#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP00515/HGDP00515.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP00515/QCmetrics/HGDP00515.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 16.487 5.3915 16 3 0 0.13568 0.0020201 0.046251 0.0027726 7.3757e-05 0.18679 0.99816 0.99218 0.94101 0.65222 0.23844 0.0475 0.010215 0.0029783 0.0013275 0.00073409 0.00045188 0.00030265 0.0002081 0.00015008 0.99241 21 coverage high_quality_coverage_count 0 279681 1 196715 2 189536 3 225220 4 298161 5 446449 6 732603 7 1244534 8 2072388 9 3288607 10 4907353 11 6846657 12 8912387 13 10857333 14 12405269 15 13368159 16 13616155 17 13181910 18 12123889 19 10650641 20 8960684 21 7234881 22 5614317 23 4196646 24 3038684 25 2136277 26 1461505 27 985542 28 654217 29 434083 30 289259 31 199357 32 143437 33 108408 34 86417 35 71772 36 60414 37 52979 38 46620 39 42146 40 37729 41 34267 42 30986 43 28093 44 25509 45 22933 46 20830 47 18864 48 16930 49 14978 50 13387 51 11985 52 10910 53 9818 54 8843 55 8054 56 7505 57 7004 58 6628 59 6131 60 5741 61 5192 62 4998 63 4536 64 4344 65 4168 66 3802 67 3659 68 3336 69 3151 70 2983 71 2698 72 2532 73 2448 74 2238 75 2221 76 2041 77 1853 78 1907 79 1779 80 1717 81 1661 82 1619 83 1596 84 1427 85 1372 86 1329 87 1280 88 1216 89 1166 90 1067 91 1040 92 1041 93 888 94 909 95 878 96 854 97 782 98 692 99 674 100 697 101 593 102 580 103 528 104 543 105 552 106 531 107 474 108 469 109 458 110 468 111 424 112 395 113 361 114 369 115 345 116 343 117 352 118 335 119 338 120 327 121 300 122 285 123 251 124 245 125 273 126 266 127 259 128 237 129 230 130 225 131 232 132 252 133 234 134 250 135 234 136 212 137 189 138 176 139 186 140 166 141 186 142 187 143 155 144 147 145 140 146 126 147 114 148 138 149 108 150 150 151 99 152 93 153 89 154 90 155 77 156 110 157 106 158 94 159 86 160 111 161 97 162 81 163 77 164 89 165 82 166 68 167 90 168 73 169 84 170 63 171 84 172 85 173 59 174 66 175 55 176 63 177 72 178 58 179 52 180 69 181 68 182 86 183 59 184 77 185 60 186 59 187 76 188 67 189 82 190 74 191 84 192 88 193 91 194 77 195 78 196 71 197 64 198 51 199 60 200 43 201 50 202 66 203 74 204 52 205 50 206 49 207 49 208 47 209 44 210 52 211 43 212 46 213 40 214 36 215 37 216 39 217 31 218 45 219 33 220 45 221 42 222 43 223 42 224 50 225 46 226 56 227 38 228 33 229 45 230 30 231 30 232 43 233 29 234 30 235 30 236 31 237 21 238 21 239 25 240 26 241 6 242 16 243 21 244 17 245 23 246 15 247 21 248 11 249 12 250 1577