: 3, 4, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 4, 6 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 72
            CDSs (without protein)            :: 72
            Pseudo Genes (ambiguous residues) :: 0 of 72
            Pseudo Genes (frameshifted)       :: 18 of 72
            Pseudo Genes (incomplete)         :: 60 of 72
            Pseudo Genes (internal stop)      :: 15 of 72
            Pseudo Genes (multiple problems)  :: 18 of 72
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4069999
                     /organism="Morganella morganii"
                     /mol_type="genomic DNA"
                     /strain="6-14"
                     /isolation_source="Urinary tract infection"
                     /host="Homo sapiens"
                     /db_xref="taxon:582"
                     /geo_loc_name="Spain:Madrid"
                     /collected_by="Hospital Universitario Ramon y Cajal"
WGS         JAKKEY010000001-JAKKEY010000100
WGS_SCAFLD  NZ_JAKKEY010000001-NZ_JAKKEY010000100
//
LOCUS       NZ_CAXEDT010000000   2157142 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria gonorrhoeae strain FF05-01-95 isolate FF05_01-95, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CAXEDT000000000
VERSION     NZ_CAXEDT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA114565898
            Sequence Read Archive: ERR12188080
            Assembly: GCF_963994875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2157142)
  AUTHORS   Kelvin,L.Sarenje., Marco van,Zwetselaar., Owen,Ngalamika.,
            Happiness,Kumburu., Margaret,C.Maimbolwa., Amon,Siame.,
            Sody,M.Munsaka. and Geoffrey,Kwenda.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2024) School of Health Sciences, University of
            Zambia, Lusaka, Zambia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAXEDT000000000.1.
            The Neisseria gonorrhoeae whole genome shotgun (WGS) project has
            the project accession NZ_CAXEDT000000000.  This version of the
            project (01) has the accession number NZ_CAXEDT010000000, and
            consists of sequences CAXEDT010000001-CAXEDT010000150.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_963994875.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:01:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,301
            CDSs (total)                      :: 2,250
            Genes (coding)                    :: 2,011
            CDSs (with protein)               :: 2,011
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 239
            CDSs (without protein)            :: 239
            Pseudo Genes (ambiguous residues) :: 0 of 239
            Pseudo Genes (frameshifted)       :: 111 of 239
            Pseudo Genes (incomplete)         :: 135 of 239
            Pseudo Genes (internal stop)      :: 42 of 239
            Pseudo Genes (multiple problems)  :: 47 of 239
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2157142
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /strain="FF05-01-95"
                     /isolate="FF05_01-95"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Zambia"
                     /collection_date="2020-04-20"
                     /collected_by="University Teaching Hospital"
WGS         CAXEDT010000001-CAXEDT010000150
WGS_SCAFLD  NZ_CAXEDT010000001-NZ_CAXEDT010000150
//
LOCUS       NZ_FNEE01000000      6808158 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mesorhizobium muleiense strain CGMCC 1.11022, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNEE00000000
VERSION     NZ_FNEE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05428953
            Assembly: GCF_900099905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mesorhizobium muleiense
  ORGANISM  Mesorhizobium muleiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNEE00000000.1.
            The Mesorhizobium muleiense whole genome shotgun (WGS) project has
            the project accession NZ_FNEE00000000.  This version of the project
            (01) has the accession number NZ_FNEE01000000, and consists of
            sequences FNEE01000001-FNEE01000061.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900099905.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:31:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,608
            CDSs (total)                      :: 6,549
            Genes (coding)                    :: 6,323
            CDSs (with protein)               :: 6,323
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4 (23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 226
            CDSs (without protein)            :: 226
            Pseudo Genes (ambiguous residues) :: 0 of 226
            Pseudo Genes (frameshifted)       :: 134 of 226
            Pseudo Genes (incomplete)         :: 153 of 226
            Pseudo Genes (internal stop)      :: 24 of 226
            Pseudo Genes (multiple problems)  :: 75 of 226
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6808158
                     /organism="Mesorhizobium muleiense"
                     /mol_type="genomic DNA"
                     /strain="CGMCC 1.11022"
                     /type_material="type strain of Mesorhizobium muleiense"
                     /db_xref="taxon:1004279"
WGS         FNEE01000001-FNEE01000061
WGS_SCAFLD  NZ_FNEE01000001-NZ_FNEE01000061
//
LOCUS       NZ_JBJZRA010000000   3823371 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Morganella morganii strain GK08, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJZRA000000000
VERSION     NZ_JBJZRA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45903630
            Assembly: GCF_049191105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Morganella morganii (Proteus morganii)
  ORGANISM  Morganella morganii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Morganella.
REFERENCE   1  (bases 1 to 3823371)
  AUTHORS   Zhang,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-DEC-2024) Department of Clinical Laboratory, Weifang
            People's Hospital, 151 Guangwen Street, Weifang 261041, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJZRA000000000.1.
            The Morganella morganii whole genome shotgun (WGS) project has the
            project accession NZ_JBJZRA000000000.  This version of the project
            (01) has the accession number NZ_JBJZRA010000000, and consists of
            sequences JBJZRA010000001-JBJZRA010000035.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049191105.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:45:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,630
            CDSs (total)                      :: 3,555
            Genes (coding)                    :: 3,511
            CDSs (with protein)               :: 3,511
            Genes (RNA)                       :: 75
            rRNAs                             :: 2, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 9 of 44
            Pseudo Genes (incomplete)         :: 36 of 44
            Pseudo Genes (internal stop)      :: 7 of 44
            Pseudo Genes (multiple problems)  :: 8 of 44
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3823371
                     /organism="Morganella morganii"
                     /mol_type="genomic DNA"
                     /strain="GK08"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:582"
                     /geo_loc_name="China: Shandong"
                     /lat_lon="36.62 N 119.00 E"
                     /collection_date="2021-09"
                     /collected_by="Cong Zhang"
WGS         JBJZRA010000001-JBJZRA010000035
WGS_SCAFLD  NZ_JBJZRA010000001-NZ_JBJZRA010000035
//
LOCUS       NZ_PZHF01000000      2874252 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mammaliicoccus sciuri strain SNUC 225, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PZHF00000000
VERSION     NZ_PZHF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06173117
            Assembly: GCF_003042195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (bases 1 to 2874252)
  AUTHORS   Naushad,S., Barkema,H.W., Luby,C., Condas,L.A., Nobrega,D.B.,
            Carson,D.A. and De Buck,J.
  TITLE     Comprehensive Phylogenetic Analysis of Bovine Non-aureus
            Staphylococci Species Based on Whole-Genome Sequencing
  JOURNAL   Front Microbiol 7, 1990 (2016)
   PUBMED   28066335
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2874252)
  AUTHORS   Naushad,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAR-2018) Production Animal Health, University of
            Calgary, 3330 Hospital Drive NW, Calgary, Alberta T2N 4N1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PZHF00000000.1.
            The Mammaliicoccus sciuri whole genome shotgun (WGS) project has
            the project accession NZ_PZHF00000000.  This version of the project
            (01) has the accession number NZ_PZHF01000000, and consists of
            sequences PZHF01000001-PZHF01000141.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 38x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003042195.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:43:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,962
            CDSs (total)                      :: 2,884
            Genes (coding)                    :: 2,839
            CDSs (with protein)               :: 2,839
            Genes (RNA)                       :: 78
            rRNAs                             :: 6, 7, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 6, 2 (16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 45
            CDSs (without protein)            :: 45
            Pseudo Genes (ambiguous residues) :: 0 of 45
            Pseudo Genes (frameshifted)       :: 8 of 45
            Pseudo Genes (incomplete)         :: 35 of 45
            Pseudo Genes (internal stop)      :: 5 of 45
            Pseudo Genes (multiple problems)  :: 3 of 45
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2874252
                     /organism="Mammaliicoccus sciuri"
                     /mol_type="genomic DNA"
                     /strain="SNUC 225"
                     /isolation_source="Herd 105"
                     /host="Bos taurus"
                     /db_xref="taxon:1296"
                     /geo_loc_name="Canada: Alberta"
                     /collection_date="2007-07-16"
                     /collected_by="Canadian Bovine Mastitis Research Network
                     (CBMRN)"
WGS         PZHF01000001-PZHF01000141
WGS_SCAFLD  NZ_PZHF01000001-NZ_PZHF01000141
//
LOCUS       NZ_JBXGGP010000000   2515507 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Moraxella bovis isolate OUG21, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGGP000000000
VERSION     NZ_JBXGGP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44800795
            Assembly: GCF_056854975.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Moraxella bovis (eye metagenome)
  ORGANISM  Moraxella bovis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 2515507)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Metagenome-assembled genomes from the bovine ocular surface
            microbiome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2515507)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGGP000000000.1.
            The Moraxella bovis whole genome shotgun (WGS) project has the
            project accession NZ_JBXGGP000000000.  This version of the project
            (01) has the accession number NZ_JBXGGP010000000, and consists of
            sequences JBXGGP010000001-JBXGGP010000180.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-FEB-2024
            Assembly Method        :: Megahit v. 1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 71.684x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854975.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:10:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,601
            CDSs (total)                      :: 2,560
            Genes (coding)                    :: 2,484
            CDSs (with protein)               :: 2,484
            Genes (RNA)                       :: 41
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 20 of 76
            Pseudo Genes (incomplete)         :: 50 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 5 of 76
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2515507
                     /organism="Moraxella bovis"
                     /mol_type="genomic DNA"
                     /isolate="OUG21"
                     /isolation_source="ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:476"
                     /environmental_sample
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2023"
                     /metagenome_source="eye metagenome"
                     /metagenomic
WGS         JBXGGP010000001-JBXGGP010000180
WGS_SCAFLD  NZ_JBXGGP010000001-NZ_JBXGGP010000180
//
LOCUS       NZ_JBXGGK010000000   1982950 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Moraxella bovoculi isolate OUG26, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGGK000000000
VERSION     NZ_JBXGGK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44800800
            Assembly: GCF_056854795.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Moraxella bovoculi (eye metagenome)
  ORGANISM  Moraxella bovoculi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 1982950)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Metagenome-assembled genomes from the bovine ocular surface
            microbiome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1982950)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGGK000000000.1.
            The Moraxella bovoculi whole genome shotgun (WGS) project has the
            project accession NZ_JBXGGK000000000.  This version of the project
            (01) has the accession number NZ_JBXGGK010000000, and consists of
            sequences JBXGGK010000001-JBXGGK010000110.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-FEB-2024
            Assembly Method        :: Megahit v. 1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 159.86305x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854795.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:14:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,965
            CDSs (total)                      :: 1,919
            Genes (coding)                    :: 1,867
            CDSs (with protein)               :: 1,867
            Genes (RNA)                       :: 46
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 38
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 23 of 52
            Pseudo Genes (incomplete)         :: 27 of 52
            Pseudo Genes (internal stop)      :: 16 of 52
            Pseudo Genes (multiple problems)  :: 12 of 52
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1982950
                     /organism="Moraxella bovoculi"
                     /mol_type="genomic DNA"
                     /isolate="OUG26"
                     /isolation_source="ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:386891"
                     /environmental_sample
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2023"
                     /metagenome_source="eye metagenome"
                     /metagenomic
WGS         JBXGGK010000001-JBXGGK010000110
WGS_SCAFLD  NZ_JBXGGK010000001-NZ_JBXGGK010000110
//
LOCUS       NZ_FOTK01000000      6845257 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methylobacterium pseudosasicola strain BL36, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOTK00000000
VERSION     NZ_FOTK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05192568
            Assembly: GCF_900114535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Methylobacterium pseudosasicola
  ORGANISM  Methylobacterium pseudosasicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOTK00000000.1.
            The Methylobacterium pseudosasicola whole genome shotgun (WGS)
            project has the project accession NZ_FOTK00000000.  This version of
            the project (01) has the accession number NZ_FOTK01000000, and
            consists of sequences FOTK01000001-FOTK01000129.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900114535.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:44:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,813
            CDSs (total)                      :: 6,752
            Genes (coding)                    :: 6,581
            CDSs (with protein)               :: 6,581
            Genes (RNA)                       :: 61
            rRNAs                             :: 3, 5, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1, 4, 3 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 171
            CDSs (without protein)            :: 171
            Pseudo Genes (ambiguous residues) :: 0 of 171
            Pseudo Genes (frameshifted)       :: 57 of 171
            Pseudo Genes (incomplete)         :: 112 of 171
            Pseudo Genes (internal stop)      :: 47 of 171
            Pseudo Genes (multiple problems)  :: 39 of 171
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6845257
                     /organism="Methylobacterium pseudosasicola"
                     /mol_type="genomic DNA"
                     /strain="BL36"
                     /type_material="type strain of Methylobacterium
                     pseudosasicola"
                     /db_xref="taxon:582667"
WGS         FOTK01000001-FOTK01000129
WGS_SCAFLD  NZ_FOTK01000001-NZ_FOTK01000129
//
LOCUS       NZ_JBXGGA010000000   1927070 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Moraxella bovoculi isolate OUG36, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGGA000000000
VERSION     NZ_JBXGGA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44800810
            Assembly: GCF_056854595.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Moraxella bovoculi (eye metagenome)
  ORGANISM  Moraxella bovoculi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 1927070)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Metagenome-assembled genomes from the bovine ocular surface
            microbiome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1927070)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGGA000000000.1.
            The Moraxella bovoculi whole genome shotgun (WGS) project has the
            project accession NZ_JBXGGA000000000.  This version of the project
            (01) has the accession number NZ_JBXGGA010000000, and consists of
            sequences JBXGGA010000001-JBXGGA010000092.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-FEB-2024
            Assembly Method        :: Megahit v. 1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 258.07462x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854595.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:14:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,977
            CDSs (total)                      :: 1,927
            Genes (coding)                    :: 1,864
            CDSs (with protein)               :: 1,864
            Genes (RNA)                       :: 50
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 25 of 63
            Pseudo Genes (incomplete)         :: 40 of 63
            Pseudo Genes (internal stop)      :: 15 of 63
            Pseudo Genes (multiple problems)  :: 14 of 63
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1927070
                     /organism="Moraxella bovoculi"
                     /mol_type="genomic DNA"
                     /isolate="OUG36"
                     /isolation_source="ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:386891"
                     /environmental_sample
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.85 W"
                     /collection_date="2023"
                     /metagenome_source="eye metagenome"
                     /metagenomic
WGS         JBXGGA010000001-JBXGGA010000092
WGS_SCAFLD  NZ_JBXGGA010000001-NZ_JBXGGA010000092
//
LOCUS       NZ_FOSN01000000      4105299 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methylocapsa palsarum strain NE2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_FOSN00000000
VERSION     NZ_FOSN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05444581
            Assembly: GCF_900114285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Methylocapsa palsarum
  ORGANISM  Methylocapsa palsarum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Beijerinckiaceae; Methylocapsa.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOSN00000000.1.
            The Methylocapsa palsarum whole genome shotgun (WGS) project has
            the project accession NZ_FOSN00000000.  This version of the project
            (01) has the accession number NZ_FOSN01000000, and consists of
            sequences FOSN01000001-FOSN01000078.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900114285.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:39:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,832
            CDSs (total)                      :: 3,780
            Genes (coding)                    :: 3,664
            CDSs (with protein)               :: 3,664
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 116
            CDSs (without protein)            :: 116
            Pseudo Genes (ambiguous residues) :: 0 of 116
            Pseudo Genes (frameshifted)       :: 47 of 116
            Pseudo Genes (incomplete)         :: 92 of 116
            Pseudo Genes (internal stop)      :: 6 of 116
            Pseudo Genes (multiple problems)  :: 28 of 116
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4105299
                     /organism="Methylocapsa palsarum"
                     /mol_type="genomic DNA"
                     /strain="NE2"
                     /type_material="type strain of Methylocapsa palsarum"
                     /db_xref="taxon:1612308"
WGS         FOSN01000001-FOSN01000078
WGS_SCAFLD  NZ_FOSN01000001-NZ_FOSN01000078
//
LOCUS       NZ_JBXGGT010000000   2335751 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Moraxella bovis isolate OUG17, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGGT000000000
VERSION     NZ_JBXGGT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44800791
            Assembly: GCF_056855115.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Moraxella bovis (eye metagenome)
  ORGANISM  Moraxella bovis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Moraxella.
REFERENCE   1  (bases 1 to 2335751)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Metagenome-assembled genomes from the bovine ocular surface
            microbiome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2335751)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGGT000000000.1.
            The Moraxella bovis whole genome shotgun (WGS) project has the
            project accession NZ_JBXGGT000000000.  This version of the project
            (01) has the accession number NZ_JBXGGT010000000, and consists of
            sequences JBXGGT010000001-JBXGGT010000220.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-FEB-2024
            Assembly Method        :: Megahit v. 1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 37.449432x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855115.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:17:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,401
            CDSs (total)                      :: 2,356
            Genes (coding)                    :: 2,267
            CDSs (with protein)               :: 2,267
            Genes (RNA)                       :: 45
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 89
            CDSs (without protein)            :: 89
            Pseudo Genes (ambiguous residues) :: 0 of 89
            Pseudo Genes (frameshifted)       :: 18 of 89
            Pseudo Genes (incomplete)         :: 66 of 89
            Pseudo Genes (internal stop)      :: 8 of 89
            Pseudo Genes (multiple problems)  :: 3 of 89
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2335751
                     /organism="Moraxella bovis"
                     /mol_type="genomic DNA"
                     /isolate="OUG17"
                     /isolation_source="ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:476"
                     /environmental_sample
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2022"
                     /metagenome_source="eye metagenome"
                     /metagenomic
WGS         JBXGGT010000001-JBXGGT010000220
WGS_SCAFLD  NZ_JBXGGT010000001-NZ_JBXGGT010000220
//
LOCUS       NZ_PZHH01000000      2836376 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mammaliicoccus sciuri strain SNUC 70, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PZHH00000000
VERSION     NZ_PZHH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06173114
            Assembly: GCF_003041935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (bases 1 to 2836376)
  AUTHORS   Naushad,S., Barkema,H.W., Luby,C., Condas,L.A., Nobrega,D.B.,
            Carson,D.A. and De Buck,J.
  TITLE     Comprehensive Phylogenetic Analysis of Bovine Non-aureus
            Staphylococci Species Based on Whole-Genome Sequencing
  JOURNAL   Front Microbiol 7, 1990 (2016)
   PUBMED   28066335
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2836376)
  AUTHORS   Naushad,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAR-2018) Production Animal Health, University of
            Calgary, 3330 Hospital Drive NW, Calgary, Alberta T2N 4N1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PZHH00000000.1.
            The Mammaliicoccus sciuri whole genome shotgun (WGS) project has
            the project accession NZ_PZHH00000000.  This version of the project
            (01) has the accession number NZ_PZHH01000000, and consists of
            sequences PZHH01000001-PZHH01000180.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 39x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003041935.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:44:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,947
            CDSs (total)                      :: 2,866
            Genes (coding)                    :: 2,812
            CDSs (with protein)               :: 2,812
            Genes (RNA)                       :: 81
            rRNAs                             :: 6, 6, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 16S)
            partial rRNAs                     :: 5, 7 (16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 6 of 54
            Pseudo Genes (incomplete)         :: 48 of 54
            Pseudo Genes (internal stop)      :: 4 of 54
            Pseudo Genes (multiple problems)  :: 4 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2836376
                     /organism="Mammaliicoccus sciuri"
                     /mol_type="genomic DNA"
                     /strain="SNUC 70"
                     /isolation_source="Herd 102"
                     /host="Bos taurus"
                     /db_xref="taxon:1296"
                     /geo_loc_name="Canada: Alberta"
                     /collection_date="2007-04-24"
                     /collected_by="Canadian Bovine Mastitis Research Network
                     (CBMRN)"
WGS         PZHH01000001-PZHH01000180
WGS_SCAFLD  NZ_PZHH01000001-NZ_PZHH01000180
//
LOCUS       NZ_JBXGJN010000000   2163308 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Micrococcus sp. isolate SUG3741, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGJN000000000
VERSION     NZ_JBXGJN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52836058
            Sequence Read Archive: SRR21357714
            Assembly: GCF_056857495.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Micrococcus sp. (milk metagenome)
  ORGANISM  Micrococcus sp.
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
REFERENCE   1  (bases 1 to 2163308)
  AUTHORS   Holman,D.B., Gzyl,K.E. and Kommadath,A.
  TITLE     Metagenome-assembled genomes from sow colostrum and milk
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2163308)
  AUTHORS   Holman,D.B., Gzyl,K.E. and Kommadath,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-NOV-2025) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGJN000000000.1.
            The Micrococcus sp. whole genome shotgun (WGS) project has the
            project accession NZ_JBXGJN000000000.  This version of the project
            (01) has the accession number NZ_JBXGJN010000000, and consists of
            sequences JBXGJN010000001-JBXGJN010000051.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v.1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 44.2x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056857495.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:21:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,989
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,910
            CDSs (with protein)               :: 1,910
            Genes (RNA)                       :: 54
            rRNAs                             :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2, 1 (5S, 16S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 25
            CDSs (without protein)            :: 25
            Pseudo Genes (ambiguous residues) :: 0 of 25
            Pseudo Genes (frameshifted)       :: 7 of 25
            Pseudo Genes (incomplete)         :: 19 of 25
            Pseudo Genes (internal stop)      :: 2 of 25
            Pseudo Genes (multiple problems)  :: 3 of 25
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2163308
                     /organism="Micrococcus sp."
                     /mol_type="genomic DNA"
                     /isolate="SUG3741"
                     /isolation_source="Colostrum"
                     /host="pig"
                     /db_xref="taxon:1271"
                     /environmental_sample
                     /geo_loc_name="Canada: Alberta, Lacombe"
                     /lat_lon="52.4685 N 113.7307 W"
                     /altitude="850 m"
                     /collection_date="2020"
                     /metagenome_source="milk metagenome"
                     /metagenomic
WGS         JBXGJN010000001-JBXGJN010000051
WGS_SCAFLD  NZ_JBXGJN010000001-NZ_JBXGJN010000051
//
LOCUS       NZ_FOPK01000000      6203179 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methylobacterium phyllosphaerae strain CBMB27, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOPK00000000
VERSION     NZ_FOPK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05192567
            Assembly: GCF_900113465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Methylobacterium phyllosphaerae
  ORGANISM  Methylobacterium phyllosphaerae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOPK00000000.1.
            The Methylobacterium phyllosphaerae whole genome shotgun (WGS)
            project has the project accession NZ_FOPK00000000.  This version of
            the project (01) has the accession number NZ_FOPK01000000, and
            consists of sequences FOPK01000001-FOPK01000081.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900113465.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:49:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,867
            CDSs (total)                      :: 5,807
            Genes (coding)                    :: 5,695
            CDSs (with protein)               :: 5,695
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 1 (16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 28 of 112
            Pseudo Genes (incomplete)         :: 83 of 112
            Pseudo Genes (internal stop)      :: 21 of 112
            Pseudo Genes (multiple problems)  :: 17 of 112
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6203179
                     /organism="Methylobacterium phyllosphaerae"
                     /mol_type="genomic DNA"
                     /strain="CBMB27"
                     /type_material="type strain of Methylobacterium
                     phyllosphaerae"
                     /db_xref="taxon:418223"
WGS         FOPK01000001-FOPK01000081
WGS_SCAFLD  NZ_FOPK01000001-NZ_FOPK01000081
//
LOCUS       NZ_QYIX01000000      2773622 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mammaliicoccus sciuri strain SNUC 2754, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QYIX00000000
VERSION     NZ_QYIX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06173134
            Assembly: GCF_003580375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (bases 1 to 2773622)
  AUTHORS   Naushad,S., Barkema,H.W., Luby,C., Condas,L.A., Nobrega,D.B.,
            Carson,D.A. and De Buck,J.
  TITLE     Comprehensive Phylogenetic Analysis of Bovine Non-aureus
            Staphylococci Species Based on Whole-Genome Sequencing
  JOURNAL   Front Microbiol 7, 1990 (2016)
   PUBMED   28066335
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2773622)
  AUTHORS   Naushad,S. and De Buck,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2018) Production Animal Health, University of
            Calgary, 3330 Hospital Drive NW, Calgary, Alberta T2N 4N1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QYIX00000000.1.
            The Mammaliicoccus sciuri whole genome shotgun (WGS) project has
            the project accession NZ_QYIX00000000.  This version of the project
            (01) has the accession number NZ_QYIX01000000, and consists of
            sequences QYIX01000001-QYIX01000187.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 34x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003580375.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:07:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,854
            CDSs (total)                      :: 2,774
            Genes (coding)                    :: 2,730
            CDSs (with protein)               :: 2,730
            Genes (RNA)                       :: 80
            rRNAs                             :: 6, 7, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 16S)
            partial rRNAs                     :: 6, 5 (16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 6 of 44
            Pseudo Genes (incomplete)         :: 39 of 44
            Pseudo Genes (internal stop)      :: 4 of 44
            Pseudo Genes (multiple problems)  :: 4 of 44
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2773622
                     /organism="Mammaliicoccus sciuri"
                     /mol_type="genomic DNA"
                     /strain="SNUC 2754"
                     /isolation_source="Herd 408"
                     /host="Bos taurus"
                     /db_xref="taxon:1296"
                     /geo_loc_name="Canada: Atlantic"
                     /collection_date="2007-06-28"
                     /collected_by="Canadian Bovine Mastitis Research Network
                     (CBMRN)"
WGS         QYIX01000001-QYIX01000187
WGS_SCAFLD  NZ_QYIX01000001-NZ_QYIX01000187
//
LOCUS       NZ_FOQW01000000      5804978 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methylobacterium brachiatum strain 111MFTsu3.1M4, whole genome
            shotgun sequencing project.
ACCESSION   NZ_FOQW00000000
VERSION     NZ_FOQW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02799642
            Assembly: GCF_900113845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Methylobacterium brachiatum
  ORGANISM  Methylobacterium brachiatum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOQW00000000.1.
            The Methylobacterium brachiatum whole genome shotgun (WGS) project
            has the project accession NZ_FOQW00000000.  This version of the
            project (01) has the accession number NZ_FOQW01000000, and consists
            of sequences FOQW01000001-FOQW01000048.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900113845.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:11:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,628
            CDSs (total)                      :: 5,567
            Genes (coding)                    :: 5,499
            CDSs (with protein)               :: 5,499
            Genes (RNA)                       :: 61
            rRNAs                             :: 5, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 4, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 27 of 68
            Pseudo Genes (incomplete)         :: 43 of 68
            Pseudo Genes (internal stop)      :: 23 of 68
            Pseudo Genes (multiple problems)  :: 22 of 68
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5804978
                     /organism="Methylobacterium brachiatum"
                     /mol_type="genomic DNA"
                     /strain="111MFTsu3.1M4"
                     /db_xref="taxon:269660"
WGS         FOQW01000001-FOQW01000048
WGS_SCAFLD  NZ_FOQW01000001-NZ_FOQW01000048
//
LOCUS       NZ_QYJG01000000      2704874 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mammaliicoccus sciuri strain SNUC 275, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QYJG00000000
VERSION     NZ_QYJG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06173118
            Assembly: GCF_003579605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (bases 1 to 2704874)
  AUTHORS   Naushad,S., Barkema,H.W., Luby,C., Condas,L.A., Nobrega,D.B.,
            Carson,D.A. and De Buck,J.
  TITLE     Comprehensive Phylogenetic Analysis of Bovine Non-aureus
            Staphylococci Species Based on Whole-Genome Sequencing
  JOURNAL   Front Microbiol 7, 1990 (2016)
   PUBMED   28066335
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2704874)
  AUTHORS   Naushad,S. and De Buck,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2018) Production Animal Health, University of
            Calgary, 3330 Hospital Drive NW, Calgary, Alberta T2N 4N1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QYJG00000000.1.
            The Mammaliicoccus sciuri whole genome shotgun (WGS) project has
            the project accession NZ_QYJG00000000.  This version of the project
            (01) has the accession number NZ_QYJG01000000, and consists of
            sequences QYJG01000001-QYJG01000148.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 46x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003579605.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:09:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,843
            CDSs (total)                      :: 2,759
            Genes (coding)                    :: 2,696
            CDSs (with protein)               :: 2,696
            Genes (RNA)                       :: 84
            rRNAs                             :: 6, 10, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 9, 5 (16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 14 of 63
            Pseudo Genes (incomplete)         :: 47 of 63
            Pseudo Genes (internal stop)      :: 6 of 63
            Pseudo Genes (multiple problems)  :: 4 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2704874
                     /organism="Mammaliicoccus sciuri"
                     /mol_type="genomic DNA"
                     /strain="SNUC 275"
                     /isolation_source="Herd 103"
                     /host="Bos taurus"
                     /db_xref="taxon:1296"
                     /geo_loc_name="Canada: Alberta"
                     /collection_date="2008-08-26"
                     /collected_by="Canadian Bovine Mastitis Research Network
                     (CBMRN)"
WGS         QYJG01000001-QYJG01000148
WGS_SCAFLD  NZ_QYJG01000001-NZ_QYJG01000148
//
LOCUS       NZ_JAFERS010000000   2913542 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mammaliicoccus sciuri strain GDQ8D228P, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAFERS000000000
VERSION     NZ_JAFERS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17385726
            Assembly: GCF_016891325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (bases 1 to 2913542)
  AUTHORS   Chen,L.
  TITLE     cfr and optrA-positive Staphylococcus spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2913542)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2021) College of Veterinary Medicine, South China
            Agricultural University, Wushan, Guangzhou, Guangdong 510642, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAFERS000000000.1.
            The Mammaliicoccus sciuri whole genome shotgun (WGS) project has
            the project accession NZ_JAFERS000000000.  This version of the
            project (01) has the accession number NZ_JAFERS010000000, and
            consists of sequences JAFERS010000001-JAFERS010000107.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: CLC NGS Cell v. 10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1006x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_016891325.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:10:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,999
            CDSs (total)                      :: 2,944
            Genes (coding)                    :: 2,909
            CDSs (with protein)               :: 2,909
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 9 of 35
            Pseudo Genes (incomplete)         :: 23 of 35
            Pseudo Genes (internal stop)      :: 7 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2913542
                     /organism="Mammaliicoccus sciuri"
                     /mol_type="genomic DNA"
                     /strain="GDQ8D228P"
                     /isolation_source="environment"
                     /db_xref="taxon:1296"
                     /geo_loc_name="China: Guangdong"
                     /collection_date="2018-10-17"
WGS         JAFERS010000001-JAFERS010000107
WGS_SCAFLD  NZ_JAFERS010000001-NZ_JAFERS010000107
//
LOCUS       NZ_JALGXI010000000   2776705 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Mammaliicoccus sciuri strain GDQ20D70P_15, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JALGXI000000000
VERSION     NZ_JALGXI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27064487
            Assembly: GCF_022815045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (bases 1 to 2776705)
  AUTHORS   Egyir,B., Dsani,E., Owusu-Nyantakyi,C., Amuasi,G.R. and Owusu,F.A.
  TITLE     Genomic Analysis and Antimicrobial Resistance in Staphylococci
            Isolated from Livestock and Farm Attendants in Northern Ghana
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2776705)
  AUTHORS   Egyir,B., Dsani,E., Owusu-Nyantakyi,C., Amuasi,G.R. and Owusu,F.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAR-2022) Bacteriology, Noguchi Memorial Institute
            fir Medical Research, S Legon drive, Accra 00233, Ghana
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALGXI000000000.1.
            The Mammaliicoccus sciuri whole genome shotgun (WGS) project has
            the project accession NZ_JALGXI000000000.  This version of the
            project (01) has the accession number NZ_JALGXI010000000, and
            consists of sequences JALGXI010000001-JALGXI010000068.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 81x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022815045.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:22:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,772
            CDSs (total)                      :: 2,713
            Genes (coding)                    :: 2,676
            CDSs (with protein)               :: 2,676
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 8 of 37
            Pseudo Genes (incomplete)         :: 26 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 2 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2776705
                     /organism="Mammaliicoccus sciuri"
                     /mol_type="genomic DNA"
                     /strain="GDQ20D70P_15"
                     /isolation_source="nasal swab"
                     /host="Ovis aries"
                     /db_xref="taxon:1296"
                     /geo_loc_name="Ghana: Northern region"
                     /collection_date="2018"
WGS         JALGXI010000001-JALGXI010000068
WGS_SCAFLD  NZ_JALGXI010000001-NZ_JALGXI010000068
//
LOCUS       NZ_JBXGGE010000000    685976 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Mesomycoplasma bovoculi isolate OUG32, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGGE000000000
VERSION     NZ_JBXGGE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44800806
            Assembly: GCF_056854675.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Mesomycoplasma bovoculi (eye metagenome)
  ORGANISM  Mesomycoplasma bovoculi
            Bacteria; Bacillati; Mycoplasmatota; Mycoplasmoidales;
            Metamycoplasmataceae; Mesomycoplasma.
REFERENCE   1  (bases 1 to 685976)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Metagenome-assembled genomes from the bovine ocular surface
            microbiome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 685976)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGGE000000000.1.
            The Mesomycoplasma bovoculi whole genome shotgun (WGS) project has
            the project accession NZ_JBXGGE000000000.  This version of the
            project (01) has the accession number NZ_JBXGGE010000000, and
            consists of sequences JBXGGE010000001-JBXGGE010000068.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-FEB-2024
            Assembly Method        :: Megahit v. 1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 23.200474x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854675.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:04:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 648
            CDSs (total)                      :: 613
            Genes (coding)                    :: 593
            CDSs (with protein)               :: 593
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 30
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 1 of 20
            Pseudo Genes (incomplete)         :: 19 of 20
            Pseudo Genes (internal stop)      :: 0 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..685976
                     /organism="Mesomycoplasma bovoculi"
                     /mol_type="genomic DNA"
                     /isolate="OUG32"
                     /isolation_source="ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:45362"
                     /environmental_sample
                     /geo_loc_name="USA: Hillsboro"
                     /lat_lon="47.40 N 97.06 W"
                     /collection_date="2022"
                     /metagenome_source="eye metagenome"
                     /metagenomic
WGS         JBXGGE010000001-JBXGGE010000068
WGS_SCAFLD  NZ_JBXGGE010000001-NZ_JBXGGE010000068
//
LOCUS       NZ_JBXGGQ010000000    641313 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Mesomycoplasma bovoculi isolate OUG20, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGGQ000000000
VERSION     NZ_JBXGGQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44800794
            Assembly: GCF_056854955.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Mesomycoplasma bovoculi (eye metagenome)
  ORGANISM  Mesomycoplasma bovoculi
            Bacteria; Bacillati; Mycoplasmatota; Mycoplasmoidales;
            Metamycoplasmataceae; Mesomycoplasma.
REFERENCE   1  (bases 1 to 641313)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Metagenome-assembled genomes from the bovine ocular surface
            microbiome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 641313)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGGQ000000000.1.
            The Mesomycoplasma bovoculi whole genome shotgun (WGS) project has
            the project accession NZ_JBXGGQ000000000.  This version of the
            project (01) has the accession number NZ_JBXGGQ010000000, and
            consists of sequences JBXGGQ010000001-JBXGGQ010000047.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-FEB-2024
            Assembly Method        :: Megahit v. 1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 36.370148x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854955.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:02:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 599
            CDSs (total)                      :: 564
            Genes (coding)                    :: 545
            CDSs (with protein)               :: 545
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 29
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 19
            CDSs (without protein)            :: 19
            Pseudo Genes (ambiguous residues) :: 0 of 19
            Pseudo Genes (frameshifted)       :: 0 of 19
            Pseudo Genes (incomplete)         :: 16 of 19
            Pseudo Genes (internal stop)      :: 3 of 19
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..641313
                     /organism="Mesomycoplasma bovoculi"
                     /mol_type="genomic DNA"
                     /isolate="OUG20"
                     /isolation_source="ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:45362"
                     /environmental_sample
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2023"
                     /metagenome_source="eye metagenome"
                     /metagenomic
WGS         JBXGGQ010000001-JBXGGQ010000047
WGS_SCAFLD  NZ_JBXGGQ010000001-NZ_JBXGGQ010000047
//
LOCUS       NZ_JBXGGN010000000    672390 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Mesomycoplasma bovoculi isolate OUG23, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGGN000000000
VERSION     NZ_JBXGGN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44800797
            Assembly: GCF_056854915.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Mesomycoplasma bovoculi (eye metagenome)
  ORGANISM  Mesomycoplasma bovoculi
            Bacteria; Bacillati; Mycoplasmatota; Mycoplasmoidales;
            Metamycoplasmataceae; Mesomycoplasma.
REFERENCE   1  (bases 1 to 672390)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Metagenome-assembled genomes from the bovine ocular surface
            microbiome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 672390)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGGN000000000.1.
            The Mesomycoplasma bovoculi whole genome shotgun (WGS) project has
            the project accession NZ_JBXGGN000000000.  This version of the
            project (01) has the accession number NZ_JBXGGN010000000, and
            consists of sequences JBXGGN010000001-JBXGGN010000089.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-FEB-2024
            Assembly Method        :: Megahit v. 1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 18.020227x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854915.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:05:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 662
            CDSs (total)                      :: 626
            Genes (coding)                    :: 597
            CDSs (with protein)               :: 597
            Genes (RNA)                       :: 36
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 30
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 0 of 29
            Pseudo Genes (incomplete)         :: 27 of 29
            Pseudo Genes (internal stop)      :: 2 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..672390
                     /organism="Mesomycoplasma bovoculi"
                     /mol_type="genomic DNA"
                     /isolate="OUG23"
                     /isolation_source="ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:45362"
                     /environmental_sample
                     /geo_loc_name="USA: Hillsboro"
                     /lat_lon="47.40 N 97.06 W"
                     /collection_date="2022"
                     /metagenome_source="eye metagenome"
                     /metagenomic
WGS         JBXGGN010000001-JBXGGN010000089
WGS_SCAFLD  NZ_JBXGGN010000001-NZ_JBXGGN010000089
//
LOCUS       NZ_JBXGGG010000000    669555 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Mesomycoplasma bovoculi isolate OUG30, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGGG000000000
VERSION     NZ_JBXGGG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44800804
            Assembly: GCF_056854715.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Mesomycoplasma bovoculi (eye metagenome)
  ORGANISM  Mesomycoplasma bovoculi
            Bacteria; Bacillati; Mycoplasmatota; Mycoplasmoidales;
            Metamycoplasmataceae; Mesomycoplasma.
REFERENCE   1  (bases 1 to 669555)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Metagenome-assembled genomes from the bovine ocular surface
            microbiome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 669555)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGGG000000000.1.
            The Mesomycoplasma bovoculi whole genome shotgun (WGS) project has
            the project accession NZ_JBXGGG000000000.  This version of the
            project (01) has the accession number NZ_JBXGGG010000000, and
            consists of sequences JBXGGG010000001-JBXGGG010000042.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-FEB-2024
            Assembly Method        :: Megahit v. 1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 17.13651x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854715.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:05:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 625
            CDSs (total)                      :: 588
            Genes (coding)                    :: 571
            CDSs (with protein)               :: 571
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 17
            CDSs (without protein)            :: 17
            Pseudo Genes (ambiguous residues) :: 0 of 17
            Pseudo Genes (frameshifted)       :: 1 of 17
            Pseudo Genes (incomplete)         :: 16 of 17
            Pseudo Genes (internal stop)      :: 0 of 17
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..669555
                     /organism="Mesomycoplasma bovoculi"
                     /mol_type="genomic DNA"
                     /isolate="OUG30"
                     /isolation_source="ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:45362"
                     /environmental_sample
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2022"
                     /metagenome_source="eye metagenome"
                     /metagenomic
WGS         JBXGGG010000001-JBXGGG010000042
WGS_SCAFLD  NZ_JBXGGG010000001-NZ_JBXGGG010000042
//
LOCUS       NZ_JBXGGJ010000000    720292 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Mesomycoplasma bovoculi isolate OUG27, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGGJ000000000
VERSION     NZ_JBXGGJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44800801
            Assembly: GCF_056854755.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Mesomycoplasma bovoculi (eye metagenome)
  ORGANISM  Mesomycoplasma bovoculi
            Bacteria; Bacillati; Mycoplasmatota; Mycoplasmoidales;
            Metamycoplasmataceae; Mesomycoplasma.
REFERENCE   1  (bases 1 to 720292)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Metagenome-assembled genomes from the bovine ocular surface
            microbiome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 720292)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGGJ000000000.1.
            The Mesomycoplasma bovoculi whole genome shotgun (WGS) project has
            the project accession NZ_JBXGGJ000000000.  This version of the
            project (01) has the accession number NZ_JBXGGJ010000000, and
            consists of sequences JBXGGJ010000001-JBXGGJ010000035.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-FEB-2024
            Assembly Method        :: Megahit v. 1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 15.980508x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854755.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:05:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 624
            CDSs (total)                      :: 589
            Genes (coding)                    :: 580
            CDSs (with protein)               :: 580
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 29
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..720292
                     /organism="Mesomycoplasma bovoculi"
                     /mol_type="genomic DNA"
                     /isolate="OUG27"
                     /isolation_source="ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:45362"
                     /environmental_sample
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2022"
                     /metagenome_source="eye metagenome"
                     /metagenomic
WGS         JBXGGJ010000001-JBXGGJ010000035
WGS_SCAFLD  NZ_JBXGGJ010000001-NZ_JBXGGJ010000035
//
LOCUS       NZ_JBXGFZ010000000    756973 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Mesomycoplasma bovoculi isolate OUG37, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGFZ000000000
VERSION     NZ_JBXGFZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44800811
            Assembly: GCF_056854575.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Mesomycoplasma bovoculi (eye metagenome)
  ORGANISM  Mesomycoplasma bovoculi
            Bacteria; Bacillati; Mycoplasmatota; Mycoplasmoidales;
            Metamycoplasmataceae; Mesomycoplasma.
REFERENCE   1  (bases 1 to 756973)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Metagenome-assembled genomes from the bovine ocular surface
            microbiome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 756973)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGFZ000000000.1.
            The Mesomycoplasma bovoculi whole genome shotgun (WGS) project has
            the project accession NZ_JBXGFZ000000000.  This version of the
            project (01) has the accession number NZ_JBXGFZ010000000, and
            consists of sequence JBXGFZ010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-FEB-2024
            Assembly Method        :: Megahit v. 1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 68.9132x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854575.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:05:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 614
            CDSs (total)                      :: 578
            Genes (coding)                    :: 576
            CDSs (with protein)               :: 576
            Genes (RNA)                       :: 36
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 30
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 2
            CDSs (without protein)            :: 2
            Pseudo Genes (ambiguous residues) :: 0 of 2
            Pseudo Genes (frameshifted)       :: 0 of 2
            Pseudo Genes (incomplete)         :: 2 of 2
            Pseudo Genes (internal stop)      :: 0 of 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..756973
                     /organism="Mesomycoplasma bovoculi"
                     /mol_type="genomic DNA"
                     /isolate="OUG37"
                     /isolation_source="ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:45362"
                     /environmental_sample
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.85 W"
                     /collection_date="2023"
                     /metagenome_source="eye metagenome"
                     /metagenomic
WGS         JBXGFZ010000001
WGS_SCAFLD  NZ_JBXGFZ010000001
//
LOCUS       NZ_JBXGGH010000000    752162 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Mesomycoplasma bovoculi isolate OUG29, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGGH000000000
VERSION     NZ_JBXGGH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44800803
            Assembly: GCF_056854735.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Mesomycoplasma bovoculi (eye metagenome)
  ORGANISM  Mesomycoplasma bovoculi
            Bacteria; Bacillati; Mycoplasmatota; Mycoplasmoidales;
            Metamycoplasmataceae; Mesomycoplasma.
REFERENCE   1  (bases 1 to 752162)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Metagenome-assembled genomes from the bovine ocular surface
            microbiome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 752162)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGGH000000000.1.
            The Mesomycoplasma bovoculi whole genome shotgun (WGS) project has
            the project accession NZ_JBXGGH000000000.  This version of the
            project (01) has the accession number NZ_JBXGGH010000000, and
            consists of sequences JBXGGH010000001-JBXGGH010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-FEB-2024
            Assembly Method        :: Megahit v. 1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 74.47087x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854735.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:08:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 616
            CDSs (total)                      :: 580
            Genes (coding)                    :: 577
            CDSs (with protein)               :: 577
            Genes (RNA)                       :: 36
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 30
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 1 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 0 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..752162
                     /organism="Mesomycoplasma bovoculi"
                     /mol_type="genomic DNA"
                     /isolate="OUG29"
                     /isolation_source="ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:45362"
                     /environmental_sample
                     /geo_loc_name="USA: Sidney"
                     /lat_lon="47.71 N 104.16 W"
                     /collection_date="2022"
                     /metagenome_source="eye metagenome"
                     /metagenomic
WGS         JBXGGH010000001-JBXGGH010000003
WGS_SCAFLD  NZ_JBXGGH010000001-NZ_JBXGGH010000003
//
LOCUS       NZ_JASATS010000000   6859656 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Methylobacterium fujisawaense strain OTU100, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JASATS000000000
VERSION     NZ_JASATS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN33870861
            Assembly: GCF_038440435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Methylobacterium fujisawaense
  ORGANISM  Methylobacterium fujisawaense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1  (bases 1 to 6859656)
  AUTHORS   Li,Z.
  TITLE     Machine learning predicts microbial metabolic traits from genomes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6859656)
  AUTHORS   Li,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2023) Department of Ecology and Evolution, The
            University of Chicago, 1101 East 57th Street, Chicago, IL 60637,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JASATS000000000.1.
            The Methylobacterium fujisawaense whole genome shotgun (WGS)
            project has the project accession NZ_JASATS000000000.  This version
            of the project (01) has the accession number NZ_JASATS010000000,
            and consists of sequences JASATS010000001-JASATS010000317.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 29-APR-2022
            Assembly Method        :: Unicycler v. 0.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 214x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038440435.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:03:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,741
            CDSs (total)                      :: 6,681
            Genes (coding)                    :: 6,500
            CDSs (with protein)               :: 6,500
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 181
            CDSs (without protein)            :: 181
            Pseudo Genes (ambiguous residues) :: 0 of 181
            Pseudo Genes (frameshifted)       :: 46 of 181
            Pseudo Genes (incomplete)         :: 144 of 181
            Pseudo Genes (internal stop)      :: 34 of 181
            Pseudo Genes (multiple problems)  :: 38 of 181
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6859656
                     /organism="Methylobacterium fujisawaense"
                     /mol_type="genomic DNA"
                     /strain="OTU100"
                     /isolation_source="soil"
                     /db_xref="taxon:107400"
                     /geo_loc_name="USA: Meadowbrook Park, Urbana, IL"
                     /collection_date="2018-10-22"
                     /collected_by="Kaumudi H. Prabhakara"
WGS         JASATS010000001-JASATS010000317
WGS_SCAFLD  NZ_JASATS010000001-NZ_JASATS010000317
//
LOCUS       NZ_JBXGGF010000000    726380 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Mesomycoplasma sp. isolate OUG31, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGGF000000000
VERSION     NZ_JBXGGF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44800805
            Assembly: GCF_056854695.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Mesomycoplasma sp. (eye metagenome)
  ORGANISM  Mesomycoplasma sp.
            Bacteria; Bacillati; Mycoplasmatota; Mycoplasmoidales;
            Metamycoplasmataceae; Mesomycoplasma.
REFERENCE   1  (bases 1 to 726380)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Metagenome-assembled genomes from the bovine ocular surface
            microbiome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 726380)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGGF000000000.1.
            The Mesomycoplasma sp. whole genome shotgun (WGS) project has the
            project accession NZ_JBXGGF000000000.  This version of the project
            (01) has the accession number NZ_JBXGGF010000000, and consists of
            sequences JBXGGF010000001-JBXGGF010000010.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-FEB-2024
            Assembly Method        :: Megahit v. 1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 27.122774x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854695.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:09:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 594
            CDSs (total)                      :: 558
            Genes (coding)                    :: 556
            CDSs (with protein)               :: 556
            Genes (RNA)                       :: 36
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 30
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 2
            CDSs (without protein)            :: 2
            Pseudo Genes (ambiguous residues) :: 0 of 2
            Pseudo Genes (frameshifted)       :: 1 of 2
            Pseudo Genes (incomplete)         :: 2 of 2
            Pseudo Genes (internal stop)      :: 1 of 2
            Pseudo Genes (multiple problems)  :: 1 of 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..726380
                     /organism="Mesomycoplasma sp."
                     /mol_type="genomic DNA"
                     /isolate="OUG31"
                     /isolation_source="ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:2923354"
                     /environmental_sample
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.85 W"
                     /collection_date="2022"
                     /metagenome_source="eye metagenome"
                     /metagenomic
WGS         JBXGGF010000001-JBXGGF010000010
WGS_SCAFLD  NZ_JBXGGF010000001-NZ_JBXGGF010000010
//
LOCUS       NZ_JBXGGI010000000   2169942 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Mannheimia sp. isolate OUG28, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBXGGI000000000
VERSION     NZ_JBXGGI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44800802
            Assembly: GCF_056854775.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Mannheimia sp. (eye metagenome)
  ORGANISM  Mannheimia sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2169942)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Metagenome-assembled genomes from the bovine ocular surface
            microbiome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2169942)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGGI000000000.1.
            The Mannheimia sp. whole genome shotgun (WGS) project has the
            project accession NZ_JBXGGI000000000.  This version of the project
            (01) has the accession number NZ_JBXGGI010000000, and consists of
            sequences JBXGGI010000001-JBXGGI010000153.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-FEB-2024
            Assembly Method        :: Megahit v. 1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 11.830119x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854775.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:13:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,203
            CDSs (total)                      :: 2,153
            Genes (coding)                    :: 2,108
            CDSs (with protein)               :: 2,108
            Genes (RNA)                       :: 50
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 45
            CDSs (without protein)            :: 45
            Pseudo Genes (ambiguous residues) :: 0 of 45
            Pseudo Genes (frameshifted)       :: 2 of 45
            Pseudo Genes (incomplete)         :: 37 of 45
            Pseudo Genes (internal stop)      :: 7 of 45
            Pseudo Genes (multiple problems)  :: 1 of 45
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2169942
                     /organism="Mannheimia sp."
                     /mol_type="genomic DNA"
                     /isolate="OUG28"
                     /isolation_source="ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:2081794"
                     /environmental_sample
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2023"
                     /metagenome_source="eye metagenome"
                     /metagenomic
WGS         JBXGGI010000001-JBXGGI010000153
WGS_SCAFLD  NZ_JBXGGI010000001-NZ_JBXGGI010000153
//
LOCUS       NZ_CDTFHU010000000   2971464 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Microbacterium ginsengisoli isolate MarMAG_025908, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CDTFHU000000000
VERSION     NZ_CDTFHU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120697465
            Assembly: GCF_977317765.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Microbacterium ginsengisoli (marine metagenome)
  ORGANISM  Microbacterium ginsengisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (bases 1 to 2971464)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDTFHU000000000.1.
            The Microbacterium ginsengisoli whole genome shotgun (WGS) project
            has the project accession NZ_CDTFHU000000000.  This version of the
            project (01) has the accession number NZ_CDTFHU010000000, and
            consists of sequences CDTFHU010000001-CDTFHU010000236.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977317765.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:17:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,076
            CDSs (total)                      :: 3,002
            Genes (coding)                    :: 2,936
            CDSs (with protein)               :: 2,936
            Genes (RNA)                       :: 74
            rRNAs                             :: 1, 1 (5S, 16S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 68
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 6 of 66
            Pseudo Genes (incomplete)         :: 60 of 66
            Pseudo Genes (internal stop)      :: 1 of 66
            Pseudo Genes (multiple problems)  :: 1 of 66
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2971464
                     /organism="Microbacterium ginsengisoli"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_025908"
                     /db_xref="taxon:400772"
                     /environmental_sample
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDTFHU010000001-CDTFHU010000236
WGS_SCAFLD  NZ_CDTFHU010000001-NZ_CDTFHU010000236
//
LOCUS       NZ_CDSZIC010000000   3614622 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Mesonia oceanica isolate MarMAG_031953, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CDSZIC000000000
VERSION     NZ_CDSZIC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120697701
            Assembly: GCF_977277285.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Mesonia oceanica (marine metagenome)
  ORGANISM  Mesonia oceanica
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Mesonia.
REFERENCE   1  (bases 1 to 3614622)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDSZIC000000000.1.
            The Mesonia oceanica whole genome shotgun (WGS) project has the
            project accession NZ_CDSZIC000000000.  This version of the project
            (01) has the accession number NZ_CDSZIC010000000, and consists of
            sequences CDSZIC010000001-CDSZIC010000110.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977277285.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,319
            CDSs (total)                      :: 3,288
            Genes (coding)                    :: 3,250
            CDSs (with protein)               :: 3,250
            Genes (RNA)                       :: 31
            tRNAs                             :: 27
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 38
            CDSs (without protein)            :: 38
            Pseudo Genes (ambiguous residues) :: 0 of 38
            Pseudo Genes (frameshifted)       :: 12 of 38
            Pseudo Genes (incomplete)         :: 29 of 38
            Pseudo Genes (internal stop)      :: 3 of 38
            Pseudo Genes (multiple problems)  :: 5 of 38
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3614622
                     /organism="Mesonia oceanica"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_031953"
                     /db_xref="taxon:2687242"
                     /environmental_sample
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDSZIC010000001-CDSZIC010000110
WGS_SCAFLD  NZ_CDSZIC010000001-NZ_CDSZIC010000110
//
LOCUS       NZ_JBXGGX010000000    753345 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Mesomycoplasma bovoculi isolate OUG13, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBXGGX000000000
VERSION     NZ_JBXGGX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44800787
            Assembly: GCF_056855175.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Mesomycoplasma bovoculi (eye metagenome)
  ORGANISM  Mesomycoplasma bovoculi
            Bacteria; Bacillati; Mycoplasmatota; Mycoplasmoidales;
            Metamycoplasmataceae; Mesomycoplasma.
REFERENCE   1  (bases 1 to 753345)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Metagenome-assembled genomes from the bovine ocular surface
            microbiome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 753345)
  AUTHORS   Holman,D.B. and Amat,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2024) Lacombe Research and Development Centre,
            Agriculture and Agri-Food Canada, 6000 C & E Trail, Lacombe, AB T4L
            1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBXGGX000000000.1.
            The Mesomycoplasma bovoculi whole genome shotgun (WGS) project has
            the project accession NZ_JBXGGX000000000.  This version of the
            project (01) has the accession number NZ_JBXGGX010000000, and
            consists of sequences JBXGGX010000001-JBXGGX010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-FEB-2024
            Assembly Method        :: Megahit v. 1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30.960844x
            Sequencing Technology  :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056855175.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:31:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 617
            CDSs (total)                      :: 581
            Genes (coding)                    :: 576
            CDSs (with protein)               :: 576
            Genes (RNA)                       :: 36
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 30
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 2 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..753345
                     /organism="Mesomycoplasma bovoculi"
                     /mol_type="genomic DNA"
                     /isolate="OUG13"
                     /isolation_source="ocular surface"
                     /host="Bos taurus"
                     /db_xref="taxon:45362"
                     /environmental_sample
                     /geo_loc_name="USA: Fargo"
                     /lat_lon="46.91 N 96.83 W"
                     /collection_date="2023"
                     /metagenome_source="eye metagenome"
                     /metagenomic
WGS         JBXGGX010000001-JBXGGX010000004
WGS_SCAFLD  NZ_JBXGGX010000001-NZ_JBXGGX010000004
//
LOCUS       NZ_JBMDYJ010000000   4136409 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Marinobacter goseongensis isolate CL02, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBMDYJ000000000
VERSION     NZ_JBMDYJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47336962
            Sequence Read Archive: SRR32684189
            Assembly: GCF_056854255.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Marinobacter goseongensis (phytoplankton metagenome)
  ORGANISM  Marinobacter goseongensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 4136409)
  AUTHORS   Chaux,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2025) Division for Marine and Environmental
            Research, Institut Ruder Boskovic, Bijenicka cesta 54, Zagreb
            10000, Croatia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBMDYJ000000000.1.
            The Marinobacter goseongensis whole genome shotgun (WGS) project
            has the project accession NZ_JBMDYJ000000000.  This version of the
            project (01) has the accession number NZ_JBMDYJ010000000, and
            consists of sequence JBMDYJ010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 17-DEC-2023
            Assembly Method        :: flye v. 2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854255.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:37:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,863
            CDSs (total)                      :: 3,800
            Genes (coding)                    :: 3,665
            CDSs (with protein)               :: 3,665
            Genes (RNA)                       :: 63
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 135
            CDSs (without protein)            :: 135
            Pseudo Genes (ambiguous residues) :: 0 of 135
            Pseudo Genes (frameshifted)       :: 87 of 135
            Pseudo Genes (incomplete)         :: 51 of 135
            Pseudo Genes (internal stop)      :: 7 of 135
            Pseudo Genes (multiple problems)  :: 10 of 135
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4136409
                     /organism="Marinobacter goseongensis"
                     /mol_type="genomic DNA"
                     /isolate="CL02"
                     /isolation_source="non-axenic culture of Calcidiscuc
                     leptoporus; culture in laboratory conditions (artificial
                     sea water, growth chamber)"
                     /db_xref="taxon:453838"
                     /environmental_sample
                     /geo_loc_name="Puerto Rico: coast"
                     /lat_lon="17.93 N 67.05 W"
                     /collection_date="2023-05-04"
                     /metagenome_source="phytoplankton metagenome"
                     /metagenomic
WGS         JBMDYJ010000001
WGS_SCAFLD  NZ_JBMDYJ010000001
//
LOCUS       NZ_JBMDYI010000000   4443299 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Marinobacter adhaerens isolate CL01, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBMDYI000000000
VERSION     NZ_JBMDYI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47336961
            Sequence Read Archive: SRR32684189
            Assembly: GCF_056854285.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Marinobacter adhaerens (phytoplankton metagenome)
  ORGANISM  Marinobacter adhaerens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 4443299)
  AUTHORS   Chaux,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2025) Division for Marine and Environmental
            Research, Institut Ruder Boskovic, Bijenicka cesta 54, Zagreb
            10000, Croatia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBMDYI000000000.1.
            The Marinobacter adhaerens whole genome shotgun (WGS) project has
            the project accession NZ_JBMDYI000000000.  This version of the
            project (01) has the accession number NZ_JBMDYI010000000, and
            consists of sequence JBMDYI010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 17-DEC-2023
            Assembly Method        :: flye v. 2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 13x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056854285.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:37:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,198
            CDSs (total)                      :: 4,131
            Genes (coding)                    :: 4,038
            CDSs (with protein)               :: 4,038
            Genes (RNA)                       :: 67
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 93
            CDSs (without protein)            :: 93
            Pseudo Genes (ambiguous residues) :: 0 of 93
            Pseudo Genes (frameshifted)       :: 79 of 93
            Pseudo Genes (incomplete)         :: 15 of 93
            Pseudo Genes (internal stop)      :: 4 of 93
            Pseudo Genes (multiple problems)  :: 4 of 93
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4443299
                     /organism="Marinobacter adhaerens"
                     /mol_type="genomic DNA"
                     /isolate="CL01"
                     /isolation_source="non-axenic culture of Calcidiscuc
                     leptoporus; culture in laboratory conditions (artificial
                     sea water, growth chamber)"
                     /db_xref="taxon:1033846"
                     /environmental_sample
                     /geo_loc_name="Puerto Rico: coast"
                     /lat_lon="17.93 N 67.05 W"
                     /collection_date="2023-05-04"
                     /metagenome_source="phytoplankton metagenome"
                     /metagenomic
WGS         JBMDYI010000001
WGS_SCAFLD  NZ_JBMDYI010000001
//
LOCUS       NZ_LNTU01000000      5482214 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paramesorhizobium deserti strain A-3-E, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LNTU00000000
VERSION     NZ_LNTU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04280999
            Assembly: GCF_001558695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paramesorhizobium deserti
  ORGANISM  Paramesorhizobium deserti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Paramesorhizobium.
REFERENCE   1  (bases 1 to 5482214)
  AUTHORS   Lv,R., Yang,X., Fang,N., Song,Y., Luo,X., Guo,J., Peng,F., Yang,R.,
            Cui,Y., Fang,C. and Song,Y.
  TITLE     Draft Genome Sequence of 'Paramesorhizobium deserti' A-3-ET, a
            Strain Highly Resistant to Diverse beta-Lactam Antibiotics
  JOURNAL   Genome Announc 4 (2), e00311-16 (2016)
   PUBMED   27125485
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5482214)
  AUTHORS   Lv,R., Yang,X., Fang,N., Guo,J., Luo,X., Peng,F., Yang,R., Cui,Y.,
            Fang,C. and Song,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2015) State Key Laboratory of Pathogen and
            Biosecurity, Beijing Institute of Microbiology and Epidemiology,
            Dong Da Street 20, Feng Tai District, Beijing, Beijing 100071,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LNTU00000000.1.
            The Paramesorhizobium deserti whole genome shotgun (WGS) project
            has the project accession NZ_LNTU00000000.  This version of the
            project (01) has the accession number NZ_LNTU01000000, and consists
            of sequences LNTU01000001-LNTU01000041.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 1.06
            Genome Coverage       :: 160.4x
            Sequencing Technology :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001558695.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:59:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,256
            CDSs (total)                      :: 5,203
            Genes (coding)                    :: 5,053
            CDSs (with protein)               :: 5,053
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 150
            CDSs (without protein)            :: 150
            Pseudo Genes (ambiguous residues) :: 0 of 150
            Pseudo Genes (frameshifted)       :: 65 of 150
            Pseudo Genes (incomplete)         :: 107 of 150
            Pseudo Genes (internal stop)      :: 9 of 150
            Pseudo Genes (multiple problems)  :: 29 of 150
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5482214
                     /organism="Paramesorhizobium deserti"
                     /mol_type="genomic DNA"
                     /strain="A-3-E"
                     /isolation_source="environmental"
                     /type_material="type strain of Paramesorhizobium deserti"
                     /db_xref="taxon:1494590"
                     /geo_loc_name="China: Xinjiang"
                     /collection_date="2010-09"
WGS         LNTU01000001-LNTU01000041
WGS_SCAFLD  NZ_LNTU01000001-NZ_LNTU01000041
//
LOCUS       NZ_FNNA01000000      3588279 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paracoccus sanguinis strain DSM 29303, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNNA00000000
VERSION     NZ_FNNA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05444276
            Assembly: GCF_900106665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paracoccus sanguinis
  ORGANISM  Paracoccus sanguinis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paracoccus.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNNA00000000.1.
            The Paracoccus sanguinis whole genome shotgun (WGS) project has the
            project accession NZ_FNNA00000000.  This version of the project
            (01) has the accession number NZ_FNNA01000000, and consists of
            sequences FNNA01000001-FNNA01000021.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900106665.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:04:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,492
            CDSs (total)                      :: 3,439
            Genes (coding)                    :: 3,372
            CDSs (with protein)               :: 3,372
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 9 of 67
            Pseudo Genes (incomplete)         :: 59 of 67
            Pseudo Genes (internal stop)      :: 6 of 67
            Pseudo Genes (multiple problems)  :: 5 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3588279
                     /organism="Paracoccus sanguinis"
                     /mol_type="genomic DNA"
                     /strain="DSM 29303"
                     /type_material="type strain of Paracoccus sanguinis"
                     /db_xref="taxon:1545044"
WGS         FNNA01000001-FNNA01000021
WGS_SCAFLD  NZ_FNNA01000001-NZ_FNNA01000021
//
LOCUS       NZ_FNSR01000000      7115141 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paraburkholderia caballeronis strain TNe-841, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNSR00000000
VERSION     NZ_FNSR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05445871
            Assembly: GCF_900104845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paraburkholderia caballeronis
  ORGANISM  Paraburkholderia caballeronis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNSR00000000.1.
            The Paraburkholderia caballeronis whole genome shotgun (WGS)
            project has the project accession NZ_FNSR00000000.  This version of
            the project (01) has the accession number NZ_FNSR01000000, and
            consists of sequences FNSR01000001-FNSR01000003.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900104845.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:20:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,338
            CDSs (total)                      :: 6,259
            Genes (coding)                    :: 6,176
            CDSs (with protein)               :: 6,176
            Genes (RNA)                       :: 79
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 83
            CDSs (without protein)            :: 83
            Pseudo Genes (ambiguous residues) :: 0 of 83
            Pseudo Genes (frameshifted)       :: 23 of 83
            Pseudo Genes (incomplete)         :: 70 of 83
            Pseudo Genes (internal stop)      :: 5 of 83
            Pseudo Genes (multiple problems)  :: 14 of 83
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7115141
                     /organism="Paraburkholderia caballeronis"
                     /mol_type="genomic DNA"
                     /strain="TNe-841"
                     /type_material="type strain of Burkholderia caballeronis"
                     /db_xref="taxon:416943"
WGS         FNSR01000001-FNSR01000003
WGS_SCAFLD  NZ_FNSR01000001-NZ_FNSR01000003
//
LOCUS       NZ_FOPU01000000      3946204 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paracoccus aminovorans strain DSM 8537, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOPU00000000
VERSION     NZ_FOPU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04488021
            Assembly: GCF_900113565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paracoccus aminovorans
  ORGANISM  Paracoccus aminovorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paracoccus.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOPU00000000.1.
            The Paracoccus aminovorans whole genome shotgun (WGS) project has
            the project accession NZ_FOPU00000000.  This version of the project
            (01) has the accession number NZ_FOPU01000000, and consists of
            sequences FOPU01000001-FOPU01000093.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900113565.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:28:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,950
            CDSs (total)                      :: 3,896
            Genes (coding)                    :: 3,757
            CDSs (with protein)               :: 3,757
            Genes (RNA)                       :: 54
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 139
            CDSs (without protein)            :: 139
            Pseudo Genes (ambiguous residues) :: 0 of 139
            Pseudo Genes (frameshifted)       :: 48 of 139
            Pseudo Genes (incomplete)         :: 113 of 139
            Pseudo Genes (internal stop)      :: 16 of 139
            Pseudo Genes (multiple problems)  :: 34 of 139
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3946204
                     /organism="Paracoccus aminovorans"
                     /mol_type="genomic DNA"
                     /strain="DSM 8537"
                     /type_material="type strain of Paracoccus aminovorans"
                     /db_xref="taxon:34004"
WGS         FOPU01000001-FOPU01000093
WGS_SCAFLD  NZ_FOPU01000001-NZ_FOPU01000093
//
LOCUS       NZ_SCHX01000000      1948718 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pediococcus acidilactici strain L3-A, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SCHX00000000
VERSION     NZ_SCHX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10744158
            Assembly: GCF_004099705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pediococcus acidilactici
  ORGANISM  Pediococcus acidilactici
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Pediococcus; Pediococcus acidilactici group.
REFERENCE   1  (bases 1 to 1948718)
  AUTHORS   Ayala,D.I., Cook,P.W., Franco,J.G., Bugarel,M., Kottapalli,K.R.,
            Loneragan,G.H., Brashears,M. and Nightingale,K.
  TITLE     A systematic approach to identify and characterize the
            effectiveness and safety of novel probiotic strains to control
            foodborne pathogens along the food continuum through combined
            genotypic and phenotypic assays
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1948718)
  AUTHORS   Ayala,D.I., Cook,P.W., Franco,J.G., Bugarel,M., Kottapalli,K.R.,
            Loneragan,G.H., Brashears,M. and Nightingale,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JAN-2019) Animal and Food Sciences, Texas Tech
            University, 1008 Canton Ave, Lubbock, TX 79409, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SCHX00000000.1.
            The Pediococcus acidilactici whole genome shotgun (WGS) project has
            the project accession NZ_SCHX00000000.  This version of the project
            (01) has the accession number NZ_SCHX01000000, and consists of
            sequences SCHX01000001-SCHX01000016.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 11
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 140x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004099705.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:10:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,934
            CDSs (total)                      :: 1,867
            Genes (coding)                    :: 1,798
            CDSs (with protein)               :: 1,798
            Genes (RNA)                       :: 67
            rRNAs                             :: 4, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 32 of 69
            Pseudo Genes (incomplete)         :: 15 of 69
            Pseudo Genes (internal stop)      :: 25 of 69
            Pseudo Genes (multiple problems)  :: 3 of 69
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1948718
                     /organism="Pediococcus acidilactici"
                     /mol_type="genomic DNA"
                     /strain="L3-A"
                     /host="bovine"
                     /db_xref="taxon:1254"
                     /geo_loc_name="USA"
                     /collection_date="2013"
WGS         SCHX01000001-SCHX01000016
WGS_SCAFLD  NZ_SCHX01000001-NZ_SCHX01000016
//
LOCUS       NZ_MAPS01000000      2260244 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pasteurella multocida strain Pm731, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MAPS00000000
VERSION     NZ_MAPS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05281835
            Assembly: GCF_004286975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pasteurella multocida
  ORGANISM  Pasteurella multocida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Pasteurella.
REFERENCE   1  (bases 1 to 2260244)
  AUTHORS   Cao,P., Guo,D., Liu,J., Jiang,Q., Xu,Z. and Qu,L.
  TITLE     Genome-Wide Analyses Reveal Genes Subject to Positive Selection in
            Pasteurella multocida
  JOURNAL   Front Microbiol 8, 961 (2017)
   PUBMED   28611758
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2260244)
  AUTHORS   Guo,D., Cao,P. and Qu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JUN-2016) Division of Zoonosis, Harbin Veterinary
            Research Institute, 427 Maduan Street, Nanggang District, Harbin,
            Heilongjiang 150001, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MAPS00000000.1.
            The Pasteurella multocida whole genome shotgun (WGS) project has
            the project accession NZ_MAPS00000000.  This version of the project
            (01) has the accession number NZ_MAPS01000000, and consists of
            sequences MAPS01000001-MAPS01000014.
            Annotated using prokka 1.12-beta from
            https://github.com/tseemann/prokka.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. v2.04
            Genome Coverage       :: 493.0x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004286975.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:17:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,105
            CDSs (total)                      :: 2,024
            Genes (coding)                    :: 2,007
            CDSs (with protein)               :: 2,007
            Genes (RNA)                       :: 81
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 17
            CDSs (without protein)            :: 17
            Pseudo Genes (ambiguous residues) :: 0 of 17
            Pseudo Genes (frameshifted)       :: 8 of 17
            Pseudo Genes (incomplete)         :: 6 of 17
            Pseudo Genes (internal stop)      :: 3 of 17
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2260244
                     /organism="Pasteurella multocida"
                     /mol_type="genomic DNA"
                     /strain="Pm731"
                     /host="goose"
                     /db_xref="taxon:747"
WGS         MAPS01000001-MAPS01000014
WGS_SCAFLD  NZ_MAPS01000001-NZ_MAPS01000014
//
LOCUS       NZ_PPWM01000000      2223058 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pasteurella multocida strain HND12, whole genome shotgun sequencing
            project.
ACCESSION   NZ_PPWM00000000
VERSION     NZ_PPWM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08386619
            Assembly: GCF_013013425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pasteurella multocida
  ORGANISM  Pasteurella multocida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Pasteurella.
REFERENCE   1  (bases 1 to 2223058)
  AUTHORS   Peng,Z., Liang,W., Wang,F., Xu,Z., Xie,Z., Lian,Z., Hua,L.,
            Zhou,R., Chen,H. and Wu,B.
  TITLE     Genetic and Phylogenetic Characteristics of Pasteurella multocida
            Isolates From Different Host Species
  JOURNAL   Front Microbiol 9, 1408 (2018)
   PUBMED   29997608
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2223058)
  AUTHORS   Peng,Z. and Wu,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JAN-2018) College of Veterinary Medicine, Huazhong
            Agricultural University, No. 1 Shizishan Street, Wuhan, Hubei
            430070, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PPWM00000000.1.
            The Pasteurella multocida whole genome shotgun (WGS) project has
            the project accession NZ_PPWM00000000.  This version of the project
            (01) has the accession number NZ_PPWM01000000, and consists of
            sequences PPWM01000001-PPWM01000020.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Prof. Bin Wu lab at Huazhong
            Agricultural University in China.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 398.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013013425.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:36:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,111
            CDSs (total)                      :: 2,047
            Genes (coding)                    :: 2,027
            CDSs (with protein)               :: 2,027
            Genes (RNA)                       :: 64
            rRNAs                             :: 7, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 6 of 20
            Pseudo Genes (incomplete)         :: 10 of 20
            Pseudo Genes (internal stop)      :: 6 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2223058
                     /organism="Pasteurella multocida"
                     /mol_type="genomic DNA"
                     /strain="HND12"
                     /isolation_source="Tissue sample"
                     /host="pig"
                     /db_xref="taxon:747"
                     /geo_loc_name="China"
                     /lat_lon="29.01 N 108.21 E"
                     /collection_date="2017-12"
WGS         PPWM01000001-PPWM01000020
WGS_SCAFLD  NZ_PPWM01000001-NZ_PPWM01000020
//
LOCUS       NZ_PPWO01000000      2221531 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pasteurella multocida strain HND13, whole genome shotgun sequencing
            project.
ACCESSION   NZ_PPWO00000000
VERSION     NZ_PPWO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08386620
            Assembly: GCF_013013505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pasteurella multocida
  ORGANISM  Pasteurella multocida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Pasteurella.
REFERENCE   1  (bases 1 to 2221531)
  AUTHORS   Peng,Z., Liang,W., Wang,F., Xu,Z., Xie,Z., Lian,Z., Hua,L.,
            Zhou,R., Chen,H. and Wu,B.
  TITLE     Genetic and Phylogenetic Characteristics of Pasteurella multocida
            Isolates From Different Host Species
  JOURNAL   Front Microbiol 9, 1408 (2018)
   PUBMED   29997608
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2221531)
  AUTHORS   Peng,Z. and Wu,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JAN-2018) College of Veterinary Medicine, Huazhong
            Agricultural University, No. 1 Shizishan Street, Wuhan, Hubei
            430070, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PPWO00000000.1.
            The Pasteurella multocida whole genome shotgun (WGS) project has
            the project accession NZ_PPWO00000000.  This version of the project
            (01) has the accession number NZ_PPWO01000000, and consists of
            sequences PPWO01000001-PPWO01000020.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Prof. Bin Wu lab at Huazhong
            Agricultural University in China.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 344.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013013505.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:43:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,045
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 64
            rRNAs                             :: 7, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 6 of 20
            Pseudo Genes (incomplete)         :: 10 of 20
            Pseudo Genes (internal stop)      :: 6 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2221531
                     /organism="Pasteurella multocida"
                     /mol_type="genomic DNA"
                     /strain="HND13"
                     /isolation_source="Tissue sample"
                     /host="pig"
                     /db_xref="taxon:747"
                     /geo_loc_name="China"
                     /lat_lon="29.01 N 108.21 E"
                     /collection_date="2017-12"
WGS         PPWO01000001-PPWO01000020
WGS_SCAFLD  NZ_PPWO01000001-NZ_PPWO01000020
//
LOCUS       NZ_JAFMNV010000000   4931326 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain MM2021_7, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAFMNV000000000
VERSION     NZ_JAFMNV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN18203666
            Assembly: GCF_017348995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4931326)
  AUTHORS   Thyssen,L.A., Hartmann,R., Marshall,I. and Finster,K.
  TITLE     Draft genome sequence of Pantoea agglomerans MM2021_7
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4931326)
  AUTHORS   Thyssen,L.A., Hartmann,R., Marshall,I. and Finster,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAR-2021) Department of Biology, Aarhus University,
            Ny Munkegade 114-116, Aarhus C 8000, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAFMNV000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JAFMNV000000000.  This version of the project
            (01) has the accession number NZ_JAFMNV010000000, and consists of
            sequences JAFMNV010000001-JAFMNV010000056.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Kai Finster.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-FEB-2021
            Assembly Method        :: SPAdes v. 3.15.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 95.25x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017348995.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:17:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,672
            CDSs (total)                      :: 4,560
            Genes (coding)                    :: 4,493
            CDSs (with protein)               :: 4,493
            Genes (RNA)                       :: 112
            rRNAs                             :: 8, 6, 15 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 2, 6, 15 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 20 of 67
            Pseudo Genes (incomplete)         :: 50 of 67
            Pseudo Genes (internal stop)      :: 20 of 67
            Pseudo Genes (multiple problems)  :: 17 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4931326
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="MM2021_7"
                     /isolation_source="Soil"
                     /db_xref="taxon:549"
                     /geo_loc_name="Denmark: Aarhus"
                     /lat_lon="56.153543 N 10.187160 E"
                     /collection_date="2019-09"
WGS         JAFMNV010000001-JAFMNV010000056
WGS_SCAFLD  NZ_JAFMNV010000001-NZ_JAFMNV010000056
//
LOCUS       NZ_AGBR01000000      2057401 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria meningitidis Nm6756, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AGBR00000000
VERSION     NZ_AGBR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02471970
            Assembly: GCF_000240625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria meningitidis Nm6756
  ORGANISM  Neisseria meningitidis Nm6756
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2057401)
  AUTHORS   Hao,W., Ma,J.H., Warren,K., Tsang,R.S., Low,D.E., Jamieson,F.B. and
            Alexander,D.C.
  TITLE     Extensive genomic variation within clonal complexes of Neisseria
            meningitidis
  JOURNAL   Genome Biol Evol 3, 1406-1418 (2011)
   PUBMED   22084315
REFERENCE   2  (bases 1 to 2057401)
  AUTHORS   Hao,W., Ma,J.H., Warren,K., Low,D.E., Jamieson,F.B. and
            Alexander,D.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-AUG-2011) Department of Laboratory Medicine and
            Pathobiology, University of Toronto, 81 Resources Road, Toronto,
            Ontario M9P 3T1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AGBR00000000.1.
            The Neisseria meningitidis Nm6756 whole genome shotgun (WGS)
            project has the project accession NZ_AGBR00000000.  This version of
            the project (01) has the accession number NZ_AGBR01000000, and
            consists of sequences AGBR01000001-AGBR01000176.
            Source DNA and bacteria available from Public Health Laboratories,
            Public Health Ontario, Canada.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.3
            Genome Coverage       :: 40x
            Sequencing Technology :: 454 GS FLX
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000240625.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:24:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,129
            CDSs (total)                      :: 2,070
            Genes (coding)                    :: 1,899
            CDSs (with protein)               :: 1,899
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 171
            CDSs (without protein)            :: 171
            Pseudo Genes (ambiguous residues) :: 0 of 171
            Pseudo Genes (frameshifted)       :: 61 of 171
            Pseudo Genes (incomplete)         :: 119 of 171
            Pseudo Genes (internal stop)      :: 10 of 171
            Pseudo Genes (multiple problems)  :: 18 of 171
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2057401
                     /organism="Neisseria meningitidis Nm6756"
                     /mol_type="genomic DNA"
                     /strain="Nm6756"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:1079755"
                     /geo_loc_name="Canada: Ontario"
                     /collection_date="2008"
WGS         AGBR01000001-AGBR01000176
WGS_SCAFLD  NZ_AGBR01000001-NZ_AGBR01000176
//
LOCUS       NZ_MLLW01000000      2042748 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB241, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLLW00000000
VERSION     NZ_MLLW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297036
            Assembly: GCF_001867785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 2042748)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042748)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLLW00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLLW00000000.  This version of the project
            (01) has the accession number NZ_MLLW01000000, and consists of
            sequences MLLW01000001-MLLW01000393.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 51.81x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001867785.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:52:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,241
            CDSs (total)                      :: 2,178
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 63
            rRNAs                             :: 4, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 153
            CDSs (without protein)            :: 153
            Pseudo Genes (ambiguous residues) :: 0 of 153
            Pseudo Genes (frameshifted)       :: 15 of 153
            Pseudo Genes (incomplete)         :: 130 of 153
            Pseudo Genes (internal stop)      :: 13 of 153
            Pseudo Genes (multiple problems)  :: 5 of 153
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042748
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB241"
                     /isolation_source="SauvBlanc"
                     /db_xref="taxon:1247"
                     /geo_loc_name="Australia"
                     /collection_date="1996"
WGS         MLLW01000001-MLLW01000393
WGS_SCAFLD  NZ_MLLW01000001-NZ_MLLW01000393
//
LOCUS       NZ_JALKIT010000000   4985617 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea ananatis strain 1-8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JALKIT000000000
VERSION     NZ_JALKIT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27527474
            Assembly: GCF_029086185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea ananatis
  ORGANISM  Pantoea ananatis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea.
REFERENCE   1  (bases 1 to 4985617)
  AUTHORS   Myers,B.K., Shin,G.Y., Agarwal,G., Stice,S.P., Gitaitis,R.D.,
            Kvitko,B.H. and Dutta,B.
  TITLE     Genome-wide association and dissociation studies in Pantoea
            ananatis reveal potential virulence factors affecting Allium porrum
            and Allium fistulosum x Allium cepa hybrid
  JOURNAL   Front Microbiol 13, 1094155 (2023)
   PUBMED   36817114
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4985617)
  AUTHORS   Myers,B.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2022) Plant Pathology, University of Georgia,
            2806 Rebecca Rd, Tifton, GA 31794, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALKIT000000000.1.
            The Pantoea ananatis whole genome shotgun (WGS) project has the
            project accession NZ_JALKIT000000000.  This version of the project
            (01) has the accession number NZ_JALKIT010000000, and consists of
            sequences JALKIT010000001-JALKIT010000042.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 10-20x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029086185.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:44:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,634
            CDSs (total)                      :: 4,562
            Genes (coding)                    :: 4,487
            CDSs (with protein)               :: 4,487
            Genes (RNA)                       :: 72
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 53
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 30 of 76
            Pseudo Genes (incomplete)         :: 46 of 76
            Pseudo Genes (internal stop)      :: 20 of 76
            Pseudo Genes (multiple problems)  :: 19 of 76
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4985617
                     /organism="Pantoea ananatis"
                     /mol_type="genomic DNA"
                     /strain="1-8"
                     /host="thrips"
                     /db_xref="taxon:553"
                     /geo_loc_name="USA: Tift Co. GA"
                     /collection_date="2001"
WGS         JALKIT010000001-JALKIT010000042
WGS_SCAFLD  NZ_JALKIT010000001-NZ_JALKIT010000042
//
LOCUS       NZ_MLLF01000000      1842730 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB132, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLLF00000000
VERSION     NZ_MLLF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297019
            Assembly: GCF_001867555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 1842730)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1842730)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLLF00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLLF00000000.  This version of the project
            (01) has the accession number NZ_MLLF01000000, and consists of
            sequences MLLF01000001-MLLF01000153.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 57.20x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001867555.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:50:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,994
            CDSs (total)                      :: 1,929
            Genes (coding)                    :: 1,802
            CDSs (with protein)               :: 1,802
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 4, 5 (16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 127
            CDSs (without protein)            :: 127
            Pseudo Genes (ambiguous residues) :: 0 of 127
            Pseudo Genes (frameshifted)       :: 49 of 127
            Pseudo Genes (incomplete)         :: 64 of 127
            Pseudo Genes (internal stop)      :: 21 of 127
            Pseudo Genes (multiple problems)  :: 7 of 127
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1842730
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB132"
                     /isolation_source="Wine"
                     /db_xref="taxon:1247"
                     /geo_loc_name="Australia"
                     /collection_date="1970"
WGS         MLLF01000001-MLLF01000153
WGS_SCAFLD  NZ_MLLF01000001-NZ_MLLF01000153
//
LOCUS       NZ_JALKIQ010000000   5660052 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea ananatis strain 19-20, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JALKIQ000000000
VERSION     NZ_JALKIQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27527478
            Assembly: GCF_029086085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea ananatis
  ORGANISM  Pantoea ananatis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea.
REFERENCE   1  (bases 1 to 5660052)
  AUTHORS   Myers,B.K., Shin,G.Y., Agarwal,G., Stice,S.P., Gitaitis,R.D.,
            Kvitko,B.H. and Dutta,B.
  TITLE     Genome-wide association and dissociation studies in Pantoea
            ananatis reveal potential virulence factors affecting Allium porrum
            and Allium fistulosum x Allium cepa hybrid
  JOURNAL   Front Microbiol 13, 1094155 (2023)
   PUBMED   36817114
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5660052)
  AUTHORS   Myers,B.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2022) Plant Pathology, University of Georgia,
            2806 Rebecca Rd, Tifton, GA 31794, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALKIQ000000000.1.
            The Pantoea ananatis whole genome shotgun (WGS) project has the
            project accession NZ_JALKIQ000000000.  This version of the project
            (01) has the accession number NZ_JALKIQ010000000, and consists of
            sequences JALKIQ010000001-JALKIQ010000178.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 10-20x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029086085.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:55:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,426
            CDSs (total)                      :: 5,336
            Genes (coding)                    :: 5,203
            CDSs (with protein)               :: 5,203
            Genes (RNA)                       :: 90
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 67
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 93 of 133
            Pseudo Genes (internal stop)      :: 27 of 133
            Pseudo Genes (multiple problems)  :: 32 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5660052
                     /organism="Pantoea ananatis"
                     /mol_type="genomic DNA"
                     /strain="19-20"
                     /host="Verbena bonariensis"
                     /db_xref="taxon:553"
                     /geo_loc_name="USA: Tift Co. GA"
                     /collection_date="2019"
WGS         JALKIQ010000001-JALKIQ010000178
WGS_SCAFLD  NZ_JALKIQ010000001-NZ_JALKIQ010000178
//
LOCUS       NZ_FNNH01000000      3660956 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Nitrosomonas communis strain Nm110, whole genome shotgun sequencing
            project.
ACCESSION   NZ_FNNH00000000
VERSION     NZ_FNNH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05421882
            Assembly: GCF_900106545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Nitrosomonas communis
  ORGANISM  Nitrosomonas communis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNNH00000000.1.
            The Nitrosomonas communis whole genome shotgun (WGS) project has
            the project accession NZ_FNNH00000000.  This version of the project
            (01) has the accession number NZ_FNNH01000000, and consists of
            sequences FNNH01000001-FNNH01000148.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900106545.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:59:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,386
            CDSs (total)                      :: 3,339
            Genes (coding)                    :: 3,180
            CDSs (with protein)               :: 3,180
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 159
            CDSs (without protein)            :: 159
            Pseudo Genes (ambiguous residues) :: 0 of 159
            Pseudo Genes (frameshifted)       :: 68 of 159
            Pseudo Genes (incomplete)         :: 120 of 159
            Pseudo Genes (internal stop)      :: 33 of 159
            Pseudo Genes (multiple problems)  :: 54 of 159
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3660956
                     /organism="Nitrosomonas communis"
                     /mol_type="genomic DNA"
                     /strain="Nm110"
                     /db_xref="taxon:44574"
                     /geo_loc_name="Germany: Hamburg"
                     /lat_lon="53.5586 N 9.8611 E"
WGS         FNNH01000001-FNNH01000148
WGS_SCAFLD  NZ_FNNH01000001-NZ_FNNH01000148
//
LOCUS       NZ_MLLI01000000      2049442 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB136, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLLI00000000
VERSION     NZ_MLLI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297022
            Assembly: GCF_001867655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 2049442)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2049442)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLLI00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLLI00000000.  This version of the project
            (01) has the accession number NZ_MLLI01000000, and consists of
            sequences MLLI01000001-MLLI01000433.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 52.97x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001867655.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:00:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,286
            CDSs (total)                      :: 2,222
            Genes (coding)                    :: 2,060
            CDSs (with protein)               :: 2,060
            Genes (RNA)                       :: 64
            rRNAs                             :: 2, 4, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 7 (16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 162
            CDSs (without protein)            :: 162
            Pseudo Genes (ambiguous residues) :: 0 of 162
            Pseudo Genes (frameshifted)       :: 17 of 162
            Pseudo Genes (incomplete)         :: 140 of 162
            Pseudo Genes (internal stop)      :: 10 of 162
            Pseudo Genes (multiple problems)  :: 5 of 162
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2049442
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB136"
                     /isolation_source="Wine"
                     /db_xref="taxon:1247"
WGS         MLLI01000001-MLLI01000433
WGS_SCAFLD  NZ_MLLI01000001-NZ_MLLI01000433
//
LOCUS       NZ_MLNG01000000      1980493 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB436, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLNG00000000
VERSION     NZ_MLNG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297072
            Assembly: GCF_001868035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 1980493)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1980493)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLNG00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLNG00000000.  This version of the project
            (01) has the accession number NZ_MLNG01000000, and consists of
            sequences MLNG01000001-MLNG01000381.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 67.24x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001868035.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:00:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,275
            CDSs (total)                      :: 2,212
            Genes (coding)                    :: 2,002
            CDSs (with protein)               :: 2,002
            Genes (RNA)                       :: 63
            rRNAs                             :: 3, 5, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 5, 3 (16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 210
            CDSs (without protein)            :: 210
            Pseudo Genes (ambiguous residues) :: 0 of 210
            Pseudo Genes (frameshifted)       :: 45 of 210
            Pseudo Genes (incomplete)         :: 151 of 210
            Pseudo Genes (internal stop)      :: 22 of 210
            Pseudo Genes (multiple problems)  :: 8 of 210
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1980493
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB436"
                     /isolation_source="Red wine"
                     /db_xref="taxon:1247"
                     /geo_loc_name="Australia"
                     /collection_date="2002"
WGS         MLNG01000001-MLNG01000381
WGS_SCAFLD  NZ_MLNG01000001-NZ_MLNG01000381
//
LOCUS       NZ_MLLT01000000      1890057 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB216, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLLT00000000
VERSION     NZ_MLLT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297033
            Assembly: GCF_001867715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 1890057)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1890057)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLLT00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLLT00000000.  This version of the project
            (01) has the accession number NZ_MLLT01000000, and consists of
            sequences MLLT01000001-MLLT01000256.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 29.99x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001867715.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:55:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,048
            Genes (coding)                    :: 1,875
            CDSs (with protein)               :: 1,875
            Genes (RNA)                       :: 61
            rRNAs                             :: 3, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 173
            CDSs (without protein)            :: 173
            Pseudo Genes (ambiguous residues) :: 1 of 173
            Pseudo Genes (frameshifted)       :: 47 of 173
            Pseudo Genes (incomplete)         :: 104 of 173
            Pseudo Genes (internal stop)      :: 27 of 173
            Pseudo Genes (multiple problems)  :: 6 of 173
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1890057
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB216"
                     /isolation_source="Wine"
                     /db_xref="taxon:1247"
WGS         MLLT01000001-MLLT01000256
WGS_SCAFLD  NZ_MLLT01000001-NZ_MLLT01000256
//
LOCUS       NZ_JALKLF010000000   5601990 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea ananatis strain 99-31, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JALKLF000000000
VERSION     NZ_JALKLF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27527397
            Assembly: GCF_029086585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea ananatis
  ORGANISM  Pantoea ananatis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea.
REFERENCE   1  (bases 1 to 5601990)
  AUTHORS   Myers,B.K., Shin,G.Y., Agarwal,G., Stice,S.P., Gitaitis,R.D.,
            Kvitko,B.H. and Dutta,B.
  TITLE     Genome-wide association and dissociation studies in Pantoea
            ananatis reveal potential virulence factors affecting Allium porrum
            and Allium fistulosum x Allium cepa hybrid
  JOURNAL   Front Microbiol 13, 1094155 (2023)
   PUBMED   36817114
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5601990)
  AUTHORS   Myers,B.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2022) Plant Pathology, University of Georgia,
            2806 Rebecca Rd, Tifton, GA 31794, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALKLF000000000.1.
            The Pantoea ananatis whole genome shotgun (WGS) project has the
            project accession NZ_JALKLF000000000.  This version of the project
            (01) has the accession number NZ_JALKLF010000000, and consists of
            sequences JALKLF010000001-JALKLF010001467.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 10-20x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029086585.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:03:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,013
            CDSs (total)                      :: 5,919
            Genes (coding)                    :: 5,476
            CDSs (with protein)               :: 5,476
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2, 5 (16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 19
            Pseudo Genes (total)              :: 443
            CDSs (without protein)            :: 443
            Pseudo Genes (ambiguous residues) :: 0 of 443
            Pseudo Genes (frameshifted)       :: 57 of 443
            Pseudo Genes (incomplete)         :: 401 of 443
            Pseudo Genes (internal stop)      :: 36 of 443
            Pseudo Genes (multiple problems)  :: 41 of 443
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5601990
                     /organism="Pantoea ananatis"
                     /mol_type="genomic DNA"
                     /strain="99-31"
                     /host="Urochloa texana"
                     /db_xref="taxon:553"
                     /geo_loc_name="USA: Tattnal Co. GA"
                     /collection_date="1999"
WGS         JALKLF010000001-JALKLF010001467
WGS_SCAFLD  NZ_JALKLF010000001-NZ_JALKLF010001467
//
LOCUS       NZ_MLKU01000000      1891519 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB1118, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLKU00000000
VERSION     NZ_MLKU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297008
            Assembly: GCF_001867475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 1891519)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1891519)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLKU00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLKU00000000.  This version of the project
            (01) has the accession number NZ_MLKU01000000, and consists of
            sequences MLKU01000001-MLKU01000179.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 65.36x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001867475.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:58:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,076
            CDSs (total)                      :: 2,014
            Genes (coding)                    :: 1,853
            CDSs (with protein)               :: 1,853
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 161
            CDSs (without protein)            :: 161
            Pseudo Genes (ambiguous residues) :: 0 of 161
            Pseudo Genes (frameshifted)       :: 51 of 161
            Pseudo Genes (incomplete)         :: 91 of 161
            Pseudo Genes (internal stop)      :: 25 of 161
            Pseudo Genes (multiple problems)  :: 6 of 161
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1891519
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB1118"
                     /isolation_source="Wine"
                     /db_xref="taxon:1247"
WGS         MLKU01000001-MLKU01000179
WGS_SCAFLD  NZ_MLKU01000001-NZ_MLKU01000179
//
LOCUS       NZ_FNSL01000000      4352929 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Nitratireductor aquibiodomus strain ES.061, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNSL00000000
VERSION     NZ_FNSL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05216452
            Assembly: GCF_900105565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Nitratireductor aquibiodomus
  ORGANISM  Nitratireductor aquibiodomus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Nitratireductor.
REFERENCE   1  (bases 1 to 4352929)
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNSL00000000.1.
            The Nitratireductor aquibiodomus whole genome shotgun (WGS) project
            has the project accession NZ_FNSL00000000.  This version of the
            project (01) has the accession number NZ_FNSL01000000, and consists
            of sequences FNSL01000001-FNSL01000002.
            The organism was changed from 'Nitratireductor sp. ES.061' to
            'Nitratireductor aquibiodomus' in July  2020.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_900105565.1
            Current Name        :: Nitratireductor aquibiodomus
            Previous Name       :: Nitratireductor sp. ES.061
            Date Updated        :: 2020-07-30
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_000615975.1
            A1 Name             :: Nitratireductor aquibiodomus
            A1 ANI              :: 98.24%
            A1 Query Coverage   :: 92.08%
            A1 Subject Coverage :: 88.74%
            Analysis 2 (A2)     :: Query vs. NO-TYPE genome for previous name
            A2 Genome (subject) :: no-type
            A2 Name             :: Nitratireductor sp. ES.061
            A2 ANI              :: 0%
            A2 Query Coverage   :: 0%
            A2 Subject Coverage :: 0%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900105565.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:06:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,120
            CDSs (total)                      :: 4,062
            Genes (coding)                    :: 4,042
            CDSs (with protein)               :: 4,042
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 8 of 20
            Pseudo Genes (incomplete)         :: 14 of 20
            Pseudo Genes (internal stop)      :: 2 of 20
            Pseudo Genes (multiple problems)  :: 3 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4352929
                     /organism="Nitratireductor aquibiodomus"
                     /mol_type="genomic DNA"
                     /strain="ES.061"
                     /db_xref="taxon:204799"
WGS         FNSL01000001-FNSL01000002
WGS_SCAFLD  NZ_FNSL01000001-NZ_FNSL01000002
//
LOCUS       NZ_MLON01000000      1925569 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB683, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLON00000000
VERSION     NZ_MLON00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297105
            Assembly: GCF_001869065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 1925569)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1925569)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLON00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLON00000000.  This version of the project
            (01) has the accession number NZ_MLON01000000, and consists of
            sequences MLON01000001-MLON01000402.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 43.12x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001869065.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:10:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,185
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 1,969
            CDSs (with protein)               :: 1,969
            Genes (RNA)                       :: 71
            rRNAs                             :: 4, 4, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 3, 7 (16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 11 of 145
            Pseudo Genes (incomplete)         :: 127 of 145
            Pseudo Genes (internal stop)      :: 9 of 145
            Pseudo Genes (multiple problems)  :: 2 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1925569
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB683"
                     /isolation_source="PinotGris"
                     /db_xref="taxon:1247"
                     /geo_loc_name="Australia"
                     /collection_date="2009"
WGS         MLON01000001-MLON01000402
WGS_SCAFLD  NZ_MLON01000001-NZ_MLON01000402
//
LOCUS       NZ_JALKJU010000000   5523793 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea ananatis strain 18-5S, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JALKJU000000000
VERSION     NZ_JALKJU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27527442
            Assembly: GCF_029081385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea ananatis
  ORGANISM  Pantoea ananatis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea.
REFERENCE   1  (bases 1 to 5523793)
  AUTHORS   Myers,B.K., Shin,G.Y., Agarwal,G., Stice,S.P., Gitaitis,R.D.,
            Kvitko,B.H. and Dutta,B.
  TITLE     Genome-wide association and dissociation studies in Pantoea
            ananatis reveal potential virulence factors affecting Allium porrum
            and Allium fistulosum x Allium cepa hybrid
  JOURNAL   Front Microbiol 13, 1094155 (2023)
   PUBMED   36817114
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5523793)
  AUTHORS   Myers,B.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2022) Plant Pathology, University of Georgia,
            2806 Rebecca Rd, Tifton, GA 31794, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALKJU000000000.1.
            The Pantoea ananatis whole genome shotgun (WGS) project has the
            project accession NZ_JALKJU000000000.  This version of the project
            (01) has the accession number NZ_JALKJU010000000, and consists of
            sequences JALKJU010000001-JALKJU010001369.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 10-20x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029081385.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:01:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,843
            CDSs (total)                      :: 5,753
            Genes (coding)                    :: 5,359
            CDSs (with protein)               :: 5,359
            Genes (RNA)                       :: 90
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 21
            Pseudo Genes (total)              :: 394
            CDSs (without protein)            :: 394
            Pseudo Genes (ambiguous residues) :: 0 of 394
            Pseudo Genes (frameshifted)       :: 42 of 394
            Pseudo Genes (incomplete)         :: 360 of 394
            Pseudo Genes (internal stop)      :: 27 of 394
            Pseudo Genes (multiple problems)  :: 33 of 394
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5523793
                     /organism="Pantoea ananatis"
                     /mol_type="genomic DNA"
                     /strain="18-5S"
                     /host="Onion"
                     /db_xref="taxon:553"
                     /geo_loc_name="USA: Vidalia Region, GA"
                     /collection_date="2018"
WGS         JALKJU010000001-JALKJU010001369
WGS_SCAFLD  NZ_JALKJU010000001-NZ_JALKJU010001369
//
LOCUS       NZ_MLOM01000000      2054072 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB670, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLOM00000000
VERSION     NZ_MLOM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297104
            Assembly: GCF_001869055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 2054072)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054072)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLOM00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLOM00000000.  This version of the project
            (01) has the accession number NZ_MLOM01000000, and consists of
            sequences MLOM01000001-MLOM01000644.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 53.45x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001869055.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:05:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,419
            CDSs (total)                      :: 2,358
            Genes (coding)                    :: 2,155
            CDSs (with protein)               :: 2,155
            Genes (RNA)                       :: 61
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 203
            CDSs (without protein)            :: 203
            Pseudo Genes (ambiguous residues) :: 0 of 203
            Pseudo Genes (frameshifted)       :: 16 of 203
            Pseudo Genes (incomplete)         :: 180 of 203
            Pseudo Genes (internal stop)      :: 12 of 203
            Pseudo Genes (multiple problems)  :: 5 of 203
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054072
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB670"
                     /isolation_source="PinotGris"
                     /db_xref="taxon:1247"
                     /geo_loc_name="Australia"
                     /collection_date="2009"
WGS         MLOM01000001-MLOM01000644
WGS_SCAFLD  NZ_MLOM01000001-NZ_MLOM01000644
//
LOCUS       NZ_JALKJD010000000   5537528 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea ananatis strain 19-8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JALKJD000000000
VERSION     NZ_JALKJD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27527462
            Assembly: GCF_029086245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea ananatis
  ORGANISM  Pantoea ananatis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea.
REFERENCE   1  (bases 1 to 5537528)
  AUTHORS   Myers,B.K., Shin,G.Y., Agarwal,G., Stice,S.P., Gitaitis,R.D.,
            Kvitko,B.H. and Dutta,B.
  TITLE     Genome-wide association and dissociation studies in Pantoea
            ananatis reveal potential virulence factors affecting Allium porrum
            and Allium fistulosum x Allium cepa hybrid
  JOURNAL   Front Microbiol 13, 1094155 (2023)
   PUBMED   36817114
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5537528)
  AUTHORS   Myers,B.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2022) Plant Pathology, University of Georgia,
            2806 Rebecca Rd, Tifton, GA 31794, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALKJD000000000.1.
            The Pantoea ananatis whole genome shotgun (WGS) project has the
            project accession NZ_JALKJD000000000.  This version of the project
            (01) has the accession number NZ_JALKJD010000000, and consists of
            sequences JALKJD010000001-JALKJD010000202.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 10-20x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029086245.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:16:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,300
            CDSs (total)                      :: 5,208
            Genes (coding)                    :: 5,083
            CDSs (with protein)               :: 5,083
            Genes (RNA)                       :: 92
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 18
            Pseudo Genes (total)              :: 125
            CDSs (without protein)            :: 125
            Pseudo Genes (ambiguous residues) :: 0 of 125
            Pseudo Genes (frameshifted)       :: 41 of 125
            Pseudo Genes (incomplete)         :: 87 of 125
            Pseudo Genes (internal stop)      :: 28 of 125
            Pseudo Genes (multiple problems)  :: 28 of 125
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5537528
                     /organism="Pantoea ananatis"
                     /mol_type="genomic DNA"
                     /strain="19-8"
                     /host="Richardia scabra L."
                     /db_xref="taxon:553"
                     /geo_loc_name="USA: Tift Co. GA"
                     /collection_date="2019"
WGS         JALKJD010000001-JALKJD010000202
WGS_SCAFLD  NZ_JALKJD010000001-NZ_JALKJD010000202
//
LOCUS       NZ_JBMMFA010000000   2332022 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pasteurella multocida strain SCPM-O-B-15018 (k9 Chol), whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBMMFA000000000
VERSION     NZ_JBMMFA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN46257394
            Assembly: GCF_049364735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pasteurella multocida
  ORGANISM  Pasteurella multocida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Pasteurella.
REFERENCE   1  (bases 1 to 2332022)
  AUTHORS   Teymurazov,M.G., Kovalenko,I.M., Tazina,O.I., Solomentsev,V.I.,
            Kislichkina,A., Sizova,A. and Fursov,M.V.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JAN-2025) Science Department, SRCAMB, Building 1,
            Obolensk, Moscow region 142279, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBMMFA000000000.1.
            The Pasteurella multocida whole genome shotgun (WGS) project has
            the project accession NZ_JBMMFA000000000.  This version of the
            project (01) has the accession number NZ_JBMMFA010000000, and
            consists of sequences JBMMFA010000001-JBMMFA010000036.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v. 0.5.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 143.39x
            Sequencing Technology  :: MGISEQ-2000RS
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049364735.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:50:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,263
            CDSs (total)                      :: 2,204
            Genes (coding)                    :: 2,182
            CDSs (with protein)               :: 2,182
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 4 of 22
            Pseudo Genes (incomplete)         :: 17 of 22
            Pseudo Genes (internal stop)      :: 3 of 22
            Pseudo Genes (multiple problems)  :: 2 of 22
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2332022
                     /organism="Pasteurella multocida"
                     /mol_type="genomic DNA"
                     /strain="SCPM-O-B-15018 (k9 Chol)"
                     /isolation_source="upper respiratory tract"
                     /host="pig"
                     /db_xref="taxon:747"
                     /geo_loc_name="Russia: Belgorod region"
                     /collection_date="2024-02-21"
WGS         JBMMFA010000001-JBMMFA010000036
WGS_SCAFLD  NZ_JBMMFA010000001-NZ_JBMMFA010000036
//
LOCUS       NZ_MLOL01000000      2012947 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB663, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLOL00000000
VERSION     NZ_MLOL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297103
            Assembly: GCF_001869605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 2012947)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2012947)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLOL00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLOL00000000.  This version of the project
            (01) has the accession number NZ_MLOL01000000, and consists of
            sequences MLOL01000001-MLOL01000486.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 29.74x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001869605.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:07:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,261
            CDSs (total)                      :: 2,205
            Genes (coding)                    :: 2,053
            CDSs (with protein)               :: 2,053
            Genes (RNA)                       :: 56
            rRNAs                             :: 3, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 152
            CDSs (without protein)            :: 152
            Pseudo Genes (ambiguous residues) :: 0 of 152
            Pseudo Genes (frameshifted)       :: 16 of 152
            Pseudo Genes (incomplete)         :: 129 of 152
            Pseudo Genes (internal stop)      :: 10 of 152
            Pseudo Genes (multiple problems)  :: 3 of 152
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2012947
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB663"
                     /isolation_source="Viognier"
                     /db_xref="taxon:1247"
                     /geo_loc_name="Australia"
                     /collection_date="2009"
WGS         MLOL01000001-MLOL01000486
WGS_SCAFLD  NZ_MLOL01000001-NZ_MLOL01000486
//
LOCUS       NZ_MLLS01000000      1994379 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB215, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLLS00000000
VERSION     NZ_MLLS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297032
            Assembly: GCF_001868265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 1994379)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1994379)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLLS00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLLS00000000.  This version of the project
            (01) has the accession number NZ_MLLS01000000, and consists of
            sequences MLLS01000001-MLLS01000323.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 45.66x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001868265.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:08:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,298
            CDSs (total)                      :: 2,228
            Genes (coding)                    :: 2,035
            CDSs (with protein)               :: 2,035
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 6, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 1, 6, 8 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 193
            CDSs (without protein)            :: 193
            Pseudo Genes (ambiguous residues) :: 0 of 193
            Pseudo Genes (frameshifted)       :: 45 of 193
            Pseudo Genes (incomplete)         :: 129 of 193
            Pseudo Genes (internal stop)      :: 28 of 193
            Pseudo Genes (multiple problems)  :: 9 of 193
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1994379
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB215"
                     /isolation_source="Red wine"
                     /db_xref="taxon:1247"
                     /geo_loc_name="Australia"
                     /collection_date="1984"
WGS         MLLS01000001-MLLS01000323
WGS_SCAFLD  NZ_MLLS01000001-NZ_MLLS01000323
//
LOCUS       NZ_JBBJRS010000000   5003515 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 20ID0192, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJRS000000000
VERSION     NZ_JBBJRS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623793
            Assembly: GCF_049789395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 5003515)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5003515)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJRS000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJRS000000000.  This version of the project
            (01) has the accession number NZ_JBBJRS010000000, and consists of
            sequences JBBJRS010000001-JBBJRS010000046.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049789395.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:06:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,695
            CDSs (total)                      :: 4,622
            Genes (coding)                    :: 4,552
            CDSs (with protein)               :: 4,552
            Genes (RNA)                       :: 73
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 21 of 70
            Pseudo Genes (incomplete)         :: 54 of 70
            Pseudo Genes (internal stop)      :: 17 of 70
            Pseudo Genes (multiple problems)  :: 18 of 70
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5003515
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="20ID0192"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Idaho"
                     /collection_date="2020"
WGS         JBBJRS010000001-JBBJRS010000046
WGS_SCAFLD  NZ_JBBJRS010000001-NZ_JBBJRS010000046
//
LOCUS       NZ_MLMW01000000      1907744 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB394, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLMW00000000
VERSION     NZ_MLMW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297062
            Assembly: GCF_001867965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 1907744)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1907744)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLMW00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLMW00000000.  This version of the project
            (01) has the accession number NZ_MLMW01000000, and consists of
            sequences MLMW01000001-MLMW01000292.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 64.79x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001867965.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:06:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,154
            CDSs (total)                      :: 2,090
            Genes (coding)                    :: 1,919
            CDSs (with protein)               :: 1,919
            Genes (RNA)                       :: 64
            rRNAs                             :: 2, 6, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 6, 7 (16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 171
            CDSs (without protein)            :: 171
            Pseudo Genes (ambiguous residues) :: 0 of 171
            Pseudo Genes (frameshifted)       :: 42 of 171
            Pseudo Genes (incomplete)         :: 114 of 171
            Pseudo Genes (internal stop)      :: 22 of 171
            Pseudo Genes (multiple problems)  :: 7 of 171
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1907744
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB394"
                     /isolation_source="Red wine"
                     /db_xref="taxon:1247"
                     /geo_loc_name="Australia"
                     /collection_date="2001"
WGS         MLMW01000001-MLMW01000292
WGS_SCAFLD  NZ_MLMW01000001-NZ_MLMW01000292
//
LOCUS       NZ_JBBJSE010000000   4823506 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 20CO004, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBJSE000000000
VERSION     NZ_JBBJSE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623781
            Assembly: GCF_049789945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4823506)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4823506)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJSE000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJSE000000000.  This version of the project
            (01) has the accession number NZ_JBBJSE010000000, and consists of
            sequences JBBJSE010000001-JBBJSE010000042.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049789945.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:05:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,597
            CDSs (total)                      :: 4,493
            Genes (coding)                    :: 4,420
            CDSs (with protein)               :: 4,420
            Genes (RNA)                       :: 104
            rRNAs                             :: 7, 4, 13 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            partial rRNAs                     :: 2, 3, 13 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 73
            CDSs (without protein)            :: 73
            Pseudo Genes (ambiguous residues) :: 0 of 73
            Pseudo Genes (frameshifted)       :: 22 of 73
            Pseudo Genes (incomplete)         :: 59 of 73
            Pseudo Genes (internal stop)      :: 23 of 73
            Pseudo Genes (multiple problems)  :: 23 of 73
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4823506
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="20CO004"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Colorado"
                     /collection_date="2020"
WGS         JBBJSE010000001-JBBJSE010000042
WGS_SCAFLD  NZ_JBBJSE010000001-NZ_JBBJSE010000042
//
LOCUS       NZ_MLMV01000000      1937058 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB392, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLMV00000000
VERSION     NZ_MLMV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297061
            Assembly: GCF_001867955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 1937058)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1937058)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLMV00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLMV00000000.  This version of the project
            (01) has the accession number NZ_MLMV01000000, and consists of
            sequences MLMV01000001-MLMV01000527.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 40.77x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001867955.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:00:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,206
            CDSs (total)                      :: 2,141
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 4, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 4, 9 (16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 210
            CDSs (without protein)            :: 210
            Pseudo Genes (ambiguous residues) :: 0 of 210
            Pseudo Genes (frameshifted)       :: 36 of 210
            Pseudo Genes (incomplete)         :: 165 of 210
            Pseudo Genes (internal stop)      :: 15 of 210
            Pseudo Genes (multiple problems)  :: 6 of 210
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1937058
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB392"
                     /isolation_source="Shiraz"
                     /db_xref="taxon:1247"
                     /geo_loc_name="Australia"
                     /collection_date="2001"
WGS         MLMV01000001-MLMV01000527
WGS_SCAFLD  NZ_MLMV01000001-NZ_MLMV01000527
//
LOCUS       NZ_JBBJSB010000000   4963385 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 20CO093, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBJSB000000000
VERSION     NZ_JBBJSB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623784
            Assembly: GCF_049789795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4963385)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4963385)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJSB000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJSB000000000.  This version of the project
            (01) has the accession number NZ_JBBJSB010000000, and consists of
            sequences JBBJSB010000001-JBBJSB010000039.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049789795.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:06:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,736
            CDSs (total)                      :: 4,664
            Genes (coding)                    :: 4,593
            CDSs (with protein)               :: 4,593
            Genes (RNA)                       :: 72
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 3 (5S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 23 of 71
            Pseudo Genes (incomplete)         :: 56 of 71
            Pseudo Genes (internal stop)      :: 23 of 71
            Pseudo Genes (multiple problems)  :: 23 of 71
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4963385
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="20CO093"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Colorado"
                     /collection_date="2020"
WGS         JBBJSB010000001-JBBJSB010000039
WGS_SCAFLD  NZ_JBBJSB010000001-NZ_JBBJSB010000039
//
LOCUS       NZ_MLNH01000000      1900323 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB438, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLNH00000000
VERSION     NZ_MLNH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297073
            Assembly: GCF_001868655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 1900323)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1900323)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLNH00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLNH00000000.  This version of the project
            (01) has the accession number NZ_MLNH01000000, and consists of
            sequences MLNH01000001-MLNH01000262.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 67.88x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001868655.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:04:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,125
            CDSs (total)                      :: 2,060
            Genes (coding)                    :: 1,862
            CDSs (with protein)               :: 1,862
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 3, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2, 6 (16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 1 of 198
            Pseudo Genes (frameshifted)       :: 63 of 198
            Pseudo Genes (incomplete)         :: 125 of 198
            Pseudo Genes (internal stop)      :: 19 of 198
            Pseudo Genes (multiple problems)  :: 10 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900323
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB438"
                     /isolation_source="Cabernet Sauvignon"
                     /db_xref="taxon:1247"
                     /collection_date="2001"
WGS         MLNH01000001-MLNH01000262
WGS_SCAFLD  NZ_MLNH01000001-NZ_MLNH01000262
//
LOCUS       NZ_MLMX01000000      1898938 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB398, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLMX00000000
VERSION     NZ_MLMX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297063
            Assembly: GCF_001868575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 1898938)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1898938)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLMX00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLMX00000000.  This version of the project
            (01) has the accession number NZ_MLMX01000000, and consists of
            sequences MLMX01000001-MLMX01000296.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 66.69x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001868575.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:03:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,130
            CDSs (total)                      :: 2,067
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 63
            rRNAs                             :: 4, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 2, 5 (16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 47 of 186
            Pseudo Genes (incomplete)         :: 122 of 186
            Pseudo Genes (internal stop)      :: 25 of 186
            Pseudo Genes (multiple problems)  :: 8 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1898938
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB398"
                     /isolation_source="Chardonnay"
                     /db_xref="taxon:1247"
                     /geo_loc_name="Australia"
                     /collection_date="2001"
WGS         MLMX01000001-MLMX01000296
WGS_SCAFLD  NZ_MLMX01000001-NZ_MLMX01000296
//
LOCUS       NZ_JAODTE010000000   4931141 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pectobacterium betavasculorum strain CFBP1520, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAODTE000000000
VERSION     NZ_JAODTE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN30917590
            Assembly: GCF_038442245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pectobacterium betavasculorum
  ORGANISM  Pectobacterium betavasculorum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (bases 1 to 4931141)
  AUTHORS   Borowska-Beszta,M., Smoktunowicz,M., Horoszkiewicz,D., Jonca,J.,
            Waleron,M.M., Gawor,J., Mika,A., Sledzinski,T., Waleron,K. and
            Waleron,M.
  TITLE     Comparative genomics, pangenomics, and phenomic studies of
            Pectobacterium betavasculorum strains isolated from sugar beet,
            potato, sunflower, and artichoke: insights into pathogenicity,
            virulence determinants, and adaptation to the host plant
  JOURNAL   Front Plant Sci 15, 1352318 (2024)
   PUBMED   38576793
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4931141)
  AUTHORS   Waleron,M., Waleron,K. and Waleron,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-SEP-2022) Laboratory of Plant Protection and
            Biotechnology, University of Gdansk, Abrahama 58, Gdansk, pomorskie
            80-307, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAODTE000000000.1.
            The Pectobacterium betavasculorum whole genome shotgun (WGS)
            project has the project accession NZ_JAODTE000000000.  This version
            of the project (01) has the accession number NZ_JAODTE010000000,
            and consists of sequences JAODTE010000001-JAODTE010000063.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from CIRM-CFBP French Collection
            for Plant Associated Bacteria.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 12-SEP-2022
            Assembly Method        :: MaSuRCA v. 4.0.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 56.0x
            Sequencing Technology  :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038442245.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:01:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,595
            CDSs (total)                      :: 4,462
            Genes (coding)                    :: 4,333
            CDSs (with protein)               :: 4,333
            Genes (RNA)                       :: 133
            rRNAs                             :: 8, 17, 23 (5S, 16S, 23S)
            complete rRNAs                    :: 8 (5S)
            partial rRNAs                     :: 17, 23 (16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 129
            CDSs (without protein)            :: 129
            Pseudo Genes (ambiguous residues) :: 0 of 129
            Pseudo Genes (frameshifted)       :: 58 of 129
            Pseudo Genes (incomplete)         :: 87 of 129
            Pseudo Genes (internal stop)      :: 23 of 129
            Pseudo Genes (multiple problems)  :: 35 of 129
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4931141
                     /organism="Pectobacterium betavasculorum"
                     /mol_type="genomic DNA"
                     /strain="CFBP1520"
                     /host="sunflower"
                     /db_xref="taxon:55207"
                     /geo_loc_name="Peru"
                     /collection_date="1974"
WGS         JAODTE010000001-JAODTE010000063
WGS_SCAFLD  NZ_JAODTE010000001-NZ_JAODTE010000063
//
LOCUS       NZ_JBBJSL010000000   4995396 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 09-63 1A, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJSL000000000
VERSION     NZ_JBBJSL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623774
            Assembly: GCF_049790195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4995396)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4995396)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJSL000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJSL000000000.  This version of the project
            (01) has the accession number NZ_JBBJSL010000000, and consists of
            sequences JBBJSL010000001-JBBJSL010000069.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049790195.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:02:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,724
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,544
            CDSs (with protein)               :: 4,544
            Genes (RNA)                       :: 113
            rRNAs                             :: 11, 10, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 6, 9, 5 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 20 of 67
            Pseudo Genes (incomplete)         :: 56 of 67
            Pseudo Genes (internal stop)      :: 16 of 67
            Pseudo Genes (multiple problems)  :: 18 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4995396
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="09-63 1A"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Pennsylvania"
                     /collection_date="2009"
WGS         JBBJSL010000001-JBBJSL010000069
WGS_SCAFLD  NZ_JBBJSL010000001-NZ_JBBJSL010000069
//
LOCUS       NZ_MLPL01000000      1971919 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB880, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLPL00000000
VERSION     NZ_MLPL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297130
            Assembly: GCF_001869285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 1971919)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1971919)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLPL00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLPL00000000.  This version of the project
            (01) has the accession number NZ_MLPL01000000, and consists of
            sequences MLPL01000001-MLPL01000298.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 52.24x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001869285.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:05:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,149
            CDSs (total)                      :: 2,086
            Genes (coding)                    :: 1,969
            CDSs (with protein)               :: 1,969
            Genes (RNA)                       :: 63
            rRNAs                             :: 3, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 18 of 117
            Pseudo Genes (incomplete)         :: 96 of 117
            Pseudo Genes (internal stop)      :: 6 of 117
            Pseudo Genes (multiple problems)  :: 3 of 117
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1971919
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB880"
                     /isolation_source="Wine"
                     /db_xref="taxon:1247"
                     /collection_date="1994"
WGS         MLPL01000001-MLPL01000298
WGS_SCAFLD  NZ_MLPL01000001-NZ_MLPL01000298
//
LOCUS       NZ_JBBJRO010000000   4981226 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 20OR0062, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJRO000000000
VERSION     NZ_JBBJRO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623797
            Assembly: GCF_049789355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4981226)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4981226)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJRO000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJRO000000000.  This version of the project
            (01) has the accession number NZ_JBBJRO010000000, and consists of
            sequences JBBJRO010000001-JBBJRO010000052.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049789355.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:09:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,714
            CDSs (total)                      :: 4,593
            Genes (coding)                    :: 4,519
            CDSs (with protein)               :: 4,519
            Genes (RNA)                       :: 121
            rRNAs                             :: 12, 7, 15 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 6, 7, 15 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 21 of 74
            Pseudo Genes (incomplete)         :: 61 of 74
            Pseudo Genes (internal stop)      :: 20 of 74
            Pseudo Genes (multiple problems)  :: 20 of 74
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4981226
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="20OR0062"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Oregon"
                     /collection_date="2020"
WGS         JBBJRO010000001-JBBJRO010000052
WGS_SCAFLD  NZ_JBBJRO010000001-NZ_JBBJRO010000052
//
LOCUS       NZ_JBBJRW010000000   4886511 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 20ID0049, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJRW000000000
VERSION     NZ_JBBJRW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623789
            Assembly: GCF_049789635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4886511)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4886511)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJRW000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJRW000000000.  This version of the project
            (01) has the accession number NZ_JBBJRW010000000, and consists of
            sequences JBBJRW010000001-JBBJRW010000050.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049789635.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:04:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,575
            CDSs (total)                      :: 4,493
            Genes (coding)                    :: 4,426
            CDSs (with protein)               :: 4,426
            Genes (RNA)                       :: 82
            rRNAs                             :: 3, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 24 of 67
            Pseudo Genes (incomplete)         :: 51 of 67
            Pseudo Genes (internal stop)      :: 23 of 67
            Pseudo Genes (multiple problems)  :: 23 of 67
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4886511
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="20ID0049"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Idaho"
                     /collection_date="2020"
WGS         JBBJRW010000001-JBBJRW010000050
WGS_SCAFLD  NZ_JBBJRW010000001-NZ_JBBJRW010000050
//
LOCUS       NZ_FMZM01000000      5292944 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Nocardioides lianchengensis strain CGMCC 4.6858, whole genome
            shotgun sequencing project.
ACCESSION   NZ_FMZM00000000
VERSION     NZ_FMZM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05421872
            Assembly: GCF_900101465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Nocardioides lianchengensis
  ORGANISM  Nocardioides lianchengensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FMZM00000000.1.
            The Nocardioides lianchengensis whole genome shotgun (WGS) project
            has the project accession NZ_FMZM00000000.  This version of the
            project (01) has the accession number NZ_FMZM01000000, and consists
            of sequences FMZM01000001-FMZM01000026.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900101465.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,121
            CDSs (total)                      :: 5,065
            Genes (coding)                    :: 5,044
            CDSs (with protein)               :: 5,044
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 2 of 21
            Pseudo Genes (incomplete)         :: 19 of 21
            Pseudo Genes (internal stop)      :: 0 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5292944
                     /organism="Nocardioides lianchengensis"
                     /mol_type="genomic DNA"
                     /strain="CGMCC 4.6858"
                     /type_material="type strain of Nocardioides
                     lianchengensis"
                     /db_xref="taxon:1045774"
WGS         FMZM01000001-FMZM01000026
WGS_SCAFLD  NZ_FMZM01000001-NZ_FMZM01000026
//
LOCUS       NZ_JBBJRK010000000   5046016 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 20PA0330, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJRK000000000
VERSION     NZ_JBBJRK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623801
            Assembly: GCF_049789235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 5046016)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5046016)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJRK000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJRK000000000.  This version of the project
            (01) has the accession number NZ_JBBJRK010000000, and consists of
            sequences JBBJRK010000001-JBBJRK010000037.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049789235.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:04:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,750
            CDSs (total)                      :: 4,677
            Genes (coding)                    :: 4,608
            CDSs (with protein)               :: 4,608
            Genes (RNA)                       :: 73
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 24 of 69
            Pseudo Genes (incomplete)         :: 49 of 69
            Pseudo Genes (internal stop)      :: 26 of 69
            Pseudo Genes (multiple problems)  :: 23 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5046016
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="20PA0330"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Pennsylvania"
                     /collection_date="2020"
WGS         JBBJRK010000001-JBBJRK010000037
WGS_SCAFLD  NZ_JBBJRK010000001-NZ_JBBJRK010000037
//
LOCUS       NZ_MLOS01000000      1877624 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB713, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLOS00000000
VERSION     NZ_MLOS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297110
            Assembly: GCF_001869645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 1877624)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1877624)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLOS00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLOS00000000.  This version of the project
            (01) has the accession number NZ_MLOS01000000, and consists of
            sequences MLOS01000001-MLOS01000341.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 35.30x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001869645.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:07:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,144
            CDSs (total)                      :: 2,078
            Genes (coding)                    :: 1,878
            CDSs (with protein)               :: 1,878
            Genes (RNA)                       :: 66
            rRNAs                             :: 3, 6, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 6, 7 (16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 200
            CDSs (without protein)            :: 200
            Pseudo Genes (ambiguous residues) :: 0 of 200
            Pseudo Genes (frameshifted)       :: 47 of 200
            Pseudo Genes (incomplete)         :: 138 of 200
            Pseudo Genes (internal stop)      :: 21 of 200
            Pseudo Genes (multiple problems)  :: 6 of 200
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1877624
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB713"
                     /isolation_source="Shiraz"
                     /db_xref="taxon:1247"
                     /collection_date="2009"
WGS         MLOS01000001-MLOS01000341
WGS_SCAFLD  NZ_MLOS01000001-NZ_MLOS01000341
//
LOCUS       NZ_JBBJRM010000000   4929357 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 20PA0047, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJRM000000000
VERSION     NZ_JBBJRM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623799
            Assembly: GCF_049789255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4929357)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4929357)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJRM000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJRM000000000.  This version of the project
            (01) has the accession number NZ_JBBJRM010000000, and consists of
            sequences JBBJRM010000001-JBBJRM010000037.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049789255.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:11:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,620
            CDSs (total)                      :: 4,544
            Genes (coding)                    :: 4,474
            CDSs (with protein)               :: 4,474
            Genes (RNA)                       :: 76
            rRNAs                             :: 2, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 20 of 70
            Pseudo Genes (incomplete)         :: 60 of 70
            Pseudo Genes (internal stop)      :: 18 of 70
            Pseudo Genes (multiple problems)  :: 20 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4929357
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="20PA0047"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Pennsylvania"
                     /collection_date="2020"
WGS         JBBJRM010000001-JBBJRM010000037
WGS_SCAFLD  NZ_JBBJRM010000001-NZ_JBBJRM010000037
//
LOCUS       NZ_MLPB01000000      1885226 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB847, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLPB00000000
VERSION     NZ_MLPB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297119
            Assembly: GCF_001869725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 1885226)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1885226)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLPB00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLPB00000000.  This version of the project
            (01) has the accession number NZ_MLPB01000000, and consists of
            sequences MLPB01000001-MLPB01000217.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 56.86x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001869725.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:11:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,107
            CDSs (total)                      :: 2,040
            Genes (coding)                    :: 1,866
            CDSs (with protein)               :: 1,866
            Genes (RNA)                       :: 67
            rRNAs                             :: 4, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 5, 6 (16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 174
            CDSs (without protein)            :: 174
            Pseudo Genes (ambiguous residues) :: 0 of 174
            Pseudo Genes (frameshifted)       :: 60 of 174
            Pseudo Genes (incomplete)         :: 104 of 174
            Pseudo Genes (internal stop)      :: 15 of 174
            Pseudo Genes (multiple problems)  :: 5 of 174
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1885226
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB847"
                     /isolation_source="Chardonnay"
                     /db_xref="taxon:1247"
                     /geo_loc_name="Australia"
                     /collection_date="2012"
WGS         MLPB01000001-MLPB01000217
WGS_SCAFLD  NZ_MLPB01000001-NZ_MLPB01000217
//
LOCUS       NZ_MLOK01000000      1959747 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB661, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLOK00000000
VERSION     NZ_MLOK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297102
            Assembly: GCF_001869575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 1959747)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1959747)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLOK00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLOK00000000.  This version of the project
            (01) has the accession number NZ_MLOK01000000, and consists of
            sequences MLOK01000001-MLOK01000221.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 36.61x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001869575.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:13:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,125
            CDSs (total)                      :: 2,063
            Genes (coding)                    :: 1,967
            CDSs (with protein)               :: 1,967
            Genes (RNA)                       :: 62
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 96
            CDSs (without protein)            :: 96
            Pseudo Genes (ambiguous residues) :: 0 of 96
            Pseudo Genes (frameshifted)       :: 10 of 96
            Pseudo Genes (incomplete)         :: 80 of 96
            Pseudo Genes (internal stop)      :: 7 of 96
            Pseudo Genes (multiple problems)  :: 1 of 96
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1959747
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB661"
                     /isolation_source="PinotGris"
                     /db_xref="taxon:1247"
                     /geo_loc_name="Australia"
                     /collection_date="2009"
WGS         MLOK01000001-MLOK01000221
WGS_SCAFLD  NZ_MLOK01000001-NZ_MLOK01000221
//
LOCUS       NZ_JBBJRU010000000   4883452 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 20ID0101, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJRU000000000
VERSION     NZ_JBBJRU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623791
            Assembly: GCF_049789535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4883452)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4883452)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJRU000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJRU000000000.  This version of the project
            (01) has the accession number NZ_JBBJRU010000000, and consists of
            sequences JBBJRU010000001-JBBJRU010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049789535.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:12:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,586
            CDSs (total)                      :: 4,490
            Genes (coding)                    :: 4,421
            CDSs (with protein)               :: 4,421
            Genes (RNA)                       :: 96
            rRNAs                             :: 8, 3, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2, 6 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 19 of 69
            Pseudo Genes (incomplete)         :: 54 of 69
            Pseudo Genes (internal stop)      :: 22 of 69
            Pseudo Genes (multiple problems)  :: 18 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4883452
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="20ID0101"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Idaho"
                     /collection_date="2020"
WGS         JBBJRU010000001-JBBJRU010000044
WGS_SCAFLD  NZ_JBBJRU010000001-NZ_JBBJRU010000044
//
LOCUS       NZ_JBBJRL010000000   4992660 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 20PA0287, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJRL000000000
VERSION     NZ_JBBJRL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623800
            Assembly: GCF_049789195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4992660)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4992660)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJRL000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJRL000000000.  This version of the project
            (01) has the accession number NZ_JBBJRL010000000, and consists of
            sequences JBBJRL010000001-JBBJRL010000042.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049789195.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:30:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,695
            CDSs (total)                      :: 4,620
            Genes (coding)                    :: 4,558
            CDSs (with protein)               :: 4,558
            Genes (RNA)                       :: 75
            rRNAs                             :: 2, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 19 of 62
            Pseudo Genes (incomplete)         :: 52 of 62
            Pseudo Genes (internal stop)      :: 12 of 62
            Pseudo Genes (multiple problems)  :: 18 of 62
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4992660
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="20PA0287"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Pennsylvania"
                     /collection_date="2020"
WGS         JBBJRL010000001-JBBJRL010000042
WGS_SCAFLD  NZ_JBBJRL010000001-NZ_JBBJRL010000042
//
LOCUS       NZ_LFVY01000000      5125653 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Nitratireductor soli strain ZZ-1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_LFVY00000000
VERSION     NZ_LFVY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03768409
            Assembly: GCF_001050155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Nitratireductor soli
  ORGANISM  Nitratireductor soli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Nitratireductor.
REFERENCE   1  (bases 1 to 5125653)
  AUTHORS   Chen,Q., Ni,H.Y., Zhuang,W., Sun,Z.G., Yang,Z.Z., Wang,H.M., He,Q.
            and He,J.
  TITLE     Nitratireductor soli sp. nov., isolated from phenol-contaminated
            soil
  JOURNAL   Antonie Van Leeuwenhoek 108 (5), 1139-1146 (2015)
   PUBMED   26346478
REFERENCE   2  (bases 1 to 5125653)
  AUTHORS   Chen,Q., Yao,L., Ni,H.-Y., Wang,H.-M. and He,J.
  TITLE     Nitratireductor sp.ZZ-1
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 5125653)
  AUTHORS   Chen,Q., Yao,L., Ni,H.-Y., Wang,H.-M. and He,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-JUN-2015) College of Life Sciences, Zaozhuang
            University, Beian Road, Zaozhuang, Shandong 277160, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LFVY00000000.1.
            The Nitratireductor soli whole genome shotgun (WGS) project has the
            project accession NZ_LFVY00000000.  This version of the project
            (01) has the accession number NZ_LFVY01000000, and consists of
            sequences LFVY01000001-LFVY01000060.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 2015
            Assembly Method       :: SOAPdenovo v. 2.04
            Genome Coverage       :: 691.25x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001050155.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:10:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,007
            CDSs (total)                      :: 4,955
            Genes (coding)                    :: 4,890
            CDSs (with protein)               :: 4,890
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 24 of 65
            Pseudo Genes (incomplete)         :: 48 of 65
            Pseudo Genes (internal stop)      :: 14 of 65
            Pseudo Genes (multiple problems)  :: 17 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5125653
                     /organism="Nitratireductor soli"
                     /mol_type="genomic DNA"
                     /strain="ZZ-1"
                     /type_material="type strain of Nitratireductor soli"
                     /db_xref="taxon:1670619"
                     /collection_date="2014-05-12"
WGS         LFVY01000001-LFVY01000060
WGS_SCAFLD  NZ_LFVY01000001-NZ_LFVY01000060
//
LOCUS       NZ_MLNW01000000      1875416 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB494, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLNW00000000
VERSION     NZ_MLNW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297088
            Assembly: GCF_001868905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 1875416)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1875416)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLNW00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLNW00000000.  This version of the project
            (01) has the accession number NZ_MLNW01000000, and consists of
            sequences MLNW01000001-MLNW01000254.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 53.64x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001868905.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:12:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,059
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,838
            CDSs (with protein)               :: 1,838
            Genes (RNA)                       :: 60
            rRNAs                             :: 3, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 161
            CDSs (without protein)            :: 161
            Pseudo Genes (ambiguous residues) :: 0 of 161
            Pseudo Genes (frameshifted)       :: 51 of 161
            Pseudo Genes (incomplete)         :: 95 of 161
            Pseudo Genes (internal stop)      :: 21 of 161
            Pseudo Genes (multiple problems)  :: 6 of 161
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1875416
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB494"
                     /isolation_source="Chardonnay"
                     /db_xref="taxon:1247"
                     /geo_loc_name="Australia"
                     /collection_date="2004"
WGS         MLNW01000001-MLNW01000254
WGS_SCAFLD  NZ_MLNW01000001-NZ_MLNW01000254
//
LOCUS       NZ_FNZV01000000      3869979 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pacificibacter marinus strain DSM 25228, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNZV00000000
VERSION     NZ_FNZV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04488032
            Assembly: GCF_900109555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pacificibacter marinus
  ORGANISM  Pacificibacter marinus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Pacificibacter.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNZV00000000.1.
            The Pacificibacter marinus whole genome shotgun (WGS) project has
            the project accession NZ_FNZV00000000.  This version of the project
            (01) has the accession number NZ_FNZV01000000, and consists of
            sequences FNZV01000001-FNZV01000043.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900109555.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:13:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,778
            CDSs (total)                      :: 3,728
            Genes (coding)                    :: 3,659
            CDSs (with protein)               :: 3,659
            Genes (RNA)                       :: 50
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 21 of 69
            Pseudo Genes (incomplete)         :: 60 of 69
            Pseudo Genes (internal stop)      :: 14 of 69
            Pseudo Genes (multiple problems)  :: 22 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3869979
                     /organism="Pacificibacter marinus"
                     /mol_type="genomic DNA"
                     /strain="DSM 25228"
                     /type_material="type strain of Roseovarius marinus"
                     /db_xref="taxon:658057"
WGS         FNZV01000001-FNZV01000043
WGS_SCAFLD  NZ_FNZV01000001-NZ_FNZV01000043
//
LOCUS       NZ_MLOR01000000      1867895 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB712, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLOR00000000
VERSION     NZ_MLOR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297109
            Assembly: GCF_001869615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 1867895)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1867895)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLOR00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLOR00000000.  This version of the project
            (01) has the accession number NZ_MLOR01000000, and consists of
            sequences MLOR01000001-MLOR01000339.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 23.84x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001869615.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:14:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,134
            CDSs (total)                      :: 2,075
            Genes (coding)                    :: 1,877
            CDSs (with protein)               :: 1,877
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 4, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 3, 6 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 42 of 198
            Pseudo Genes (incomplete)         :: 141 of 198
            Pseudo Genes (internal stop)      :: 20 of 198
            Pseudo Genes (multiple problems)  :: 5 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1867895
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB712"
                     /isolation_source="Cabernet Sauvignon"
                     /db_xref="taxon:1247"
                     /collection_date="2009"
WGS         MLOR01000001-MLOR01000339
WGS_SCAFLD  NZ_MLOR01000001-NZ_MLOR01000339
//
LOCUS       NZ_MLNF01000000      2029934 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB435, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLNF00000000
VERSION     NZ_MLNF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297071
            Assembly: GCF_001939495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 2029934)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029934)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLNF00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLNF00000000.  This version of the project
            (01) has the accession number NZ_MLNF01000000, and consists of
            sequences MLNF01000001-MLNF01000385.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 40.35x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001939495.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:23:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,261
            CDSs (total)                      :: 2,196
            Genes (coding)                    :: 2,065
            CDSs (with protein)               :: 2,065
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 3, 5 (16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 131
            CDSs (without protein)            :: 131
            Pseudo Genes (ambiguous residues) :: 0 of 131
            Pseudo Genes (frameshifted)       :: 15 of 131
            Pseudo Genes (incomplete)         :: 108 of 131
            Pseudo Genes (internal stop)      :: 10 of 131
            Pseudo Genes (multiple problems)  :: 2 of 131
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029934
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB435"
                     /isolation_source="Cabernet Sauvignon"
                     /db_xref="taxon:1247"
                     /geo_loc_name="Australia"
                     /collection_date="2002"
WGS         MLNF01000001-MLNF01000385
WGS_SCAFLD  NZ_MLNF01000001-NZ_MLNF01000385
//
LOCUS       NZ_FOHE01000000      3910061 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oceanobacillus limi strain IBRC-M 10780, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOHE00000000
VERSION     NZ_FOHE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05216389
            Assembly: GCF_900111445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oceanobacillus limi
  ORGANISM  Oceanobacillus limi
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Oceanobacillus.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOHE00000000.1.
            The Oceanobacillus limi whole genome shotgun (WGS) project has the
            project accession NZ_FOHE00000000.  This version of the project
            (01) has the accession number NZ_FOHE01000000, and consists of
            sequences FOHE01000001-FOHE01000051.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900111445.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:23:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,068
            CDSs (total)                      :: 3,977
            Genes (coding)                    :: 3,944
            CDSs (with protein)               :: 3,944
            Genes (RNA)                       :: 91
            rRNAs                             :: 5, 6, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 6, 2 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 9 of 33
            Pseudo Genes (incomplete)         :: 24 of 33
            Pseudo Genes (internal stop)      :: 6 of 33
            Pseudo Genes (multiple problems)  :: 4 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3910061
                     /organism="Oceanobacillus limi"
                     /mol_type="genomic DNA"
                     /strain="IBRC-M 10780"
                     /type_material="type strain of Oceanobacillus limi"
                     /db_xref="taxon:930131"
WGS         FOHE01000001-FOHE01000051
WGS_SCAFLD  NZ_FOHE01000001-NZ_FOHE01000051
//
LOCUS       NZ_FNGM01000000      7018251 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Paenibacillus jilunlii strain CGMCC 1.10239, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNGM00000000
VERSION     NZ_FNGM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05216191
            Assembly: GCF_900102965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paenibacillus jilunlii
  ORGANISM  Paenibacillus jilunlii
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNGM00000000.1.
            The Paenibacillus jilunlii whole genome shotgun (WGS) project has
            the project accession NZ_FNGM00000000.  This version of the project
            (01) has the accession number NZ_FNGM01000000, and consists of
            sequences FNGM01000001-FNGM01000039.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900102965.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:21:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,189
            CDSs (total)                      :: 6,087
            Genes (coding)                    :: 6,007
            CDSs (with protein)               :: 6,007
            Genes (RNA)                       :: 102
            rRNAs                             :: 7, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 8, 4 (16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 32 of 80
            Pseudo Genes (incomplete)         :: 62 of 80
            Pseudo Genes (internal stop)      :: 3 of 80
            Pseudo Genes (multiple problems)  :: 16 of 80
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7018251
                     /organism="Paenibacillus jilunlii"
                     /mol_type="genomic DNA"
                     /strain="CGMCC 1.10239"
                     /type_material="type strain of Paenibacillus jilunlii"
                     /db_xref="taxon:682956"
WGS         FNGM01000001-FNGM01000039
WGS_SCAFLD  NZ_FNGM01000001-NZ_FNGM01000039
//
LOCUS       NZ_MLOQ01000000      1838606 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Oenococcus oeni strain AWRIB710, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MLOQ00000000
VERSION     NZ_MLOQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04297108
            Assembly: GCF_001939355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (bases 1 to 1838606)
  AUTHORS   Sternes,P.R. and Borneman,A.R.
  TITLE     Consensus pan-genome assembly of the specialised wine bacterium
            Oenococcus oeni
  JOURNAL   BMC Genomics 17, 308 (2016)
   PUBMED   27118061
  REMARK    Erratum:[BMC Genomics. 2016 Oct 20;17(1):813. doi:
            10.1186/s12864-016-2811-2. PMID: 27765012]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1838606)
  AUTHORS   Borneman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2016) Research, The Australia Wine Research
            Institute, Corner of Hartley Grove and Paratoo Road, Adelaide, SA
            5064, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MLOQ00000000.1.
            The Oenococcus oeni whole genome shotgun (WGS) project has the
            project accession NZ_MLOQ00000000.  This version of the project
            (01) has the accession number NZ_MLOQ01000000, and consists of
            sequences MLOQ01000001-MLOQ01000150.
            Source DNA available from The Australian Wine Research Institute's
            culture collection.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: MIRA v. 4.0rc5
            Genome Coverage       :: 81.48x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001939355.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:26:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,005
            CDSs (total)                      :: 1,937
            Genes (coding)                    :: 1,789
            CDSs (with protein)               :: 1,789
            Genes (RNA)                       :: 68
            rRNAs                             :: 3, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 7, 7 (16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 148
            CDSs (without protein)            :: 148
            Pseudo Genes (ambiguous residues) :: 0 of 148
            Pseudo Genes (frameshifted)       :: 44 of 148
            Pseudo Genes (incomplete)         :: 88 of 148
            Pseudo Genes (internal stop)      :: 23 of 148
            Pseudo Genes (multiple problems)  :: 7 of 148
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1838606
                     /organism="Oenococcus oeni"
                     /mol_type="genomic DNA"
                     /strain="AWRIB710"
                     /isolation_source="Cabernet Sauvignon"
                     /db_xref="taxon:1247"
                     /geo_loc_name="Australia"
                     /collection_date="2009"
WGS         MLOQ01000001-MLOQ01000150
WGS_SCAFLD  NZ_MLOQ01000001-NZ_MLOQ01000150
//
LOCUS       NZ_FOXZ01000000      5005863 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Nitratireductor indicus strain CGMCC 1.10953, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FOXZ00000000
VERSION     NZ_FOXZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05216176
            Assembly: GCF_900115835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Nitratireductor indicus
  ORGANISM  Nitratireductor indicus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Nitratireductor.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FOXZ00000000.1.
            The Nitratireductor indicus whole genome shotgun (WGS) project has
            the project accession NZ_FOXZ00000000.  This version of the project
            (01) has the accession number NZ_FOXZ01000000, and consists of
            sequences FOXZ01000001-FOXZ01000036.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900115835.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:38:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,882
            CDSs (total)                      :: 4,820
            Genes (coding)                    :: 4,772
            CDSs (with protein)               :: 4,772
            Genes (RNA)                       :: 62
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 16 of 48
            Pseudo Genes (incomplete)         :: 38 of 48
            Pseudo Genes (internal stop)      :: 5 of 48
            Pseudo Genes (multiple problems)  :: 8 of 48
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5005863
                     /organism="Nitratireductor indicus"
                     /mol_type="genomic DNA"
                     /strain="CGMCC 1.10953"
                     /db_xref="taxon:721133"
WGS         FOXZ01000001-FOXZ01000036
WGS_SCAFLD  NZ_FOXZ01000001-NZ_FOXZ01000036
//
LOCUS       NZ_JNFP01000000      9337635 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Nocardia vulneris strain W9851 isolate Nocardia vulneri, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JNFP00000000
VERSION     NZ_JNFP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02799571
            Assembly: GCF_000811985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Nocardia vulneris
  ORGANISM  Nocardia vulneris
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (bases 1 to 9337635)
  AUTHORS   Lasker,B.A., Bell,M., Klenk,H.P., Sproer,C., Schumann,C.,
            Schumann,P. and Brown,J.M.
  TITLE     Nocardia vulneris sp. nov., isolated from wounds of human patients
            in North America
  JOURNAL   Antonie Van Leeuwenhoek 106 (3), 543-553 (2014)
   PUBMED   25015412
REFERENCE   2  (bases 1 to 9337635)
  AUTHORS   Hahnke,R.L. and Klenk,H.-P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAY-2014) Microorganisms, Leibniz Institute
            DSMZ-German Collection of Microorganisms and Cell Cultures,
            Inhoffenstrasse 7B, Braunschweig 38124, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JNFP00000000.1.
            The Nocardia vulneris whole genome shotgun (WGS) project has the
            project accession NZ_JNFP00000000.  This version of the project
            (01) has the accession number NZ_JNFP01000000, and consists of
            sequences JNFP01000001-JNFP01000137.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Newbler v. GS
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 363.4x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000811985.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:42:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,576
            CDSs (total)                      :: 8,513
            Genes (coding)                    :: 8,432
            CDSs (with protein)               :: 8,432
            Genes (RNA)                       :: 63
            rRNAs                             :: 1, 1 (5S, 16S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            tRNAs                             :: 58
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 12 of 81
            Pseudo Genes (incomplete)         :: 70 of 81
            Pseudo Genes (internal stop)      :: 2 of 81
            Pseudo Genes (multiple problems)  :: 3 of 81
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9337635
                     /organism="Nocardia vulneris"
                     /mol_type="genomic DNA"
                     /strain="W9851"
                     /isolate="Nocardia vulneri"
                     /isolation_source="leg wound"
                     /host="Homo sapiens"
                     /culture_collection="DSM:45737"
                     /type_material="type strain of Nocardia vulneris"
                     /db_xref="taxon:1141657"
WGS         JNFP01000001-JNFP01000137
WGS_SCAFLD  NZ_JNFP01000001-NZ_JNFP01000137
//
LOCUS       NZ_QQME01000000      2087885 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria meningitidis strain M22437, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QQME00000000
VERSION     NZ_QQME00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09704695
            Assembly: GCF_003492485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2087885)
  AUTHORS   Topaz,N., Boxrud,D., Retchless,A.C., Nichols,M., Chang,H.Y., Hu,F.
            and Wang,X.
  TITLE     BMScan: using whole genome similarity to rapidly and accurately
            identify bacterial meningitis causing species
  JOURNAL   BMC Infect Dis 18 (1), 405 (2018)
   PUBMED   30111301
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2087885)
  AUTHORS   Topaz,N., Retchless,A.C., Chang,H.-Y., Hu,F. and Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUL-2018) Bacterial Meningitis Lab, Centers for
            Disease Control and Prevention, 1600 Clifton Rd, Atlanta, GA 30333,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QQME00000000.1.
            The Neisseria meningitidis whole genome shotgun (WGS) project has
            the project accession NZ_QQME00000000.  This version of the project
            (01) has the accession number NZ_QQME01000000, and consists of
            sequences QQME01000001-QQME01000236.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 123.2292959492021x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003492485.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:50:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,183
            CDSs (total)                      :: 2,123
            Genes (coding)                    :: 1,956
            CDSs (with protein)               :: 1,956
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 167
            CDSs (without protein)            :: 167
            Pseudo Genes (ambiguous residues) :: 0 of 167
            Pseudo Genes (frameshifted)       :: 62 of 167
            Pseudo Genes (incomplete)         :: 116 of 167
            Pseudo Genes (internal stop)      :: 18 of 167
            Pseudo Genes (multiple problems)  :: 24 of 167
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087885
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /strain="M22437"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collected_by="Centers for Disease Control and Prevention"
WGS         QQME01000001-QQME01000236
WGS_SCAFLD  NZ_QQME01000001-NZ_QQME01000236
//
LOCUS       NZ_QQXH01000000      4875404 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain BD 1212, whole genome shotgun sequencing
            project.
ACCESSION   NZ_QQXH00000000
VERSION     NZ_QQXH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07807602
            Assembly: GCF_003369485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4875404)
  AUTHORS   Moloto,M.V., Goszczynska,T., Du Toit,L.J., Pierneef,R. and
            Coutinho,T.A.
  TITLE     Comparative genomics of pathogenic and non-pathogenic Pantoea
            agglomerans from onion seeds
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4875404)
  AUTHORS   Moloto,M.V., Goszczynska,T., Du Toit,L.J., Pierneef,R. and
            Coutinho,T.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-JUL-2018) Microbiology and Plant Pathology,
            Bacteriology, Agricultural Research Council, Plant Protection
            Research Institute, R573 KwaMhlanga/Moloto road, Roodeplaat East,
            Pretoria, Gauteng 0002, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QQXH00000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_QQXH00000000.  This version of the project
            (01) has the accession number NZ_QQXH01000000, and consists of
            sequences QQXH01000001-QQXH01000103.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 17-MAY-2016
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003369485.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:09:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,578
            CDSs (total)                      :: 4,524
            Genes (coding)                    :: 4,455
            CDSs (with protein)               :: 4,455
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1 (16S, 23S)
            complete rRNAs                    :: 3, 1 (16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 25 of 69
            Pseudo Genes (incomplete)         :: 51 of 69
            Pseudo Genes (internal stop)      :: 22 of 69
            Pseudo Genes (multiple problems)  :: 21 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4875404
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="BD 1212"
                     /isolation_source="seeds"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="South Africa"
                     /collection_date="2014-08-17"
                     /collected_by="ARC-Plant Protection Research,
                     Bacteriology"
                     /identified_by="V.M. Moloto"
WGS         QQXH01000001-QQXH01000103
WGS_SCAFLD  NZ_QQXH01000001-NZ_QQXH01000103
//
LOCUS       NZ_JACBLM010000000   2116916 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Neisseria meningitidis strain ind_7, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JACBLM000000000
VERSION     NZ_JACBLM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15425242
            Assembly: GCF_015707695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2116916)
  AUTHORS   Sukhum,K.V., Jean,S., Wallace,M., Anderson,N., Burnham,C.A. and
            Dantas,G.
  TITLE     Genomic Characterization of Emerging Bacterial Uropathogen
            Neisseria meningitidis, Which Was Misidentified as Neisseria
            gonorrhoeae by Nucleic Acid Amplification Testing
  JOURNAL   J Clin Microbiol 59 (2), e01699-20 (2021)
   PUBMED   33177123
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2116916)
  AUTHORS   Sukhum,K.V., Jean,S., Wallace,M., Anderson,N., Burnham,C.-A.D. and
            Dantas,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUL-2020) Pathology and Immunology, Washington
            University School of Medicine, 660 S Euclid Ave, St. Louis, MO
            63110, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JACBLM000000000.1.
            The Neisseria meningitidis whole genome shotgun (WGS) project has
            the project accession NZ_JACBLM000000000.  This version of the
            project (01) has the accession number NZ_JACBLM010000000, and
            consists of sequences JACBLM010000001-JACBLM010000237.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.11
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 109x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_015707695.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:53:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,210
            CDSs (total)                      :: 2,149
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 61
            rRNAs                             :: 1, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 3 (16S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 170
            CDSs (without protein)            :: 170
            Pseudo Genes (ambiguous residues) :: 0 of 170
            Pseudo Genes (frameshifted)       :: 47 of 170
            Pseudo Genes (incomplete)         :: 130 of 170
            Pseudo Genes (internal stop)      :: 13 of 170
            Pseudo Genes (multiple problems)  :: 19 of 170
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2116916
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /strain="ind_7"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="USA"
                     /collection_date="2018-03/2019-03"
WGS         JACBLM010000001-JACBLM010000237
WGS_SCAFLD  NZ_JACBLM010000001-NZ_JACBLM010000237
//
LOCUS       NZ_JBBJRJ010000000   4942842 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 20PA0499, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJRJ000000000
VERSION     NZ_JBBJRJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623802
            Assembly: GCF_049789135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4942842)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4942842)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJRJ000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJRJ000000000.  This version of the project
            (01) has the accession number NZ_JBBJRJ010000000, and consists of
            sequences JBBJRJ010000001-JBBJRJ010000048.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049789135.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:02:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,627
            CDSs (total)                      :: 4,547
            Genes (coding)                    :: 4,468
            CDSs (with protein)               :: 4,468
            Genes (RNA)                       :: 80
            rRNAs                             :: 2, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 21 of 79
            Pseudo Genes (incomplete)         :: 65 of 79
            Pseudo Genes (internal stop)      :: 18 of 79
            Pseudo Genes (multiple problems)  :: 18 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4942842
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="20PA0499"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Pennsylvania"
                     /collection_date="2020"
WGS         JBBJRJ010000001-JBBJRJ010000048
WGS_SCAFLD  NZ_JBBJRJ010000001-NZ_JBBJRJ010000048
//
LOCUS       NZ_JBBJPT010000000   4886008 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain Ptg009, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBJPT000000000
VERSION     NZ_JBBJPT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623844
            Assembly: GCF_049787395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4886008)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4886008)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJPT000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJPT000000000.  This version of the project
            (01) has the accession number NZ_JBBJPT010000000, and consists of
            sequences JBBJPT010000001-JBBJPT010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049787395.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:09:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,586
            CDSs (total)                      :: 4,521
            Genes (coding)                    :: 4,439
            CDSs (with protein)               :: 4,439
            Genes (RNA)                       :: 65
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 50
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 23 of 82
            Pseudo Genes (incomplete)         :: 67 of 82
            Pseudo Genes (internal stop)      :: 16 of 82
            Pseudo Genes (multiple problems)  :: 18 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4886008
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="Ptg009"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Washington"
                     /collection_date="2011"
WGS         JBBJPT010000001-JBBJPT010000044
WGS_SCAFLD  NZ_JBBJPT010000001-NZ_JBBJPT010000044
//
LOCUS       NZ_JBBJQH010000000   4967867 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 21UT177, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBJQH000000000
VERSION     NZ_JBBJQH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623830
            Assembly: GCF_049788015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4967867)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4967867)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJQH000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJQH000000000.  This version of the project
            (01) has the accession number NZ_JBBJQH010000000, and consists of
            sequences JBBJQH010000001-JBBJQH010000073.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049788015.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,712
            CDSs (total)                      :: 4,628
            Genes (coding)                    :: 4,551
            CDSs (with protein)               :: 4,551
            Genes (RNA)                       :: 84
            rRNAs                             :: 3, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 23 of 77
            Pseudo Genes (incomplete)         :: 63 of 77
            Pseudo Genes (internal stop)      :: 21 of 77
            Pseudo Genes (multiple problems)  :: 24 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4967867
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="21UT177"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Utah"
                     /collection_date="2021"
WGS         JBBJQH010000001-JBBJQH010000073
WGS_SCAFLD  NZ_JBBJQH010000001-NZ_JBBJQH010000073
//
LOCUS       NZ_JBBJQM010000000   5014436 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 21NY0253, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJQM000000000
VERSION     NZ_JBBJQM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623825
            Assembly: GCF_049788215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 5014436)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5014436)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJQM000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJQM000000000.  This version of the project
            (01) has the accession number NZ_JBBJQM010000000, and consists of
            sequences JBBJQM010000001-JBBJQM010000072.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049788215.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:10:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,700
            CDSs (total)                      :: 4,620
            Genes (coding)                    :: 4,547
            CDSs (with protein)               :: 4,547
            Genes (RNA)                       :: 80
            rRNAs                             :: 3, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 73
            CDSs (without protein)            :: 73
            Pseudo Genes (ambiguous residues) :: 0 of 73
            Pseudo Genes (frameshifted)       :: 18 of 73
            Pseudo Genes (incomplete)         :: 59 of 73
            Pseudo Genes (internal stop)      :: 14 of 73
            Pseudo Genes (multiple problems)  :: 15 of 73
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5014436
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="21NY0253"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: New York"
                     /collection_date="2021"
WGS         JBBJQM010000001-JBBJQM010000072
WGS_SCAFLD  NZ_JBBJQM010000001-NZ_JBBJQM010000072
//
LOCUS       NZ_JBBJQK010000000   5049230 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 21PA0045, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJQK000000000
VERSION     NZ_JBBJQK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623827
            Assembly: GCF_049788125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 5049230)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5049230)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJQK000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJQK000000000.  This version of the project
            (01) has the accession number NZ_JBBJQK010000000, and consists of
            sequences JBBJQK010000001-JBBJQK010000085.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049788125.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:05:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,775
            CDSs (total)                      :: 4,689
            Genes (coding)                    :: 4,625
            CDSs (with protein)               :: 4,625
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 20 of 64
            Pseudo Genes (incomplete)         :: 52 of 64
            Pseudo Genes (internal stop)      :: 18 of 64
            Pseudo Genes (multiple problems)  :: 19 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5049230
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="21PA0045"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Pennsylvania"
                     /collection_date="2021"
WGS         JBBJQK010000001-JBBJQK010000085
WGS_SCAFLD  NZ_JBBJQK010000001-NZ_JBBJQK010000085
//
LOCUS       NZ_JBBJQP010000000   4889383 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 21ID0148, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJQP000000000
VERSION     NZ_JBBJQP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623822
            Assembly: GCF_049788355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4889383)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4889383)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJQP000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJQP000000000.  This version of the project
            (01) has the accession number NZ_JBBJQP010000000, and consists of
            sequences JBBJQP010000001-JBBJQP010000074.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049788355.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:12:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,587
            CDSs (total)                      :: 4,502
            Genes (coding)                    :: 4,433
            CDSs (with protein)               :: 4,433
            Genes (RNA)                       :: 85
            rRNAs                             :: 3, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 23 of 69
            Pseudo Genes (incomplete)         :: 54 of 69
            Pseudo Genes (internal stop)      :: 24 of 69
            Pseudo Genes (multiple problems)  :: 24 of 69
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4889383
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="21ID0148"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Idaho"
                     /collection_date="2021"
WGS         JBBJQP010000001-JBBJQP010000074
WGS_SCAFLD  NZ_JBBJQP010000001-NZ_JBBJQP010000074
//
LOCUS       NZ_JBBJQG010000000   5044732 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 21UT179, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBJQG000000000
VERSION     NZ_JBBJQG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623831
            Assembly: GCF_049787955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 5044732)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5044732)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJQG000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJQG000000000.  This version of the project
            (01) has the accession number NZ_JBBJQG010000000, and consists of
            sequences JBBJQG010000001-JBBJQG010000075.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049787955.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:12:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,767
            CDSs (total)                      :: 4,688
            Genes (coding)                    :: 4,613
            CDSs (with protein)               :: 4,613
            Genes (RNA)                       :: 79
            rRNAs                             :: 2, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 21 of 75
            Pseudo Genes (incomplete)         :: 56 of 75
            Pseudo Genes (internal stop)      :: 19 of 75
            Pseudo Genes (multiple problems)  :: 14 of 75
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5044732
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="21UT179"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Utah"
                     /collection_date="2021"
WGS         JBBJQG010000001-JBBJQG010000075
WGS_SCAFLD  NZ_JBBJQG010000001-NZ_JBBJQG010000075
//
LOCUS       NZ_JBBJQN010000000   4899797 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 21NY0094, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJQN000000000
VERSION     NZ_JBBJQN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623824
            Assembly: GCF_049788235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4899797)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4899797)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJQN000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJQN000000000.  This version of the project
            (01) has the accession number NZ_JBBJQN010000000, and consists of
            sequences JBBJQN010000001-JBBJQN010000064.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049788235.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:17:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,579
            CDSs (total)                      :: 4,498
            Genes (coding)                    :: 4,432
            CDSs (with protein)               :: 4,432
            Genes (RNA)                       :: 81
            rRNAs                             :: 3, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 12 of 66
            Pseudo Genes (incomplete)         :: 55 of 66
            Pseudo Genes (internal stop)      :: 17 of 66
            Pseudo Genes (multiple problems)  :: 15 of 66
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4899797
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="21NY0094"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: New York"
                     /collection_date="2021"
WGS         JBBJQN010000001-JBBJQN010000064
WGS_SCAFLD  NZ_JBBJQN010000001-NZ_JBBJQN010000064
//
LOCUS       NZ_JBBJQO010000000   4889471 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 21ID0185, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJQO000000000
VERSION     NZ_JBBJQO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623823
            Assembly: GCF_049788245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4889471)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4889471)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJQO000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJQO000000000.  This version of the project
            (01) has the accession number NZ_JBBJQO010000000, and consists of
            sequences JBBJQO010000001-JBBJQO010000066.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049788245.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:19:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,661
            CDSs (total)                      :: 4,584
            Genes (coding)                    :: 4,508
            CDSs (with protein)               :: 4,508
            Genes (RNA)                       :: 77
            rRNAs                             :: 4, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 23 of 76
            Pseudo Genes (incomplete)         :: 61 of 76
            Pseudo Genes (internal stop)      :: 24 of 76
            Pseudo Genes (multiple problems)  :: 24 of 76
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4889471
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="21ID0185"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Idaho"
                     /collection_date="2021"
WGS         JBBJQO010000001-JBBJQO010000066
WGS_SCAFLD  NZ_JBBJQO010000001-NZ_JBBJQO010000066
//
LOCUS       NZ_JBBJQV010000000   4955626 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 20WA0256, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJQV000000000
VERSION     NZ_JBBJQV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623816
            Assembly: GCF_049788635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4955626)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4955626)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJQV000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJQV000000000.  This version of the project
            (01) has the accession number NZ_JBBJQV010000000, and consists of
            sequences JBBJQV010000001-JBBJQV010000040.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049788635.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:21:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,656
            CDSs (total)                      :: 4,581
            Genes (coding)                    :: 4,507
            CDSs (with protein)               :: 4,507
            Genes (RNA)                       :: 75
            rRNAs                             :: 2, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 27 of 74
            Pseudo Genes (incomplete)         :: 43 of 74
            Pseudo Genes (internal stop)      :: 25 of 74
            Pseudo Genes (multiple problems)  :: 16 of 74
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4955626
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="20WA0256"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Washington"
                     /collection_date="2020"
WGS         JBBJQV010000001-JBBJQV010000040
WGS_SCAFLD  NZ_JBBJQV010000001-NZ_JBBJQV010000040
//
LOCUS       NZ_JBBJRG010000000   4986363 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 20TX0124, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJRG000000000
VERSION     NZ_JBBJRG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623805
            Assembly: GCF_049789055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4986363)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4986363)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAR-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJRG000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJRG000000000.  This version of the project
            (01) has the accession number NZ_JBBJRG010000000, and consists of
            sequences JBBJRG010000001-JBBJRG010000097.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049789055.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:15:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,686
            CDSs (total)                      :: 4,613
            Genes (coding)                    :: 4,548
            CDSs (with protein)               :: 4,548
            Genes (RNA)                       :: 73
            rRNAs                             :: 2, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 20 of 65
            Pseudo Genes (incomplete)         :: 56 of 65
            Pseudo Genes (internal stop)      :: 14 of 65
            Pseudo Genes (multiple problems)  :: 18 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4986363
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="20TX0124"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Texas"
                     /collection_date="2020"
WGS         JBBJRG010000001-JBBJRG010000097
WGS_SCAFLD  NZ_JBBJRG010000001-NZ_JBBJRG010000097
//
LOCUS       NZ_JBBJRE010000000   4923867 bp    DNA     linear   BCT 24-APR-2026
DEFINITION  Pantoea agglomerans strain 20TX0132, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBJRE000000000
VERSION     NZ_JBBJRE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39623807
            Assembly: GCF_049788955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4923867)
  AUTHORS   Shin,G., Asselin,J., Smith,A., Aegerter,B., Coutinho,T.A., Zhao,M.,
            Dutta,B., Mazzone,J., Neupane,R., Gugino,B., Hoeptin,C., Khanal,M.,
            Malla,S., Nischwitz,C., Sidhu,J., Machado Burke,A., Davey,J.,
            Uchanski,M., Derie,M.L., Du Toit,L.J., Stresow,S., Bonasera,J.M.,
            Stodghill,P. and Kvitko,B.
  TITLE     Plasmids encode and can transmit Pantoea agglomerans onion
            pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4923867)
  AUTHORS   Shin,G.Y., Kvitko,B.H. and Smith,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2024) Plant Pathology, University of Georgia, 120
            Carlton Street, Miller Plant Sciences Building, Athens, GA 30602,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBJRE000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBBJRE000000000.  This version of the project
            (01) has the accession number NZ_JBBJRE010000000, and consists of
            sequences JBBJRE010000001-JBBJRE010000067.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049788955.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:22:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,608
            CDSs (total)                      :: 4,527
            Genes (coding)                    :: 4,462
            CDSs (with protein)               :: 4,462
            Genes (RNA)                       :: 81
            rRNAs                             :: 2, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 13 of 65
            Pseudo Genes (incomplete)         :: 57 of 65
            Pseudo Genes (internal stop)      :: 8 of 65
            Pseudo Genes (multiple problems)  :: 13 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4923867
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="20TX0132"
                     /host="Allium cepa"
                     /db_xref="taxon:549"
                     /geo_loc_name="USA: Texas"
                     /collection_date="2020"
WGS         JBBJRE010000001-JBBJRE010000067
WGS_SCAFLD  NZ_JBBJRE010000001-NZ_JBBJRE010000067
//
LOCUS       NZ_JAYKGW010000000   6507489 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Okeania sp. isolate 1238230, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAYKGW000000000
VERSION     NZ_JAYKGW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39195483
            Assembly: GCF_035285525.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Okeania sp. (lagoon metagenome)
  ORGANISM  Okeania sp.
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Oscillatoriophycideae; Oscillatoriales; Microcoleaceae; Okeania.
REFERENCE   1  (bases 1 to 6507489)
  AUTHORS   Ray,M., Manu,S., Rastogi,G. and Umapathy,G.
  TITLE     Cyanobacterial genomes from a brackish coastal lagoon reveal
            potential for novel biogeochemical functions and their evolution
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6507489)
  AUTHORS   Manu,S. and Umapathy,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JAN-2024) Laboratory for the Conservation of
            Endangered Species, CSIR-Centre for Cellular and Molecular Biology,
            Uppal Road, Hyderabad, Telangana 500007, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYKGW000000000.1.
            The Okeania sp. whole genome shotgun (WGS) project has the project
            accession NZ_JAYKGW000000000.  This version of the project (01) has
            the accession number NZ_JAYKGW010000000, and consists of sequences
            JAYKGW010000001-JAYKGW010000260.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_035285525.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 15:06:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,944
            CDSs (total)                      :: 4,903
            Genes (coding)                    :: 4,708
            CDSs (with protein)               :: 4,708
            Genes (RNA)                       :: 41
            rRNAs                             :: 4 (5S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 33
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 195
            CDSs (without protein)            :: 195
            Pseudo Genes (ambiguous residues) :: 0 of 195
            Pseudo Genes (frameshifted)       :: 36 of 195
            Pseudo Genes (incomplete)         :: 129 of 195
            Pseudo Genes (internal stop)      :: 64 of 195
            Pseudo Genes (multiple problems)  :: 31 of 195
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6507489
                     /organism="Okeania sp."
                     /mol_type="genomic DNA"
                     /isolate="1238230"
                     /isolation_source="surface water"
                     /db_xref="taxon:3100323"
                     /environmental_sample
                     /geo_loc_name="India: Chilika Lagoon, Odisha"
                     /lat_lon="19.70 N 85.25 E"
                     /collection_date="2019-12/2020-11"
                     /metagenome_source="lagoon metagenome"
                     /metagenomic
WGS         JAYKGW010000001-JAYKGW010000260
WGS_SCAFLD  NZ_JAYKGW010000001-NZ_JAYKGW010000260
//
LOCUS       NZ_JAAHHT010000000  10534024 bp    DNA     linear   ENV 24-APR-2026
DEFINITION  MAG: Okeania sp. SIO3I5, whole genome shotgun sequencing project.
ACCESSION   NZ_JAAHHT000000000
VERSION     NZ_JAAHHT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12797956
            Assembly: GCF_010672085.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Okeania sp. SIO3I5 (marine metagenome)
  ORGANISM  Okeania sp. SIO3I5
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Oscillatoriophycideae; Oscillatoriales; Microcoleaceae; Okeania.
REFERENCE   1  (bases 1 to 10534024)
  AUTHORS   Ferreira Leao,T., Wang,M., Moss,N., Da Silva,R., Sanders,J.,
            Nurk,S., Gurevich,A., Humphrey,G., Reher,R., Zhu,Q.,
            Belda-Ferre,P., Glukhov,E., Rex,R., Dorrestein,P.C., Knight,R.,
            Pevzner,P., Gerwick,W.H. and Gerwick,L.
  TITLE     Genomic insights into an expanded diversity of filamentous marine
            cyanobacteria reveals the extraordinary biosynthetic potential of
            Moorea and Okeania
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 10534024)
  AUTHORS   Ferreira Leao,T., Wang,M., Moss,N., Da Silva,R., Sanders,J.,
            Nurk,S., Gurevich,A., Humphrey,G., Reher,R., Zhu,Q.,
            Belda-Ferre,P., Glukhov,E., Rex,R., Dorrestein,P.C., Knight,R.,
            Pevzner,P., Gerwick,W.H. and Gerwick,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2019) Scripps Institution of Oceanography, UCSD,
            9500 Gilman Dr, La Jolla, CA 92093, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAHHT000000000.1.
            The Okeania sp. SIO3I5 whole genome shotgun (WGS) project has the
            project accession NZ_JAAHHT000000000.  This version of the project
            (01) has the accession number NZ_JAAHHT010000000, and consists of
            sequences JAAHHT010000001-JAAHHT010000562.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method           :: SPAdes v. 3.12.0
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: LGSU01000000
            Genome Coverage           :: 30x
            Sequencing Technology     :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_010672085.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 15:27:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,190
            CDSs (total)                      :: 8,145
            Genes (coding)                    :: 7,840
            CDSs (with protein)               :: 7,840
            Genes (RNA)                       :: 45
            rRNAs                             :: 2 (5S)
            complete rRNAs                    :: 2 (5S)
            tRNAs                             :: 39
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 305
            CDSs (without protein)            :: 305
            Pseudo Genes (ambiguous residues) :: 0 of 305
            Pseudo Genes (frameshifted)       :: 60 of 305
            Pseudo Genes (incomplete)         :: 240 of 305
            Pseudo Genes (internal stop)      :: 60 of 305
            Pseudo Genes (multiple problems)  :: 47 of 305
            CRISPR Arrays                     :: 14
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10534024
                     /organism="Okeania sp. SIO3I5"
                     /mol_type="genomic DNA"
                     /isolate="SIO3I5"
                     /isolation_source="marine benthic turfs"
                     /db_xref="taxon:2607805"
                     /environmental_sample
                     /geo_loc_name="Panama: Portobelo"
                     /lat_lon="8.769149 N 80.401158 W"
                     /collection_date="2012-03-23"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         JAAHHT010000001-JAAHHT010000562
WGS_SCAFLD  NZ_JAAHHT010000001-NZ_JAAHHT010000562
//
LOCUS       NZ_CDTHNH010000000   4107906 bp    DNA     linear   ENV 25-APR-2026
DEFINITION  MAG: Pseudoalteromonas atlantica isolate MarMAG_000566, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CDTHNH000000000
VERSION     NZ_CDTHNH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120696896
            Assembly: GCF_977332665.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Pseudoalteromonas atlantica (marine metagenome)
  ORGANISM  Pseudoalteromonas atlantica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (bases 1 to 4107906)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDTHNH000000000.1.
            The Pseudoalteromonas atlantica whole genome shotgun (WGS) project
            has the project accession NZ_CDTHNH000000000.  This version of the
            project (01) has the accession number NZ_CDTHNH010000000, and
            consists of sequences CDTHNH010000001-CDTHNH010000309.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977332665.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 01:28:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,860
            CDSs (total)                      :: 3,824
            Genes (coding)                    :: 3,694
            CDSs (with protein)               :: 3,694
            Genes (RNA)                       :: 36
            tRNAs                             :: 32
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 130
            CDSs (without protein)            :: 130
            Pseudo Genes (ambiguous residues) :: 0 of 130
            Pseudo Genes (frameshifted)       :: 9 of 130
            Pseudo Genes (incomplete)         :: 121 of 130
            Pseudo Genes (internal stop)      :: 2 of 130
            Pseudo Genes (multiple problems)  :: 2 of 130
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4107906
                     /organism="Pseudoalteromonas atlantica"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_000566"
                     /db_xref="taxon:288"
                     /environmental_sample
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDTHNH010000001-CDTHNH010000309
WGS_SCAFLD  NZ_CDTHNH010000001-NZ_CDTHNH010000309
//
LOCUS       NZ_JWBG01000000      3996920 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Proteus mirabilis strain 1150_PMIR, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JWBG00000000
VERSION     NZ_JWBG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03197106
            Assembly: GCF_001060355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Proteus mirabilis
  ORGANISM  Proteus mirabilis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Proteus.
REFERENCE   1  (bases 1 to 3996920)
  AUTHORS   Roach,D.J., Burton,J.N., Lee,C., Stackhouse,B., Butler-Wu,S.M.,
            Cookson,B.T., Shendure,J. and Salipante,S.J.
  TITLE     A Year of Infection in the Intensive Care Unit: Prospective Whole
            Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic
            Transmissions and Novel Microbiota
  JOURNAL   PLoS Genet 11 (7), e1005413 (2015)
   PUBMED   26230489
  REMARK    Erratum:[PLoS Genet. 2017 Apr 14;13(4):e1006724. doi:
            10.1371/journal.pgen.1006724. PMID: 28410416]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3996920)
  AUTHORS   Salipante,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratory Medicine, University of
            Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWBG00000000.1.
            The Proteus mirabilis whole genome shotgun (WGS) project has the
            project accession NZ_JWBG00000000.  This version of the project
            (01) has the accession number NZ_JWBG01000000, and consists of
            sequences JWBG01000001-JWBG01000201.
            Source DNA available from Steve Salipante, University of Washington
            Department of Laboratory Medicine, Box 357110, 1959 NE Pacific
            Street, NW120 Seattle, WA 98195-7110.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABYSS v. 1.3.5
            Genome Coverage       :: 21x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001060355.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 09:48:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,736
            CDSs (total)                      :: 3,701
            Genes (coding)                    :: 3,622
            CDSs (with protein)               :: 3,622
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 17 of 79
            Pseudo Genes (incomplete)         :: 59 of 79
            Pseudo Genes (internal stop)      :: 12 of 79
            Pseudo Genes (multiple problems)  :: 7 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3996920
                     /organism="Proteus mirabilis"
                     /mol_type="genomic DNA"
                     /strain="1150_PMIR"
                     /host="Homo sapiens"
                     /db_xref="taxon:584"
                     /geo_loc_name="USA: WA"
                     /collected_by="UW clinical laboratory"
WGS         JWBG01000001-JWBG01000201
WGS_SCAFLD  NZ_JWBG01000001-NZ_JWBG01000201
//
LOCUS       NZ_FNRH01000000      3940580 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Pelagibacterium halotolerans strain H642, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNRH00000000
VERSION     NZ_FNRH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05428936
            Assembly: GCF_900107865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pelagibacterium halotolerans
  ORGANISM  Pelagibacterium halotolerans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Devosiaceae; Pelagibacterium.
REFERENCE   1  (bases 1 to 3940580)
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNRH00000000.1.
            The Pelagibacterium halotolerans whole genome shotgun (WGS) project
            has the project accession NZ_FNRH00000000.  This version of the
            project (01) has the accession number NZ_FNRH01000000, and consists
            of sequences FNRH01000001-FNRH01000027.
            The organism was changed from 'Pelagibacterium sp. H642' to
            'Pelagibacterium halotolerans' in July  2020.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_900107865.1
            Current Name        :: Pelagibacterium halotolerans
            Previous Name       :: Pelagibacterium sp. H642
            Date Updated        :: 2020-07-30
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_000230555.1
            A1 Name             :: Pelagibacterium halotolerans
            A1 ANI              :: 99.98%
            A1 Query Coverage   :: 99.81%
            A1 Subject Coverage :: 99.6%
            Analysis 2 (A2)     :: Query vs. NO-TYPE genome for previous name
            A2 Genome (subject) :: no-type
            A2 Name             :: Pelagibacterium sp. H642
            A2 ANI              :: 0%
            A2 Query Coverage   :: 0%
            A2 Subject Coverage :: 0%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900107865.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:02:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,857
            CDSs (total)                      :: 3,800
            Genes (coding)                    :: 3,778
            CDSs (with protein)               :: 3,778
            Genes (RNA)                       :: 57
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 6 of 22
            Pseudo Genes (incomplete)         :: 18 of 22
            Pseudo Genes (internal stop)      :: 0 of 22
            Pseudo Genes (multiple problems)  :: 2 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3940580
                     /organism="Pelagibacterium halotolerans"
                     /mol_type="genomic DNA"
                     /strain="H642"
                     /db_xref="taxon:531813"
WGS         FNRH01000001-FNRH01000027
WGS_SCAFLD  NZ_FNRH01000001-NZ_FNRH01000027
//
LOCUS       NZ_FNQE01000000      3160879 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Proteiniborus ethanoligenes strain DSM 21650, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNQE00000000
VERSION     NZ_FNQE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05660462
            Assembly: GCF_900107485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Proteiniborus ethanoligenes
  ORGANISM  Proteiniborus ethanoligenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Proteiniborus.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNQE00000000.1.
            The Proteiniborus ethanoligenes whole genome shotgun (WGS) project
            has the project accession NZ_FNQE00000000.  This version of the
            project (01) has the accession number NZ_FNQE01000000, and consists
            of sequences FNQE01000001-FNQE01000069.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900107485.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:00:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,014
            CDSs (total)                      :: 2,980
            Genes (coding)                    :: 2,947
            CDSs (with protein)               :: 2,947
            Genes (RNA)                       :: 34
            rRNAs                             :: 2, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 3, 1 (16S, 23S)
            tRNAs                             :: 22
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 2 of 33
            Pseudo Genes (incomplete)         :: 27 of 33
            Pseudo Genes (internal stop)      :: 5 of 33
            Pseudo Genes (multiple problems)  :: 1 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3160879
                     /organism="Proteiniborus ethanoligenes"
                     /mol_type="genomic DNA"
                     /strain="DSM 21650"
                     /type_material="type strain of Proteiniborus
                     ethanoligenes"
                     /db_xref="taxon:415015"
WGS         FNQE01000001-FNQE01000069
WGS_SCAFLD  NZ_FNQE01000001-NZ_FNQE01000069
//
LOCUS       NZ_FNCS01000000      4296808 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Pelagibacterium luteolum strain CGMCC 1.10267, whole genome shotgun
            sequencing project.
ACCESSION   NZ_FNCS00000000
VERSION     NZ_FNCS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04487974
            Assembly: GCF_900100665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pelagibacterium luteolum
  ORGANISM  Pelagibacterium luteolum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Devosiaceae; Pelagibacterium.
REFERENCE   1
  AUTHORS   Varghese,N. and Submissions,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2016) DOE - JOINT GENOME INSTITUTE, LBNL, 2800
            Mitchell Drive, Walnut Creek, CA 94598, 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FNCS00000000.1.
            The Pelagibacterium luteolum whole genome shotgun (WGS) project has
            the project accession NZ_FNCS00000000.  This version of the project
            (01) has the accession number NZ_FNCS01000000, and consists of
            sequences FNCS01000001-FNCS01000050.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900100665.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:04:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,281
            CDSs (total)                      :: 4,227
            Genes (coding)                    :: 4,171
            CDSs (with protein)               :: 4,171
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 13 of 56
            Pseudo Genes (incomplete)         :: 46 of 56
            Pseudo Genes (internal stop)      :: 5 of 56
            Pseudo Genes (multiple problems)  :: 7 of 56
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4296808
                     /organism="Pelagibacterium luteolum"
                     /mol_type="genomic DNA"
                     /strain="CGMCC 1.10267"
                     /type_material="type strain of Pelagibacterium luteolum"
                     /db_xref="taxon:440168"
WGS         FNCS01000001-FNCS01000050
WGS_SCAFLD  NZ_FNCS01000001-NZ_FNCS01000050
//
LOCUS       NZ_QRYF01000000      5154196 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Phocaeicola vulgatus strain AF15-6A, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QRYF00000000
VERSION     NZ_QRYF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09734300
            Assembly: GCF_003464205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Phocaeicola vulgatus
  ORGANISM  Phocaeicola vulgatus
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Bacteroidaceae; Phocaeicola.
REFERENCE   1  (bases 1 to 5154196)
  AUTHORS   Zou,Y., Xue,W. and Luo,G.
  TITLE     A genome reference for cultivated species of the human gut
            microbiota
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5154196)
  AUTHORS   Zou,Y., Xue,W. and Luo,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-AUG-2018) BGI-CNGB, BGI, No. 11, Beishan IZ., Yantian
            Dist., Shenzhen, Guangdong 518083, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QRYF00000000.1.
            The Phocaeicola vulgatus whole genome shotgun (WGS) project has the
            project accession NZ_QRYF00000000.  This version of the project
            (01) has the accession number NZ_QRYF01000000, and consists of
            sequences QRYF01000001-QRYF01000144.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina Hiseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003464205.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:58:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,437
            CDSs (total)                      :: 4,358
            Genes (coding)                    :: 4,201
            CDSs (with protein)               :: 4,201
            Genes (RNA)                       :: 79
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 157
            CDSs (without protein)            :: 157
            Pseudo Genes (ambiguous residues) :: 0 of 157
            Pseudo Genes (frameshifted)       :: 49 of 157
            Pseudo Genes (incomplete)         :: 117 of 157
            Pseudo Genes (internal stop)      :: 14 of 157
            Pseudo Genes (multiple problems)  :: 21 of 157
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5154196
                     /organism="Phocaeicola vulgatus"
                     /mol_type="genomic DNA"
                     /strain="AF15-6A"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:821"
                     /geo_loc_name="China: Shenzhen"
                     /collection_date="2013-11-01"
WGS         QRYF01000001-QRYF01000144
WGS_SCAFLD  NZ_QRYF01000001-NZ_QRYF01000144
//
LOCUS       NZ_NTVG01000000      5897984 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Priestia megaterium strain AFS013729, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NTVG00000000
VERSION     NZ_NTVG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07597418
            Assembly: GCF_002557935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Priestia.
REFERENCE   1  (bases 1 to 5897984)
  AUTHORS   Bleich,R.M., Kirk,G.J., Santa Maria,K.C., Allen,S.E., Farag,S.,
            Shank,E.A. and Bowers,A.
  CONSRTM   Agbiome Team Llc
  TITLE     Large-scale bioinformatics analysis of Bacillus genomes uncovers
            conserved roles of natural products in bacterial physiology
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5897984)
  AUTHORS   Bleich,R.M., Kirk,G.J., Santa Maria,K.C., Allen,S.E., Farag,S.,
            Shank,E.A. and Bowers,A.
  CONSRTM   Agbiome Team Llc
  TITLE     Direct Submission
  JOURNAL   Submitted (01-SEP-2017) Chemical Biology and Medicinal Chemistry,
            UNC Chapel Hill, 125 Mason Farm Rd., Chapel Hill, NC 17599, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NTVG00000000.1.
            The Priestia megaterium whole genome shotgun (WGS) project has the
            project accession NZ_NTVG00000000.  This version of the project
            (01) has the accession number NZ_NTVG01000000, and consists of
            sequences NTVG01000001-NTVG01000121.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC Assembly Cell v. 4.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 43.13x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002557935.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 10:56:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,250
            CDSs (total)                      :: 6,166
            Genes (coding)                    :: 6,046
            CDSs (with protein)               :: 6,046
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 120
            Pseudo Genes (ambiguous residues) :: 0 of 121
            Pseudo Genes (frameshifted)       :: 27 of 121
            Pseudo Genes (incomplete)         :: 90 of 121
            Pseudo Genes (internal stop)      :: 16 of 121
            Pseudo Genes (multiple problems)  :: 12 of 121
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5897984
                     /organism="Priestia megaterium"
                     /mol_type="genomic DNA"
                     /strain="AFS013729"
                     /isolation_source="root"
                     /host="Corn"
                     /db_xref="taxon:1404"
                     /geo_loc_name="USA: IN"
                     /collection_date="2013-12-16"
                     /collected_by="AgBiome"
WGS         NTVG01000001-NTVG01000121
WGS_SCAFLD  NZ_NTVG01000001-NZ_NTVG01000121
//
LOCUS       NZ_SCHZ01000000      1948275 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Pediococcus acidilactici strain L2-A, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SCHZ00000000
VERSION     NZ_SCHZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10744156
            Assembly: GCF_004099815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pediococcus acidilactici
  ORGANISM  Pediococcus acidilactici
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Pediococcus; Pediococcus acidilactici group.
REFERENCE   1  (bases 1 to 1948275)
  AUTHORS   Ayala,D.I., Cook,P.W., Franco,J.G., Bugarel,M., Kottapalli,K.R.,
            Loneragan,G.H., Brashears,M. and Nightingale,K.
  TITLE     A systematic approach to identify and characterize the
            effectiveness and safety of novel probiotic strains to control
            foodborne pathogens along the food continuum through combined
            genotypic and phenotypic assays
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1948275)
  AUTHORS   Ayala,D.I., Cook,P.W., Franco,J.G., Bugarel,M., Kottapalli,K.R.,
            Loneragan,G.H., Brashears,M. and Nightingale,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JAN-2019) Animal and Food Sciences, Texas Tech
            University, 1008 Canton Ave, Lubbock, TX 79409, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SCHZ00000000.1.
            The Pediococcus acidilactici whole genome shotgun (WGS) project has
            the project accession NZ_SCHZ00000000.  This version of the project
            (01) has the accession number NZ_SCHZ01000000, and consists of
            sequences SCHZ01000001-SCHZ01000024.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 11
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 214x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004099815.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:08:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,935
            CDSs (total)                      :: 1,868
            Genes (coding)                    :: 1,800
            CDSs (with protein)               :: 1,800
            Genes (RNA)                       :: 67
            rRNAs                             :: 4, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 32 of 68
            Pseudo Genes (incomplete)         :: 15 of 68
            Pseudo Genes (internal stop)      :: 24 of 68
            Pseudo Genes (multiple problems)  :: 3 of 68
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1948275
                     /organism="Pediococcus acidilactici"
                     /mol_type="genomic DNA"
                     /strain="L2-A"
                     /host="bovine"
                     /db_xref="taxon:1254"
                     /geo_loc_name="USA"
                     /collection_date="2013"
WGS         SCHZ01000001-SCHZ01000024
WGS_SCAFLD  NZ_SCHZ01000001-NZ_SCHZ01000024
//
LOCUS       NZ_SCHS01000000      1946870 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Pediococcus acidilactici strain L8-A, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SCHS00000000
VERSION     NZ_SCHS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10744163
            Assembly: GCF_004099675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pediococcus acidilactici
  ORGANISM  Pediococcus acidilactici
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Pediococcus; Pediococcus acidilactici group.
REFERENCE   1  (bases 1 to 1946870)
  AUTHORS   Ayala,D.I., Cook,P.W., Franco,J.G., Bugarel,M., Kottapalli,K.R.,
            Loneragan,G.H., Brashears,M. and Nightingale,K.
  TITLE     A systematic approach to identify and characterize the
            effectiveness and safety of novel probiotic strains to control
            foodborne pathogens along the food continuum through combined
            genotypic and phenotypic assays
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1946870)
  AUTHORS   Ayala,D.I., Cook,P.W., Franco,J.G., Bugarel,M., Kottapalli,K.R.,
            Loneragan,G.H., Brashears,M. and Nightingale,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JAN-2019) Animal and Food Sciences, Texas Tech
            University, 1008 Canton Ave, Lubbock, TX 79409, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SCHS00000000.1.
            The Pediococcus acidilactici whole genome shotgun (WGS) project has
            the project accession NZ_SCHS00000000.  This version of the project
            (01) has the accession number NZ_SCHS01000000, and consists of
            sequences SCHS01000001-SCHS01000026.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 11
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 142x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004099675.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:08:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,935
            CDSs (total)                      :: 1,868
            Genes (coding)                    :: 1,797
            CDSs (with protein)               :: 1,797
            Genes (RNA)                       :: 67
            rRNAs                             :: 4, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 32 of 71
            Pseudo Genes (incomplete)         :: 17 of 71
            Pseudo Genes (internal stop)      :: 25 of 71
            Pseudo Genes (multiple problems)  :: 3 of 71
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1946870
                     /organism="Pediococcus acidilactici"
                     /mol_type="genomic DNA"
                     /strain="L8-A"
                     /host="bovine"
                     /db_xref="taxon:1254"
                     /geo_loc_name="USA"
                     /collection_date="2013"
WGS         SCHS01000001-SCHS01000026
WGS_SCAFLD  NZ_SCHS01000001-NZ_SCHS01000026
//
LOCUS       NZ_SCIH01000000      1936308 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Pediococcus acidilactici strain L14-B, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SCIH00000000
VERSION     NZ_SCIH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10744148
            Assembly: GCF_004100005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pediococcus acidilactici
  ORGANISM  Pediococcus acidilactici
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Pediococcus; Pediococcus acidilactici group.
REFERENCE   1  (bases 1 to 1936308)
  AUTHORS   Ayala,D.I., Cook,P.W., Franco,J.G., Bugarel,M., Kottapalli,K.R.,
            Loneragan,G.H., Brashears,M. and Nightingale,K.
  TITLE     A systematic approach to identify and characterize the
            effectiveness and safety of novel probiotic strains to control
            foodborne pathogens along the food continuum through combined
            genotypic and phenotypic assays
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1936308)
  AUTHORS   Ayala,D.I., Cook,P.W., Franco,J.G., Bugarel,M., Kottapalli,K.R.,
            Loneragan,G.H., Brashears,M. and Nightingale,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JAN-2019) Animal and Food Sciences, Texas Tech
            University, 1008 Canton Ave, Lubbock, TX 79409, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SCIH00000000.1.
            The Pediococcus acidilactici whole genome shotgun (WGS) project has
            the project accession NZ_SCIH00000000.  This version of the project
            (01) has the accession number NZ_SCIH01000000, and consists of
            sequences SCIH01000001-SCIH01000049.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 11
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 67x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004100005.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:16:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,938
            CDSs (total)                      :: 1,870
            Genes (coding)                    :: 1,797
            CDSs (with protein)               :: 1,797
            Genes (RNA)                       :: 68
            rRNAs                             :: 4, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 1 (16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 73
            CDSs (without protein)            :: 73
            Pseudo Genes (ambiguous residues) :: 0 of 73
            Pseudo Genes (frameshifted)       :: 32 of 73
            Pseudo Genes (incomplete)         :: 18 of 73
            Pseudo Genes (internal stop)      :: 26 of 73
            Pseudo Genes (multiple problems)  :: 3 of 73
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1936308
                     /organism="Pediococcus acidilactici"
                     /mol_type="genomic DNA"
                     /strain="L14-B"
                     /host="bovine"
                     /db_xref="taxon:1254"
                     /geo_loc_name="USA"
                     /collection_date="2013"
WGS         SCIH01000001-SCIH01000049
WGS_SCAFLD  NZ_SCIH01000001-NZ_SCIH01000049
//
LOCUS       NZ_QSBO01000000      5105201 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Phocaeicola vulgatus strain AF04-12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QSBO00000000
VERSION     NZ_QSBO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09734174
            Assembly: GCF_003465765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Phocaeicola vulgatus
  ORGANISM  Phocaeicola vulgatus
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Bacteroidaceae; Phocaeicola.
REFERENCE   1  (bases 1 to 5105201)
  AUTHORS   Zou,Y., Xue,W. and Luo,G.
  TITLE     A genome reference for cultivated species of the human gut
            microbiota
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5105201)
  AUTHORS   Zou,Y., Xue,W. and Luo,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-AUG-2018) BGI-CNGB, BGI, No. 11, Beishan IZ., Yantian
            Dist., Shenzhen, Guangdong 518083, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QSBO00000000.1.
            The Phocaeicola vulgatus whole genome shotgun (WGS) project has the
            project accession NZ_QSBO00000000.  This version of the project
            (01) has the accession number NZ_QSBO01000000, and consists of
            sequences QSBO01000001-QSBO01000136.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina Hiseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003465765.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,325
            CDSs (total)                      :: 4,244
            Genes (coding)                    :: 4,084
            CDSs (with protein)               :: 4,084
            Genes (RNA)                       :: 81
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 160
            CDSs (without protein)            :: 160
            Pseudo Genes (ambiguous residues) :: 0 of 160
            Pseudo Genes (frameshifted)       :: 45 of 160
            Pseudo Genes (incomplete)         :: 121 of 160
            Pseudo Genes (internal stop)      :: 19 of 160
            Pseudo Genes (multiple problems)  :: 20 of 160
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5105201
                     /organism="Phocaeicola vulgatus"
                     /mol_type="genomic DNA"
                     /strain="AF04-12"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:821"
                     /geo_loc_name="China: Shenzhen"
                     /collection_date="2012-11-01"
WGS         QSBO01000001-QSBO01000136
WGS_SCAFLD  NZ_QSBO01000001-NZ_QSBO01000136
//
LOCUS       NZ_SLTU01000000      6202868 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Phocaeicola dorei strain RJX1047, whole genome shotgun sequencing
            project.
ACCESSION   NZ_SLTU00000000
VERSION     NZ_SLTU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11080848
            Assembly: GCF_004347525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Phocaeicola dorei
  ORGANISM  Phocaeicola dorei
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Bacteroidaceae; Phocaeicola.
REFERENCE   1  (bases 1 to 6202868)
  AUTHORS   Vatanen,T., Plichta,D.R., Somani,J., Munch,P.C., Arthur,T.D.,
            Hall,A.B., Rudolf,S., Oakeley,E.J., Ke,X., Young,R.A., Haiser,H.J.,
            Kolde,R., Yassour,M., Luopajarvi,K., Siljander,H., Virtanen,S.M.,
            Ilonen,J., Uibo,R., Tillmann,V., Mokurov,S., Dorshakova,N.,
            Porter,J.A., McHardy,A.C., Lahdesmaki,H., Vlamakis,H.,
            Huttenhower,C., Knip,M. and Xavier,R.J.
  TITLE     Genomic variation and strain-specific functional adaptation in the
            human gut microbiome during early life
  JOURNAL   Nat Microbiol 4 (3), 470-479 (2019)
   PUBMED   30559407
  REMARK    Erratum:[Nat Microbiol. 2019 Mar;4(3):545. doi:
            10.1038/s41564-019-0393-x. PMID: 30723264]
REFERENCE   2  (bases 1 to 6202868)
  AUTHORS   Vatanen,T., Plichta,D.R., Somani,J., Munch,P.C., Arthur,T.D.,
            Hall,A.B., Rudolf,S., Oakeley,E.J., Ke,X., Young,R.A., Haiser,H.J.,
            Kolde,R., Yassour,M., Luopajarvi,K., Siljander,H., Virtanen,S.M.,
            Ilonen,J., Uibo,R., Tillmann,V., Mokurov,S., Dorshakova,N.,
            Porter,J.A., Mchardy,A.C., Lahdesmaki,H., Vlamakis,H.,
            Huttenhower,C., Knip,M. and Xavier,R.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAR-2019) Infectious Disease and Microbiome Program,
            Broad Institute of MIT and Harvard, 415 Main St., Cambridge, MA
            02142, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SLTU00000000.1.
            The Phocaeicola dorei whole genome shotgun (WGS) project has the
            project accession NZ_SLTU00000000.  This version of the project
            (01) has the accession number NZ_SLTU01000000, and consists of
            sequences SLTU01000001-SLTU01000016.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            This genome has a base modification file available.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP4 (PacBio) v. 1.87.139483
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 36x
            Sequencing Technology  :: PacBio RSII
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004347525.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:51:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,185
            CDSs (total)                      :: 5,075
            Genes (coding)                    :: 4,822
            CDSs (with protein)               :: 4,822
            Genes (RNA)                       :: 110
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 253
            CDSs (without protein)            :: 253
            Pseudo Genes (ambiguous residues) :: 0 of 253
            Pseudo Genes (frameshifted)       :: 139 of 253
            Pseudo Genes (incomplete)         :: 113 of 253
            Pseudo Genes (internal stop)      :: 46 of 253
            Pseudo Genes (multiple problems)  :: 40 of 253
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6202868
                     /organism="Phocaeicola dorei"
                     /mol_type="genomic DNA"
                     /strain="RJX1047"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:357276"
                     /geo_loc_name="USA: Boston"
                     /collection_date="2016"
WGS         SLTU01000001-SLTU01000016
WGS_SCAFLD  NZ_SLTU01000001-NZ_SLTU01000016
//
LOCUS       NZ_JAFEMK010000000   2008293 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Pediococcus acidilactici strain G11, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAFEMK000000000
VERSION     NZ_JAFEMK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17825114
            Assembly: GCF_016890165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pediococcus acidilactici
  ORGANISM  Pediococcus acidilactici
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Pediococcus; Pediococcus acidilactici group.
REFERENCE   1  (bases 1 to 2008293)
  AUTHORS   Jahid,I.K.
  TITLE     Molecular identification of Pediococcus sp. and its in-vivo
            potentials to treat hyperglycemia and hypercholesterolaemia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2008293)
  AUTHORS   Jahid,I.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-FEB-2021) Department of Microbiology, Jashore
            University of Science and Technology, 1 Churamonkathi - Chaugachha
            Road, Jashore 7408, Bangladesh
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAFEMK000000000.1.
            The Pediococcus acidilactici whole genome shotgun (WGS) project has
            the project accession NZ_JAFEMK000000000.  This version of the
            project (01) has the accession number NZ_JAFEMK010000000, and
            consists of sequences JAFEMK010000001-JAFEMK010000028.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 03-FEB-2021
            Assembly Method           :: SPAdes v. v3.13
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: GCF_010092385.1
            Genome Coverage           :: 429x
            Sequencing Technology     :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_016890165.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:00:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,977
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,857
            CDSs (with protein)               :: 1,857
            Genes (RNA)                       :: 67
            rRNAs                             :: 5, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 16 of 53
            Pseudo Genes (incomplete)         :: 24 of 53
            Pseudo Genes (internal stop)      :: 16 of 53
            Pseudo Genes (multiple problems)  :: 3 of 53
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2008293
                     /organism="Pediococcus acidilactici"
                     /mol_type="genomic DNA"
                     /strain="G11"
                     /isolation_source="soil"
                     /db_xref="taxon:1254"
                     /geo_loc_name="Bangladesh: Jashore"
                     /lat_lon="23.18 N 89.18 E"
                     /collection_date="2020-04-07"
WGS         JAFEMK010000001-JAFEMK010000028
WGS_SCAFLD  NZ_JAFEMK010000001-NZ_JAFEMK010000028
//
LOCUS       NZ_SLTZ01000000      5440404 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Phocaeicola dorei strain RJX1050, whole genome shotgun sequencing
            project.
ACCESSION   NZ_SLTZ00000000
VERSION     NZ_SLTZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11080843
            Assembly: GCF_004347485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Phocaeicola dorei
  ORGANISM  Phocaeicola dorei
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Bacteroidaceae; Phocaeicola.
REFERENCE   1  (bases 1 to 5440404)
  AUTHORS   Vatanen,T., Plichta,D.R., Somani,J., Munch,P.C., Arthur,T.D.,
            Hall,A.B., Rudolf,S., Oakeley,E.J., Ke,X., Young,R.A., Haiser,H.J.,
            Kolde,R., Yassour,M., Luopajarvi,K., Siljander,H., Virtanen,S.M.,
            Ilonen,J., Uibo,R., Tillmann,V., Mokurov,S., Dorshakova,N.,
            Porter,J.A., McHardy,A.C., Lahdesmaki,H., Vlamakis,H.,
            Huttenhower,C., Knip,M. and Xavier,R.J.
  TITLE     Genomic variation and strain-specific functional adaptation in the
            human gut microbiome during early life
  JOURNAL   Nat Microbiol 4 (3), 470-479 (2019)
   PUBMED   30559407
  REMARK    Erratum:[Nat Microbiol. 2019 Mar;4(3):545. doi:
            10.1038/s41564-019-0393-x. PMID: 30723264]
REFERENCE   2  (bases 1 to 5440404)
  AUTHORS   Vatanen,T., Plichta,D.R., Somani,J., Munch,P.C., Arthur,T.D.,
            Hall,A.B., Rudolf,S., Oakeley,E.J., Ke,X., Young,R.A., Haiser,H.J.,
            Kolde,R., Yassour,M., Luopajarvi,K., Siljander,H., Virtanen,S.M.,
            Ilonen,J., Uibo,R., Tillmann,V., Mokurov,S., Dorshakova,N.,
            Porter,J.A., Mchardy,A.C., Lahdesmaki,H., Vlamakis,H.,
            Huttenhower,C., Knip,M. and Xavier,R.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAR-2019) Infectious Disease and Microbiome Program,
            Broad Institute of MIT and Harvard, 415 Main St., Cambridge, MA
            02142, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SLTZ00000000.1.
            The Phocaeicola dorei whole genome shotgun (WGS) project has the
            project accession NZ_SLTZ00000000.  This version of the project
            (01) has the accession number NZ_SLTZ01000000, and consists of
            sequences SLTZ01000001-SLTZ01000010.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            This genome has a base modification file available.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP4 (PacBio) v. 1.87.139483
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 29x
            Sequencing Technology  :: PacBio RSII
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004347485.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 11:53:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,580
            CDSs (total)                      :: 4,477
            Genes (coding)                    :: 4,186
            CDSs (with protein)               :: 4,186
            Genes (RNA)                       :: 103
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 291
            CDSs (without protein)            :: 291
            Pseudo Genes (ambiguous residues) :: 0 of 291
            Pseudo Genes (frameshifted)       :: 210 of 291
            Pseudo Genes (incomplete)         :: 89 of 291
            Pseudo Genes (internal stop)      :: 21 of 291
            Pseudo Genes (multiple problems)  :: 25 of 291
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5440404
                     /organism="Phocaeicola dorei"
                     /mol_type="genomic DNA"
                     /strain="RJX1050"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:357276"
                     /geo_loc_name="Finland: Espoo"
                     /collection_date="2016"
WGS         SLTZ01000001-SLTZ01000010
WGS_SCAFLD  NZ_SLTZ01000001-NZ_SLTZ01000010
//
LOCUS       NZ_JAHDAT010000000   1957212 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Pediococcus acidilactici strain ST31BZ, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAHDAT000000000
VERSION     NZ_JAHDAT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN19274595
            Assembly: GCF_021378045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pediococcus acidilactici
  ORGANISM  Pediococcus acidilactici
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Pediococcus; Pediococcus acidilactici group.
REFERENCE   1  (bases 1 to 1957212)
  AUTHORS   Queiroz,L.L., Hoffmann,C., Lacorte,G.A., de Melo Franco,B.D.G. and
            Todorov,S.D.
  TITLE     Genomic and functional characterization of bacteriocinogenic lactic
            acid bacteria isolated from Boza, a traditional cereal-based
            beverage
  JOURNAL   Sci Rep 12 (1), 1460 (2022)
   PUBMED   35087086
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1957212)
  AUTHORS   Queiroz,L., Hoffmann,C., Lacorte,G.A., Melo Franco,B.D.G. and
            Todorov,S.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAY-2021) Microbiologia de Alimentos, Universidade de
            Sao Paulo, Av. Prof. Lineu Prestes, 580, Sao Paulo, SP 05508000,
            Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAHDAT000000000.1.
            The Pediococcus acidilactici whole genome shotgun (WGS) project has
            the project accession NZ_JAHDAT000000000.  This version of the
            project (01) has the accession number NZ_JAHDAT010000000, and
            consists of sequences JAHDAT010000001-JAHDAT010000021.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: FEB-2021
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 235x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021378045.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:08:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,943
            CDSs (total)                      :: 1,887
            Genes (coding)                    :: 1,809
            CDSs (with protein)               :: 1,809
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 33 of 78
            Pseudo Genes (incomplete)         :: 19 of 78
            Pseudo Genes (internal stop)      :: 31 of 78
            Pseudo Genes (multiple problems)  :: 5 of 78
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1957212
                     /organism="Pediococcus acidilactici"
                     /mol_type="genomic DNA"
                     /strain="ST31BZ"
                     /isolation_source="traditional fermented cereal"
                     /db_xref="taxon:1254"
                     /geo_loc_name="Bulgaria: Belogratchik"
                     /collection_date="2018-07"
WGS         JAHDAT010000001-JAHDAT010000021
WGS_SCAFLD  NZ_JAHDAT010000001-NZ_JAHDAT010000021
//
LOCUS       NZ_JAKZMQ010000000   1987188 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Pediococcus acidilactici strain PB3, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAKZMQ000000000
VERSION     NZ_JAKZMQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN26510316
            Assembly: GCF_022586895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pediococcus acidilactici
  ORGANISM  Pediococcus acidilactici
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Pediococcus; Pediococcus acidilactici group.
REFERENCE   1  (bases 1 to 1987188)
  AUTHORS   Shewfelt,G. and Wilcox,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-MAR-2022) Probiotic, ProBiota Inc, 14057 Ilderton Rd,
            Illderton, ON N0M2A0, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKZMQ000000000.1.
            The Pediococcus acidilactici whole genome shotgun (WGS) project has
            the project accession NZ_JAKZMQ000000000.  This version of the
            project (01) has the accession number NZ_JAKZMQ010000000, and
            consists of sequences JAKZMQ010000001-JAKZMQ010000034.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022586895.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:14:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,957
            CDSs (total)                      :: 1,898
            Genes (coding)                    :: 1,857
            CDSs (with protein)               :: 1,857
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 41
            CDSs (without protein)            :: 41
            Pseudo Genes (ambiguous residues) :: 0 of 41
            Pseudo Genes (frameshifted)       :: 23 of 41
            Pseudo Genes (incomplete)         :: 14 of 41
            Pseudo Genes (internal stop)      :: 11 of 41
            Pseudo Genes (multiple problems)  :: 7 of 41
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1987188
                     /organism="Pediococcus acidilactici"
                     /mol_type="genomic DNA"
                     /strain="PB3"
                     /isolation_source="yogurt"
                     /db_xref="taxon:1254"
                     /geo_loc_name="Canada: Ontario"
                     /collection_date="2021-10-08"
WGS         JAKZMQ010000001-JAKZMQ010000034
WGS_SCAFLD  NZ_JAKZMQ010000001-NZ_JAKZMQ010000034
//
LOCUS       NZ_JACBJP010000000   1969406 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Pediococcus acidilactici strain P1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JACBJP000000000
VERSION     NZ_JACBJP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15454223
            Assembly: GCF_022844645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pediococcus acidilactici
  ORGANISM  Pediococcus acidilactici
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Pediococcus; Pediococcus acidilactici group.
REFERENCE   1  (bases 1 to 1969406)
  AUTHORS   de Almeida,O.G.G., Vitulo,N., De Martinis,E.C.P. and Felis,G.E.
  TITLE     Pangenome analyses of LuxS-coding genes and enzymatic repertoires
            in cocoa-related lactic acid bacteria
  JOURNAL   Genomics 113 (4), 1659-1670 (2021)
   PUBMED   33839269
REFERENCE   2  (bases 1 to 1969406)
  AUTHORS   De Almeida,O.G.G., Vitulo,N., De Martinis,E.C.P. and Felis,G.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUL-2020) DACTB, FCFRP, Av do Cafe, s/n, Ribeirao
            Preto, SP 14040-903, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JACBJP000000000.1.
            The Pediococcus acidilactici whole genome shotgun (WGS) project has
            the project accession NZ_JACBJP000000000.  This version of the
            project (01) has the accession number NZ_JACBJP010000000, and
            consists of sequences JACBJP010000001-JACBJP010000043.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 42.45x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022844645.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:18:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,927
            CDSs (total)                      :: 1,879
            Genes (coding)                    :: 1,826
            CDSs (with protein)               :: 1,826
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 26 of 53
            Pseudo Genes (incomplete)         :: 19 of 53
            Pseudo Genes (internal stop)      :: 9 of 53
            Pseudo Genes (multiple problems)  :: 1 of 53
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1969406
                     /organism="Pediococcus acidilactici"
                     /mol_type="genomic DNA"
                     /strain="P1"
                     /isolation_source="cocoa fermentation"
                     /db_xref="taxon:1254"
                     /collection_date="2017-11-30"
WGS         JACBJP010000001-JACBJP010000043
WGS_SCAFLD  NZ_JACBJP010000001-NZ_JACBJP010000043
//
LOCUS       NZ_JAHONJ010000000   5239002 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Phocaeicola vulgatus strain DFI.4.2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAHONJ000000000
VERSION     NZ_JAHONJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN19731834
            Assembly: GCF_019132155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Phocaeicola vulgatus
  ORGANISM  Phocaeicola vulgatus
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Bacteroidaceae; Phocaeicola.
REFERENCE   1  (bases 1 to 5239002)
  AUTHORS   Lin,H., Littmann,E. and Pamer,E.G.
  TITLE     Collection of gut derived symbiotic bacterial strains cultured from
            healthy donors
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5239002)
  AUTHORS   Lin,H., Littmann,E. and Pamer,E.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUN-2021) Duchossois Family Institute, The University
            of Chicago, 900 E 57th St., Chicago, IL 60637, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAHONJ000000000.1.
            The Phocaeicola vulgatus whole genome shotgun (WGS) project has the
            project accession NZ_JAHONJ000000000.  This version of the project
            (01) has the accession number NZ_JAHONJ010000000, and consists of
            sequences JAHONJ010000001-JAHONJ010000188.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2021
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_019132155.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:32:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,533
            CDSs (total)                      :: 4,448
            Genes (coding)                    :: 4,292
            CDSs (with protein)               :: 4,292
            Genes (RNA)                       :: 85
            rRNAs                             :: 3, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 4 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 156
            CDSs (without protein)            :: 156
            Pseudo Genes (ambiguous residues) :: 0 of 156
            Pseudo Genes (frameshifted)       :: 49 of 156
            Pseudo Genes (incomplete)         :: 112 of 156
            Pseudo Genes (internal stop)      :: 17 of 156
            Pseudo Genes (multiple problems)  :: 17 of 156
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5239002
                     /organism="Phocaeicola vulgatus"
                     /mol_type="genomic DNA"
                     /strain="DFI.4.2"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:821"
                     /geo_loc_name="USA: Chicago"
WGS         JAHONJ010000001-JAHONJ010000188
WGS_SCAFLD  NZ_JAHONJ010000001-NZ_JAHONJ010000188
//
LOCUS       NZ_JAKGSL010000000   4086114 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Proteus mirabilis strain D35, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAKGSL000000000
VERSION     NZ_JAKGSL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN24114885
            Assembly: GCF_026229105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Proteus mirabilis
  ORGANISM  Proteus mirabilis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Proteus.
REFERENCE   1  (bases 1 to 4086114)
  AUTHORS   Hernandez-Garcia,M., Garcia-Castillo,M., Bou,G., Cercenado,E.,
            Delgado-Valverde,M., Oliver,A., Pitart,C., Rodriguez-Lozano,J.,
            Tormo,N., Melo-Cristino,J., Pinto,M.F., Goncalves,E., Alves,V.,
            Vieira,A.R., Ramalheira,E., Sancho,L., Diogo,J., Ferreira,R.,
            Cruz,H., Chaves,C., Duarte,J., Passaro,L., Diaz-Reganon,J. and
            Canton,R.
  TITLE     Imipenem-Relebactam Susceptibility in Enterobacterales Isolates
            Recovered from ICU Patients from Spain and Portugal (SUPERIOR and
            STEP Studies)
  JOURNAL   Microbiol Spectr 10 (5), e0292722 (2022)
   PUBMED   36043877
REFERENCE   2  (bases 1 to 4086114)
  AUTHORS   Hernandez-Garcia,M., Garcia-Castillo,M. and Canton,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2021) Microbiology, Hospital Universitario Ramon
            y Cajal (IRYCIS), Carretera de Colmenar Viejo Km 9.1, Madrid,
            Madrid 28034, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKGSL000000000.1.
            The Proteus mirabilis whole genome shotgun (WGS) project has the
            project accession NZ_JAKGSL000000000.  This version of the project
            (01) has the accession number NZ_JAKGSL010000000, and consists of
            sequences JAKGSL010000001-JAKGSL010000114.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. V3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 273x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_026229105.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 12:41:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,843
            CDSs (total)                      :: 3,755
            Genes (coding)                    :: 3,676
            CDSs (with protein)               :: 3,676
            Genes (RNA)                       :: 88
            rRNAs                             :: 5, 3, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 3, 6 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 20 of 79
            Pseudo Genes (incomplete)         :: 64 of 79
            Pseudo Genes (internal stop)      :: 21 of 79
            Pseudo Genes (multiple problems)  :: 21 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4086114
                     /organism="Proteus mirabilis"
                     /mol_type="genomic DNA"
                     /strain="D35"
                     /isolation_source="Intra-abdominal infection"
                     /host="Homo sapiens"
                     /db_xref="taxon:584"
                     /geo_loc_name="Spain:Madrid"
                     /collected_by="Hospital Universitario Ramon y Cajal"
WGS         JAKGSL010000001-JAKGSL010000114
WGS_SCAFLD  NZ_JAKGSL010000001-NZ_JAKGSL010000114
//
LOCUS       NZ_JAMSAR010000000   4020058 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Proteus mirabilis strain JZ44, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAMSAR000000000
VERSION     NZ_JAMSAR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN28928612
            Assembly: GCF_029435575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Proteus mirabilis
  ORGANISM  Proteus mirabilis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Proteus.
REFERENCE   1  (bases 1 to 4020058)
  AUTHORS   Ma,W.Q., Han,Y.Y., Zhou,L., Peng,W.Q., Mao,L.Y., Yang,X., Wang,Q.,
            Zhang,T.J., Wang,H.N. and Lei,C.W.
  TITLE     Contamination of Proteus mirabilis harbouring various clinically
            important antimicrobial resistance genes in retail meat and aquatic
            products from food markets in China
  JOURNAL   Front Microbiol 13, 1086800 (2022)
   PUBMED   36590410
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4020058)
  AUTHORS   Lei,C.-W.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUN-2022) College of Life Sciences, Sichuan
            University, No. 29 Wangjiang Road, Chengdu 610064, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAMSAR000000000.1.
            The Proteus mirabilis whole genome shotgun (WGS) project has the
            project accession NZ_JAMSAR000000000.  This version of the project
            (01) has the accession number NZ_JAMSAR010000000, and consists of
            sequences JAMSAR010000001-JAMSAR010000090.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-MAR-2022
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029435575.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:04:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,783
            CDSs (total)                      :: 3,696
            Genes (coding)                    :: 3,619
            CDSs (with protein)               :: 3,619
            Genes (RNA)                       :: 87
            rRNAs                             :: 6, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 5, 1, 5 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 20 of 77
            Pseudo Genes (incomplete)         :: 61 of 77
            Pseudo Genes (internal stop)      :: 13 of 77
            Pseudo Genes (multiple problems)  :: 14 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4020058
                     /organism="Proteus mirabilis"
                     /mol_type="genomic DNA"
                     /strain="JZ44"
                     /isolation_source="Pork meat"
                     /db_xref="taxon:584"
                     /geo_loc_name="China: Chengdu"
                     /lat_lon="30.64 N 104.09 E"
                     /collection_date="2022"
                     /collected_by="Chang-Wei Lei"
WGS         JAMSAR010000001-JAMSAR010000090
WGS_SCAFLD  NZ_JAMSAR010000001-NZ_JAMSAR010000090
//
LOCUS       NZ_JARMTF010000000   5521995 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Priestia megaterium strain NRS-1258, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JARMTF000000000
VERSION     NZ_JARMTF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN33769929
            Assembly: GCF_037907605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Priestia.
REFERENCE   1  (bases 1 to 5521995)
  AUTHORS   Dunlap,C.
  TITLE     Bacillus Genome Sequencing
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5521995)
  AUTHORS   Dunlap,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2023) CBP, USDA-ARS-NCAUR, 1815 N. University
            St., Peoria, IL 61604, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARMTF000000000.1.
            The Priestia megaterium whole genome shotgun (WGS) project has the
            project accession NZ_JARMTF000000000.  This version of the project
            (01) has the accession number NZ_JARMTF010000000, and consists of
            sequences JARMTF010000001-JARMTF010000191.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 21
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037907605.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 13:19:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,815
            CDSs (total)                      :: 5,721
            Genes (coding)                    :: 5,609
            CDSs (with protein)               :: 5,609
            Genes (RNA)                       :: 94
            rRNAs                             :: 3, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 23S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 29 of 112
            Pseudo Genes (incomplete)         :: 75 of 112
            Pseudo Genes (internal stop)      :: 26 of 112
            Pseudo Genes (multiple problems)  :: 16 of 112
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5521995
                     /organism="Priestia megaterium"
                     /mol_type="genomic DNA"
                     /strain="NRS-1258"
                     /isolation_source="potato interior"
                     /host="Solanum tuberosum"
                     /db_xref="taxon:1404"
                     /collection_date="1951-10-23"
WGS         JARMTF010000001-JARMTF010000191
WGS_SCAFLD  NZ_JARMTF010000001-NZ_JARMTF010000191
//
LOCUS       NZ_JBCDMT010000000   3146058 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Pseudoflavonifractor phocaeensis strain 1362, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBCDMT000000000
VERSION     NZ_JBCDMT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40948521
            Assembly: GCF_038439875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudoflavonifractor phocaeensis
  ORGANISM  Pseudoflavonifractor phocaeensis
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Pseudoflavonifractor.
REFERENCE   1  (bases 1 to 3146058)
  AUTHORS   Hu,J.
  TITLE     Genome of Pseudoflavonifractor phocaeensis 1362
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3146058)
  AUTHORS   Hu,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-APR-2024) Shenzhen Institute of Synthetic Biology,
            Shenzhen Institutes of Advanced Technology, Chinese Academy of
            Sciences, Xueyuan Street, Shenzhen 518055, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCDMT000000000.1.
            The Pseudoflavonifractor phocaeensis whole genome shotgun (WGS)
            project has the project accession NZ_JBCDMT000000000.  This version
            of the project (01) has the accession number NZ_JBCDMT010000000,
            and consists of sequences JBCDMT010000001-JBCDMT010000012.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: flye v. v2.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 400.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_038439875.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:04:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,915
            CDSs (total)                      :: 2,857
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3146058
                     /organism="Pseudoflavonifractor phocaeensis"
                     /mol_type="genomic DNA"
                     /strain="1362"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:1870988"
                     /geo_loc_name="China"
                     /collection_date="2020-08-08"
WGS         JBCDMT010000001-JBCDMT010000012
WGS_SCAFLD  NZ_JBCDMT010000001-NZ_JBCDMT010000012
//
LOCUS       NZ_JBMWAL010000000   5887665 bp    DNA     linear   BCT 25-APR-2026
DEFINITION  Priestia megaterium strain SSY-7-2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBMWAL000000000
VERSION     NZ_JBMWAL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47803851
            Assembly: GCF_049546875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales;
            Bacillaceae; Priestia.
REFERENCE   1  (bases 1 to 5887665)
  AUTHORS   Chen,H.
  TITLE     Wheat pastes-sourced Priestia megaterium SSY-7-2 with Uricase
            Activity: Screening, Mechanism, and Probiotic Safety Evaluation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5887665)
  AUTHORS   Chen,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-APR-2025) School of Food Science and Biological
            engineering, Zhejiang Gongshang University, Baiyang Street,
            Qiantang District, Hangzhou 310018, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBMWAL000000000.1.
            The Priestia megaterium whole genome shotgun (WGS) project has the
            project accession NZ_JBMWAL000000000.  This version of the project
            (01) has the accession number NZ_JBMWAL010000000, and consists of
            sequences JBMWAL010000001-JBMWAL010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: ABySS v. 2.2.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049546875.1-RS_2026_04_24
            Annotation Date                   :: 04/24/2026 14:21:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,146
            CDSs (total)                      :: 6,030
            Genes (coding)                    :: 5,906
            CDSs (with protein)               :: 5,906
            Genes (RNA)                       :: 116
            rRNAs                             :: 9, 13, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1 (5S, 16S)
            partial rRNAs                     :: 1, 12, 2 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 125
            CDSs (without protein)            :: 124
            Pseudo Genes (ambiguous residues) :: 0 of 125
            Pseudo Genes (frameshifted)       :: 39 of 125
            Pseudo Genes (incomplete)         :: 86 of 125
            Pseudo Genes (internal stop)      :: 18 of 125
            Pseudo Genes (multiple problems)  :: 18 of 125
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5887665
                     /organism="Priestia megaterium"
                     /mol_type="genomic DNA"
                     /strain="SSY-7-2"
                     /isolation_source="wheat pastes"
                     /db_xref="taxon:1404"
                     /collection_date="2022-12"
WGS         JBMWAL010000001-JBMWAL010000044
WGS_SCAFLD  NZ_JBMWAL010000001-NZ_JBMWAL010000044
//
