#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP00663/HGDP00663.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP00663/QCmetrics/HGDP00663.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	33.345	8.8081	33	4	0	0.1354	0.0026415	0.035883	0.0031598	0.0010143	0.1781	0.99899	0.99699	0.99392	0.98879	0.9745	0.91045	0.71657	0.16668	0.014394	0.0044747	0.0028689	0.0020702	0.0015934	0.0012782	0.99811	27	

coverage	high_quality_coverage_count	
0	154205
1	83855
2	71621
3	72804
4	75780
5	80009
6	84623
7	92513
8	100339
9	109283
10	120206
11	134288
12	151280
13	173061
14	200762
15	241944
16	301797
17	393245
18	523709
19	713019
20	981964
21	1344099
22	1823802
23	2432233
24	3161854
25	4008820
26	4939921
27	5914297
28	6869879
29	7758135
30	8509385
31	9069619
32	9402075
33	9503123
34	9343137
35	8964858
36	8390607
37	7662633
38	6839575
39	5960916
40	5091931
41	4257405
42	3495224
43	2803418
44	2212815
45	1716671
46	1314456
47	990926
48	737996
49	544658
50	400783
51	293441
52	216332
53	161157
54	121234
55	92736
56	73175
57	58982
58	49193
59	41863
60	36439
61	32095
62	28917
63	25826
64	24070
65	21860
66	20777
67	19215
68	18032
69	17034
70	15852
71	14878
72	13748
73	13050
74	12073
75	11558
76	10957
77	10387
78	9641
79	9356
80	8796
81	8465
82	8029
83	7591
84	7390
85	6916
86	6575
87	6549
88	6232
89	5976
90	5769
91	5442
92	5046
93	4897
94	4792
95	4698
96	4556
97	4366
98	4220
99	4169
100	3934
101	3973
102	3746
103	3564
104	3439
105	3391
106	3255
107	3112
108	3053
109	3131
110	2906
111	2835
112	2730
113	2724
114	2741
115	2691
116	2509
117	2512
118	2449
119	2324
120	2221
121	2178
122	2177
123	2136
124	2069
125	2075
126	2007
127	1895
128	1904
129	1900
130	1843
131	1716
132	1764
133	1656
134	1578
135	1584
136	1584
137	1494
138	1453
139	1389
140	1368
141	1413
142	1354
143	1384
144	1301
145	1261
146	1223
147	1222
148	1188
149	1130
150	1084
151	1119
152	1116
153	1050
154	1048
155	982
156	978
157	874
158	899
159	858
160	852
161	773
162	837
163	788
164	732
165	722
166	747
167	707
168	714
169	716
170	739
171	655
172	692
173	681
174	630
175	660
176	625
177	690
178	688
179	609
180	639
181	658
182	616
183	578
184	557
185	543
186	550
187	464
188	550
189	514
190	496
191	491
192	495
193	521
194	554
195	487
196	498
197	479
198	534
199	526
200	494
201	480
202	485
203	480
204	456
205	445
206	435
207	396
208	422
209	405
210	396
211	417
212	397
213	348
214	330
215	343
216	355
217	343
218	324
219	322
220	327
221	306
222	308
223	266
224	278
225	323
226	293
227	286
228	272
229	251
230	257
231	277
232	273
233	267
234	284
235	283
236	234
237	261
238	240
239	230
240	262
241	229
242	256
243	215
244	223
245	270
246	243
247	204
248	242
249	252
250	32945