#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i HGDP/HGDP00967/HGDP00967.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP00967/QCmetrics/HGDP00967.WgsMetrics.chrY.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
23636355	2.2509	16.808	0	0	0	0.092799	0.0066665	0.082566	0.032159	0.36478	0.57897	0.21759	0.044533	0.028667	0.022548	0.019087	0.0166	0.014724	0.012129	0.01042	0.00925	0.0083727	0.0076632	0.0070652	0.0065104	0.12545	1	

coverage	high_quality_coverage_count	
0	18493361
1	3103534
2	579607
3	247675
4	159584
5	117482
6	89055
7	68460
8	54961
9	45055
10	37914
11	32415
12	28087
13	24615
14	21592
15	19233
16	17969
17	15912
18	14845
19	13852
20	12933
21	12119
22	11594
23	11342
24	10798
25	9851
26	9291
27	8876
28	8374
29	7953
30	7709
31	7350
32	7022
33	6604
34	6119
35	5866
36	5449
37	5326
38	5120
39	4765
40	4582
41	4467
42	4436
43	4324
44	4125
45	3910
46	3697
47	3665
48	3671
49	3508
50	3227
51	3102
52	2981
53	2874
54	2758
55	2675
56	2630
57	2615
58	2390
59	2413
60	2305
61	2190
62	2198
63	2064
64	2065
65	2025
66	1930
67	2031
68	1971
69	1956
70	1874
71	1773
72	1784
73	1699
74	1760
75	1615
76	1653
77	1608
78	1500
79	1506
80	1455
81	1451
82	1454
83	1445
84	1415
85	1361
86	1375
87	1391
88	1399
89	1387
90	1448
91	1375
92	1380
93	1392
94	1343
95	1323
96	1202
97	1217
98	1220
99	1214
100	1253
101	1248
102	1258
103	1314
104	1202
105	1344
106	1341
107	1338
108	1257
109	1267
110	1244
111	1316
112	1288
113	1195
114	1276
115	1193
116	1203
117	1132
118	1140
119	1108
120	1121
121	1096
122	1161
123	1064
124	1042
125	1073
126	1029
127	968
128	968
129	939
130	966
131	962
132	954
133	960
134	968
135	916
136	946
137	942
138	900
139	870
140	889
141	931
142	902
143	803
144	875
145	835
146	850
147	776
148	880
149	790
150	738
151	810
152	757
153	743
154	778
155	785
156	774
157	789
158	753
159	705
160	752
161	749
162	714
163	678
164	694
165	658
166	632
167	625
168	598
169	591
170	609
171	547
172	561
173	531
174	544
175	530
176	478
177	485
178	483
179	458
180	406
181	411
182	406
183	400
184	422
185	404
186	422
187	400
188	389
189	371
190	379
191	374
192	325
193	357
194	350
195	306
196	339
197	316
198	290
199	297
200	302
201	298
202	293
203	313
204	290
205	289
206	259
207	274
208	269
209	267
210	284
211	286
212	284
213	264
214	271
215	270
216	267
217	280
218	246
219	283
220	286
221	270
222	239
223	262
224	266
225	246
226	286
227	263
228	258
229	241
230	240
231	264
232	220
233	222
234	226
235	238
236	232
237	223
238	230
239	225
240	246
241	200
242	239
243	239
244	212
245	209
246	204
247	211
248	200
249	206
250	60984