#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005441-DNA_B01.hs38DH/LP6005441-DNA_B01.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_B01.hs38DH/QCmetrics/LP6005441-DNA_B01.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 28.522 7.2424 28 4 0 0.011163 0.0012752 0.055361 0.0067373 4.0003e-05 0.074576 0.99937 0.99755 0.99351 0.98077 0.92265 0.73602 0.42805 0.046381 0.005211 0.0023021 0.0012379 0.00072422 0.00046407 0.00032225 0.99824 28 coverage high_quality_coverage_count 0 95887 1 61103 2 66722 3 70956 4 77515 5 88292 6 100186 7 116415 8 140213 9 169428 10 210615 11 269066 12 351935 13 468867 14 637282 15 877029 16 1207137 17 1641990 18 2210674 19 2904904 20 3729609 21 4657175 22 5660096 23 6685089 24 7657542 25 8511789 26 9190157 27 9630303 28 9806036 29 9707982 30 9357836 31 8787183 32 8039803 33 7173985 34 6255432 35 5315913 36 4426097 37 3595106 38 2865728 39 2240069 40 1715235 41 1294491 42 958586 43 701196 44 508451 45 368199 46 267553 47 194620 48 144708 49 109486 50 84233 51 67245 52 55242 53 46434 54 40812 55 35899 56 32520 57 29136 58 26643 59 24319 60 22100 61 20945 62 19444 63 17690 64 16485 65 15194 66 14106 67 12899 68 11987 69 11042 70 10307 71 9695 72 9015 73 8591 74 7936 75 7445 76 6984 77 6417 78 6114 79 5626 80 5286 81 5049 82 4727 83 4277 84 3995 85 3611 86 3334 87 3239 88 3125 89 2931 90 2755 91 2644 92 2372 93 2264 94 2139 95 2105 96 1985 97 1911 98 1717 99 1680 100 1602 101 1430 102 1473 103 1362 104 1267 105 1221 106 1193 107 1187 108 1073 109 983 110 943 111 903 112 859 113 827 114 829 115 790 116 746 117 754 118 655 119 644 120 607 121 550 122 590 123 569 124 560 125 523 126 508 127 529 128 523 129 499 130 472 131 421 132 430 133 391 134 404 135 418 136 403 137 401 138 382 139 399 140 379 141 401 142 378 143 342 144 354 145 330 146 309 147 301 148 285 149 262 150 241 151 233 152 255 153 236 154 240 155 226 156 219 157 232 158 229 159 255 160 216 161 196 162 208 163 185 164 187 165 172 166 193 167 208 168 207 169 157 170 184 171 186 172 173 173 182 174 217 175 166 176 193 177 186 178 191 179 174 180 170 181 160 182 154 183 173 184 154 185 165 186 144 187 155 188 167 189 126 190 142 191 171 192 150 193 134 194 123 195 127 196 111 197 126 198 103 199 111 200 106 201 110 202 104 203 94 204 94 205 107 206 98 207 85 208 91 209 98 210 88 211 90 212 93 213 110 214 100 215 104 216 101 217 94 218 85 219 72 220 85 221 82 222 67 223 87 224 63 225 97 226 73 227 72 228 64 229 64 230 70 231 70 232 72 233 54 234 60 235 84 236 54 237 65 238 53 239 47 240 66 241 71 242 53 243 54 244 50 245 67 246 55 247 48 248 46 249 48 250 2480