#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP00972/HGDP00972.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP00972/QCmetrics/HGDP00972.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	28.717	7.4912	29	4	0	0.19582	0.0012304	0.028153	0.0022817	0.00016778	0.22765	0.99915	0.99678	0.99295	0.98399	0.93677	0.75472	0.43293	0.042662	0.0056504	0.003028	0.001925	0.001322	0.00094298	0.00068709	0.9981	27	

coverage	high_quality_coverage_count	
0	129027
1	93908
2	85579
3	88031
4	92569
5	98056
6	104456
7	112445
8	125289
9	142816
10	162923
11	196190
12	243954
13	320240
14	440405
15	627546
16	901475
17	1291573
18	1831837
19	2529841
20	3396138
21	4393273
22	5500473
23	6642143
24	7760616
25	8755949
26	9555126
27	10086345
28	10321965
29	10229077
30	9847441
31	9205402
32	8373378
33	7406768
34	6380237
35	5356801
36	4393295
37	3518772
38	2761512
39	2122033
40	1598852
41	1182645
42	861496
43	621913
44	445089
45	316993
46	227205
47	164274
48	120582
49	90879
50	71095
51	57260
52	48235
53	42085
54	37681
55	33705
56	30734
57	28335
58	26036
59	23745
60	22248
61	20507
62	19033
63	17918
64	16701
65	16009
66	14961
67	14171
68	13604
69	12619
70	12262
71	11232
72	10603
73	9802
74	9271
75	8640
76	8034
77	7761
78	7113
79	7017
80	6739
81	6678
82	6246
83	6207
84	5973
85	5706
86	5362
87	5150
88	4882
89	4708
90	4589
91	4460
92	4295
93	4155
94	3922
95	3884
96	3611
97	3461
98	3356
99	3192
100	3088
101	3001
102	3084
103	2875
104	2667
105	2513
106	2482
107	2448
108	2238
109	2183
110	2039
111	1990
112	1830
113	1738
114	1709
115	1533
116	1607
117	1450
118	1358
119	1411
120	1325
121	1202
122	1178
123	1107
124	1135
125	1123
126	988
127	1073
128	921
129	967
130	919
131	933
132	872
133	860
134	876
135	845
136	860
137	783
138	785
139	814
140	742
141	771
142	759
143	698
144	706
145	661
146	595
147	642
148	611
149	622
150	610
151	548
152	588
153	545
154	558
155	529
156	535
157	488
158	550
159	549
160	454
161	517
162	515
163	500
164	452
165	463
166	490
167	440
168	451
169	410
170	464
171	393
172	405
173	428
174	404
175	386
176	356
177	342
178	347
179	332
180	330
181	328
182	300
183	330
184	306
185	285
186	279
187	271
188	292
189	277
190	276
191	264
192	309
193	242
194	290
195	267
196	248
197	252
198	278
199	234
200	234
201	266
202	245
203	247
204	209
205	241
206	239
207	239
208	229
209	210
210	236
211	186
212	177
213	149
214	179
215	156
216	155
217	147
218	162
219	149
220	153
221	172
222	165
223	127
224	137
225	154
226	142
227	135
228	145
229	122
230	154
231	124
232	121
233	160
234	125
235	125
236	114
237	99
238	108
239	99
240	99
241	88
242	106
243	130
244	112
245	87
246	94
247	115
248	98
249	92
250	7435