#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i HGDP/HGDP01073/HGDP01073.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP01073/QCmetrics/HGDP01073.WgsMetrics.chrY.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
23636355	23.634	26.244	20	4	0	0.045807	0.0018281	0.063111	0.0077853	0.34223	0.46076	0.99856	0.99487	0.97562	0.84486	0.50167	0.19247	0.076358	0.043307	0.035604	0.030319	0.025604	0.021328	0.018163	0.016073	0.9956	24	

coverage	high_quality_coverage_count	
0	34067
1	19552
2	18496
3	21765
4	27490
5	36251
6	50522
7	75758
8	114543
9	177797
10	272267
11	404165
12	578917
13	796451
14	1038841
15	1284118
16	1509634
17	1689064
18	1798449
19	1830511
20	1780217
21	1661132
22	1494651
23	1293975
24	1078326
25	873383
26	683509
27	517884
28	386658
29	283131
30	206976
31	149474
32	108577
33	79747
34	60538
35	47788
36	39417
37	33560
38	29272
39	25862
40	23860
41	21943
42	20065
43	18909
44	17989
45	17440
46	16696
47	15715
48	14993
49	14452
50	13634
51	13352
52	12917
53	12451
54	12385
55	12150
56	12226
57	12009
58	11985
59	11810
60	11654
61	11506
62	11329
63	11240
64	11352
65	10960
66	10982
67	10935
68	10871
69	10631
70	10743
71	10932
72	10548
73	10486
74	10370
75	10266
76	9825
77	9532
78	9203
79	9167
80	8688
81	8576
82	8238
83	8043
84	7602
85	7142
86	7038
87	6662
88	6587
89	6227
90	5936
91	5808
92	5291
93	5335
94	5009
95	4850
96	4674
97	4413
98	4236
99	3848
100	3726
101	3559
102	3368
103	3226
104	3124
105	2905
106	2905
107	2669
108	2599
109	2525
110	2421
111	2325
112	2179
113	2102
114	2064
115	1920
116	1856
117	1830
118	1823
119	1664
120	1576
121	1587
122	1527
123	1486
124	1523
125	1505
126	1397
127	1363
128	1274
129	1376
130	1293
131	1285
132	1225
133	1204
134	1210
135	1220
136	1148
137	1109
138	1122
139	1175
140	1050
141	1051
142	1062
143	1065
144	1019
145	1055
146	1046
147	978
148	963
149	962
150	1045
151	975
152	961
153	960
154	996
155	947
156	959
157	930
158	881
159	897
160	964
161	980
162	949
163	927
164	894
165	905
166	939
167	887
168	844
169	899
170	906
171	872
172	881
173	882
174	910
175	838
176	856
177	854
178	848
179	838
180	823
181	837
182	849
183	814
184	808
185	888
186	880
187	911
188	876
189	907
190	930
191	929
192	903
193	900
194	873
195	933
196	959
197	921
198	938
199	926
200	897
201	895
202	887
203	862
204	883
205	877
206	866
207	824
208	908
209	903
210	878
211	868
212	852
213	832
214	868
215	774
216	828
217	783
218	882
219	770
220	819
221	778
222	698
223	729
224	745
225	755
226	730
227	736
228	715
229	675
230	699
231	712
232	646
233	680
234	666
235	694
236	709
237	637
238	639
239	686
240	663
241	626
242	684
243	592
244	648
245	629
246	605
247	619
248	590
249	585
250	209503