#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP01183/HGDP01183.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP01183/QCmetrics/HGDP01183.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 15.622 5.0221 15 3 0 0.23634 0.0013595 0.025442 0.0028923 0.00010251 0.26613 0.9981 0.99114 0.92387 0.58334 0.17947 0.030025 0.0063512 0.0020144 0.0009235 0.00047059 0.00028402 0.00018822 0.00013529 0.00010044 0.99126 21 coverage high_quality_coverage_count 0 289367 1 220132 2 223970 3 260581 4 354117 5 550358 6 944472 7 1643850 8 2762201 9 4331016 10 6309631 11 8521647 12 10700684 13 12518148 14 13749366 15 14200024 16 13842665 17 12776111 18 11222938 19 9393336 20 7526096 21 5782787 22 4272144 23 3044492 24 2106921 25 1418241 26 932233 27 605464 28 390879 29 254358 30 169916 31 118324 32 85576 33 65349 34 51868 35 42938 36 37143 37 32802 38 29522 39 26257 40 23336 41 21511 42 19659 43 18050 44 16874 45 15588 46 14040 47 13242 48 12360 49 11279 50 10204 51 9290 52 8101 53 7633 54 6907 55 6250 56 5750 57 5309 58 4951 59 4499 60 4198 61 3747 62 3277 63 2911 64 2684 65 2551 66 2544 67 2305 68 2165 69 1999 70 1873 71 1812 72 1653 73 1655 74 1508 75 1382 76 1310 77 1144 78 1185 79 1050 80 1040 81 981 82 870 83 846 84 784 85 788 86 690 87 717 88 642 89 693 90 618 91 588 92 605 93 553 94 515 95 482 96 483 97 524 98 497 99 437 100 434 101 405 102 404 103 429 104 406 105 416 106 375 107 371 108 384 109 323 110 320 111 282 112 290 113 266 114 283 115 237 116 244 117 212 118 230 119 212 120 238 121 211 122 190 123 208 124 199 125 214 126 183 127 178 128 164 129 185 130 172 131 173 132 174 133 144 134 141 135 128 136 130 137 127 138 117 139 97 140 111 141 119 142 105 143 93 144 113 145 83 146 59 147 75 148 74 149 57 150 57 151 58 152 64 153 81 154 53 155 58 156 47 157 39 158 42 159 40 160 36 161 43 162 42 163 44 164 46 165 54 166 24 167 39 168 43 169 34 170 37 171 46 172 39 173 37 174 38 175 41 176 36 177 46 178 32 179 36 180 44 181 39 182 46 183 44 184 30 185 30 186 18 187 21 188 33 189 27 190 29 191 35 192 32 193 26 194 37 195 29 196 29 197 30 198 29 199 28 200 26 201 32 202 25 203 24 204 22 205 24 206 17 207 20 208 15 209 19 210 20 211 17 212 10 213 23 214 16 215 17 216 9 217 19 218 13 219 9 220 6 221 13 222 7 223 8 224 8 225 15 226 14 227 13 228 17 229 14 230 12 231 9 232 11 233 7 234 7 235 11 236 5 237 8 238 9 239 5 240 11 241 5 242 17 243 11 244 8 245 11 246 8 247 9 248 8 249 10 250 1851