#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP01330/HGDP01330.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP01330/QCmetrics/HGDP01330.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 14.411 4.9549 14 3 0 0.239 0.0013974 0.025997 0.0030496 5.3387e-05 0.2695 0.99809 0.99038 0.88324 0.46351 0.10882 0.017724 0.0062169 0.002361 0.0010854 0.00058622 0.0003544 0.00023192 0.00016551 0.0001234 0.98877 19 coverage high_quality_coverage_count 0 290563 1 206290 2 219353 3 283697 4 463221 5 849816 6 1566130 7 2744286 8 4464418 9 6672568 10 9137138 11 11548122 12 13508583 13 14696802 14 14956821 15 14284852 16 12879916 17 10991303 18 8913140 19 6884523 20 5082711 21 3608154 22 2470161 23 1635353 24 1060364 25 683424 26 440640 27 289038 28 195371 29 141906 30 107928 31 86158 32 72175 33 62471 34 55193 35 49367 36 44429 37 40114 38 36158 39 32546 40 29566 41 26846 42 24247 43 21978 44 19864 45 17667 46 15883 47 13840 48 12693 49 11454 50 10400 51 9621 52 9035 53 8452 54 7748 55 7003 56 6599 57 5987 58 5792 59 5290 60 4939 61 4656 62 4292 63 4085 64 3528 65 3162 66 2907 67 2702 68 2539 69 2453 70 2340 71 2149 72 2110 73 1953 74 1885 75 1796 76 1750 77 1588 78 1584 79 1477 80 1385 81 1278 82 1153 83 1082 84 1004 85 939 86 882 87 878 88 790 89 710 90 677 91 694 92 745 93 690 94 653 95 586 96 582 97 586 98 598 99 595 100 572 101 524 102 551 103 519 104 498 105 431 106 458 107 435 108 422 109 420 110 381 111 398 112 367 113 329 114 348 115 341 116 305 117 283 118 268 119 252 120 234 121 222 122 231 123 162 124 199 125 200 126 204 127 177 128 195 129 185 130 176 131 155 132 157 133 181 134 149 135 144 136 173 137 135 138 161 139 160 140 146 141 123 142 157 143 148 144 130 145 124 146 136 147 119 148 133 149 117 150 121 151 133 152 135 153 104 154 105 155 102 156 116 157 95 158 124 159 96 160 112 161 98 162 89 163 92 164 83 165 67 166 94 167 61 168 75 169 63 170 62 171 66 172 57 173 56 174 56 175 47 176 46 177 51 178 55 179 53 180 51 181 52 182 46 183 55 184 54 185 46 186 32 187 44 188 43 189 44 190 28 191 33 192 37 193 48 194 34 195 45 196 33 197 38 198 36 199 41 200 39 201 27 202 40 203 34 204 36 205 41 206 32 207 29 208 30 209 32 210 28 211 32 212 35 213 31 214 34 215 30 216 33 217 29 218 34 219 23 220 25 221 23 222 28 223 17 224 36 225 30 226 21 227 19 228 20 229 27 230 26 231 21 232 24 233 17 234 24 235 15 236 14 237 22 238 15 239 17 240 18 241 21 242 23 243 24 244 17 245 26 246 23 247 37 248 24 249 14 250 1065