#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i SGDP/LP6005441-DNA_B04.hs38DH/LP6005441-DNA_B04.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_B04.hs38DH/QCmetrics/LP6005441-DNA_B04.hs38DH.WgsMetrics.chrY.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
23636355	2.3971	17.036	0	0	0	0.073197	0.0048571	0.051547	0.025382	0.39272	0.54771	0.14821	0.067196	0.037511	0.025245	0.019614	0.016455	0.014442	0.011824	0.010271	0.0091584	0.0083087	0.0076046	0.0070327	0.0065541	0.10672	0	

coverage	high_quality_coverage_count	
0	20133209
1	870969
2	464424
3	327731
4	251758
5	201254
6	162566
7	133494
8	110631
9	93701
10	78315
11	66114
12	56699
13	48127
14	40656
15	34509
16	29000
17	26103
18	23206
19	20291
20	18023
21	16417
22	14699
23	13222
24	12299
25	10948
26	9998
27	9238
28	8959
29	8441
30	7951
31	7255
32	7005
33	6684
34	6335
35	5983
36	5455
37	5341
38	5061
39	4815
40	4433
41	4367
42	4170
43	3738
44	3546
45	3435
46	3414
47	3348
48	3251
49	3000
50	2932
51	2942
52	2871
53	2682
54	2563
55	2601
56	2507
57	2573
58	2315
59	2309
60	2290
61	2216
62	1975
63	2031
64	1979
65	1953
66	2065
67	1851
68	1896
69	1828
70	1921
71	1786
72	1781
73	1747
74	1664
75	1617
76	1558
77	1539
78	1520
79	1510
80	1455
81	1454
82	1397
83	1416
84	1383
85	1327
86	1340
87	1246
88	1277
89	1223
90	1183
91	1213
92	1241
93	1196
94	1124
95	1091
96	1079
97	1067
98	1027
99	1090
100	1076
101	1055
102	1005
103	970
104	1016
105	935
106	971
107	1005
108	972
109	1006
110	985
111	914
112	1001
113	1009
114	919
115	959
116	964
117	947
118	973
119	927
120	908
121	997
122	912
123	932
124	963
125	954
126	990
127	993
128	990
129	1006
130	975
131	1052
132	1061
133	1041
134	957
135	1009
136	968
137	1035
138	1002
139	1011
140	1016
141	971
142	974
143	985
144	947
145	973
146	857
147	905
148	901
149	925
150	904
151	803
152	818
153	796
154	789
155	783
156	774
157	768
158	727
159	712
160	697
161	646
162	667
163	611
164	673
165	626
166	645
167	646
168	665
169	626
170	616
171	646
172	615
173	607
174	582
175	558
176	559
177	564
178	592
179	585
180	561
181	564
182	568
183	584
184	567
185	576
186	539
187	535
188	534
189	532
190	497
191	484
192	486
193	470
194	454
195	447
196	467
197	460
198	421
199	379
200	374
201	409
202	401
203	371
204	358
205	390
206	360
207	350
208	348
209	345
210	330
211	319
212	345
213	328
214	320
215	330
216	318
217	293
218	352
219	299
220	267
221	281
222	280
223	291
224	301
225	281
226	283
227	265
228	261
229	254
230	247
231	257
232	242
233	234
234	249
235	220
236	223
237	265
238	226
239	268
240	240
241	226
242	234
243	214
244	214
245	243
246	237
247	216
248	214
249	207
250	61292