#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP01043/HGDP01043.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP01043/QCmetrics/HGDP01043.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 13.673 5.2594 13 3 0 0.037866 0.00087113 0.057992 0.0060918 0.00014421 0.10297 0.9958 0.97893 0.826 0.4023 0.093927 0.016402 0.0057528 0.0021431 0.0010222 0.00059281 0.00039637 0.00028274 0.00020533 0.00015171 0.98048 17 coverage high_quality_coverage_count 0 639010 1 373009 2 462628 3 673672 4 1057477 5 1722662 6 2776626 7 4271538 8 6175780 9 8315162 10 10483643 11 12341299 12 13629810 13 14145437 14 13850597 15 12825898 16 11280523 17 9445490 18 7557590 19 5798898 20 4279131 21 3048505 22 2106688 23 1418742 24 939490 25 617962 26 405861 27 271682 28 188487 29 135961 30 103241 31 82219 32 68614 33 58457 34 51539 35 45810 36 40458 37 36353 38 33042 39 29357 40 26128 41 23319 42 21112 43 18873 44 17181 45 15450 46 13948 47 12547 48 11418 49 10519 50 9497 51 8686 52 7880 53 7281 54 6508 55 6041 56 5547 57 5071 58 4576 59 4236 60 3907 61 3568 62 3272 63 3159 64 3097 65 2898 66 2825 67 2628 68 2365 69 2162 70 2084 71 1941 72 1905 73 1701 74 1728 75 1608 76 1694 77 1580 78 1521 79 1523 80 1456 81 1435 82 1280 83 1276 84 1155 85 1036 86 1078 87 1074 88 1011 89 974 90 963 91 975 92 954 93 857 94 879 95 754 96 711 97 763 98 671 99 629 100 618 101 565 102 622 103 563 104 546 105 509 106 512 107 446 108 441 109 456 110 434 111 416 112 407 113 398 114 399 115 356 116 363 117 330 118 318 119 302 120 317 121 293 122 301 123 241 124 271 125 271 126 236 127 252 128 254 129 257 130 239 131 214 132 243 133 224 134 185 135 206 136 212 137 202 138 161 139 187 140 187 141 197 142 177 143 169 144 162 145 161 146 180 147 154 148 146 149 130 150 144 151 147 152 108 153 123 154 114 155 95 156 114 157 108 158 100 159 96 160 86 161 101 162 90 163 91 164 80 165 81 166 93 167 79 168 65 169 58 170 67 171 70 172 76 173 73 174 75 175 64 176 72 177 61 178 68 179 63 180 64 181 55 182 68 183 61 184 48 185 56 186 55 187 43 188 58 189 49 190 66 191 52 192 56 193 50 194 51 195 46 196 42 197 33 198 41 199 59 200 42 201 36 202 39 203 42 204 46 205 24 206 41 207 49 208 30 209 37 210 24 211 21 212 34 213 36 214 26 215 36 216 45 217 33 218 33 219 23 220 33 221 36 222 49 223 35 224 18 225 33 226 39 227 32 228 39 229 40 230 34 231 39 232 41 233 46 234 39 235 39 236 47 237 43 238 44 239 47 240 49 241 60 242 54 243 53 244 66 245 55 246 47 247 39 248 35 249 28 250 1977