#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP00699/HGDP00699.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP00699/QCmetrics/HGDP00699.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	31.327	7.9231	31	4	0	0.1452	0.0028609	0.03833	0.0023798	0.00021417	0.18898	0.99926	0.99725	0.99392	0.98745	0.96373	0.85999	0.60554	0.098351	0.0088255	0.0037102	0.0022281	0.0014598	0.0010273	0.00075872	0.99838	28	

coverage	high_quality_coverage_count	
0	112185
1	80047
2	73164
3	73411
4	79115
5	84355
6	91443
7	99475
8	108775
9	122236
10	138591
11	158725
12	185162
13	223865
14	277827
15	356554
16	474046
17	646803
18	892141
19	1239320
20	1703127
21	2296059
22	3029890
23	3890319
24	4861518
25	5878184
26	6911704
27	7873826
28	8708580
29	9332512
30	9699671
31	9818008
32	9660668
33	9242026
34	8620786
35	7841717
36	6963060
37	6016952
38	5087941
39	4200031
40	3399256
41	2697350
42	2097786
43	1604269
44	1203921
45	895004
46	654926
47	475163
48	342657
49	247705
50	181397
51	134259
52	102256
53	80334
54	65782
55	54703
56	47324
57	41130
58	37190
59	33734
60	30635
61	28217
62	26387
63	24501
64	23086
65	20994
66	19671
67	18352
68	17282
69	16322
70	15469
71	14337
72	13580
73	12493
74	11880
75	11116
76	10275
77	9869
78	9166
79	8684
80	8305
81	7935
82	7560
83	7133
84	6616
85	6328
86	5913
87	5602
88	5259
89	5149
90	4877
91	4613
92	4447
93	4377
94	4161
95	4113
96	3905
97	3762
98	3342
99	3251
100	3069
101	3007
102	2851
103	2704
104	2672
105	2531
106	2428
107	2252
108	2165
109	2051
110	2060
111	2003
112	1910
113	1820
114	1763
115	1634
116	1617
117	1577
118	1513
119	1461
120	1452
121	1430
122	1418
123	1316
124	1362
125	1306
126	1256
127	1257
128	1191
129	1227
130	1169
131	1207
132	1077
133	1001
134	958
135	913
136	880
137	874
138	823
139	801
140	824
141	853
142	777
143	796
144	756
145	739
146	693
147	734
148	705
149	601
150	650
151	583
152	647
153	566
154	598
155	597
156	532
157	531
158	545
159	501
160	507
161	511
162	489
163	495
164	442
165	422
166	430
167	451
168	461
169	434
170	441
171	428
172	406
173	383
174	353
175	369
176	371
177	372
178	355
179	366
180	344
181	308
182	359
183	361
184	291
185	364
186	329
187	356
188	309
189	294
190	234
191	303
192	282
193	258
194	241
195	256
196	277
197	270
198	266
199	283
200	266
201	243
202	242
203	225
204	255
205	223
206	225
207	222
208	228
209	199
210	212
211	209
212	201
213	225
214	184
215	170
216	184
217	199
218	222
219	207
220	186
221	187
222	198
223	175
224	182
225	183
226	187
227	161
228	175
229	155
230	166
231	181
232	137
233	168
234	139
235	116
236	144
237	115
238	138
239	115
240	124
241	116
242	116
243	120
244	128
245	129
246	120
247	115
248	110
249	112
250	12968