#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP00947/HGDP00947.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP00947/QCmetrics/HGDP00947.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 16.355 6.1347 16 3 0 0.06844 0.0037631 0.03893 0.0061498 0.000212 0.1175 0.99608 0.98543 0.91606 0.62986 0.24754 0.057388 0.013115 0.0036564 0.0018198 0.0010873 0.00072072 0.00050186 0.0003781 0.00029233 0.98768 19 coverage high_quality_coverage_count 0 595680 1 314892 2 340052 3 414101 4 552203 5 798580 6 1205035 7 1833585 8 2752920 9 3961860 10 5471695 11 7151892 12 8858135 13 10428537 14 11625029 15 12333272 16 12496335 17 12104629 18 11226759 19 9994321 20 8564489 21 7073358 22 5647676 23 4364165 24 3275573 25 2398940 26 1721180 27 1208074 28 835061 29 571359 30 391942 31 272818 32 194431 33 142793 34 109646 35 88188 36 73531 37 62694 38 54526 39 48193 40 42565 41 37987 42 34397 43 31054 44 28097 45 25175 46 22983 47 20962 48 18922 49 17232 50 15561 51 14046 52 13251 53 12250 54 11297 55 10556 56 9799 57 9039 58 8160 59 7466 60 7036 61 6415 62 5908 63 5944 64 5714 65 5424 66 5286 67 4986 68 4650 69 4398 70 4142 71 4033 72 3680 73 3705 74 3394 75 3206 76 3046 77 2888 78 2709 79 2489 80 2359 81 2241 82 2187 83 1928 84 1844 85 1800 86 1698 87 1608 88 1584 89 1577 90 1535 91 1487 92 1402 93 1383 94 1275 95 1258 96 1219 97 1237 98 1104 99 1147 100 1064 101 1070 102 987 103 999 104 952 105 931 106 886 107 972 108 890 109 845 110 854 111 826 112 744 113 781 114 803 115 743 116 730 117 682 118 636 119 663 120 619 121 553 122 574 123 575 124 521 125 529 126 494 127 488 128 485 129 469 130 435 131 441 132 456 133 405 134 423 135 389 136 378 137 388 138 349 139 375 140 360 141 340 142 372 143 307 144 311 145 290 146 318 147 298 148 254 149 259 150 232 151 237 152 224 153 245 154 220 155 231 156 160 157 149 158 158 159 164 160 176 161 150 162 162 163 155 164 138 165 148 166 138 167 125 168 133 169 116 170 122 171 130 172 99 173 104 174 113 175 115 176 110 177 114 178 108 179 118 180 124 181 120 182 113 183 112 184 115 185 102 186 101 187 106 188 92 189 98 190 118 191 106 192 104 193 101 194 114 195 85 196 94 197 94 198 95 199 104 200 103 201 90 202 101 203 84 204 79 205 73 206 89 207 75 208 81 209 54 210 72 211 66 212 65 213 63 214 66 215 66 216 96 217 83 218 71 219 83 220 93 221 81 222 79 223 56 224 80 225 66 226 62 227 72 228 66 229 54 230 61 231 68 232 61 233 65 234 60 235 61 236 72 237 64 238 47 239 58 240 78 241 66 242 76 243 77 244 74 245 79 246 75 247 72 248 66 249 65 250 4648