#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP00974/HGDP00974.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP00974/QCmetrics/HGDP00974.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	31.46	8.3	31	4	0	0.21741	0.0015004	0.03052	0.0024313	0.00035831	0.25222	0.99921	0.99729	0.99398	0.98687	0.96023	0.85391	0.60664	0.11	0.011196	0.0040848	0.0024195	0.0016284	0.0011721	0.00089267	0.99836	28	

coverage	high_quality_coverage_count	
0	119577
1	77066
2	69425
3	70838
4	74720
5	81660
6	88371
7	98043
8	110320
9	125754
10	144082
11	167768
12	202693
13	250988
14	316194
15	411217
16	547080
17	738899
18	997752
19	1357604
20	1820437
21	2407494
22	3124718
23	3953565
24	4866013
25	5816706
26	6763992
27	7649211
28	8402873
29	8980918
30	9342090
31	9452314
32	9324220
33	8964808
34	8405630
35	7688001
36	6882867
37	6018292
38	5150250
39	4317605
40	3549458
41	2870600
42	2275663
43	1775897
44	1367506
45	1042719
46	788892
47	589855
48	439193
49	329473
50	247732
51	189643
52	145820
53	115886
54	94191
55	77324
56	65054
57	55604
58	48195
59	42220
60	37511
61	33621
62	30909
63	27885
64	25408
65	22987
66	20740
67	19407
68	18183
69	16663
70	15727
71	14622
72	13714
73	13138
74	12122
75	11421
76	10715
77	10394
78	9550
79	8937
80	8749
81	8260
82	7894
83	7466
84	7044
85	6779
86	6431
87	5889
88	5634
89	5266
90	5165
91	4988
92	4732
93	4533
94	4284
95	4099
96	3899
97	3820
98	3590
99	3397
100	3241
101	3048
102	2984
103	2880
104	2811
105	2682
106	2566
107	2611
108	2529
109	2471
110	2356
111	2249
112	2134
113	2060
114	1878
115	1875
116	1817
117	1804
118	1723
119	1652
120	1635
121	1633
122	1593
123	1527
124	1531
125	1505
126	1411
127	1427
128	1392
129	1371
130	1289
131	1333
132	1192
133	1163
134	1157
135	1222
136	1254
137	1128
138	1208
139	1145
140	1145
141	1145
142	1012
143	1048
144	971
145	928
146	883
147	957
148	913
149	915
150	907
151	959
152	881
153	895
154	896
155	820
156	777
157	769
158	760
159	708
160	637
161	650
162	655
163	570
164	574
165	594
166	540
167	536
168	506
169	567
170	537
171	527
172	481
173	476
174	501
175	430
176	423
177	424
178	420
179	453
180	382
181	387
182	366
183	390
184	355
185	371
186	343
187	363
188	306
189	364
190	313
191	367
192	368
193	327
194	355
195	301
196	332
197	263
198	319
199	311
200	305
201	269
202	278
203	305
204	275
205	293
206	254
207	275
208	286
209	288
210	271
211	247
212	274
213	270
214	225
215	235
216	240
217	252
218	229
219	265
220	241
221	252
222	194
223	230
224	207
225	194
226	209
227	172
228	177
229	203
230	173
231	197
232	181
233	187
234	168
235	160
236	183
237	180
238	140
239	175
240	157
241	154
242	153
243	163
244	144
245	168
246	172
247	136
248	173
249	157
250	14892