#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP01065/HGDP01065.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP01065/QCmetrics/HGDP01065.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	33.136	8.1999	33	4	0	0.077264	0.0014996	0.042868	0.0019667	0.00030403	0.1239	0.99917	0.99708	0.99382	0.98815	0.97156	0.902	0.70615	0.16697	0.013159	0.0034165	0.0021325	0.0014681	0.0010718	0.00082208	0.99825	28	

coverage	high_quality_coverage_count	
0	126472
1	81172
2	77365
3	77606
4	81321
5	86183
6	90609
7	98689
8	105195
9	116034
10	128303
11	145369
12	165438
13	193400
14	230004
15	280420
16	352260
17	456899
18	610211
19	823326
20	1114663
21	1503840
22	2002006
23	2616682
24	3343355
25	4165400
26	5058345
27	5981314
28	6880880
29	7706612
30	8391925
31	8902700
32	9198455
33	9272618
34	9126855
35	8759537
36	8209989
37	7521260
38	6734403
39	5898639
40	5061864
41	4258432
42	3507456
43	2839222
44	2256444
45	1761087
46	1355619
47	1026335
48	765636
49	564858
50	412646
51	299884
52	218350
53	158863
54	115679
55	85582
56	65221
57	50542
58	41060
59	34101
60	28971
61	25642
62	23133
63	20902
64	19258
65	17759
66	16349
67	15272
68	14301
69	13734
70	13055
71	12052
72	11509
73	10801
74	10012
75	9526
76	9064
77	8707
78	8357
79	7978
80	7567
81	7044
82	6862
83	6425
84	6125
85	5765
86	5401
87	5271
88	5028
89	4801
90	4548
91	4418
92	4096
93	3964
94	3792
95	3601
96	3572
97	3427
98	3339
99	3228
100	3019
101	2970
102	2738
103	2704
104	2587
105	2439
106	2370
107	2157
108	2218
109	2189
110	2106
111	2001
112	1997
113	2023
114	1858
115	1850
116	1812
117	1750
118	1773
119	1601
120	1554
121	1535
122	1517
123	1422
124	1382
125	1406
126	1346
127	1284
128	1339
129	1329
130	1291
131	1250
132	1240
133	1282
134	1226
135	1176
136	1152
137	1107
138	1183
139	1080
140	1083
141	1071
142	1008
143	976
144	910
145	915
146	871
147	803
148	822
149	781
150	728
151	735
152	771
153	743
154	712
155	727
156	708
157	740
158	691
159	691
160	671
161	651
162	669
163	608
164	580
165	556
166	579
167	549
168	506
169	518
170	503
171	474
172	471
173	490
174	464
175	489
176	440
177	442
178	431
179	449
180	443
181	418
182	379
183	369
184	344
185	367
186	361
187	305
188	351
189	354
190	302
191	335
192	325
193	307
194	301
195	294
196	274
197	262
198	248
199	259
200	263
201	249
202	269
203	241
204	239
205	257
206	246
207	224
208	245
209	236
210	219
211	221
212	241
213	253
214	213
215	234
216	219
217	245
218	230
219	198
220	184
221	236
222	194
223	185
224	204
225	200
226	188
227	167
228	182
229	165
230	185
231	160
232	160
233	183
234	194
235	172
236	162
237	188
238	161
239	152
240	180
241	145
242	133
243	155
244	151
245	141
246	137
247	150
248	142
249	158
250	11307