#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005441-DNA_A09.hs38DH/LP6005441-DNA_A09.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_A09.hs38DH/QCmetrics/LP6005441-DNA_A09.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 21.018 6.0999 21 4 0 0.01914 0.004457 0.053466 0.0036919 0.00018478 0.080941 0.99927 0.99618 0.98249 0.8889 0.59599 0.24666 0.063678 0.0049795 0.0017744 0.00085766 0.0004909 0.00031583 0.00022108 0.00016112 0.99659 25 coverage high_quality_coverage_count 0 110932 1 91198 2 108547 3 122537 4 147218 5 185354 6 247351 7 349792 8 516896 9 783189 10 1190872 11 1798123 12 2625581 13 3679748 14 4942617 15 6343607 16 7778329 17 9132904 18 10246985 19 11053306 20 11445758 21 11408831 22 10971028 23 10186480 24 9126697 25 7923770 26 6687384 27 5471952 28 4366435 29 3384555 30 2566560 31 1905188 32 1384015 33 990139 34 697611 35 490763 36 344030 37 244663 38 176584 39 129364 40 99550 41 77337 42 63169 43 51939 44 44392 45 38329 46 33648 47 29439 48 26181 49 23548 50 21305 51 19061 52 17384 53 15258 54 13730 55 12741 56 11297 57 10540 58 9538 59 8599 60 7913 61 7171 62 6626 63 6130 64 5723 65 5258 66 4748 67 4316 68 4148 69 3757 70 3459 71 3233 72 3090 73 2868 74 2613 75 2661 76 2455 77 2176 78 2089 79 1986 80 1871 81 1681 82 1637 83 1551 84 1481 85 1320 86 1328 87 1261 88 1153 89 1131 90 1059 91 983 92 1011 93 974 94 959 95 936 96 864 97 841 98 785 99 709 100 763 101 707 102 643 103 636 104 575 105 536 106 527 107 501 108 504 109 464 110 465 111 462 112 467 113 458 114 421 115 413 116 379 117 337 118 323 119 355 120 323 121 354 122 307 123 300 124 261 125 250 126 254 127 258 128 234 129 233 130 202 131 204 132 218 133 193 134 169 135 172 136 190 137 216 138 167 139 171 140 167 141 172 142 166 143 154 144 146 145 124 146 135 147 133 148 128 149 127 150 146 151 122 152 117 153 118 154 110 155 127 156 126 157 106 158 107 159 93 160 102 161 80 162 89 163 70 164 101 165 75 166 65 167 90 168 64 169 69 170 74 171 77 172 64 173 59 174 63 175 48 176 51 177 69 178 75 179 75 180 76 181 75 182 63 183 67 184 46 185 47 186 54 187 56 188 34 189 50 190 50 191 50 192 46 193 57 194 48 195 54 196 48 197 62 198 46 199 46 200 40 201 48 202 43 203 45 204 31 205 42 206 41 207 37 208 37 209 69 210 58 211 47 212 47 213 28 214 54 215 40 216 51 217 35 218 37 219 25 220 38 221 32 222 38 223 33 224 34 225 33 226 33 227 34 228 36 229 38 230 39 231 40 232 40 233 39 234 50 235 43 236 42 237 31 238 44 239 43 240 49 241 52 242 38 243 34 244 31 245 39 246 41 247 41 248 29 249 26 250 2742