#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP00149/HGDP00149.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP00149/QCmetrics/HGDP00149.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 15.916 5.4134 16 3 0 0.13657 0.001808 0.044186 0.0032584 0.00013723 0.18596 0.99831 0.99246 0.93182 0.60416 0.19219 0.034556 0.0090919 0.0033645 0.0016349 0.00090557 0.00056743 0.00039018 0.00028794 0.00021872 0.99213 21 coverage high_quality_coverage_count 0 257398 1 187435 2 189218 3 217388 4 295602 5 472824 6 827913 7 1464099 8 2491003 9 3967763 10 5858706 11 8022713 12 10235144 13 12169888 14 13555376 15 14184222 16 14008276 17 13089067 18 11599384 19 9786398 20 7883643 21 6089958 22 4525939 23 3236344 24 2242225 25 1510146 26 995560 27 653744 28 427952 29 286012 30 197128 31 143029 32 108854 33 87286 34 74158 35 63971 36 57122 37 51302 38 46606 39 41749 40 38009 41 34540 42 31686 43 29339 44 26583 45 24214 46 22258 47 20619 48 18834 49 17026 50 15756 51 14492 52 13072 53 12278 54 11126 55 10137 56 9575 57 8780 58 8267 59 7455 60 7029 61 6565 62 5940 63 5664 64 5154 65 4831 66 4414 67 4192 68 3958 69 3689 70 3473 71 3138 72 3078 73 2855 74 2748 75 2601 76 2546 77 2317 78 2222 79 1984 80 1928 81 1806 82 1733 83 1662 84 1607 85 1567 86 1398 87 1326 88 1221 89 1304 90 1234 91 1223 92 1191 93 1118 94 1064 95 996 96 960 97 986 98 896 99 861 100 918 101 846 102 819 103 780 104 796 105 793 106 826 107 748 108 814 109 735 110 696 111 647 112 589 113 575 114 579 115 564 116 557 117 540 118 520 119 533 120 480 121 458 122 453 123 410 124 425 125 386 126 425 127 416 128 332 129 370 130 400 131 340 132 367 133 326 134 315 135 304 136 307 137 281 138 253 139 266 140 234 141 253 142 269 143 237 144 212 145 239 146 194 147 228 148 179 149 215 150 199 151 188 152 175 153 170 154 177 155 184 156 162 157 162 158 172 159 161 160 176 161 156 162 153 163 155 164 141 165 156 166 135 167 113 168 103 169 120 170 94 171 107 172 109 173 109 174 104 175 93 176 72 177 89 178 72 179 90 180 69 181 83 182 69 183 75 184 63 185 73 186 79 187 62 188 60 189 63 190 76 191 64 192 63 193 54 194 70 195 47 196 51 197 57 198 50 199 57 200 40 201 51 202 63 203 49 204 53 205 62 206 47 207 55 208 60 209 60 210 72 211 61 212 46 213 39 214 52 215 48 216 43 217 37 218 45 219 32 220 38 221 41 222 36 223 41 224 28 225 31 226 30 227 19 228 24 229 31 230 32 231 33 232 28 233 24 234 26 235 25 236 26 237 22 238 23 239 29 240 24 241 31 242 22 243 33 244 26 245 30 246 22 247 21 248 22 249 25 250 2582