#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.autosome-PAR.interval_list -i HGDP/HGDP00965/HGDP00965.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP00965/QCmetrics/HGDP00965.WgsMetrics.autosome.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 2747965384 30.407 10.95 30 4 0 0.19477 0.0016557 0.03584 0.0031015 0.015619 0.25099 0.99863 0.99585 0.99239 0.98523 0.95122 0.81012 0.52161 0.073197 0.011135 0.0069259 0.0051939 0.0041004 0.0033504 0.002801 0.99745 26 coverage high_quality_coverage_count 0 3766564 1 2258022 2 1885367 3 1757758 4 1729691 5 1724703 6 1766246 7 1849123 8 1981878 9 2190511 10 2500264 11 2936206 12 3592513 13 4571983 14 6071392 15 8361893 16 11777810 17 16731242 18 23671003 19 32931484 20 44817039 21 59259126 22 75980186 23 94311921 24 113368801 25 131904814 26 148780685 27 162575979 28 172318524 29 177237435 30 177277401 31 172421062 32 163248735 33 150587441 34 135469234 35 118950489 36 102017521 37 85578443 38 70229586 39 56432825 40 44468606 41 34416338 42 26185067 43 19636485 44 14532831 45 10653877 46 7772671 47 5662390 48 4146799 49 3069896 50 2323676 51 1802861 52 1446736 53 1196853 54 1026410 55 902239 56 807314 57 738278 58 682888 59 638235 60 597077 61 564066 62 534575 63 504709 64 479762 65 456892 66 435855 67 414221 68 394924 69 377260 70 361072 71 345088 72 330808 73 316741 74 303746 75 290985 76 278831 77 268939 78 259167 79 249440 80 239447 81 231079 82 223263 83 215238 84 208402 85 200527 86 194194 87 188563 88 182347 89 178024 90 172070 91 167098 92 162518 93 158667 94 152536 95 148828 96 143226 97 139196 98 134804 99 130876 100 127405 101 123090 102 119329 103 116503 104 113352 105 109132 106 106490 107 102649 108 99730 109 96609 110 93753 111 90758 112 87998 113 85759 114 83240 115 80857 116 78628 117 77481 118 75124 119 73322 120 71417 121 70241 122 68660 123 66886 124 65587 125 63915 126 62308 127 61138 128 59851 129 58266 130 57185 131 56112 132 54769 133 53919 134 52866 135 51915 136 50411 137 49646 138 48549 139 47941 140 47268 141 46119 142 45145 143 44554 144 43802 145 43379 146 42439 147 41642 148 40946 149 40240 150 39403 151 39171 152 38400 153 37835 154 36904 155 36344 156 35936 157 34839 158 34451 159 33753 160 33425 161 32732 162 32187 163 31736 164 31659 165 30813 166 30655 167 30206 168 29521 169 29419 170 28941 171 28387 172 27889 173 27782 174 27032 175 26725 176 26436 177 26194 178 25791 179 25421 180 24990 181 24380 182 24315 183 23820 184 23625 185 23382 186 22515 187 22485 188 22191 189 21772 190 21395 191 21174 192 20745 193 20261 194 20149 195 20088 196 19720 197 19489 198 19209 199 18894 200 18486 201 18392 202 18268 203 18020 204 17855 205 17522 206 17215 207 17070 208 17098 209 16527 210 16330 211 16376 212 15968 213 16101 214 16014 215 15585 216 15563 217 15559 218 15093 219 14925 220 14884 221 14672 222 14374 223 14289 224 13951 225 13926 226 13476 227 13420 228 13502 229 13155 230 13094 231 12881 232 12827 233 12755 234 12504 235 12455 236 12191 237 11912 238 12013 239 11780 240 11547 241 11665 242 11386 243 11366 244 11259 245 11093 246 10981 247 10772 248 10616 249 10689 250 2054660