#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta -i HGDP/HGDP00699/HGDP00699.cram --algo MeanQualityByCycle HGDP/HGDP00699/QCmetrics/HGDP00699.MeanQualityByCycle.txt CYCLE MEAN_QUALITY 1 31.345530 2 31.672867 3 36.161421 4 36.476485 5 36.601824 6 41.111753 7 41.227576 8 41.287550 9 41.310101 10 41.322866 11 41.320977 12 41.325423 13 41.307289 14 41.311713 15 41.312346 16 41.306228 17 41.302016 18 41.294879 19 41.288712 20 41.270849 21 41.266000 22 41.253535 23 41.227634 24 41.205288 25 41.192781 26 41.121058 27 41.089998 28 41.066145 29 41.055964 30 41.037570 31 41.010242 32 40.988602 33 40.993172 34 40.973486 35 40.963221 36 40.960699 37 40.944742 38 40.931699 39 40.922741 40 40.909389 41 40.883669 42 40.875937 43 40.849644 44 40.842392 45 40.823172 46 40.814614 47 40.797463 48 40.782750 49 40.769286 50 40.750940 51 40.741822 52 40.718046 53 40.694868 54 40.675027 55 40.670323 56 40.651844 57 40.643005 58 40.619835 59 40.579266 60 40.575273 61 40.552400 62 40.532881 63 40.517787 64 40.487363 65 40.472207 66 40.454213 67 40.432219 68 40.405997 69 40.396232 70 40.378553 71 40.358982 72 40.316300 73 40.290436 74 40.271284 75 40.234780 76 39.521623 77 39.964522 78 40.156679 79 40.222620 80 40.231279 81 40.241214 82 40.234089 83 40.213785 84 40.197758 85 40.183735 86 40.156910 87 40.096692 88 40.069852 89 40.054656 90 40.027142 91 40.005115 92 39.974465 93 39.945858 94 39.892827 95 39.870603 96 39.842017 97 39.816307 98 39.770997 99 39.737841 100 39.682731 101 39.635112 102 39.587648 103 39.537589 104 39.495306 105 39.460078 106 39.382739 107 39.307213 108 39.226950 109 39.137229 110 39.082412 111 39.020774 112 38.959294 113 38.907034 114 38.857576 115 38.771011 116 38.693512 117 38.618457 118 38.522403 119 38.456176 120 38.377122 121 38.299518 122 38.210361 123 38.121987 124 38.011887 125 37.890168 126 37.769138 127 37.686729 128 37.553697 129 37.442805 130 37.325863 131 37.230095 132 37.118180 133 37.004036 134 36.885659 135 36.760565 136 36.610822 137 36.507169 138 36.408661 139 36.300998 140 36.193655 141 36.081262 142 35.921538 143 35.766357 144 35.638262 145 35.517057 146 35.367761 147 35.244942 148 35.118432 149 34.986796 150 34.814679 151 30.617300 152 30.543411 153 30.981388 154 35.123320 155 35.378827 156 35.664349 157 39.683374 158 39.711969 159 39.811245 160 39.957232 161 40.081495 162 40.059027 163 40.041186 164 40.060961 165 40.041760 166 39.973291 167 39.937009 168 39.900131 169 39.844457 170 39.858497 171 39.822215 172 39.791375 173 39.748004 174 39.723370 175 39.706505 176 39.680739 177 39.659486 178 39.640072 179 39.577025 180 39.623744 181 39.579429 182 39.566309 183 39.547066 184 39.508577 185 39.493053 186 39.463016 187 39.420570 188 39.361804 189 39.333674 190 39.321565 191 39.293869 192 39.244485 193 39.258839 194 39.143059 195 39.063699 196 38.992181 197 38.977138 198 38.937239 199 38.910598 200 38.863915 201 38.811898 202 38.729735 203 38.724664 204 38.704113 205 38.659842 206 38.647017 207 38.592537 208 38.529325 209 38.485941 210 38.437183 211 38.414848 212 38.378544 213 38.339048 214 38.315365 215 38.219568 216 38.215927 217 38.148501 218 38.134157 219 38.070009 220 38.021579 221 37.993098 222 37.968042 223 37.892302 224 37.857383 225 37.813684 226 37.723721 227 36.550571 228 37.268121 229 37.642615 230 37.770908 231 37.793437 232 37.770603 233 37.757901 234 37.686034 235 37.640309 236 37.532782 237 37.479237 238 37.420159 239 37.316001 240 37.242160 241 37.138451 242 37.053578 243 36.921942 244 36.819541 245 36.738338 246 36.620641 247 36.542755 248 36.420487 249 36.275322 250 36.199036 251 36.099549 252 35.983902 253 35.856364 254 35.745174 255 35.593024 256 35.465142 257 35.332307 258 35.173882 259 35.042118 260 34.881843 261 34.705295 262 34.542061 263 34.392665 264 34.231993 265 34.017199 266 33.884835 267 33.739767 268 33.615796 269 33.452636 270 33.314652 271 33.115065 272 32.960722 273 32.791420 274 32.612221 275 32.452115 276 32.284272 277 32.071064 278 31.908572 279 31.709816 280 31.533135 281 31.369437 282 31.204291 283 31.073281 284 30.960310 285 30.794348 286 30.670612 287 30.530913 288 30.360986 289 30.183454 290 30.032851 291 29.887945 292 29.720821 293 29.587372 294 29.386949 295 29.244745 296 29.113620 297 28.928720 298 28.797865 299 28.558981 300 28.400591 301 28.235855 302 24.077754