#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta -i HGDP/HGDP00515/HGDP00515.cram --algo MeanQualityByCycle HGDP/HGDP00515/QCmetrics/HGDP00515.MeanQualityByCycle.txt CYCLE MEAN_QUALITY 1 31.243623 2 31.605168 3 35.875901 4 36.365223 5 36.478127 6 40.932362 7 40.998246 8 41.051999 9 41.133331 10 41.173625 11 41.150983 12 41.178814 13 41.151677 14 41.165977 15 41.167108 16 41.162586 17 41.155538 18 41.135719 19 41.119352 20 41.081580 21 41.100624 22 41.099543 23 41.055590 24 41.060559 25 41.025561 26 40.919768 27 40.904942 28 40.848194 29 40.814767 30 40.798720 31 40.793220 32 40.735829 33 40.724865 34 40.708342 35 40.674450 36 40.651606 37 40.626590 38 40.611274 39 40.610486 40 40.613899 41 40.598622 42 40.577720 43 40.522831 44 40.527720 45 40.485841 46 40.503429 47 40.497176 48 40.471128 49 40.450203 50 40.411505 51 40.383589 52 40.392573 53 40.360781 54 40.331228 55 40.293306 56 40.288031 57 40.247288 58 40.232414 59 40.214124 60 40.185664 61 40.169406 62 40.156594 63 40.124347 64 40.078747 65 40.080287 66 40.062841 67 40.017706 68 39.989459 69 39.961303 70 39.945985 71 39.918205 72 39.832454 73 39.800989 74 39.772450 75 39.732023 76 38.886665 77 39.415273 78 39.649264 79 39.735393 80 39.747520 81 39.736340 82 39.722445 83 39.696655 84 39.679660 85 39.656481 86 39.617501 87 39.594180 88 39.562553 89 39.511049 90 39.496007 91 39.467329 92 39.411746 93 39.369933 94 39.334157 95 39.285560 96 39.264020 97 39.232754 98 39.195159 99 39.123518 100 39.094459 101 39.054902 102 39.014780 103 38.970940 104 38.924096 105 38.881212 106 38.854644 107 38.789407 108 38.732915 109 38.683742 110 38.605195 111 38.569738 112 38.499891 113 38.409915 114 38.357485 115 38.299440 116 38.239255 117 38.166528 118 38.088747 119 38.013913 120 37.886089 121 37.830622 122 37.756802 123 37.645983 124 37.555240 125 37.444764 126 37.381336 127 37.304630 128 37.202611 129 37.109598 130 36.999081 131 36.860112 132 36.777924 133 36.635042 134 36.562415 135 36.406084 136 36.314566 137 36.183780 138 36.100397 139 35.954257 140 35.816879 141 35.698465 142 35.556194 143 35.404589 144 35.288427 145 35.157667 146 34.999326 147 34.860808 148 34.730995 149 34.593790 150 34.476094 151 31.308800 152 29.511926 153 30.030898 154 34.750479 155 34.684500 156 35.545103 157 38.450455 158 39.452444 159 39.348965 160 39.540173 161 39.874522 162 39.784824 163 39.974685 164 39.933507 165 39.999725 166 39.896994 167 39.811765 168 39.831350 169 39.743036 170 39.807567 171 39.770853 172 39.695190 173 39.697657 174 39.618403 175 39.627049 176 39.512033 177 39.425162 178 39.553077 179 39.390393 180 39.513753 181 39.365237 182 39.303485 183 39.358198 184 39.195855 185 39.302432 186 39.247445 187 39.116773 188 39.065177 189 38.995217 190 39.114858 191 39.108652 192 38.958942 193 38.976866 194 38.744613 195 38.636561 196 38.518676 197 38.467161 198 38.394622 199 38.351221 200 38.324814 201 38.233019 202 38.150647 203 38.092104 204 38.020237 205 38.044388 206 37.952255 207 37.903631 208 37.845024 209 37.792411 210 37.740215 211 37.657518 212 37.660411 213 37.614027 214 37.546835 215 37.494620 216 37.414062 217 37.412240 218 37.333649 219 37.293901 220 37.259098 221 37.191269 222 37.141063 223 37.080539 224 37.010352 225 36.987133 226 36.878926 227 35.507248 228 36.389362 229 36.812463 230 37.007272 231 37.062119 232 37.067116 233 37.031016 234 36.935101 235 36.894205 236 36.830838 237 36.747986 238 36.651567 239 36.559506 240 36.482278 241 36.388185 242 36.285171 243 36.180836 244 36.049435 245 36.003233 246 35.886390 247 35.800538 248 35.663887 249 35.534376 250 35.412420 251 35.319413 252 35.195158 253 35.046405 254 34.941202 255 34.786439 256 34.653119 257 34.490483 258 34.364691 259 34.231909 260 34.071932 261 33.899500 262 33.744165 263 33.607001 264 33.417193 265 33.240660 266 33.076206 267 32.896966 268 32.664001 269 32.517765 270 32.340135 271 32.166041 272 32.013412 273 31.781607 274 31.605754 275 31.390798 276 31.213520 277 31.017384 278 30.861533 279 30.634863 280 30.444148 281 30.244972 282 30.086316 283 29.891535 284 29.718246 285 29.494028 286 29.341768 287 29.166057 288 29.006383 289 28.794582 290 28.606847 291 28.351895 292 28.191678 293 28.013617 294 27.846535 295 27.652171 296 27.525269 297 27.315008 298 27.124405 299 26.948891 300 26.767642 301 26.580512 302 23.104367