#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i SGDP/LP6005441-DNA_B01.hs38DH/LP6005441-DNA_B01.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_B01.hs38DH/QCmetrics/LP6005441-DNA_B01.hs38DH.WgsMetrics.chrY.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
23636355	2.1722	16.351	0	0	0	0.052172	0.0042808	0.053558	0.028903	0.39276	0.53167	0.13713	0.057818	0.031575	0.02213	0.017791	0.01527	0.013484	0.011124	0.0096999	0.0086265	0.007804	0.0071553	0.0065892	0.0060655	0.096289	0	

coverage	high_quality_coverage_count	
0	20394989
1	839937
2	464652
3	321875
4	248307
5	186911
6	145019
7	116893
8	95165
9	76280
10	62535
11	51712
12	42722
13	35496
14	30790
15	26093
16	22782
17	19901
18	18099
19	15674
20	13832
21	12604
22	11740
23	11097
24	10329
25	9783
26	8876
27	8221
28	7753
29	7582
30	7067
31	6786
32	6436
33	6028
34	5596
35	5418
36	5118
37	4614
38	4545
39	4178
40	3899
41	3857
42	3704
43	3492
44	3395
45	3222
46	3145
47	3075
48	3008
49	2852
50	2858
51	2693
52	2671
53	2563
54	2554
55	2464
56	2455
57	2429
58	2357
59	2328
60	2222
61	2241
62	2002
63	1992
64	1991
65	1846
66	1886
67	1816
68	1777
69	1668
70	1635
71	1714
72	1586
73	1610
74	1555
75	1509
76	1477
77	1512
78	1341
79	1394
80	1410
81	1407
82	1370
83	1390
84	1377
85	1308
86	1290
87	1263
88	1257
89	1309
90	1264
91	1208
92	1276
93	1238
94	1244
95	1197
96	1189
97	1252
98	1260
99	1250
100	1239
101	1281
102	1232
103	1203
104	1242
105	1272
106	1283
107	1274
108	1274
109	1198
110	1306
111	1249
112	1227
113	1301
114	1267
115	1275
116	1164
117	1170
118	1041
119	1054
120	1042
121	1011
122	964
123	928
124	889
125	907
126	872
127	816
128	892
129	858
130	833
131	812
132	850
133	827
134	833
135	817
136	781
137	782
138	781
139	783
140	793
141	759
142	796
143	773
144	762
145	773
146	822
147	786
148	790
149	726
150	725
151	761
152	743
153	636
154	683
155	627
156	605
157	676
158	572
159	654
160	607
161	549
162	562
163	552
164	541
165	515
166	516
167	489
168	506
169	482
170	504
171	517
172	484
173	444
174	446
175	404
176	415
177	425
178	400
179	360
180	345
181	393
182	363
183	378
184	339
185	345
186	369
187	312
188	351
189	347
190	330
191	349
192	286
193	309
194	318
195	328
196	320
197	291
198	288
199	301
200	276
201	268
202	273
203	262
204	262
205	275
206	268
207	230
208	262
209	247
210	250
211	254
212	223
213	257
214	253
215	244
216	208
217	208
218	193
219	221
220	220
221	219
222	218
223	219
224	219
225	221
226	241
227	227
228	216
229	229
230	217
231	208
232	236
233	235
234	219
235	222
236	182
237	219
238	201
239	197
240	221
241	192
242	205
243	207
244	193
245	177
246	215
247	206
248	212
249	144
250	59423