#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta -i HGDP/HGDP00906/HGDP00906.cram --algo MeanQualityByCycle HGDP/HGDP00906/QCmetrics/HGDP00906.MeanQualityByCycle.txt CYCLE MEAN_QUALITY 1 31.178059 2 31.640946 3 36.039289 4 36.412019 5 36.590949 6 41.062102 7 41.150003 8 41.222250 9 41.242519 10 41.271943 11 41.274382 12 41.268754 13 41.261800 14 41.252686 15 41.251031 16 41.245774 17 41.240674 18 41.235748 19 41.221750 20 41.196751 21 41.198515 22 41.172028 23 41.156721 24 41.142632 25 41.101161 26 41.047795 27 41.018345 28 40.984138 29 40.978849 30 40.952021 31 40.947383 32 40.944236 33 40.923955 34 40.923698 35 40.908019 36 40.899559 37 40.843120 38 40.830182 39 40.835067 40 40.838755 41 40.803224 42 40.789410 43 40.765329 44 40.772575 45 40.757394 46 40.741434 47 40.734419 48 40.723010 49 40.715171 50 40.659844 51 40.675898 52 40.667764 53 40.655535 54 40.637756 55 40.588363 56 40.566372 57 40.539377 58 40.547959 59 40.529435 60 40.508031 61 40.507290 62 40.478518 63 40.478486 64 40.451551 65 40.423440 66 40.411374 67 40.376765 68 40.355300 69 40.322142 70 40.317944 71 40.297469 72 40.275062 73 40.264398 74 40.207129 75 40.176265 76 39.438517 77 39.857852 78 40.077039 79 40.146770 80 40.177692 81 40.192039 82 40.170518 83 40.129476 84 40.134778 85 40.106372 86 40.071504 87 40.053134 88 40.014609 89 39.987242 90 39.941023 91 39.933808 92 39.907904 93 39.870160 94 39.808076 95 39.765962 96 39.765419 97 39.732134 98 39.695612 99 39.678576 100 39.660581 101 39.615944 102 39.550334 103 39.471956 104 39.425606 105 39.366787 106 39.341093 107 39.324502 108 39.242476 109 39.183780 110 39.122959 111 39.059543 112 38.986730 113 38.886539 114 38.825292 115 38.762656 116 38.677556 117 38.602039 118 38.507446 119 38.428917 120 38.343529 121 38.303136 122 38.214379 123 38.144713 124 38.043777 125 37.950721 126 37.847136 127 37.722994 128 37.597359 129 37.502624 130 37.389518 131 37.250609 132 37.145111 133 37.023465 134 36.870499 135 36.773066 136 36.683791 137 36.599271 138 36.499419 139 36.364338 140 36.246063 141 36.102067 142 36.004165 143 35.815304 144 35.718779 145 35.600731 146 35.505455 147 35.366433 148 35.251944 149 35.123582 150 34.962112 151 31.120231 152 30.628122 153 30.997061 154 34.827250 155 35.427958 156 35.953283 157 39.895221 158 40.137850 159 40.214366 160 40.254914 161 40.371150 162 40.258806 163 40.301585 164 40.266562 165 40.293911 166 40.241563 167 40.210005 168 40.192095 169 40.137902 170 40.173679 171 40.144104 172 40.083939 173 40.083986 174 40.055812 175 40.043075 176 39.971285 177 39.947460 178 39.990958 179 39.958930 180 39.924375 181 39.852344 182 39.809862 183 39.858845 184 39.755301 185 39.797727 186 39.746799 187 39.686355 188 39.630334 189 39.617858 190 39.662331 191 39.647154 192 39.565634 193 39.579599 194 39.468327 195 39.428163 196 39.391322 197 39.284441 198 39.288586 199 39.198776 200 39.217583 201 39.176698 202 39.149160 203 39.077797 204 39.059126 205 39.017776 206 38.939978 207 38.937630 208 38.922559 209 38.868537 210 38.844410 211 38.800418 212 38.768711 213 38.759508 214 38.742950 215 38.717403 216 38.641345 217 38.631514 218 38.591607 219 38.529567 220 38.474708 221 38.452607 222 38.385487 223 38.371235 224 38.340064 225 38.335873 226 38.264257 227 37.086856 228 37.709846 229 38.011506 230 38.124212 231 38.163623 232 38.175354 233 38.149111 234 38.115348 235 38.048229 236 37.975120 237 37.904510 238 37.837017 239 37.755441 240 37.688347 241 37.571845 242 37.474220 243 37.404424 244 37.307922 245 37.198189 246 37.121027 247 37.013924 248 36.983797 249 36.855219 250 36.734624 251 36.679984 252 36.500600 253 36.429082 254 36.356003 255 36.252279 256 36.092580 257 35.995105 258 35.871176 259 35.736125 260 35.603835 261 35.438697 262 35.306235 263 35.193595 264 35.038446 265 34.897596 266 34.757006 267 34.637935 268 34.467804 269 34.380004 270 34.221343 271 34.093250 272 33.989206 273 33.796976 274 33.614687 275 33.439487 276 33.304120 277 33.140885 278 33.003221 279 32.854397 280 32.636829 281 32.539465 282 32.393461 283 32.252769 284 32.139440 285 31.914474 286 31.745769 287 31.610479 288 31.448289 289 31.336543 290 31.206534 291 31.082373 292 30.900763 293 30.729410 294 30.595020 295 30.461753 296 30.335982 297 30.197528 298 30.044386 299 29.928626 300 29.768026 301 29.177654 302 25.316841