#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP00967/HGDP00967.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP00967/QCmetrics/HGDP00967.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	28.166	7.985	28	4	0	0.24677	0.0019586	0.030617	0.0020795	0.00038538	0.28181	0.99915	0.99725	0.994	0.98436	0.92631	0.71733	0.38687	0.037058	0.0070444	0.0039346	0.0025233	0.0017698	0.001317	0.0010296	0.99828	28	

coverage	high_quality_coverage_count	
0	129901
1	77909
2	69273
3	68878
4	72527
5	78496
6	84347
7	94802
8	109451
9	126898
10	152371
11	191497
12	254293
13	355481
14	512849
15	756310
16	1109295
17	1605482
18	2259488
19	3099643
20	4086742
21	5199756
22	6378816
23	7536330
24	8588044
25	9455780
26	10058249
27	10365581
28	10358209
29	10029463
30	9435463
31	8619952
32	7664682
33	6635485
34	5608933
35	4618470
36	3716318
37	2932098
38	2263850
39	1715938
40	1281214
41	941777
42	686929
43	495901
44	360099
45	260538
46	192899
47	144558
48	111773
49	89750
50	74233
51	64381
52	56821
53	50208
54	45910
55	42246
56	38518
57	35930
58	33833
59	30963
60	28727
61	26818
62	25126
63	23430
64	21629
65	20276
66	19011
67	17631
68	16588
69	15439
70	14471
71	13718
72	13020
73	12404
74	11625
75	10825
76	10439
77	9757
78	9428
79	8929
80	8503
81	7904
82	7733
83	7573
84	6947
85	6686
86	6356
87	6051
88	5650
89	5476
90	5157
91	5050
92	4780
93	4694
94	4456
95	4197
96	3966
97	3888
98	3874
99	3663
100	3666
101	3394
102	3307
103	3150
104	3019
105	2883
106	2773
107	2610
108	2661
109	2672
110	2587
111	2507
112	2532
113	2415
114	2410
115	2304
116	2396
117	2237
118	2217
119	2214
120	2130
121	2101
122	1983
123	1974
124	2026
125	1893
126	1792
127	1737
128	1756
129	1656
130	1663
131	1628
132	1461
133	1478
134	1406
135	1372
136	1352
137	1308
138	1336
139	1275
140	1291
141	1208
142	1176
143	1201
144	1150
145	1172
146	1093
147	1103
148	1101
149	1094
150	1126
151	1080
152	1006
153	1042
154	1054
155	940
156	853
157	916
158	852
159	787
160	749
161	744
162	724
163	753
164	649
165	658
166	602
167	555
168	539
169	605
170	542
171	510
172	477
173	477
174	490
175	497
176	456
177	477
178	441
179	475
180	422
181	438
182	439
183	457
184	460
185	419
186	450
187	424
188	414
189	444
190	416
191	389
192	365
193	355
194	363
195	374
196	354
197	352
198	327
199	315
200	309
201	267
202	296
203	296
204	257
205	275
206	262
207	281
208	227
209	273
210	271
211	260
212	251
213	246
214	258
215	268
216	250
217	204
218	199
219	211
220	199
221	210
222	207
223	213
224	213
225	197
226	207
227	205
228	217
229	202
230	178
231	188
232	190
233	175
234	164
235	167
236	186
237	198
238	154
239	179
240	149
241	162
242	153
243	159
244	174
245	171
246	146
247	152
248	144
249	168
250	18104