#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP01094/HGDP01094.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP01094/QCmetrics/HGDP01094.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 16.585 6.0074 17 3 0 0.064228 0.00057787 0.045612 0.0065823 0.00010557 0.11711 0.99316 0.97901 0.91888 0.66135 0.27187 0.06023 0.010861 0.0026763 0.0013984 0.00085008 0.000585 0.00043544 0.00032391 0.0002424 0.98356 18 coverage high_quality_coverage_count 0 1040013 1 540123 2 494692 3 513103 4 604554 5 780160 6 1088592 7 1589299 8 2335005 9 3353537 10 4660752 11 6203636 12 7880120 13 9511487 14 10918481 15 11957154 16 12460887 17 12376222 18 11757905 19 10693767 20 9331271 21 7833092 22 6342399 23 4952556 24 3733730 25 2730720 26 1939616 27 1338393 28 902447 29 598487 30 391422 31 255714 32 171047 33 118032 34 84755 35 64093 36 50909 37 41426 38 36082 39 31557 40 28217 41 25659 42 23006 43 21228 44 19254 45 18068 46 16735 47 15278 48 14102 49 12844 50 11510 51 10706 52 9920 53 9258 54 8411 55 7876 56 7269 57 6687 58 6126 59 5640 60 5228 61 5024 62 4712 63 4492 64 4071 65 3841 66 3540 67 3313 68 3188 69 2914 70 2778 71 2669 72 2505 73 2426 74 2265 75 2190 76 2040 77 1983 78 1984 79 1911 80 1912 81 1905 82 1837 83 1730 84 1677 85 1626 86 1579 87 1672 88 1509 89 1517 90 1452 91 1382 92 1329 93 1255 94 1275 95 1256 96 1194 97 1100 98 1090 99 1067 100 978 101 956 102 935 103 887 104 912 105 807 106 815 107 809 108 799 109 812 110 784 111 737 112 710 113 677 114 653 115 617 116 574 117 537 118 510 119 430 120 466 121 407 122 370 123 397 124 357 125 328 126 369 127 341 128 344 129 308 130 365 131 301 132 306 133 334 134 315 135 283 136 310 137 296 138 282 139 252 140 267 141 290 142 286 143 284 144 248 145 266 146 246 147 236 148 206 149 237 150 199 151 204 152 192 153 174 154 206 155 176 156 195 157 164 158 175 159 164 160 166 161 168 162 163 163 164 164 176 165 148 166 153 167 164 168 151 169 146 170 154 171 123 172 163 173 174 174 147 175 138 176 122 177 146 178 137 179 152 180 152 181 153 182 150 183 123 184 113 185 102 186 112 187 128 188 95 189 86 190 106 191 98 192 73 193 83 194 81 195 78 196 83 197 81 198 88 199 93 200 80 201 78 202 71 203 82 204 68 205 63 206 78 207 105 208 70 209 67 210 86 211 82 212 84 213 92 214 72 215 77 216 90 217 86 218 72 219 68 220 79 221 65 222 63 223 74 224 64 225 66 226 52 227 58 228 55 229 54 230 47 231 62 232 48 233 57 234 56 235 44 236 54 237 64 238 54 239 44 240 41 241 54 242 57 243 41 244 41 245 45 246 36 247 41 248 40 249 47 250 2480