#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP01097/HGDP01097.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP01097/QCmetrics/HGDP01097.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 16.371 5.6868 16 3 0 0.042394 0.0044717 0.048764 0.0075037 0.00011791 0.10325 0.99628 0.98509 0.91672 0.63965 0.25541 0.056331 0.0099643 0.0019213 0.00091189 0.00054591 0.00038303 0.00028535 0.00022095 0.00017474 0.98772 19 coverage high_quality_coverage_count 0 566597 1 313569 2 356477 3 442664 4 588410 5 831094 6 1221054 7 1822125 8 2686826 9 3839342 10 5262182 11 6872217 12 8546686 13 10096115 14 11369090 15 12180609 16 12436198 17 12177394 18 11403142 19 10251343 20 8861364 21 7381108 22 5935093 23 4620572 24 3484262 25 2547262 26 1814320 27 1261079 28 857346 29 573081 30 381782 31 254150 32 171713 33 118473 34 84866 35 62837 36 49301 37 39423 38 32996 39 27918 40 24555 41 21524 42 19093 43 16980 44 15388 45 13590 46 12394 47 11220 48 9933 49 8873 50 8278 51 7434 52 6776 53 6149 54 5568 55 5040 56 4623 57 4303 58 3919 59 3581 60 3448 61 3155 62 2854 63 2561 64 2365 65 2282 66 2126 67 2035 68 2042 69 1908 70 1807 71 1738 72 1681 73 1569 74 1511 75 1455 76 1351 77 1280 78 1253 79 1213 80 1136 81 1101 82 1036 83 970 84 960 85 936 86 941 87 944 88 879 89 893 90 852 91 731 92 797 93 719 94 704 95 644 96 694 97 640 98 621 99 627 100 593 101 595 102 610 103 552 104 604 105 527 106 524 107 524 108 603 109 479 110 497 111 465 112 447 113 456 114 425 115 405 116 389 117 372 118 405 119 427 120 415 121 370 122 359 123 398 124 341 125 305 126 334 127 327 128 273 129 255 130 252 131 229 132 237 133 239 134 209 135 224 136 202 137 194 138 205 139 189 140 181 141 198 142 227 143 198 144 214 145 180 146 182 147 174 148 176 149 187 150 179 151 184 152 167 153 170 154 172 155 156 156 137 157 152 158 131 159 140 160 146 161 132 162 117 163 117 164 122 165 137 166 123 167 107 168 114 169 117 170 146 171 136 172 130 173 119 174 111 175 143 176 106 177 88 178 80 179 72 180 69 181 71 182 77 183 74 184 69 185 72 186 79 187 67 188 81 189 68 190 87 191 55 192 90 193 82 194 57 195 73 196 75 197 62 198 60 199 53 200 65 201 68 202 70 203 68 204 62 205 63 206 67 207 76 208 66 209 60 210 62 211 70 212 62 213 54 214 47 215 61 216 50 217 57 218 42 219 47 220 42 221 34 222 44 223 45 224 50 225 40 226 51 227 45 228 49 229 38 230 54 231 52 232 43 233 48 234 31 235 29 236 23 237 30 238 29 239 27 240 34 241 29 242 22 243 21 244 23 245 20 246 26 247 25 248 19 249 25 250 1571