#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta -i HGDP/HGDP01101/HGDP01101.cram --algo MeanQualityByCycle HGDP/HGDP01101/QCmetrics/HGDP01101.MeanQualityByCycle.txt CYCLE MEAN_QUALITY 1 31.270821 2 31.681783 3 36.142972 4 36.442581 5 36.616010 6 41.059149 7 41.220312 8 41.275495 9 41.302247 10 41.312197 11 41.310089 12 41.328258 13 41.304801 14 41.301286 15 41.307883 16 41.289354 17 41.290708 18 41.286514 19 41.279722 20 41.256407 21 41.269703 22 41.273811 23 41.198885 24 41.239132 25 41.222889 26 40.642729 27 41.112189 28 41.081745 29 41.059750 30 41.039966 31 40.987662 32 41.005255 33 40.983911 34 40.969682 35 40.956181 36 40.940918 37 40.931661 38 40.918846 39 40.903727 40 40.904108 41 40.881429 42 40.880354 43 40.867405 44 40.860402 45 40.841821 46 40.816205 47 40.813147 48 40.785577 49 40.786285 50 40.758255 51 40.745520 52 40.735392 53 40.723045 54 40.710325 55 40.686534 56 40.662669 57 40.633069 58 40.633933 59 40.618816 60 40.614570 61 40.591126 62 40.587773 63 40.561658 64 40.544174 65 40.482885 66 40.504345 67 40.491157 68 40.459275 69 40.453164 70 40.406308 71 40.408264 72 40.391963 73 40.342601 74 40.312823 75 40.312966 76 39.614310 77 40.054293 78 40.246585 79 40.312454 80 40.324157 81 40.316101 82 40.293054 83 40.284341 84 40.242864 85 40.241024 86 40.229473 87 40.203224 88 40.181587 89 40.164181 90 40.149817 91 40.123955 92 40.096725 93 40.066607 94 40.034192 95 40.004636 96 39.936794 97 39.960530 98 39.938233 99 39.903824 100 39.870889 101 39.853292 102 39.820749 103 39.778895 104 39.748490 105 39.718863 106 39.704476 107 39.678541 108 39.631355 109 39.579513 110 39.553066 111 39.527006 112 39.477272 113 39.437679 114 39.405935 115 39.361890 116 39.306168 117 39.276483 118 39.229171 119 39.197078 120 39.146468 121 39.102695 122 39.035047 123 38.960500 124 38.914104 125 38.874262 126 38.835977 127 38.792189 128 38.717233 129 38.644213 130 38.583257 131 38.488101 132 38.368260 133 38.294957 134 38.226568 135 38.171838 136 38.137495 137 38.064371 138 37.986690 139 37.910876 140 37.832886 141 37.715302 142 37.648090 143 37.553919 144 37.463808 145 37.372972 146 37.311331 147 37.198022 148 37.111786 149 37.022171 150 36.926046 151 34.052958 152 30.628008 153 31.190439 154 35.001702 155 35.857831 156 35.930817 157 40.210870 158 40.272402 159 40.410201 160 40.502428 161 40.545794 162 40.549255 163 40.538285 164 40.493749 165 40.460911 166 40.446909 167 40.379061 168 40.350110 169 40.315939 170 40.323496 171 40.292758 172 40.233329 173 40.205309 174 40.197065 175 40.153967 176 40.099066 177 40.101296 178 40.075853 179 40.062680 180 40.056718 181 40.000290 182 39.925975 183 39.934266 184 39.848925 185 39.869667 186 39.824214 187 39.734698 188 39.657960 189 39.679029 190 39.702585 191 39.675937 192 39.562889 193 39.565299 194 39.463671 195 39.400416 196 39.335228 197 39.298131 198 39.251325 199 39.204052 200 39.118219 201 39.090398 202 39.057302 203 39.030114 204 38.990426 205 38.952837 206 38.921748 207 38.860765 208 38.824273 209 38.727369 210 38.717329 211 38.717920 212 38.671929 213 38.672632 214 38.575953 215 38.556298 216 38.540923 217 38.506571 218 38.450312 219 38.425838 220 38.386636 221 38.382766 222 38.341044 223 38.291796 224 38.242357 225 38.225344 226 38.172767 227 36.876982 228 37.703090 229 38.072500 230 38.241651 231 38.302332 232 38.255735 233 38.232106 234 38.177848 235 38.171841 236 38.134770 237 38.099807 238 38.061214 239 37.970691 240 37.916406 241 37.881127 242 37.832309 243 37.758933 244 37.658904 245 37.618030 246 37.546167 247 37.499300 248 37.382713 249 37.308698 250 37.249280 251 37.136393 252 37.076514 253 36.971081 254 36.871049 255 36.776431 256 36.696474 257 36.611702 258 36.482310 259 36.383477 260 36.269551 261 36.186128 262 36.054550 263 35.953052 264 35.821043 265 35.667823 266 35.153224 267 35.371502 268 35.257385 269 35.106746 270 34.953664 271 34.839144 272 34.739132 273 34.598812 274 34.463730 275 34.339699 276 34.197416 277 34.016599 278 33.886604 279 33.738331 280 33.580900 281 33.413282 282 33.261190 283 33.088152 284 32.934482 285 32.787319 286 32.609296 287 32.457233 288 32.284902 289 32.117168 290 31.979335 291 31.825440 292 31.696725 293 31.518637 294 31.346472 295 31.191032 296 31.040220 297 30.869784 298 30.743095 299 30.543319 300 30.364442 301 30.185493 302 26.210008