#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP00865/HGDP00865.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP00865/QCmetrics/HGDP00865.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	35.445	9.0472	35	5	0	0.11758	0.0020918	0.039566	0.0029307	0.00031748	0.16248	0.99905	0.99704	0.99416	0.98953	0.97833	0.93676	0.80211	0.26799	0.029245	0.0072473	0.0044794	0.0029566	0.0020223	0.0014361	0.99819	27	

coverage	high_quality_coverage_count	
0	144926
1	86627
2	73652
3	72320
4	73434
5	76632
6	81058
7	85919
8	93225
9	100700
10	110520
11	122021
12	136163
13	155686
14	179652
15	212263
16	258331
17	315617
18	401136
19	516723
20	675732
21	891704
22	1179733
23	1551122
24	2025119
25	2593917
26	3270223
27	4034191
28	4864868
29	5718194
30	6566723
31	7337161
32	7997084
33	8514942
34	8834395
35	8950380
36	8865429
37	8572800
38	8110163
39	7498938
40	6787778
41	6018880
42	5222232
43	4443405
44	3714314
45	3042786
46	2453677
47	1946313
48	1518849
49	1168158
50	885777
51	666766
52	495711
53	369713
54	275450
55	206216
56	155284
57	119769
58	94467
59	76958
60	64201
61	55278
62	48611
63	44661
64	40557
65	37796
66	35162
67	33278
68	31525
69	29971
70	28597
71	27417
72	25877
73	24629
74	23566
75	22420
76	21217
77	20146
78	19450
79	18308
80	17890
81	16821
82	15935
83	15226
84	14296
85	13646
86	12870
87	12484
88	11846
89	11113
90	10523
91	10198
92	9718
93	9448
94	9293
95	8759
96	8235
97	7974
98	7585
99	7443
100	7042
101	6735
102	6590
103	6397
104	6075
105	5729
106	5523
107	5140
108	5093
109	4792
110	4368
111	4300
112	4180
113	4031
114	3907
115	3779
116	3754
117	3549
118	3447
119	3364
120	3153
121	3004
122	2747
123	2718
124	2710
125	2502
126	2422
127	2379
128	2350
129	2094
130	2132
131	2073
132	1977
133	1847
134	1832
135	1807
136	1700
137	1696
138	1625
139	1546
140	1494
141	1536
142	1353
143	1351
144	1276
145	1298
146	1238
147	1193
148	1211
149	1178
150	1104
151	1061
152	1050
153	1065
154	1045
155	1009
156	929
157	929
158	973
159	951
160	862
161	889
162	885
163	834
164	820
165	825
166	766
167	723
168	711
169	747
170	711
171	677
172	752
173	668
174	652
175	684
176	643
177	613
178	563
179	592
180	550
181	558
182	557
183	534
184	509
185	476
186	486
187	475
188	471
189	442
190	498
191	478
192	433
193	419
194	431
195	390
196	399
197	420
198	408
199	418
200	410
201	390
202	408
203	399
204	352
205	337
206	332
207	335
208	317
209	307
210	345
211	297
212	296
213	294
214	273
215	271
216	279
217	289
218	243
219	268
220	244
221	261
222	289
223	259
224	264
225	239
226	286
227	249
228	238
229	211
230	239
231	228
232	250
233	257
234	292
235	273
236	247
237	199
238	238
239	222
240	243
241	233
242	234
243	232
244	227
245	211
246	223
247	231
248	247
249	229
250	15386