#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP00965/HGDP00965.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP00965/QCmetrics/HGDP00965.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 14.95 4.8846 15 3 0 0.19749 0.0016871 0.03422 0.0016721 6.012e-05 0.23513 0.99831 0.99224 0.90542 0.51749 0.13646 0.022019 0.0062312 0.0020293 0.00087219 0.0004533 0.00027552 0.00018342 0.0001258 8.9952e-05 0.99062 20 coverage high_quality_coverage_count 0 256933 1 168627 2 172110 3 224448 4 357808 5 648422 6 1212129 7 2172169 8 3625592 9 5547987 10 7847233 11 10228175 12 12359990 13 13910481 14 14665241 15 14493648 16 13515655 17 11945387 18 10012681 19 7991855 20 6109761 21 4494603 22 3175415 23 2175406 24 1453181 25 947532 26 612040 27 397484 28 263350 29 181149 30 131440 31 101360 32 81090 33 67865 34 57866 35 50302 36 44466 37 39114 38 34680 39 30976 40 27761 41 24604 42 22168 43 19719 44 17536 45 15576 46 13990 47 12622 48 11423 49 10618 50 9777 51 8813 52 7824 53 6818 54 6214 55 5783 56 5196 57 4853 58 4427 59 4014 60 3663 61 3471 62 3159 63 2959 64 2659 65 2547 66 2351 67 2168 68 2062 69 2004 70 1918 71 1837 72 1602 73 1571 74 1363 75 1263 76 1194 77 1160 78 1066 79 1036 80 1024 81 998 82 884 83 841 84 931 85 877 86 927 87 791 88 740 89 752 90 691 91 609 92 545 93 580 94 539 95 545 96 539 97 469 98 455 99 481 100 424 101 399 102 398 103 346 104 353 105 372 106 385 107 347 108 351 109 337 110 320 111 278 112 285 113 280 114 238 115 212 116 222 117 217 118 177 119 185 120 189 121 157 122 160 123 152 124 152 125 160 126 146 127 134 128 114 129 139 130 131 131 129 132 109 133 126 134 133 135 113 136 120 137 108 138 131 139 96 140 96 141 80 142 75 143 68 144 91 145 84 146 74 147 69 148 72 149 74 150 59 151 78 152 68 153 80 154 73 155 80 156 80 157 65 158 58 159 57 160 47 161 71 162 62 163 62 164 57 165 56 166 48 167 62 168 58 169 59 170 57 171 50 172 43 173 41 174 54 175 56 176 35 177 43 178 36 179 37 180 29 181 21 182 19 183 21 184 31 185 24 186 26 187 17 188 13 189 11 190 16 191 14 192 20 193 15 194 23 195 16 196 15 197 17 198 18 199 21 200 15 201 17 202 9 203 10 204 16 205 17 206 17 207 9 208 9 209 12 210 15 211 13 212 15 213 10 214 11 215 9 216 12 217 12 218 9 219 9 220 9 221 9 222 8 223 9 224 5 225 14 226 11 227 14 228 18 229 14 230 12 231 7 232 3 233 2 234 5 235 11 236 7 237 7 238 7 239 7 240 4 241 4 242 9 243 6 244 10 245 7 246 8 247 6 248 6 249 9 250 1462