#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP01021/HGDP01021.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP01021/QCmetrics/HGDP01021.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	29.581	7.7425	29	4	0	0.19762	0.0012752	0.029623	0.0030415	0.00015776	0.23171	0.99919	0.99718	0.99383	0.98635	0.94902	0.79395	0.48823	0.05731	0.0071435	0.0035045	0.0021636	0.0014762	0.0010722	0.00080604	0.99828	28	

coverage	high_quality_coverage_count	
0	123892
1	78678
2	72523
3	74926
4	78926
5	86058
6	91523
7	99958
8	109822
9	121596
10	141091
11	167369
12	206581
13	266310
14	356602
15	497249
16	708136
17	1016681
18	1444577
19	2012856
20	2737922
21	3624489
22	4633284
23	5731341
24	6861033
25	7920782
26	8852341
27	9568406
28	10004665
29	10158349
30	10031965
31	9611438
32	8949242
33	8121368
34	7159790
35	6157585
36	5173884
37	4251399
38	3409369
39	2682619
40	2065483
41	1562839
42	1165924
43	860877
44	629380
45	456550
46	332282
47	242732
48	179441
49	135572
50	105242
51	84706
52	70281
53	58896
54	51333
55	44654
56	39976
57	35869
58	32642
59	29951
60	27483
61	25708
62	23994
63	22244
64	21033
65	19196
66	17940
67	16698
68	15375
69	14300
70	13286
71	12518
72	11836
73	11392
74	10673
75	10250
76	9458
77	8806
78	8306
79	8044
80	7471
81	7230
82	6758
83	6290
84	6248
85	5832
86	5815
87	5482
88	5298
89	5019
90	4834
91	4644
92	4459
93	4311
94	4203
95	3856
96	3735
97	3653
98	3549
99	3248
100	3125
101	2958
102	2875
103	2701
104	2622
105	2557
106	2467
107	2413
108	2353
109	2345
110	2220
111	2097
112	2044
113	2090
114	2013
115	1903
116	1790
117	1756
118	1703
119	1638
120	1588
121	1493
122	1362
123	1335
124	1309
125	1291
126	1271
127	1225
128	1163
129	1184
130	1181
131	1153
132	1107
133	1027
134	1038
135	1007
136	946
137	962
138	967
139	913
140	944
141	941
142	932
143	870
144	875
145	907
146	938
147	904
148	792
149	775
150	793
151	794
152	780
153	765
154	751
155	724
156	638
157	674
158	615
159	667
160	596
161	605
162	649
163	576
164	612
165	552
166	504
167	533
168	538
169	553
170	519
171	528
172	483
173	486
174	488
175	454
176	443
177	383
178	416
179	376
180	362
181	363
182	364
183	384
184	385
185	351
186	420
187	394
188	393
189	377
190	419
191	446
192	393
193	447
194	357
195	401
196	386
197	365
198	404
199	367
200	349
201	348
202	396
203	370
204	367
205	390
206	364
207	346
208	313
209	328
210	284
211	277
212	265
213	306
214	283
215	263
216	267
217	230
218	270
219	241
220	197
221	195
222	188
223	184
224	173
225	155
226	166
227	170
228	163
229	153
230	168
231	139
232	164
233	161
234	154
235	146
236	141
237	148
238	120
239	103
240	103
241	125
242	99
243	126
244	112
245	120
246	107
247	97
248	99
249	105
250	8730