#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP00645/HGDP00645.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP00645/QCmetrics/HGDP00645.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 14.973 4.9466 15 3 0 0.18352 0.0017845 0.033592 0.0028656 0.00013277 0.2219 0.99751 0.98905 0.90507 0.52447 0.14007 0.021513 0.005363 0.0017537 0.0008043 0.00044307 0.0002817 0.00019821 0.00014773 0.00011055 0.98911 20 coverage high_quality_coverage_count 0 378948 1 288781 2 273661 3 305342 4 419489 5 680492 6 1192043 7 2088416 8 3468171 9 5345289 10 7592625 11 9973162 12 12112776 13 13699648 14 14515410 15 14466241 16 13572935 17 12066325 18 10179910 19 8188356 20 6295974 21 4650422 22 3308636 23 2268245 24 1510655 25 983871 26 633151 27 404070 28 261685 29 173818 30 121285 31 89585 32 70183 33 56510 34 47499 35 40795 36 36097 37 32122 38 29118 39 25836 40 22705 41 19926 42 17930 43 15846 44 14353 45 12725 46 11613 47 10630 48 9723 49 8967 50 8060 51 7219 52 6449 53 5953 54 5493 55 5076 56 4620 57 4388 58 4083 59 3607 60 3222 61 2992 62 2976 63 2666 64 2534 65 2324 66 2150 67 2004 68 1853 69 1826 70 1723 71 1596 72 1479 73 1400 74 1248 75 1184 76 1130 77 1004 78 998 79 938 80 943 81 916 82 853 83 800 84 762 85 730 86 736 87 689 88 671 89 579 90 623 91 706 92 629 93 599 94 560 95 538 96 537 97 511 98 476 99 477 100 444 101 469 102 467 103 462 104 421 105 383 106 401 107 421 108 399 109 353 110 356 111 346 112 314 113 289 114 251 115 273 116 233 117 253 118 246 119 275 120 249 121 228 122 242 123 195 124 200 125 197 126 185 127 177 128 155 129 160 130 164 131 163 132 169 133 167 134 155 135 159 136 128 137 121 138 111 139 118 140 96 141 109 142 120 143 107 144 96 145 108 146 98 147 88 148 82 149 100 150 85 151 67 152 80 153 64 154 63 155 68 156 67 157 49 158 49 159 54 160 50 161 51 162 39 163 56 164 40 165 48 166 39 167 44 168 37 169 44 170 41 171 47 172 30 173 39 174 33 175 48 176 47 177 41 178 37 179 45 180 42 181 30 182 38 183 31 184 36 185 39 186 35 187 30 188 29 189 34 190 34 191 46 192 26 193 28 194 24 195 36 196 31 197 28 198 21 199 16 200 26 201 28 202 25 203 15 204 22 205 11 206 13 207 20 208 24 209 19 210 14 211 33 212 18 213 20 214 15 215 23 216 16 217 24 218 24 219 24 220 25 221 21 222 39 223 26 224 23 225 29 226 25 227 18 228 28 229 20 230 28 231 22 232 24 233 23 234 18 235 23 236 15 237 20 238 13 239 19 240 16 241 17 242 17 243 28 244 16 245 10 246 21 247 14 248 10 249 10 250 2145