#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.autosome-PAR.interval_list -i HGDP/HGDP00948/HGDP00948.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP00948/QCmetrics/HGDP00948.WgsMetrics.autosome.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 2747965384 33.182 12.196 33 5 0 0.07303 0.0034916 0.04009 0.0055231 0.01617 0.1383 0.99707 0.99324 0.98768 0.97541 0.94202 0.85212 0.66702 0.20041 0.026638 0.0084266 0.0059542 0.0046038 0.0037028 0.0030669 0.99525 23 coverage high_quality_coverage_count 0 8054518 1 3113349 2 2560333 3 2429942 4 2430179 5 2510925 6 2671580 7 2940725 8 3320915 9 3831689 10 4507078 11 5373863 12 6469999 13 7830158 14 9522232 15 11648719 16 14290007 17 17555749 18 21632019 19 26633746 20 32679413 21 39892344 22 48288419 23 57840038 24 68349089 25 79557855 26 91044242 27 102389106 28 113071897 29 122581094 30 130449324 31 136267878 32 139720690 33 140655453 34 139002656 35 134937258 36 128688090 37 120638624 38 111166365 39 100702512 40 89753218 41 78676497 42 67907827 43 57730218 44 48319777 45 39872164 46 32437357 47 26024802 48 20627962 49 16166256 50 12528821 51 9635152 52 7368616 53 5615825 54 4277950 55 3274622 56 2522477 57 1972151 58 1569656 59 1278017 60 1065930 61 911909 62 796601 63 713103 64 649679 65 598700 66 559909 67 527265 68 498227 69 472664 70 450684 71 431307 72 410860 73 391645 74 373890 75 358386 76 342598 77 330176 78 316691 79 304503 80 291757 81 280713 82 269641 83 259506 84 250755 85 241971 86 232703 87 224621 88 216175 89 208323 90 200961 91 194340 92 187826 93 181996 94 176585 95 170674 96 166372 97 161482 98 155851 99 151124 100 147434 101 142175 102 138749 103 134064 104 130756 105 127404 106 122636 107 119024 108 115511 109 111746 110 108011 111 104856 112 101634 113 98036 114 95816 115 92591 116 90565 117 88101 118 86279 119 83642 120 81861 121 79200 122 77845 123 75306 124 73736 125 71792 126 69925 127 68391 128 66224 129 65213 130 64094 131 62579 132 61116 133 59729 134 59135 135 57654 136 56572 137 55020 138 54820 139 53490 140 52820 141 51462 142 50195 143 49549 144 48684 145 47915 146 46834 147 45849 148 45137 149 44559 150 43274 151 42703 152 42209 153 41114 154 40515 155 39985 156 38990 157 38445 158 37896 159 36961 160 36599 161 35996 162 35357 163 34872 164 34455 165 33851 166 33539 167 33330 168 32444 169 32186 170 31598 171 31218 172 30450 173 30156 174 29183 175 29488 176 28761 177 28339 178 27569 179 26918 180 26374 181 26609 182 25854 183 25360 184 24998 185 24699 186 24291 187 23809 188 23856 189 23213 190 22921 191 22437 192 22136 193 21864 194 21529 195 21056 196 20974 197 20929 198 20299 199 20117 200 19806 201 19415 202 19278 203 18938 204 18645 205 18415 206 18263 207 18017 208 17830 209 17750 210 17391 211 17243 212 17267 213 16926 214 16742 215 16842 216 16702 217 16196 218 16010 219 15864 220 15638 221 15377 222 15193 223 15032 224 14740 225 14783 226 14658 227 14557 228 14213 229 14196 230 13997 231 13561 232 13621 233 13830 234 13491 235 13320 236 13183 237 13066 238 13090 239 13026 240 12751 241 12714 242 12398 243 12291 244 12325 245 12107 246 11949 247 11828 248 12036 249 11559 250 2132312