#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta -i HGDP/HGDP00859/HGDP00859.cram --algo MeanQualityByCycle HGDP/HGDP00859/QCmetrics/HGDP00859.MeanQualityByCycle.txt CYCLE MEAN_QUALITY 1 31.271429 2 31.618014 3 36.027151 4 36.409914 5 36.567997 6 41.022055 7 41.122693 8 41.186981 9 41.205513 10 41.222769 11 41.216480 12 41.229500 13 41.200466 14 41.196197 15 41.207464 16 41.202528 17 41.198285 18 41.182639 19 41.180927 20 41.157075 21 41.138575 22 41.140361 23 41.120942 24 41.104047 25 41.066469 26 40.986067 27 40.942741 28 40.931532 29 40.933376 30 40.899161 31 40.891296 32 40.832466 33 40.844961 34 40.828873 35 40.796335 36 40.788279 37 40.775677 38 40.772867 39 40.747953 40 40.740687 41 40.734849 42 40.725657 43 40.712322 44 40.697421 45 40.691619 46 40.645523 47 40.645306 48 40.647544 49 40.630655 50 40.608949 51 40.606166 52 40.566382 53 40.550932 54 40.545283 55 40.527027 56 40.510517 57 40.468137 58 40.463361 59 40.456904 60 40.412614 61 40.413459 62 40.400787 63 40.374901 64 40.369747 65 40.329805 66 40.280847 67 40.268512 68 40.255291 69 40.250886 70 40.216970 71 40.208164 72 40.186960 73 40.136263 74 40.111724 75 40.088169 76 39.252001 77 39.741499 78 39.971184 79 40.062532 80 40.093556 81 40.089256 82 40.053454 83 40.039174 84 40.026037 85 39.987481 86 39.971747 87 39.942887 88 39.906406 89 39.896279 90 39.849479 91 39.786565 92 39.770947 93 39.762852 94 39.710241 95 39.661501 96 39.619047 97 39.609207 98 39.546196 99 39.526036 100 39.457811 101 39.438181 102 39.340605 103 39.350970 104 39.273186 105 39.244604 106 39.184895 107 39.160638 108 39.047407 109 38.988308 110 38.955290 111 38.883542 112 38.779230 113 38.731381 114 38.652603 115 38.583051 116 38.454366 117 38.408503 118 38.313535 119 38.250609 120 38.141267 121 38.053279 122 37.984836 123 37.897470 124 37.822556 125 37.688983 126 37.602182 127 37.499270 128 37.431590 129 37.332347 130 37.159972 131 37.083779 132 36.962219 133 36.835153 134 36.736410 135 36.662223 136 36.562206 137 36.452769 138 36.321528 139 36.212670 140 36.091240 141 35.949059 142 35.848171 143 35.701036 144 35.531485 145 35.402012 146 35.274728 147 35.125421 148 34.991865 149 34.853638 150 34.711530 151 30.872939 152 30.689381 153 30.810584 154 34.809992 155 35.640758 156 35.868536 157 40.038903 158 40.057483 159 40.128480 160 40.230591 161 40.268789 162 40.265428 163 40.218255 164 40.098855 165 40.153518 166 40.128924 167 40.056818 168 40.008135 169 39.985871 170 40.021509 171 39.980902 172 39.864286 173 39.907084 174 39.856061 175 39.837172 176 39.803620 177 39.772783 178 39.812179 179 39.698787 180 39.760270 181 39.682620 182 39.590929 183 39.627404 184 39.559928 185 39.570968 186 39.529459 187 39.419001 188 39.373127 189 39.389298 190 39.446912 191 39.387290 192 39.234376 193 39.235196 194 39.152506 195 39.084326 196 39.079286 197 38.975042 198 38.961140 199 38.924328 200 38.892805 201 38.836106 202 38.774886 203 38.705271 204 38.731035 205 38.693218 206 38.641623 207 38.606087 208 38.577728 209 38.535209 210 38.507788 211 38.465240 212 38.399662 213 38.397425 214 38.335100 215 38.308415 216 38.274208 217 38.229233 218 38.195171 219 38.170372 220 38.063360 221 38.061859 222 38.007975 223 37.951433 224 37.853119 225 37.847089 226 37.749263 227 36.441902 228 37.204743 229 37.610371 230 37.765148 231 37.797559 232 37.776215 233 37.719399 234 37.687053 235 37.648852 236 37.577592 237 37.473571 238 37.421949 239 37.323211 240 37.246669 241 37.114254 242 37.056799 243 36.967578 244 36.829534 245 36.748085 246 36.668125 247 36.535343 248 36.411451 249 36.321674 250 36.256782 251 36.180314 252 35.996042 253 35.863206 254 35.703121 255 35.523263 256 35.445905 257 35.364104 258 35.209340 259 35.063433 260 34.917989 261 34.762114 262 34.647696 263 34.536915 264 34.406721 265 34.257206 266 34.098421 267 33.966275 268 33.812877 269 33.618703 270 33.481767 271 33.333468 272 33.208376 273 33.036684 274 32.806635 275 32.661852 276 32.515511 277 32.370775 278 32.217319 279 32.054676 280 31.840886 281 31.742520 282 31.616963 283 31.466083 284 31.324885 285 31.120548 286 30.992423 287 30.860463 288 30.720656 289 30.542496 290 30.387418 291 30.202249 292 30.065882 293 29.959432 294 29.821936 295 29.609965 296 29.524921 297 29.376302 298 29.214533 299 29.091941 300 28.883793 301 28.668525 302 24.602401