#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.autosome-PAR.interval_list -i HGDP/HGDP01351/HGDP01351.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP01351/QCmetrics/HGDP01351.WgsMetrics.autosome.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 2747965384 31.606 11.276 31 4 0 0.24239 0.0012757 0.028261 0.0042087 0.014729 0.29087 0.99872 0.99608 0.99298 0.98731 0.96441 0.85873 0.59911 0.096156 0.012575 0.0075144 0.0055824 0.004441 0.0036796 0.003118 0.99764 26 coverage high_quality_coverage_count 0 3517428 1 2215955 2 1814024 3 1652385 4 1581595 5 1568929 6 1592823 7 1660873 8 1761191 9 1927142 10 2158060 11 2464746 12 2916943 13 3556298 14 4493524 15 5897568 16 8005727 17 11155686 18 15724120 19 22141939 20 30799650 21 41976541 22 55751306 23 71929522 24 89934545 25 108966907 26 127861897 27 145359070 28 160158879 29 171096844 30 177464093 31 178718040 32 174983651 33 166661941 34 154514614 35 139607224 36 122950934 37 105675944 38 88716201 39 72796602 40 58440947 41 45968034 42 35458909 43 26877741 44 20029042 45 14730866 46 10728690 47 7754987 48 5608214 49 4080698 50 3012304 51 2274304 52 1765877 53 1421523 54 1188049 55 1027118 56 911569 57 827694 58 765200 59 712902 60 667861 61 632802 62 599664 63 568060 64 540714 65 511657 66 483450 67 457896 68 435356 69 411704 70 389712 71 369196 72 349867 73 333131 74 316174 75 300212 76 287483 77 275172 78 262826 79 252699 80 243481 81 233794 82 225785 83 217912 84 210828 85 203817 86 196978 87 192028 88 186765 89 181042 90 175275 91 171143 92 165311 93 160538 94 156480 95 151314 96 146444 97 143138 98 138409 99 134965 100 131975 101 128616 102 125900 103 122536 104 119385 105 115532 106 112737 107 110741 108 106513 109 104023 110 100587 111 98566 112 95749 113 92806 114 90602 115 87890 116 86229 117 84222 118 81806 119 80364 120 78300 121 76072 122 74419 123 72557 124 71111 125 69014 126 68076 127 67052 128 65482 129 63959 130 62767 131 60935 132 59658 133 58675 134 58032 135 56987 136 55691 137 54511 138 53571 139 52443 140 51133 141 50092 142 49214 143 48607 144 47922 145 46844 146 45972 147 45332 148 44718 149 44034 150 43326 151 42675 152 42354 153 41786 154 41228 155 40265 156 39686 157 39311 158 38919 159 38346 160 37701 161 36866 162 36672 163 36414 164 35169 165 35372 166 35479 167 34876 168 34134 169 33856 170 33530 171 33133 172 32370 173 31874 174 31611 175 30872 176 30646 177 30135 178 30006 179 29399 180 29101 181 28794 182 28195 183 27921 184 27784 185 27102 186 27054 187 26895 188 26440 189 26337 190 25453 191 25389 192 24947 193 24815 194 24288 195 24154 196 24047 197 23827 198 23458 199 23147 200 22703 201 22307 202 22126 203 21677 204 21693 205 21406 206 20916 207 21082 208 20664 209 20595 210 20172 211 19811 212 19404 213 19488 214 18952 215 18781 216 18706 217 18447 218 17992 219 17991 220 17618 221 17429 222 17119 223 16935 224 16881 225 16430 226 16606 227 16172 228 16049 229 15829 230 15852 231 15577 232 15310 233 14995 234 14971 235 15014 236 14728 237 14415 238 14352 239 14014 240 14193 241 14045 242 13747 243 13450 244 13570 245 13511 246 13087 247 13061 248 13158 249 12841 250 2285282