#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP00864/HGDP00864.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP00864/QCmetrics/HGDP00864.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	31.38	8.013	31	4	0	0.099964	0.0020766	0.040341	0.003662	0.00047245	0.14652	0.99916	0.99682	0.9929	0.98562	0.96069	0.85706	0.60831	0.10575	0.0091738	0.0032547	0.00196	0.0013183	0.00093918	0.00071219	0.99811	27	

coverage	high_quality_coverage_count	
0	128391
1	90260
2	86387
3	86439
4	91783
5	98202
6	107162
7	116689
8	130008
9	145166
10	159415
11	182003
12	211154
13	249547
14	305141
15	388053
16	508868
17	685617
18	933879
19	1275704
20	1737052
21	2322242
22	3035139
23	3868198
24	4801470
25	5788701
26	6766038
27	7694619
28	8492375
29	9095459
30	9464140
31	9581854
32	9452970
33	9094983
34	8518344
35	7792103
36	6956785
37	6070149
38	5183444
39	4332183
40	3544570
41	2846564
42	2241666
43	1739769
44	1326483
45	998894
46	745282
47	548005
48	403363
49	296168
50	218897
51	162757
52	122518
53	94913
54	75345
55	61224
56	51095
57	43310
58	37435
59	32880
60	29058
61	26155
62	24284
63	21644
64	19740
65	17870
66	16309
67	14750
68	13955
69	13184
70	12329
71	11859
72	10949
73	10464
74	9879
75	9452
76	8899
77	8459
78	7823
79	7499
80	7032
81	6824
82	6442
83	6218
84	5979
85	5521
86	5357
87	5036
88	4756
89	4498
90	4452
91	4034
92	3795
93	3674
94	3413
95	3283
96	3087
97	3027
98	2922
99	2841
100	2681
101	2648
102	2506
103	2399
104	2356
105	2286
106	2038
107	2135
108	1975
109	1878
110	1890
111	1816
112	1698
113	1680
114	1657
115	1585
116	1517
117	1519
118	1350
119	1364
120	1346
121	1304
122	1273
123	1320
124	1290
125	1230
126	1192
127	1114
128	1149
129	1084
130	1110
131	1015
132	995
133	956
134	957
135	918
136	904
137	872
138	817
139	815
140	768
141	759
142	723
143	713
144	696
145	682
146	697
147	688
148	674
149	650
150	697
151	627
152	609
153	648
154	594
155	591
156	538
157	508
158	519
159	526
160	473
161	495
162	515
163	483
164	477
165	425
166	446
167	418
168	408
169	434
170	399
171	412
172	405
173	396
174	367
175	380
176	413
177	331
178	340
179	350
180	353
181	331
182	383
183	324
184	325
185	312
186	286
187	302
188	301
189	312
190	296
191	344
192	278
193	307
194	274
195	260
196	272
197	252
198	233
199	250
200	212
201	219
202	177
203	183
204	188
205	187
206	152
207	191
208	187
209	161
210	160
211	173
212	150
213	147
214	171
215	163
216	140
217	149
218	143
219	130
220	109
221	121
222	131
223	106
224	98
225	119
226	134
227	98
228	120
229	117
230	135
231	155
232	144
233	124
234	122
235	117
236	101
237	119
238	122
239	107
240	100
241	99
242	100
243	93
244	97
245	101
246	108
247	110
248	109
249	93
250	13635