#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP01367/HGDP01367.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP01367/QCmetrics/HGDP01367.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	26.719	7.5743	26	4	0	0.078757	0.0013273	0.040475	0.0021255	0.00041431	0.1231	0.9988	0.99589	0.9913	0.97612	0.88924	0.633	0.30181	0.023885	0.0052548	0.0030625	0.0019891	0.0013428	0.00095166	0.00070703	0.99746	26	

coverage	high_quality_coverage_count	
0	181928
1	121230
2	107045
3	107087
4	108323
5	115031
6	122048
7	132027
8	150753
9	177343
10	217987
11	287367
12	398294
13	570164
14	835360
15	1220755
16	1758919
17	2466634
18	3359294
19	4410330
20	5566459
21	6762015
22	7926537
23	8956865
24	9766339
25	10285845
26	10501972
27	10381287
28	9954108
29	9255713
30	8367190
31	7355853
32	6295599
33	5251627
34	4269423
35	3405964
36	2653316
37	2029890
38	1523328
39	1123905
40	816215
41	585564
42	418605
43	299217
44	215237
45	158181
46	118851
47	91023
48	71216
49	59743
50	50770
51	44429
52	39579
53	35930
54	32917
55	30415
56	27904
57	25772
58	23645
59	22122
60	20594
61	19638
62	18638
63	17277
64	16652
65	15767
66	14779
67	13960
68	13222
69	12756
70	12126
71	11567
72	10883
73	10406
74	9981
75	9602
76	9102
77	8789
78	8143
79	7706
80	7224
81	7047
82	6546
83	6276
84	5985
85	5798
86	5528
87	5327
88	4956
89	4816
90	4452
91	4429
92	4211
93	4025
94	3743
95	3584
96	3359
97	3338
98	3103
99	2968
100	2853
101	2818
102	2531
103	2567
104	2542
105	2363
106	2242
107	2262
108	2147
109	2159
110	2057
111	1947
112	1830
113	1809
114	1646
115	1589
116	1513
117	1446
118	1359
119	1335
120	1239
121	1222
122	1175
123	1207
124	1118
125	1048
126	1096
127	1082
128	983
129	978
130	1026
131	905
132	909
133	956
134	798
135	871
136	885
137	862
138	869
139	830
140	798
141	794
142	668
143	690
144	688
145	645
146	640
147	640
148	573
149	565
150	572
151	599
152	546
153	560
154	513
155	531
156	520
157	498
158	549
159	482
160	465
161	463
162	449
163	425
164	387
165	415
166	368
167	423
168	422
169	380
170	362
171	371
172	400
173	348
174	377
175	350
176	371
177	371
178	330
179	373
180	341
181	340
182	338
183	348
184	316
185	296
186	296
187	293
188	307
189	322
190	284
191	281
192	267
193	252
194	243
195	269
196	263
197	260
198	260
199	252
200	245
201	257
202	248
203	303
204	256
205	244
206	267
207	240
208	226
209	236
210	217
211	218
212	208
213	208
214	183
215	207
216	189
217	177
218	185
219	188
220	184
221	194
222	165
223	168
224	154
225	169
226	160
227	159
228	150
229	180
230	154
231	165
232	147
233	138
234	121
235	145
236	123
237	137
238	144
239	125
240	135
241	155
242	153
243	148
244	148
245	156
246	139
247	129
248	128
249	100
250	11751