#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i SGDP/LP6005441-DNA_B02.hs38DH/LP6005441-DNA_B02.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_B02.hs38DH/QCmetrics/LP6005441-DNA_B02.hs38DH.WgsMetrics.chrY.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
23636355	2.4012	17.17	0	0	0	0.064962	0.0038773	0.035171	0.028645	0.41738	0.55004	0.14633	0.068196	0.037547	0.024792	0.018938	0.015973	0.013967	0.011447	0.010014	0.009108	0.0083342	0.0076398	0.007074	0.0065731	0.10763	0	

coverage	high_quality_coverage_count	
0	20177711
1	783837
2	462674
3	339260
4	260964
5	205445
6	168455
7	139589
8	115509
9	95438
10	81602
11	68277
12	57399
13	49887
14	44317
15	36964
16	31056
17	26859
18	23582
19	19909
20	17354
21	15449
22	13640
23	12284
24	11358
25	10773
26	10056
27	9263
28	8798
29	8523
30	8015
31	7438
32	6910
33	6248
34	5913
35	5528
36	5454
37	5026
38	4643
39	4377
40	4203
41	4019
42	3869
43	3617
44	3512
45	3402
46	3077
47	2828
48	2719
49	2619
50	2448
51	2280
52	2157
53	2171
54	2073
55	2150
56	2128
57	2076
58	2048
59	1894
60	1969
61	1888
62	1925
63	1815
64	1773
65	1806
66	1807
67	1793
68	1727
69	1787
70	1756
71	1753
72	1751
73	1725
74	1755
75	1565
76	1603
77	1557
78	1526
79	1422
80	1393
81	1381
82	1367
83	1419
84	1305
85	1310
86	1323
87	1354
88	1285
89	1238
90	1244
91	1327
92	1241
93	1224
94	1170
95	1143
96	1126
97	1189
98	1090
99	1086
100	1115
101	1078
102	1044
103	1006
104	951
105	942
106	837
107	909
108	902
109	943
110	958
111	925
112	971
113	961
114	898
115	933
116	887
117	878
118	907
119	895
120	824
121	775
122	842
123	850
124	856
125	899
126	844
127	871
128	891
129	881
130	906
131	872
132	856
133	864
134	796
135	917
136	818
137	853
138	812
139	816
140	806
141	849
142	830
143	822
144	908
145	828
146	943
147	881
148	885
149	858
150	861
151	854
152	797
153	836
154	848
155	837
156	802
157	828
158	847
159	878
160	849
161	856
162	832
163	823
164	784
165	827
166	719
167	789
168	738
169	735
170	762
171	689
172	680
173	623
174	622
175	616
176	631
177	595
178	565
179	591
180	569
181	515
182	556
183	505
184	535
185	523
186	545
187	539
188	529
189	551
190	494
191	509
192	553
193	520
194	489
195	487
196	454
197	459
198	426
199	405
200	391
201	367
202	376
203	387
204	377
205	382
206	358
207	364
208	333
209	384
210	321
211	352
212	335
213	344
214	334
215	314
216	299
217	295
218	284
219	289
220	286
221	274
222	267
223	302
224	274
225	253
226	248
227	239
228	263
229	283
230	259
231	256
232	278
233	234
234	257
235	265
236	211
237	243
238	224
239	255
240	224
241	235
242	228
243	245
244	188
245	227
246	218
247	216
248	197
249	218
250	63640