#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP01063/HGDP01063.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP01063/QCmetrics/HGDP01063.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	17.155	6.4787	17	3	0	0.092156	0.0020809	0.045695	0.0022313	0.00013259	0.1423	0.99849	0.99384	0.95215	0.69076	0.27362	0.061575	0.016409	0.0068683	0.0039639	0.0024125	0.0015296	0.0010195	0.00070554	0.00050258	0.99384	22	

coverage	high_quality_coverage_count	
0	230064
1	157690
2	150578
3	174179
4	224393
5	335711
6	568412
7	990986
8	1694271
9	2752483
10	4192862
11	5982899
12	7967275
13	9948186
14	11670350
15	12899449
16	13461054
17	13310736
18	12523976
19	11257611
20	9646999
21	7945914
22	6299718
23	4811226
24	3550831
25	2540633
26	1768762
27	1205638
28	811867
29	543614
30	370595
31	255794
32	185400
33	141379
34	112669
35	95843
36	83125
37	74738
38	68316
39	63342
40	58905
41	54886
42	51149
43	47691
44	45149
45	41681
46	39202
47	36580
48	34482
49	32089
50	30193
51	28382
52	26823
53	25036
54	23672
55	22431
56	21462
57	20344
58	19360
59	18281
60	17130
61	16182
62	15208
63	14384
64	13601
65	12811
66	12167
67	11612
68	10913
69	10294
70	10130
71	9357
72	8791
73	8561
74	7768
75	7333
76	7036
77	6545
78	6287
79	5791
80	5693
81	5461
82	5232
83	5274
84	4809
85	4723
86	4423
87	4240
88	4032
89	3864
90	3761
91	3668
92	3415
93	3271
94	3088
95	3105
96	2838
97	2698
98	2575
99	2455
100	2319
101	2231
102	2092
103	1990
104	1948
105	1869
106	1817
107	1756
108	1578
109	1561
110	1515
111	1403
112	1401
113	1351
114	1242
115	1173
116	1146
117	1104
118	953
119	966
120	940
121	886
122	878
123	952
124	938
125	908
126	896
127	777
128	789
129	801
130	696
131	740
132	723
133	653
134	630
135	638
136	618
137	595
138	600
139	547
140	606
141	584
142	545
143	578
144	530
145	506
146	486
147	486
148	534
149	440
150	504
151	444
152	423
153	400
154	418
155	428
156	397
157	402
158	369
159	403
160	369
161	400
162	357
163	368
164	406
165	389
166	361
167	341
168	355
169	335
170	319
171	325
172	302
173	303
174	304
175	272
176	276
177	275
178	260
179	227
180	247
181	233
182	224
183	239
184	231
185	223
186	204
187	190
188	181
189	192
190	190
191	202
192	190
193	205
194	193
195	190
196	184
197	202
198	196
199	217
200	188
201	168
202	190
203	153
204	188
205	149
206	156
207	167
208	150
209	150
210	161
211	158
212	159
213	135
214	123
215	112
216	140
217	128
218	120
219	137
220	110
221	116
222	113
223	128
224	108
225	94
226	95
227	101
228	109
229	99
230	98
231	78
232	91
233	78
234	83
235	77
236	60
237	66
238	67
239	66
240	77
241	64
242	66
243	77
244	69
245	53
246	70
247	56
248	74
249	60
250	4134