#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta -i HGDP/HGDP00039/HGDP00039.cram --algo MeanQualityByCycle HGDP/HGDP00039/QCmetrics/HGDP00039.MeanQualityByCycle.txt CYCLE MEAN_QUALITY 1 31.293646 2 31.589502 3 35.976195 4 36.356737 5 36.536721 6 40.932349 7 41.057237 8 41.121991 9 41.157688 10 41.175796 11 41.184460 12 41.185162 13 41.167231 14 41.167445 15 41.166429 16 41.164679 17 41.163007 18 41.137387 19 41.135113 20 41.125939 21 41.114782 22 41.100014 23 41.087500 24 41.067319 25 41.046663 26 40.935852 27 40.893890 28 40.877510 29 40.842441 30 40.806955 31 40.815177 32 40.800537 33 40.785343 34 40.783819 35 40.771687 36 40.751890 37 40.739320 38 40.720914 39 40.709002 40 40.681159 41 40.676254 42 40.668741 43 40.656687 44 40.638127 45 40.618294 46 40.596539 47 40.574990 48 40.548819 49 40.528536 50 40.506031 51 40.486933 52 40.487530 53 40.467308 54 40.459006 55 40.446688 56 40.432422 57 40.415266 58 40.382803 59 40.374112 60 40.356235 61 40.330776 62 40.309413 63 40.295675 64 40.264462 65 40.239801 66 40.215585 67 40.189043 68 40.149331 69 40.147049 70 40.088489 71 40.074397 72 40.059612 73 40.029529 74 40.007379 75 39.975110 76 39.235796 77 39.672691 78 39.878443 79 39.950098 80 39.974593 81 39.988300 82 39.961029 83 39.937627 84 39.914532 85 39.893774 86 39.867151 87 39.838903 88 39.815572 89 39.778125 90 39.752436 91 39.715775 92 39.681754 93 39.651323 94 39.586315 95 39.560566 96 39.536421 97 39.502712 98 39.456572 99 39.420322 100 39.359097 101 39.335797 102 39.287500 103 39.268941 104 39.218816 105 39.195646 106 39.150224 107 39.096986 108 38.932195 109 38.968156 110 38.916761 111 38.857833 112 38.800196 113 38.730790 114 38.675911 115 38.616142 116 38.548862 117 38.463792 118 38.353557 119 38.277030 120 38.213220 121 38.131027 122 38.016353 123 37.928698 124 37.843885 125 37.747383 126 37.658437 127 37.567325 128 37.453257 129 37.347397 130 37.230432 131 37.136677 132 37.021271 133 36.930535 134 36.811595 135 36.695471 136 36.559999 137 36.452722 138 36.328786 139 36.205813 140 36.056650 141 35.932344 142 35.803762 143 35.670851 144 35.540427 145 35.420119 146 35.261510 147 35.131861 148 34.996966 149 34.872016 150 34.713838 151 31.003203 152 30.595378 153 31.093941 154 35.198946 155 35.842041 156 36.080726 157 40.300378 158 40.340291 159 40.490857 160 40.540980 161 40.585085 162 40.574297 163 40.542425 164 40.530299 165 40.499537 166 40.451484 167 40.390444 168 40.372421 169 40.322299 170 40.324791 171 40.289163 172 40.239831 173 40.198455 174 40.164452 175 40.141728 176 40.107412 177 40.078897 178 40.087589 179 40.026713 180 40.035185 181 39.972142 182 39.946907 183 39.949731 184 39.908231 185 39.904870 186 39.869271 187 39.809509 188 39.771962 189 39.730849 190 39.747673 191 39.711841 192 39.635051 193 39.619621 194 39.539748 195 39.466902 196 39.429306 197 39.399956 198 39.360968 199 39.326813 200 39.258250 201 39.191953 202 39.130234 203 39.067135 204 39.033970 205 39.026601 206 38.993918 207 38.937963 208 38.872794 209 38.839803 210 38.827681 211 38.787862 212 38.756535 213 38.688692 214 38.690844 215 38.658519 216 38.641383 217 38.585819 218 38.516184 219 38.484344 220 38.466074 221 38.433928 222 38.401543 223 38.338014 224 38.299060 225 38.229467 226 38.127304 227 37.045924 228 37.720876 229 38.025127 230 38.159726 231 38.182767 232 38.182659 233 38.121171 234 38.090853 235 38.030663 236 38.009119 237 37.935443 238 37.860203 239 37.647591 240 37.723828 241 37.635581 242 37.533824 243 37.446451 244 37.394017 245 37.247343 246 37.172212 247 37.079136 248 36.993868 249 36.879281 250 36.788432 251 36.652383 252 36.517833 253 36.410840 254 36.292860 255 36.183774 256 36.082262 257 35.973589 258 35.837568 259 35.710853 260 35.583692 261 35.421036 262 35.282018 263 35.168225 264 34.988767 265 34.805810 266 34.648707 267 34.508599 268 34.336528 269 34.158872 270 34.007889 271 33.811201 272 33.676116 273 33.464809 274 33.260105 275 33.133692 276 32.951363 277 32.807001 278 32.633052 279 32.450531 280 32.250074 281 32.095763 282 31.928661 283 31.760760 284 31.579362 285 31.420990 286 31.248377 287 31.084580 288 30.902328 289 30.715777 290 30.557701 291 30.386714 292 30.202816 293 30.051163 294 29.867400 295 29.688941 296 29.529493 297 29.365581 298 29.218557 299 29.037593 300 28.835292 301 28.618431 302 24.473041