#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP00765/HGDP00765.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP00765/QCmetrics/HGDP00765.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	30.746	7.7787	31	4	0	0.19753	0.0018705	0.034897	0.0013687	0.00016517	0.23583	0.99907	0.99693	0.99345	0.98698	0.95985	0.8407	0.56913	0.084303	0.0074286	0.002901	0.0017032	0.0011491	0.00084374	0.00067227	0.99813	27	

coverage	high_quality_coverage_count	
0	141880
1	85424
2	77561
3	78965
4	83346
5	89278
6	97313
7	105478
8	114074
9	123714
10	138375
11	155495
12	181253
13	221954
14	286092
15	381856
16	524324
17	736270
18	1036281
19	1447878
20	1994241
21	2682038
22	3511205
23	4457745
24	5480404
25	6540549
26	7540677
27	8435653
28	9151501
29	9639954
30	9860721
31	9796369
32	9483416
33	8933660
34	8190820
35	7328578
36	6400272
37	5467789
38	4563138
39	3725118
40	2975933
41	2333774
42	1800490
43	1363286
44	1019908
45	751219
46	549005
47	399363
48	288954
49	211755
50	156681
51	118632
52	91073
53	72531
54	59096
55	49924
56	42592
57	36783
58	32423
59	28977
60	26420
61	24134
62	21934
63	19909
64	18341
65	16825
66	15490
67	14175
68	12853
69	12127
70	11245
71	10484
72	9623
73	9035
74	8623
75	7931
76	7615
77	6864
78	6594
79	6265
80	5746
81	5446
82	5375
83	5024
84	4790
85	4564
86	4221
87	4036
88	3703
89	3546
90	3175
91	3063
92	2888
93	2663
94	2553
95	2604
96	2388
97	2374
98	2185
99	2190
100	2152
101	2019
102	1973
103	1890
104	1815
105	1721
106	1680
107	1700
108	1685
109	1575
110	1435
111	1480
112	1495
113	1458
114	1397
115	1353
116	1279
117	1293
118	1264
119	1226
120	1160
121	1177
122	1196
123	1171
124	1143
125	1158
126	1142
127	1145
128	1124
129	1135
130	1110
131	1065
132	1037
133	984
134	928
135	954
136	837
137	852
138	810
139	773
140	735
141	716
142	744
143	729
144	667
145	708
146	690
147	673
148	734
149	648
150	605
151	653
152	642
153	625
154	557
155	542
156	541
157	543
158	522
159	477
160	465
161	528
162	484
163	492
164	488
165	451
166	462
167	435
168	445
169	395
170	411
171	397
172	404
173	402
174	361
175	400
176	364
177	368
178	349
179	327
180	352
181	393
182	364
183	363
184	375
185	368
186	379
187	353
188	323
189	366
190	350
191	368
192	337
193	320
194	307
195	311
196	314
197	298
198	272
199	266
200	254
201	295
202	257
203	276
204	275
205	245
206	283
207	259
208	241
209	249
210	235
211	220
212	215
213	211
214	230
215	210
216	232
217	238
218	235
219	211
220	193
221	194
222	184
223	177
224	180
225	176
226	134
227	181
228	162
229	157
230	155
231	161
232	192
233	199
234	195
235	174
236	187
237	188
238	159
239	191
240	167
241	162
242	175
243	181
244	178
245	169
246	191
247	164
248	166
249	178
250	11372