#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.autosome-PAR.interval_list -i HGDP/HGDP00821/HGDP00821.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP00821/QCmetrics/HGDP00821.WgsMetrics.autosome.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 2747965384 31.942 11.093 31 4 0 0.24714 0.0012285 0.026696 0.0048642 0.013205 0.29314 0.99877 0.99624 0.99312 0.98719 0.964 0.86269 0.61719 0.11353 0.013833 0.0074402 0.0054871 0.0042894 0.0034768 0.0028899 0.99773 26 coverage high_quality_coverage_count 0 3377953 1 2047299 2 1724307 3 1609280 4 1561512 5 1558425 6 1604842 7 1673527 8 1790882 9 1961728 10 2222196 11 2567004 12 3051681 13 3728802 14 4711545 15 6154284 16 8290351 17 11416321 18 15851045 19 22014569 20 30225685 21 40717109 22 53551501 23 68591561 24 85319167 25 102968909 26 120628129 27 137140926 28 151434442 29 162461756 30 169512749 31 172098331 32 170210278 33 164063459 34 154202068 35 141446152 36 126743794 37 110967750 38 95074975 39 79707991 40 65511067 41 52825372 42 41794181 43 32506499 44 24888346 45 18797949 46 14026788 47 10379625 48 7634298 49 5605596 50 4133906 51 3082410 52 2340086 53 1822712 54 1461600 55 1213034 56 1036434 57 911308 58 817937 59 746529 60 690953 61 644305 62 604999 63 570541 64 539264 65 511549 66 485686 67 462109 68 439375 69 418374 70 400124 71 380049 72 364301 73 347872 74 332318 75 319329 76 304232 77 291985 78 279953 79 271006 80 261001 81 251701 82 242240 83 232853 84 224747 85 218002 86 210176 87 204073 88 197492 89 190785 90 185610 91 179198 92 174436 93 168142 94 163272 95 158600 96 153589 97 147271 98 143745 99 138876 100 134285 101 130776 102 126594 103 123206 104 119690 105 115531 106 112516 107 109163 108 105620 109 101891 110 99924 111 97459 112 93971 113 91597 114 89461 115 86512 116 84694 117 82005 118 79451 119 78266 120 76122 121 73709 122 71980 123 69985 124 68233 125 67370 126 64744 127 63498 128 62272 129 60973 130 59177 131 58038 132 56860 133 55648 134 55117 135 53779 136 52353 137 51127 138 50503 139 49120 140 48697 141 47668 142 46975 143 45926 144 45372 145 44083 146 43309 147 43031 148 41775 149 41143 150 40501 151 39647 152 38773 153 38287 154 37996 155 37170 156 36368 157 36031 158 35502 159 34877 160 34013 161 33472 162 32987 163 32146 164 31794 165 31265 166 30773 167 29912 168 29608 169 28388 170 28564 171 27761 172 27394 173 26914 174 26753 175 26266 176 25888 177 25638 178 25142 179 25083 180 24620 181 24135 182 23898 183 23462 184 23261 185 23208 186 22690 187 22193 188 21748 189 21438 190 21417 191 21038 192 20336 193 20602 194 20383 195 19861 196 19589 197 19379 198 18836 199 18933 200 18532 201 18351 202 18192 203 18175 204 17653 205 17736 206 17361 207 17235 208 17079 209 17007 210 16745 211 16699 212 16441 213 16060 214 15982 215 15875 216 15594 217 15307 218 15277 219 14954 220 14926 221 14422 222 14513 223 14328 224 14283 225 14143 226 13898 227 13570 228 13582 229 13446 230 13203 231 13075 232 12796 233 12740 234 12755 235 12683 236 12292 237 12192 238 11981 239 11951 240 11720 241 11694 242 11513 243 11397 244 11251 245 11078 246 11105 247 11009 248 10777 249 10705 250 2108867