#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP01280/HGDP01280.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP01280/QCmetrics/HGDP01280.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	35.636	8.6408	36	5	0	0.11702	0.0020539	0.037066	0.0024942	0.00018322	0.15882	0.99893	0.99508	0.9893	0.98232	0.97063	0.93214	0.81019	0.30264	0.033123	0.0029771	0.0013162	0.00084934	0.00059967	0.00045871	0.99723	26	

coverage	high_quality_coverage_count	
0	163419
1	140552
2	142904
3	146507
4	154575
5	161137
6	170546
7	177790
8	182122
9	187517
10	196334
11	201045
12	209915
13	221579
14	234060
15	255911
16	285207
17	334904
18	400399
19	501397
20	642495
21	835975
22	1094412
23	1428779
24	1853435
25	2367234
26	2968526
27	3650694
28	4392350
29	5171463
30	5940335
31	6683372
32	7336549
33	7884157
34	8270099
35	8491121
36	8528450
37	8387002
38	8070468
39	7613974
40	7050031
41	6397948
42	5700367
43	4991018
44	4288455
45	3618684
46	3000381
47	2443207
48	1958655
49	1548348
50	1203849
51	925807
52	703298
53	525049
54	388941
55	285841
56	209089
57	152460
58	110682
59	80669
60	59644
61	44288
62	33514
63	26270
64	20904
65	17268
66	15030
67	13171
68	11801
69	10756
70	9931
71	9001
72	8286
73	7753
74	7037
75	6509
76	6171
77	5707
78	5448
79	5166
80	4960
81	4664
82	4334
83	4116
84	3966
85	3618
86	3472
87	3169
88	2945
89	2734
90	2576
91	2453
92	2252
93	2205
94	2152
95	2061
96	2044
97	1989
98	1900
99	1810
100	1681
101	1684
102	1614
103	1475
104	1491
105	1396
106	1347
107	1265
108	1262
109	1169
110	1152
111	1061
112	989
113	932
114	875
115	849
116	817
117	824
118	749
119	762
120	756
121	738
122	769
123	725
124	654
125	679
126	646
127	647
128	597
129	619
130	605
131	593
132	544
133	536
134	499
135	509
136	449
137	450
138	481
139	442
140	425
141	419
142	422
143	382
144	369
145	385
146	390
147	362
148	362
149	373
150	396
151	369
152	391
153	352
154	355
155	312
156	329
157	357
158	343
159	355
160	387
161	334
162	329
163	317
164	314
165	316
166	295
167	299
168	309
169	322
170	280
171	286
172	248
173	287
174	254
175	272
176	231
177	244
178	244
179	252
180	250
181	246
182	254
183	250
184	263
185	233
186	242
187	242
188	241
189	236
190	212
191	220
192	203
193	235
194	198
195	197
196	219
197	209
198	201
199	224
200	204
201	216
202	240
203	212
204	212
205	204
206	209
207	197
208	228
209	220
210	205
211	191
212	188
213	196
214	181
215	191
216	186
217	171
218	184
219	159
220	145
221	166
222	160
223	142
224	162
225	144
226	115
227	110
228	136
229	142
230	154
231	134
232	125
233	140
234	115
235	106
236	99
237	129
238	98
239	120
240	122
241	120
242	123
243	112
244	110
245	97
246	112
247	103
248	110
249	107
250	8850