#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005441-DNA_B02.hs38DH/LP6005441-DNA_B02.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_B02.hs38DH/QCmetrics/LP6005441-DNA_B02.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 33.891 7.922 34 4 0 0.011438 0.0017389 0.03651 0.0060939 4.7865e-05 0.055829 0.99921 0.99674 0.99245 0.98581 0.9709 0.91621 0.7502 0.20258 0.015051 0.0028947 0.0016857 0.0010691 0.00071267 0.00050191 0.99785 27 coverage high_quality_coverage_count 0 119862 1 82551 2 90475 3 98056 4 105512 5 114380 6 119789 7 129640 8 138148 9 150182 10 162370 11 177618 12 197353 13 221443 14 250583 15 289736 16 342965 17 420515 18 530573 19 685131 20 895921 21 1181245 22 1559177 23 2043664 24 2638219 25 3347691 26 4152182 27 5022267 28 5923818 29 6806646 30 7612445 31 8292491 32 8813656 33 9128476 34 9226640 35 9083323 36 8727276 37 8181861 38 7502929 39 6731947 40 5900079 41 5052265 42 4249221 43 3493617 44 2817314 45 2232920 46 1731210 47 1323789 48 993625 49 732063 50 535522 51 385767 52 276411 53 198204 54 142308 55 101869 56 75405 57 56110 58 43251 59 34317 60 28436 61 24226 62 21366 63 19264 64 18006 65 16636 66 15483 67 14391 68 13506 69 12589 70 12209 71 11286 72 10862 73 10081 74 9636 75 8866 76 8380 77 7951 78 7506 79 7007 80 6676 81 6339 82 6082 83 5794 84 5582 85 5239 86 4984 87 4882 88 4430 89 4215 90 3920 91 3750 92 3477 93 3330 94 3362 95 3136 96 3002 97 2777 98 2677 99 2630 100 2458 101 2387 102 2127 103 2081 104 2035 105 1872 106 1802 107 1777 108 1706 109 1603 110 1567 111 1471 112 1311 113 1304 114 1333 115 1200 116 1173 117 1176 118 1114 119 1063 120 995 121 993 122 1006 123 962 124 880 125 932 126 966 127 870 128 870 129 861 130 859 131 807 132 835 133 810 134 725 135 702 136 736 137 705 138 725 139 663 140 635 141 666 142 597 143 599 144 646 145 596 146 585 147 552 148 547 149 537 150 485 151 463 152 498 153 462 154 477 155 431 156 415 157 370 158 424 159 364 160 381 161 378 162 356 163 323 164 343 165 319 166 306 167 314 168 280 169 266 170 274 171 280 172 256 173 255 174 243 175 240 176 217 177 200 178 219 179 181 180 191 181 174 182 211 183 221 184 182 185 213 186 213 187 183 188 214 189 203 190 200 191 189 192 192 193 186 194 186 195 178 196 154 197 152 198 177 199 177 200 144 201 149 202 155 203 127 204 124 205 144 206 128 207 128 208 119 209 127 210 123 211 117 212 136 213 111 214 110 215 105 216 86 217 87 218 81 219 95 220 89 221 71 222 67 223 63 224 65 225 57 226 75 227 63 228 56 229 58 230 58 231 62 232 63 233 91 234 52 235 82 236 67 237 46 238 56 239 52 240 49 241 52 242 49 243 47 244 44 245 49 246 37 247 63 248 44 249 50 250 2936