#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta -i HGDP/HGDP00632/HGDP00632.cram --algo MeanQualityByCycle HGDP/HGDP00632/QCmetrics/HGDP00632.MeanQualityByCycle.txt CYCLE MEAN_QUALITY 1 31.073921 2 31.668610 3 36.122073 4 36.460776 5 36.601777 6 41.098952 7 41.212123 8 41.266045 9 41.285412 10 41.310988 11 41.302138 12 41.311334 13 41.296763 14 41.300866 15 41.298455 16 41.288158 17 41.275824 18 41.272929 19 41.264953 20 41.255219 21 41.242488 22 41.230077 23 41.199951 24 41.187438 25 41.180045 26 41.109056 27 41.070965 28 41.048532 29 41.041035 30 41.013763 31 40.987696 32 40.986407 33 40.976220 34 40.970973 35 40.953885 36 40.949412 37 40.943370 38 40.912627 39 40.908541 40 40.903210 41 40.878488 42 40.858783 43 40.836359 44 40.832276 45 40.807735 46 40.799078 47 40.772494 48 40.766253 49 40.742146 50 40.727515 51 40.727302 52 40.718074 53 40.691861 54 40.680988 55 40.664656 56 40.639851 57 40.629641 58 40.622945 59 40.576917 60 40.569183 61 40.551825 62 40.523239 63 40.518526 64 40.502205 65 40.471737 66 40.454693 67 40.427593 68 40.415505 69 40.383807 70 40.355671 71 40.347559 72 40.336755 73 40.312271 74 40.280622 75 40.242048 76 39.536635 77 39.963333 78 40.173440 79 40.224758 80 40.259289 81 40.249072 82 40.247663 83 40.223326 84 40.214696 85 40.182655 86 40.143763 87 40.123663 88 40.115374 89 40.081710 90 40.054885 91 40.026361 92 40.019985 93 39.992014 94 39.932676 95 39.894613 96 39.867547 97 39.833948 98 39.797805 99 39.769109 100 39.735667 101 39.694281 102 39.660561 103 39.623368 104 39.554980 105 39.501600 106 39.436363 107 39.383035 108 39.311177 109 39.259521 110 39.195438 111 39.131627 112 39.073654 113 38.979888 114 38.928057 115 38.845299 116 38.763562 117 38.678973 118 38.609846 119 38.521988 120 38.455568 121 38.356900 122 38.285268 123 38.224444 124 38.123152 125 38.012750 126 37.897218 127 37.794743 128 37.672120 129 37.559129 130 37.461087 131 37.315009 132 37.216481 133 37.123802 134 36.976953 135 36.889808 136 36.763307 137 36.663658 138 36.528804 139 36.422364 140 36.271815 141 36.100870 142 35.941102 143 35.835944 144 35.740483 145 35.591697 146 35.435152 147 35.292418 148 35.142750 149 34.961517 150 34.871044 151 30.811892 152 30.097634 153 31.161885 154 35.313397 155 35.611361 156 35.976621 157 39.974105 158 39.992567 159 39.953633 160 40.138988 161 40.319670 162 40.253823 163 40.299417 164 40.191302 165 40.206731 166 40.158592 167 40.107715 168 40.123155 169 40.069734 170 40.141319 171 40.125820 172 40.037121 173 40.063938 174 39.985854 175 39.987457 176 39.942184 177 39.945193 178 39.961638 179 39.868195 180 39.927159 181 39.846457 182 39.791201 183 39.846108 184 39.743936 185 39.779007 186 39.749669 187 39.654175 188 39.584626 189 39.540245 190 39.585387 191 39.584367 192 39.497242 193 39.522791 194 39.419874 195 39.317135 196 39.308814 197 39.247109 198 39.204325 199 39.157733 200 39.128239 201 39.082561 202 39.034596 203 39.009618 204 38.990079 205 38.945985 206 38.902351 207 38.861325 208 38.805183 209 38.753122 210 38.716871 211 38.716275 212 38.693625 213 38.654767 214 38.614338 215 38.572364 216 38.554722 217 38.496714 218 38.449581 219 38.384700 220 38.379221 221 38.330458 222 38.303926 223 38.243716 224 38.142487 225 38.085947 226 38.023723 227 36.782515 228 37.536252 229 37.893294 230 38.075164 231 38.126971 232 38.088373 233 38.020768 234 38.026345 235 37.961918 236 37.870549 237 37.822405 238 37.747216 239 37.668187 240 37.554717 241 37.479006 242 37.392083 243 37.326106 244 37.215521 245 37.122268 246 37.023030 247 36.902979 248 36.833263 249 36.712789 250 36.569036 251 36.508245 252 36.370862 253 36.254476 254 36.110280 255 35.964178 256 35.800525 257 35.680945 258 35.494293 259 35.397709 260 35.294622 261 35.126559 262 34.995183 263 34.823936 264 34.636866 265 34.482858 266 34.334425 267 34.153999 268 34.018197 269 33.892758 270 33.700944 271 33.504799 272 33.378691 273 33.211450 274 33.059585 275 32.878663 276 32.708299 277 32.528718 278 32.290650 279 32.126684 280 31.993286 281 31.810603 282 31.637187 283 31.501003 284 31.357482 285 31.180689 286 31.011307 287 30.823459 288 30.653750 289 30.506137 290 30.368576 291 30.234794 292 30.077567 293 29.925325 294 29.721244 295 29.544796 296 29.390363 297 29.247260 298 29.078115 299 28.931903 300 28.750468 301 28.541899 302 24.322981