#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i HGDP/HGDP01403/HGDP01403.cram --algo WgsMetricsAlgo --min_map_qual 0 HGDP/HGDP01403/QCmetrics/HGDP01403.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 15.934 5.2011 16 3 0 0.13919 0.0026298 0.047046 0.0027356 0.00011575 0.19172 0.9981 0.99121 0.92909 0.60979 0.20227 0.035999 0.0071257 0.0019605 0.00094502 0.00056312 0.00038215 0.00027991 0.00020556 0.00015388 0.99146 21 coverage high_quality_coverage_count 0 289734 1 229111 2 222003 3 256419 4 339147 5 527081 6 890574 7 1532579 8 2538928 9 3960444 10 5773700 11 7851877 12 9956859 13 11821094 14 13166745 15 13828599 16 13738053 17 12932790 18 11577273 19 9912643 20 8122186 21 6374452 22 4816405 23 3505308 24 2474354 25 1699667 26 1137343 27 749092 28 487251 29 318713 30 211710 31 143196 32 102931 33 77036 34 61524 35 49983 36 41805 37 36589 38 32443 39 28485 40 25059 41 22173 42 19597 43 17170 44 15074 45 13455 46 11975 47 10923 48 9889 49 9149 50 8378 51 7699 52 6995 53 6356 54 5889 55 5369 56 4851 57 4522 58 4100 59 3934 60 3610 61 3366 62 3196 63 3080 64 3016 65 2747 66 2401 67 2241 68 2020 69 1850 70 1709 71 1689 72 1620 73 1581 74 1542 75 1566 76 1511 77 1486 78 1444 79 1405 80 1313 81 1207 82 1218 83 1239 84 1099 85 1149 86 1062 87 1052 88 993 89 978 90 964 91 934 92 887 93 811 94 774 95 763 96 706 97 713 98 670 99 639 100 622 101 567 102 635 103 609 104 571 105 524 106 560 107 550 108 494 109 518 110 482 111 492 112 482 113 449 114 416 115 392 116 383 117 408 118 349 119 350 120 361 121 360 122 299 123 317 124 276 125 320 126 286 127 290 128 282 129 260 130 254 131 253 132 234 133 241 134 244 135 229 136 212 137 182 138 150 139 168 140 153 141 126 142 136 143 147 144 114 145 114 146 100 147 88 148 126 149 119 150 106 151 127 152 121 153 126 154 118 155 108 156 128 157 102 158 105 159 115 160 101 161 98 162 89 163 93 164 82 165 87 166 87 167 90 168 82 169 65 170 68 171 75 172 62 173 82 174 58 175 75 176 58 177 70 178 59 179 52 180 35 181 61 182 58 183 67 184 46 185 53 186 53 187 40 188 35 189 35 190 60 191 44 192 35 193 43 194 33 195 37 196 38 197 35 198 39 199 42 200 48 201 44 202 38 203 34 204 48 205 35 206 42 207 38 208 30 209 24 210 37 211 33 212 29 213 26 214 24 215 26 216 19 217 23 218 16 219 11 220 17 221 27 222 14 223 20 224 16 225 15 226 18 227 25 228 16 229 12 230 27 231 18 232 19 233 13 234 16 235 21 236 21 237 22 238 18 239 17 240 16 241 19 242 24 243 18 244 12 245 15 246 19 247 23 248 23 249 26 250 2343