#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP00672/HGDP00672.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP00672/QCmetrics/HGDP00672.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	32.335	8.3115	32	4	0	0.065191	0.0017298	0.047441	0.0017391	0.0004018	0.1165	0.99905	0.99696	0.99332	0.98654	0.96611	0.88248	0.66323	0.13688	0.011202	0.003431	0.0021033	0.001503	0.0011409	0.00089324	0.9981	27	

coverage	high_quality_coverage_count	
0	144321
1	81138
2	74314
3	78230
4	83877
5	90278
6	97988
7	109263
8	121866
9	134976
10	152247
11	171430
12	197714
13	232432
14	277607
15	342268
16	431312
17	564507
18	752317
19	1016491
20	1375736
21	1842940
22	2424934
23	3131669
24	3946657
25	4849390
26	5800663
27	6737209
28	7607582
29	8355769
30	8924050
31	9272970
32	9405136
33	9285667
34	8936892
35	8399844
36	7699556
37	6904260
38	6049947
39	5186913
40	4356698
41	3590454
42	2898767
43	2297045
44	1790407
45	1369611
46	1039531
47	776567
48	575420
49	423515
50	311675
51	228465
52	167839
53	125030
54	94605
55	73531
56	58443
57	47989
58	39900
59	34586
60	30289
61	26923
62	23643
63	21896
64	20281
65	18484
66	17038
67	15743
68	14283
69	13382
70	12322
71	11224
72	10348
73	9800
74	9129
75	8500
76	8075
77	7717
78	7212
79	6991
80	6784
81	6462
82	5945
83	5731
84	5585
85	5213
86	5095
87	4843
88	4839
89	4584
90	4588
91	4327
92	4185
93	3964
94	3784
95	3586
96	3373
97	3315
98	3276
99	3270
100	3141
101	3056
102	3015
103	2874
104	2798
105	2679
106	2690
107	2571
108	2438
109	2282
110	2322
111	2216
112	2177
113	2098
114	2026
115	1959
116	1882
117	1790
118	1727
119	1759
120	1573
121	1547
122	1519
123	1517
124	1512
125	1492
126	1424
127	1388
128	1363
129	1370
130	1385
131	1280
132	1237
133	1190
134	1183
135	1167
136	1172
137	1107
138	1084
139	1031
140	1055
141	1033
142	1003
143	981
144	928
145	918
146	909
147	841
148	810
149	781
150	745
151	693
152	705
153	714
154	701
155	679
156	651
157	602
158	579
159	601
160	601
161	566
162	526
163	584
164	550
165	603
166	578
167	558
168	567
169	557
170	476
171	524
172	491
173	439
174	459
175	460
176	425
177	478
178	465
179	432
180	406
181	395
182	376
183	395
184	375
185	346
186	376
187	352
188	401
189	355
190	384
191	378
192	375
193	344
194	375
195	341
196	333
197	330
198	300
199	293
200	287
201	260
202	293
203	238
204	287
205	282
206	249
207	258
208	246
209	255
210	239
211	260
212	252
213	244
214	225
215	272
216	258
217	241
218	208
219	208
220	237
221	212
222	242
223	226
224	235
225	236
226	221
227	234
228	225
229	184
230	230
231	237
232	205
233	200
234	181
235	185
236	210
237	164
238	209
239	165
240	176
241	172
242	189
243	189
244	174
245	167
246	189
247	183
248	170
249	147
250	17279