#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP01151/HGDP01151.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP01151/QCmetrics/HGDP01151.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 17.377 5.4902 17 3 0 0.096924 0.0015595 0.044334 0.0025725 0.00015533 0.14555 0.99843 0.99313 0.95707 0.72488 0.30755 0.067195 0.011286 0.0022172 0.0010827 0.000658 0.00046105 0.00034573 0.00027195 0.0002185 0.99382 22 coverage high_quality_coverage_count 0 238323 1 172972 2 172932 3 205070 4 256362 5 359041 6 540991 7 869456 8 1422957 9 2292119 10 3528792 11 5119836 12 6983186 13 8931882 14 10755165 15 12211515 16 13102699 17 13328533 18 12917388 19 11922907 20 10528169 21 8903728 22 7224947 23 5648296 24 4255765 25 3105474 26 2198259 27 1513051 28 1017193 29 670620 30 439310 31 286980 32 191372 33 131421 34 93592 35 69720 36 54528 37 44429 38 36724 39 31372 40 27506 41 24302 42 21233 43 18984 44 17457 45 15690 46 13909 47 12139 48 11187 49 10162 50 8999 51 8485 52 7728 53 7200 54 6419 55 6109 56 5578 57 5037 58 4632 59 4418 60 4078 61 3978 62 3540 63 3274 64 2873 65 2856 66 2516 67 2435 68 2294 69 2114 70 2114 71 2037 72 1955 73 1843 74 1741 75 1718 76 1656 77 1570 78 1455 79 1453 80 1397 81 1348 82 1255 83 1224 84 1111 85 1020 86 1038 87 955 88 999 89 876 90 867 91 830 92 846 93 782 94 821 95 821 96 822 97 788 98 780 99 774 100 740 101 746 102 686 103 709 104 678 105 647 106 628 107 604 108 602 109 582 110 581 111 547 112 492 113 521 114 476 115 456 116 426 117 427 118 417 119 411 120 385 121 381 122 398 123 406 124 401 125 392 126 395 127 382 128 372 129 356 130 351 131 323 132 307 133 295 134 316 135 300 136 289 137 276 138 240 139 240 140 248 141 244 142 230 143 269 144 264 145 240 146 255 147 237 148 226 149 230 150 210 151 196 152 178 153 200 154 191 155 193 156 177 157 163 158 183 159 190 160 181 161 186 162 168 163 199 164 153 165 149 166 185 167 181 168 136 169 152 170 152 171 165 172 136 173 143 174 131 175 133 176 122 177 125 178 134 179 120 180 128 181 108 182 88 183 108 184 99 185 95 186 87 187 101 188 92 189 101 190 78 191 79 192 82 193 82 194 78 195 62 196 60 197 84 198 59 199 48 200 63 201 49 202 41 203 46 204 54 205 47 206 50 207 62 208 56 209 46 210 57 211 41 212 54 213 54 214 43 215 39 216 42 217 48 218 36 219 45 220 44 221 66 222 38 223 45 224 55 225 38 226 53 227 51 228 48 229 55 230 52 231 51 232 51 233 47 234 37 235 62 236 57 237 52 238 54 239 54 240 37 241 37 242 46 243 47 244 43 245 36 246 45 247 33 248 35 249 38 250 3582