#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i HGDP/HGDP00944/HGDP00944.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP00944/QCmetrics/HGDP00944.WgsMetrics.chrY.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 23636355 20.507 26.319 16 3 0 0.076653 0.010403 0.041815 0.006786 0.32991 0.46557 0.99444 0.98286 0.91593 0.64898 0.28066 0.096636 0.052751 0.039078 0.034242 0.030635 0.027342 0.02405 0.020693 0.017722 0.98573 18 coverage high_quality_coverage_count 0 131476 1 55301 2 57494 3 70187 4 90787 5 129409 6 191673 7 281178 8 405611 9 573926 10 784664 11 1029333 12 1278680 13 1512090 14 1705042 15 1825885 16 1862706 17 1817075 18 1694492 19 1505456 20 1291258 21 1065678 22 847068 23 654689 24 491074 25 360630 26 260554 27 186853 28 133656 29 95581 30 70155 31 53170 32 41299 33 33474 34 28448 35 24404 36 20896 37 18770 38 16918 39 15643 40 14476 41 13560 42 12899 43 12007 44 11497 45 10736 46 10333 47 9970 48 9445 49 9388 50 9081 51 8821 52 8973 53 8689 54 8663 55 8531 56 8254 57 8302 58 8007 59 7946 60 7892 61 7836 62 7736 63 7894 64 7770 65 7615 66 7715 67 7721 68 7695 69 7951 70 7791 71 7724 72 7853 73 7587 74 7723 75 7701 76 7798 77 7820 78 7845 79 7974 80 7940 81 7973 82 8208 83 8081 84 8112 85 7757 86 7970 87 7773 88 7821 89 7703 90 7673 91 7690 92 7678 93 7455 94 7136 95 6989 96 6670 97 6469 98 6400 99 6082 100 5972 101 5720 102 5573 103 5354 104 5179 105 5072 106 4813 107 4727 108 4521 109 4384 110 4298 111 4046 112 3821 113 3722 114 3564 115 3316 116 3227 117 3258 118 2973 119 2870 120 2884 121 2918 122 2619 123 2620 124 2548 125 2692 126 2477 127 2320 128 2275 129 2179 130 2158 131 2025 132 1997 133 1957 134 1881 135 1790 136 1789 137 1683 138 1656 139 1560 140 1602 141 1577 142 1488 143 1388 144 1385 145 1402 146 1267 147 1275 148 1265 149 1205 150 1182 151 1139 152 1152 153 1079 154 1087 155 1145 156 1051 157 1120 158 1155 159 1048 160 1091 161 1087 162 1024 163 1044 164 990 165 1007 166 953 167 959 168 997 169 999 170 992 171 1016 172 1006 173 967 174 955 175 1032 176 959 177 990 178 939 179 933 180 918 181 868 182 958 183 949 184 882 185 892 186 900 187 806 188 867 189 870 190 889 191 822 192 867 193 821 194 789 195 798 196 783 197 751 198 845 199 762 200 734 201 739 202 729 203 755 204 781 205 748 206 773 207 721 208 745 209 812 210 784 211 789 212 751 213 763 214 724 215 720 216 742 217 700 218 746 219 701 220 683 221 681 222 700 223 704 224 679 225 668 226 679 227 740 228 692 229 696 230 718 231 643 232 708 233 729 234 741 235 667 236 678 237 649 238 655 239 678 240 680 241 635 242 671 243 618 244 670 245 638 246 664 247 634 248 599 249 620 250 191272