#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta -i HGDP/HGDP00601/HGDP00601.cram --algo MeanQualityByCycle HGDP/HGDP00601/QCmetrics/HGDP00601.MeanQualityByCycle.txt CYCLE MEAN_QUALITY 1 31.128281 2 31.496610 3 35.943482 4 36.360337 5 36.519223 6 40.946672 7 41.062787 8 41.118899 9 41.153627 10 41.165459 11 41.172934 12 41.171108 13 41.165724 14 41.163403 15 41.156984 16 41.148255 17 41.151125 18 41.136367 19 41.127620 20 41.113700 21 41.110454 22 41.086537 23 41.063081 24 41.038163 25 41.017296 26 40.931044 27 40.893674 28 40.871714 29 40.859195 30 40.829663 31 40.807654 32 40.804306 33 40.802059 34 40.793756 35 40.774536 36 40.756480 37 40.744695 38 40.716888 39 40.710337 40 40.699366 41 40.679718 42 40.672231 43 40.652266 44 40.633467 45 40.610067 46 40.602252 47 40.584299 48 40.566006 49 40.552279 50 40.532223 51 40.521285 52 40.509498 53 40.470653 54 40.461970 55 40.445228 56 40.421687 57 40.403625 58 40.378764 59 40.367276 60 40.346591 61 40.310157 62 40.288391 63 40.256701 64 40.222025 65 40.208062 66 40.194722 67 40.164367 68 40.150175 69 40.109341 70 40.108710 71 40.098809 72 40.052116 73 40.013467 74 39.995108 75 39.962093 76 39.205022 77 39.663329 78 39.867381 79 39.928588 80 39.957087 81 39.966723 82 39.958450 83 39.938240 84 39.919625 85 39.888011 86 39.862524 87 39.838412 88 39.803515 89 39.733297 90 39.715746 91 39.684640 92 39.659358 93 39.627867 94 39.605871 95 39.571017 96 39.523789 97 39.477526 98 39.425803 99 39.397111 100 39.363450 101 39.322088 102 39.281760 103 39.209906 104 39.151191 105 39.100310 106 39.021444 107 38.959405 108 38.877145 109 38.810734 110 38.758906 111 38.688825 112 38.610826 113 38.538564 114 38.465470 115 38.385509 116 38.305250 117 38.194590 118 38.132598 119 38.062791 120 37.963230 121 37.872204 122 37.791209 123 37.702562 124 37.595773 125 37.484308 126 37.342244 127 37.239152 128 37.124497 129 37.012879 130 36.889235 131 36.763234 132 36.644196 133 36.541595 134 36.422489 135 36.269012 136 36.157966 137 36.045047 138 35.931962 139 35.819429 140 35.664908 141 35.541286 142 35.393365 143 35.265306 144 35.139226 145 34.985468 146 34.823251 147 34.639472 148 34.503120 149 34.362557 150 34.220775 151 30.208439 152 30.297170 153 30.791742 154 34.996856 155 35.439983 156 35.646744 157 39.681723 158 40.029611 159 40.156134 160 40.237714 161 40.251847 162 40.235423 163 40.227096 164 40.153392 165 40.143650 166 40.089442 167 40.025306 168 39.990453 169 39.949078 170 39.957866 171 39.930982 172 39.857288 173 39.869969 174 39.822645 175 39.800428 176 39.742438 177 39.739511 178 39.772312 179 39.708167 180 39.727270 181 39.620971 182 39.584326 183 39.590510 184 39.531674 185 39.526856 186 39.498134 187 39.399103 188 39.366231 189 39.342766 190 39.388261 191 39.372093 192 39.254296 193 39.261710 194 39.161284 195 39.083314 196 39.032065 197 38.975778 198 38.936496 199 38.893587 200 38.848125 201 38.813045 202 38.740235 203 38.712655 204 38.679259 205 38.647140 206 38.606187 207 38.577366 208 38.513534 209 38.479111 210 38.426887 211 38.387168 212 38.365925 213 38.316336 214 38.290648 215 38.235721 216 38.195763 217 38.156693 218 38.111495 219 38.085986 220 38.040444 221 38.018567 222 37.957234 223 37.914062 224 37.871815 225 37.832169 226 37.733320 227 36.569903 228 37.263243 229 37.597677 230 37.749753 231 37.786776 232 37.770997 233 37.749085 234 37.697620 235 37.621413 236 37.575246 237 37.515544 238 37.422312 239 37.322324 240 37.245011 241 37.151034 242 37.038003 243 36.946161 244 36.862749 245 36.758653 246 36.640815 247 36.542718 248 36.412420 249 36.296275 250 36.199601 251 36.054606 252 35.942285 253 35.798733 254 35.672285 255 35.568435 256 35.429965 257 35.295716 258 35.118134 259 34.980838 260 34.849037 261 34.702931 262 34.549580 263 34.380104 264 34.216124 265 34.073354 266 33.919637 267 33.759744 268 33.601510 269 33.397382 270 33.243578 271 33.089451 272 32.925789 273 32.742338 274 32.593851 275 32.401445 276 32.231355 277 32.068397 278 31.916110 279 31.729018 280 31.558276 281 31.373607 282 31.212416 283 31.065743 284 30.879864 285 30.735605 286 30.546446 287 30.434713 288 30.284325 289 30.115757 290 29.957923 291 29.806588 292 29.624251 293 29.447833 294 29.267394 295 29.102218 296 28.952976 297 28.801926 298 28.661035 299 28.494656 300 28.360342 301 28.190870 302 24.010948