#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP00871/HGDP00871.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP00871/QCmetrics/HGDP00871.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 33.223 9.8494 33 4 0 0.11506 0.0016867 0.035595 0.0037904 0.00091061 0.15705 0.99914 0.9972 0.99465 0.99022 0.97443 0.9003 0.69188 0.15718 0.01877 0.0088701 0.0063455 0.0046317 0.0033945 0.0025598 0.99834 28 coverage high_quality_coverage_count 0 130702 1 82171 2 72918 3 69649 4 70096 5 70997 6 74035 7 76380 8 79758 9 86970 10 98333 11 109913 12 127261 13 151908 14 186300 15 237865 16 315491 17 428487 18 592962 19 827953 20 1152282 21 1584219 22 2133932 23 2808031 24 3597686 25 4484021 26 5430418 27 6384969 28 7304947 29 8098979 30 8738909 31 9179237 32 9389877 33 9353388 34 9067981 35 8595543 36 7951717 37 7191148 38 6359412 39 5508409 40 4671921 41 3883310 42 3164920 43 2537978 44 1992209 45 1548751 46 1184319 47 897475 48 671607 49 501403 50 371865 51 277953 52 208088 53 158536 54 123847 55 98591 56 82040 57 69846 58 60814 59 54344 60 49084 61 45196 62 42871 63 39585 64 37570 65 36349 66 35385 67 33981 68 32603 69 31412 70 29739 71 28611 72 27376 73 26942 74 26292 75 25848 76 24951 77 24602 78 23500 79 22820 80 21938 81 21002 82 20454 83 19787 84 19234 85 18423 86 17866 87 17297 88 16260 89 15942 90 15111 91 14574 92 13964 93 13230 94 12889 95 12335 96 11793 97 11453 98 11034 99 10582 100 10275 101 9966 102 9610 103 9368 104 9060 105 8907 106 8377 107 8312 108 8100 109 7708 110 7630 111 7411 112 7207 113 7002 114 6962 115 6874 116 6821 117 6591 118 6483 119 6176 120 5843 121 5723 122 5528 123 5285 124 4983 125 4869 126 4827 127 4642 128 4357 129 4150 130 4059 131 3743 132 3591 133 3490 134 3435 135 3159 136 3033 137 2931 138 3031 139 2787 140 2639 141 2646 142 2622 143 2565 144 2503 145 2420 146 2481 147 2346 148 2245 149 2179 150 2231 151 2060 152 2037 153 1945 154 2073 155 1880 156 1850 157 1770 158 1735 159 1709 160 1745 161 1592 162 1519 163 1481 164 1468 165 1435 166 1384 167 1309 168 1313 169 1342 170 1322 171 1184 172 1260 173 1215 174 1294 175 1235 176 1208 177 1125 178 1209 179 1140 180 1145 181 1063 182 1129 183 1058 184 1013 185 975 186 980 187 982 188 938 189 889 190 868 191 810 192 831 193 819 194 776 195 820 196 710 197 780 198 698 199 730 200 723 201 684 202 677 203 681 204 651 205 632 206 609 207 562 208 565 209 617 210 568 211 565 212 552 213 538 214 566 215 536 216 485 217 506 218 492 219 529 220 532 221 487 222 494 223 499 224 510 225 476 226 463 227 468 228 481 229 488 230 475 231 462 232 476 233 429 234 443 235 429 236 399 237 405 238 387 239 379 240 388 241 373 242 376 243 337 244 396 245 324 246 329 247 347 248 302 249 315 250 33942