#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP00512/HGDP00512.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP00512/QCmetrics/HGDP00512.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 14.811 5.0747 15 3 0 0.15961 0.0020347 0.042084 0.0040571 0.00013344 0.20792 0.99836 0.99092 0.89701 0.5063 0.13203 0.01992 0.0048428 0.0017094 0.00088159 0.00054982 0.00038569 0.00029417 0.00022938 0.00018287 0.98972 20 coverage high_quality_coverage_count 0 249150 1 189545 2 208909 3 284592 4 448802 5 773877 6 1385081 7 2403414 8 3886005 9 5836538 10 8113669 11 10435720 12 12469966 13 13892780 14 14520598 15 14290557 16 13292631 17 11710434 18 9803603 19 7834821 20 5988128 21 4403180 22 3115478 23 2131474 24 1415208 25 919883 26 589846 27 378546 28 243424 29 161816 30 110176 31 79978 32 60364 33 47987 34 40158 35 34602 36 30050 37 27165 38 24402 39 21760 40 19660 41 17451 42 15793 43 14209 44 12542 45 11254 46 10144 47 9217 48 8257 49 7394 50 6918 51 6353 52 5925 53 5473 54 5147 55 4660 56 4362 57 4104 58 3917 59 3608 60 3126 61 3065 62 2836 63 2641 64 2539 65 2377 66 2296 67 2090 68 2043 69 1954 70 1767 71 1718 72 1592 73 1488 74 1452 75 1333 76 1218 77 1243 78 1110 79 1001 80 1127 81 1063 82 1027 83 1052 84 994 85 996 86 917 87 952 88 901 89 826 90 856 91 808 92 741 93 698 94 687 95 669 96 660 97 704 98 638 99 614 100 587 101 541 102 551 103 553 104 466 105 467 106 463 107 464 108 481 109 428 110 418 111 456 112 419 113 385 114 374 115 390 116 424 117 390 118 380 119 365 120 364 121 354 122 331 123 321 124 288 125 287 126 270 127 283 128 239 129 276 130 270 131 256 132 230 133 238 134 283 135 217 136 252 137 222 138 234 139 201 140 216 141 210 142 204 143 195 144 182 145 199 146 213 147 186 148 206 149 228 150 215 151 234 152 216 153 242 154 224 155 202 156 197 157 189 158 173 159 181 160 166 161 161 162 154 163 148 164 155 165 165 166 138 167 133 168 121 169 122 170 110 171 136 172 122 173 105 174 115 175 110 176 90 177 100 178 112 179 97 180 99 181 97 182 96 183 76 184 78 185 91 186 103 187 83 188 80 189 90 190 107 191 87 192 85 193 100 194 75 195 92 196 68 197 56 198 70 199 55 200 60 201 42 202 33 203 52 204 60 205 54 206 54 207 42 208 59 209 57 210 60 211 51 212 57 213 48 214 57 215 58 216 73 217 63 218 48 219 45 220 43 221 48 222 51 223 54 224 50 225 47 226 42 227 51 228 40 229 35 230 44 231 40 232 34 233 43 234 29 235 45 236 43 237 45 238 43 239 36 240 28 241 32 242 33 243 30 244 44 245 28 246 28 247 36 248 40 249 37 250 2767